Pregenerated sensors for MTREX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016018Ensembl transcript IDs: ENSMUST00000022281.5
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGACCATTCTATAAAGGACTGCTGCTATCTATACCTCCTGGATaGCCATTTTATGTGTGTACAGTTACTTCTAACACAATGAGTAAC | + |
|
Preference number: 1 (lower is better) Translates to: YRPFYKGLLLSIPPG*PFYVCTVTSNTMSN Trigger: GTTACTCATTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATAGCAGCAGTCCTTTATAGAATGGTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCTAAAGGCAGGGGGATaGGTATTACTTCCTGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TKRERKRIHTRLSMKPPVLKAGG*VLLPAV Trigger: TACAGCAGGAAGTAATACGCATCCCCCTGCCTTTAG...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGAATGTGTATGTTACATaGCTTCTCAGAATGATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ERKEEDPHTTLHETASSRNVYVT*LLRMML Trigger: CAACATCATTCTGAGAAGGCATGTAACATACACATT...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| 3UTR-3UTR GCA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTAGCGTTTGTAGTCAGTTaGAATCAGACAGGTGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PVTKTLSHLYIFIERRYVAFVVS*NQTGGG Trigger: TCCACCACCTGTCTGATTGCAACTGACTACAAACGC...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| 3UTR TCA 72 bp | AGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATaGAACCGCCAGTTCACGGAACTACTCAACCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: REKGRGSTHDSP*NRQFTELLNQS Trigger: TGATTGGTTGAGTAGTTCCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTAGCGTTTGTAGTCAGTaGCAATCAGACAGGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KTLSHLYIFIERRYVQMCSVCSQ*QSDRWW Trigger: CCACCACCTGTCTGATTGCAACTGACTACAAACGCT...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| 3UTR GCA 72 bp | TTCTATAAAGGACTGCTGCTATCTATACCTCCTGGATaGCCATTTTATGTGTGTACAGTTACTTCTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: FYKGLLLSIPPG*PFYVCTVTSNT Trigger: TGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATAGCAGCAGTCCTTTATAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGGCGCGACCAGACATCTaGATGTACTCGCCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERKEEDPHTTLHETASSRARPDI*MYSPEE Trigger: TTCCTCTGGCGAGTACATCCAGATGTCTGGTCGCGC...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGTTTGGCCAAATCACCTaGATCCCGCAGCACTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEEDPHTTLHETASSRFGQIT*IPQHLH Trigger: ATGCAAGTGCTGCGGGATGCAGGTGATTTGGCCAAA...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCCTCGTCTGGCTTCGCTaGCTTTGCTGCCTCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSYKERKEEDPHTTLHETLVWLR*LCCLGG Trigger: GCCACCGAGGCAGCAAAGCCAGCGAAGCCAGACGAG...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGATGGCTTTTGCTGCTTaGCACATCTGTCGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEEDPHTTLHETASSRMAFAA*HICRSS Trigger: ACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCAT...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCTTGTCTGCAGACCCTaGTGGCCCCTTCCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRERKRIHTRLSMKPPVLVCRP*WPLPFL Trigger: GAGAAATGGAAGGGGCCACCAGGGTCTGCAGACAAG...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGGGCTGTTTATGTAGGTaGCAAATCCATTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERKEEDPHTTLHETASSRGCLCR*QIHSAN Trigger: GTTTGCTGAATGGATTTGTCACCTACATAAACAGCC...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGTATGTAGTGTTGCAGTaGAGTGGGTCGATAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEEDPHTTLHETASSRYVVLQ*SGSIIS Trigger: ACTGATTATCGACCCACTCCACTGCAACACTACATA...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTGCCATCTCCCCCTGCTaGAAATATGTAGTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKRERKRIHTRLSMKPPVAISPC*KYVVLQ Trigger: CTGCAACACTACATATTTCCAGCAGGGGGAGATGGC...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTTGCGGTTGCCTGCTCTaGAGAAAGGTCATTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKRERKRIHTRLSMKPPVCGCLL*RKVIEK Trigger: CTTTTCAATGACCTTTCTTCAGAGCAGGCAACCGCA...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | ACACACATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGCCTTCTGGTCTCCTTTaGCCAAATCACCTGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: THILTKRERKRIHTRLSMPSGLL*PNHLHP Trigger: GGGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGG...CATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACCACTGACTGTACCTTaGCTCTGGGCATCAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PVTKTLSHLYIFIERRYVPLTVP*LWASGP Trigger: CGGACCTGATGCCCAGAGTCAAGGTACAGTCAGTGG...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTATCATCAACCACCAGGTaGAGGCCATCTCCCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVTKTLSHLYIFIERRYVSSTTR*RPSPPA Trigger: AGCAGGGGGAGATGGCCTTCACCTGGTGGTTGATGA...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGTCATCTTCACAATCTTaGACACATTTGATGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEEDPHTTLHETASSRSSSQS*THLMDL Trigger: AAGGTCCATCAAATGTGTTCAAGATTGTGAAGATGA...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | ACACACATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGGTCTTTCTTGGCTCCTaGTGCAGAGGTCGAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: THILTKRERKRIHTRLSMVFLGS*CRGRII Trigger: GATGATTCGACCTCTGCAGCAGGAGCCAAGAAAGAC...CATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAATTTCCCGGCCTTGTCTaGAGACCCTGGTGGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQFPGLV*RPWWPL Trigger: AAGGGGCCACCAGGGTCTGCAGACAAGGCCGGGAAA...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | ACACACATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGGAGCGACCTCATGTGTaGAGCCTTCAACTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: THILTKRERKRIHTRLSMERPHV*SLQLFP Trigger: TGGAAACAGTTGAAGGCTGCACACATGAGGTCGCTC...CATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCTCTTCAGGCTTTCCTTaGTACAGCGCAGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: HSYKERKEEDPHTTLHETSSGFP*YSAGGL Trigger: AAGTCCTCCTGCGCTGTAGCAAGGAAAGCCTGAAGA...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGTATCAACACACTGAATaGCTTCTCTTTGGAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEEDPHTTLHETASSRYQHTE*LLFGKH Trigger: ATGCTTTCCAAAGAGAAGCCATTCAGTGTGTTGATA...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCCCCCCGCTTCAAAAGTaGAAGCACATGTTCAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSYKERKEEDPHTTLHETPPLQK*KHMFNL Trigger: CAGGTTGAACATGTGCTTCCACTTTTGAAGCGGGGG...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTTACGACCCCTGGAATTaGTCTATAATGCTGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TKRERKRIHTRLSMKPPVYDPWN*SIMLKL Trigger: CAGTTTCAGCATTATAGAGCAATTCCAGGGGTCGTA...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTGAATTTCATCAAATATaGCCCAAGCAACTTCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRERKRIHTRLSMKPPVEFHQI*PKQLLA Trigger: TGCGAGAAGTTGCTTGGGTCATATTTGATGAAATTC...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTAGTTCAGAGGATCAGCTaGCCCCTTAAGCAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVTKTLSHLYIFIERRYVVQRIS*PLKQLL Trigger: AAGCAGCTGCTTAAGGGGTCAGCTGATCCTCTGAAC...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | GACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGACTTATGCTGCCTCGGTGGCTaGGTTCTTCAGGCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DAMYKCVCYMPSQNDVDLCCLGG*VLQAFL Trigger: AAGGAAAGCCTGAAGAACTCAGCCACCGAGGCAGCA...TAAGTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | ACACACATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGCCATCAGGTGAGGCTTaGATGAGCTTAGGTAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: THILTKRERKRIHTRLSMPSGEA*MSLGKF Trigger: AAACTTACCTAAGCTCATTCAAGCCTCACCTGATGG...CATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCTTGAGCTCGTCCATTTaGAGAACAGTTCTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSYKERKEEDPHTTLHETLSSSI*RTVLAF Trigger: GAAGGCAAGAACTGTTCTGCAAATGGACGAGCTCAA...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | ACACACATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGGTCATTTTGCAGATATaGGCAAATGTGGCCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: THILTKRERKRIHTRLSMVILQI*ANVAPV Trigger: AACTGGGGCCACATTTGCCCATATCTGCAAAATGAC...CATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTATCAGCCCCACATCTTaGAATTCTTCATACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRERKRIHTRLSMKPPVISPTS*NSSYIS Trigger: TGAAATGTATGAAGAATTTCAAGATGTGGGGCTGAT...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | ACACACATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGCAGAGGAAATCCATCTaGAGTCCTTTCCGTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: THILTKRERKRIHTRLSMQRKSI*SPFRHI Trigger: AATATGACGGAAAGGACTTCAGATGGATTTCCTCTG...CATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCCAGCTTTGCCTCTGCTaGAACTTTTGCAATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSYKERKEEDPHTTLHETQLCLC*NFCNPF Trigger: AAAAGGATTGCAAAAGTTTCAGCAGAGGCAAAGCTG...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTCATGCCTCTCCTTCCTaGGCGACCAGACATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLSHLYIFIERRYVQMCHASPS*ATRHLD Trigger: ATCCAGATGTCTGGTCGCGCAGGAAGGAGAGGCATG...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | GACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGACTTAGTCTGCAGACCCTGGTaGCCCCTTCCATTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DAMYKCVCYMPSQNDVDLVCRPW*PLPFLF Trigger: AAAGAGAAATGGAAGGGGCCACCAGGGTCTGCAGAC...TAAGTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCAAGGCCTCTACTTTCTaGATGACTTTCTTCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSYKERKEEDPHTTLHETKASTF*MTFFSP Trigger: AGGACTGAAGAAAGTCATCCAGAAAGTAGAGGCCTT...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTAAGTGGTCCAGCTAACTaGTCTGTTAGTTTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PVTKTLSHLYIFIERRYVSGPAN*SVSLGI Trigger: GATGCCCAAACTAACAGAGCAGTTAGCTGGACCACT...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGTCTCTTTGTCTTTCTTaGCTCCTGCTGCAGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSRLCMYPISSRTHILTKSLCLS*LLLQRS Trigger: CGACCTCTGCAGCAGGAGCCAAGAAAGACAAAGAGA...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCAGCATCAAGAATGAATaGGTATTCCTTTGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSYKERKEEDPHTTLHETSIKNE*VFLCCL Trigger: AAGGCAGCAAAGGAATACCCATTCATTCTTGATGCT...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAACCTTTCCGTCCCTTCTaGTCTCCTTTGGCCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQPFRPF*SPLAKS Trigger: TGATTTGGCCAAAGGAGACCAGAAGGGACGGAAAGG...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAAGAGATGCACCAAAACTaGAACAACCTGCATCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQEMHQN*NNLHLP Trigger: GGGGAGATGCAGGTTGTTCCAGTTTTGGTGCATCTC...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTTTCCCTGCTGACGTATaGGCAGATACTAGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSHLYIFIERRYVQMCFPADV*ADTSTD Trigger: GTCTGTGCTAGTATCTGCTCATACGTCAGCAGGGAA...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGGTCCTTTCATCTCTATaGCATCCGACGATGTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSRLCMYPISSRTHILTKVLSSL*HPTMSQ Trigger: TTGCGACATCGTCGGATGTCATAGAGATGAAAGGAC...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGAAGGCCATCTCCCCCTaGTGGAAATATGTAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRLCMYPISSRTHILTKKAISP*WKYVVL Trigger: CAACACTACATATTTCCAGCAGGGGGAGATGGCCTT...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAAAACAGTGCGGTTGCCTaGTCTGAAGAAAGGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQNSAVA*SEERSL Trigger: CAATGACCTTTCTTCAGAGCAGGCAACCGCACTGTT...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | GGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAATGAGTAACAGTTCAAAAACTGGAACAACCTaGATCTCCCCTTTCTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCPFYVCTVTSNTMSNSSKTGTT*ISPFSS Trigger: AGACGAGAAAGGGGAGATGCAGGTTGTTCCAGTTTT...TGAACTGTTACTCATTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTATGGCAGACAGGAGATaGACCAAAACTGGAACAACC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSHLYIFIERRYVQMCMADRR*TKTGTT Trigger: GGTTGTTCCAGTTTTGGTGCATCTCCTGTCTGCCAT...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAAGTCCTTGATCTTGGATaGCCATATCATCGATCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQVLDLG*PYHRSD Trigger: ATCCGATCGATGATATGGGCATCCAAGATCAAGGAC...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | GGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAATGAGTAACAGTTCATCCAATGGCTTTTGCTaGTTGACACATCTGTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCPFYVCTVTSNTMSNSSSNGFC*LTHLSK Trigger: CTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGA...TGAACTGTTACTCATTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAACTGCTTTCCAATAGTTaGGCTCATCTTCTCGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQLLSNS*AHLLVY Trigger: GTAGACGAGAAGATGAGCCCAACTATTGGAAAGCAG...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | GACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGACTTACTTTTCTACGACCCCTaGAATTGCTCTATAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DAMYKCVCYMPSQNDVDLLFYDP*NCSIML Trigger: CAGCATTATAGAGCAATTCCAGGGGTCGTAGAAAAG...TAAGTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR TCA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTGGAAAGCATCAAGAATaGATGGGTATTCCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTLSHLYIFIERRYVQMCGKHQE*MGIPLL Trigger: CAGCAAAGGAATACCCATTCATTCTTGATGCTTTCC...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | GGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAATGAGTAACAGTTCACCGCAGCACTTGCATTaGAGTGTTAAAATTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCPFYVCTVTSNTMSNSSPQHLH*SVKIIF Trigger: GAAGATAATTTTAACACTGCAATGCAAGTGCTGCGG...TGAACTGTTACTCATTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGCATCTGAAGAGCATATaGTTCACAGTCCTTCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLCMYPISSRTHILTKHLKSI*FTVLLT Trigger: AGTAAGAAGGACTGTGAAGCATATGCTCTTCAGATG...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTAGGTCGAAGGTCTTTTaGAATATAGAGCCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLSHLYIFIERRYVQMCRSKVF*NIEPDS Trigger: ACTGTCAGGCTCTATATTCCAAAAGACCTTCGACCT...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGAAGATGATCACAGGCTaGAAATTTCTCTCCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LSRLCMYPISSRTHILTKKMITG*KFLSII Trigger: GATTATGGAGAGAAATTTCCAGCCTGTGATCATCTT...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTATTTGAACTTCCTGTATaGATTTTAAGACACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVTKTLSHLYIFIERRYVFELPV*ILRHSV Trigger: GACAGAGTGTCTTAAAATCCATACAGGAAGTTCAAA...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR GCA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTCATAACGAGACAAGATaGTGTGGGATTAATAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSHLYIFIERRYVQMCHNETR*CGINSN Trigger: GTTACTATTAATCCCACAGCATCTTGTCTCGTTATG...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CCA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTAAACTGTCGAGCATTTaGAATAGTAGCCGAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTLSHLYIFIERRYVQMCKLSSI*NSSRKK Trigger: TTTCTTTCGGCTACTATTCCAAATGCTCGACAGTTT...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| 3UTR CAA 72 bp | CTGTCACTAAAACACTGTCCCACCTGTACATTTTTATaGAAAGACGCTATGTACAAATGTGTATGTTACATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLKHCPTCTFL*KDAMYKCVCYM Trigger: CATGTAACATACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | CTCCCCTTTCTCGTCTGGCTTCGCTGGCTTTGCTGCCTCGGTGGCTaGGTTCTTCAGGCTTTCCTTGCTACAGCGCAGGAGGACTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPFLVWLRWLCCLGG*VLQAFLATAQEDFH Trigger: GTGGAAGTCCTCCTGCGCTGTAGCAAGGAAAGCCTGAAGAACTCAGCCACCGAGGCAGCAAAGCCAGCGAAGCCAGACGAGAAAGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 90 bp | GCATCTCCCCTTTCTCGTCTGGCTTCGCTGGCTTTGCTGCCTCGGTaGCTGAGTTCTTCAGGCTTTCCTTGCTACAGCGCAGGAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ASPLSRLASLALLPR*LSSSGFPCYSAGGL Trigger: AAGTCCTCCTGCGCTGTAGCAAGGAAAGCCTGAAGAACTCAGCCACCGAGGCAGCAAAGCCAGCGAAGCCAGACGAGAAAGGGGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | CGTCCGCACTGCTTATTTCACAAGCCACCCGTCCTTTCATCTCTATaGCATCCGACGATGTCGCAAAGCCCAGCCGTCTCAGCACGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RPHCLFHKPPVLSSL*HPTMSQSPAVSARA Trigger: AGCGCGTGCTGAGACGGCTGGGCTTTGCGACATCGTCGGATGTCATAGAGATGAAAGGACGGGTGGCTTGTGAAATAAGCAGTGCGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | TCGCTGGCTTTGCTGCCTCGGTGGCTGAGTTCTTCAGGCTTTCCTTaGTACAGCGCAGGAGGACTTCCACCACATACAAGGGATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLALLPRWLSSSGFP*YSAGGLPPHTRDPV Trigger: AACTGGATCCCTTGTATGTGGTGGAAGTCCTCCTGCGCTGTAGCAAGGAAAGCCTGAAGAACTCAGCCACCGAGGCAGCAAAGCCAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | ACAGTGCTGATGGCAGACAGGAGATGCACCAAAACTGGAACAACCTaGATCTCCCCTTTCTCGTCTGGCTTCGCTGGCTTTGCTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TVLMADRRCTKTGTT*ISPFSSGFAGFAAS Trigger: CGAGGCAGCAAAGCCAGCGAAGCCAGACGAGAAAGGGGAGATGCAGGTTGTTCCAGTTTTGGTGCATCTCCTGTCTGCCATCAGCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | ACGATGTCGCAAAGCCCAGCCGTCTCAGCACGCGCTTGCGGCATTTaGGCTCGTCCATTTGCAGAACAGTTCTTGCCTTCTTCAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TMSQSPAVSARACGI*ARPFAEQFLPSSVL Trigger: GAGAACTGAAGAAGGCAAGAACTGTTCTGCAAATGGACGAGCTCAAATGCCGCAAGCGCGTGCTGAGACGGCTGGGCTTTGCGACATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGTTCTCTTTGTCTTTCTaGGCTCCTGCTGCAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERKEEDPHTTLHETASSRFSLSF*APAAEV Trigger: GACCTCTGCAGCAGGAGCCAAGAAAGACAAAGAGAA...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | TACCATAAGAATCACAATCCCTCTGTCGTCCATGCCTCTCCTTCCTaGGCGACCAGACATCTGGATGTACTCGCCAGAGGAAATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: YHKNHNPSVVHASPS*ATRHLDVLARGNPS Trigger: AGATGGATTTCCTCTGGCGAGTACATCCAGATGTCTGGTCGCGCAGGAAGGAGAGGCATGGACGACAGAGGGATTGTGATTCTTATGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCCCTTCTGGTCTCCTTaGGCCAAATCACCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TKRERKRIHTRLSMKPPVPFWSP*AKSPAS Trigger: GGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGGG...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | TGGCCCCAGTTGCCCAGGTATACACCACATCCATCAGGTGAGGCTTaGATGAGCTTAGGTAAGTTTCTTCATCAATCTCCAGCTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WPQLPRYTPHPSGEA*MSLGKFLHQSPALP Trigger: AGGCAAAGCTGGAGATTGATGAAGAAACTTACCTAAGCTCATTCAAGCCTCACCTGATGGATGTGGTGTATACCTGGGCAACTGGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | GAAGTCACCATTTTCATCAACCACCAGGTGAAGGCCATCTCCCCCTaGTGGAAATATGTAGTGTTGCAGTGGAGTGGGTCGATAATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EVTIFINHQVKAISP*WKYVVLQWSGSIIS Trigger: ACTGATTATCGACCCACTCCACTGCAACACTACATATTTCCAGCAGGGGGAGATGGCCTTCACCTGGTGGTTGATGAAAATGGTGACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 90 bp | TTGAACACATTTGATGGACCTTTTGTTCCTCCTTTCCGTCCCTTCTaGTCTCCTTTGGCCAAATCACCTGCATCCCGCAGCACTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LNTFDGPFVPPFRPF*SPLAKSPASRSTCI Trigger: AATGCAAGTGCTGCGGGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGGGACGGAAAGGAGGAACAAAAGGTCCATCAAATGTGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 90 bp | CTAACAGAGGAACGCCGTCGGGAAAGCGCCTTTGAACTTCCTGTATaGATTTTAAGACACTCTGTCTGTTGTCCACAGGTCGAAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTEERRRESAFELPV*ILRHSVCCPQVEGL Trigger: AAGACCTTCGACCTGTGGACAACAGACAGAGTGTCTTAAAATCCATACAGGAAGTTCAAAGGCGCTTTCCCGACGGCGTTCCTCTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCTCCACTGACTGTACCTaGACTCTGGGCATCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSYKERKEEDPHTTLHETSTDCT*TLGIRS Trigger: GGACCTGATGCCCAGAGTCAAGGTACAGTCAGTGGA...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | TGTTCCTCCTTTCCGTCCCTTCTGGTCTCCTTTGGCCAAATCACCTaGATCCCGCAGCACTTGCATTGCAGTGTTAAAATTATCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSFPSLLVSFGQIT*IPQHLHCSVKIIFS Trigger: AGAGAAGATAATTTTAACACTGCAATGCAAGTGCTGCGGGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGGGACGGAAAGGAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | GACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGACTTAAGTCGTTTCCCGGCCTaGTCTGCAGACCCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DAMYKCVCYMPSQNDVDLSRFPA*SADPGG Trigger: GCCACCAGGGTCTGCAGACAAGGCCGGGAAACGACT...TAAGTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | CGATGCTCAAAGGCCTCTACTTTCTGGATGACTTTCTTCAGTCCTTaGTCTTGGATGCCCATATCATCGATCGGATCTAACAGAGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: RCSKASTFWMTFFSP*SWMPISSIGSNRGT Trigger: CGTTCCTCTGTTAGATCCGATCGATGATATGGGCATCCAAGATCAAGGACTGAAGAAAGTCATCCAGAAAGTAGAGGCCTTTGAGCATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | GCAAATTTGTTCTCCAGCTCTGTGTTTCCAATGGCTTTTGCTGCTTaGCACATCTGTCGAAGCAGTTCTTCCAGACGCCTCATACAACGA | + |
|
Preference number: 5 (lower is better) Translates to: ANLFSSSVFPMAFAA*HICRSSSSRRLIQR Trigger: TCGTTGTATGAGGCGTCTGGAAGAACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACACAGAGCTGGAGAACAAATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | AGCTTTGCCTCTGCTGAAACTTTTGCAATCCTTTTAGCACATTCCTaGATTTGTCGGAGTGGTCCAGCTAACTGCTCTGTTAGTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFASAETFAILLAHS*ICRSGPANCSVSLG Trigger: GCCCAAACTAACAGAGCAGTTAGCTGGACCACTCCGACAAATGCAGGAATGTGCTAAAAGGATTGCAAAAGTTTCAGCAGAGGCAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | TCCTTCAGCAAATTTGTTCTCCAGCTCTGTGTTTCCAATGGCTTTTaGTGCTTGACACATCTGTCGAAGCAGTTCTTCCAGACGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSKFVLQLCVSNGF*CLTHLSKQFFQTPH Trigger: ATGAGGCGTCTGGAAGAACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACACAGAGCTGGAGAACAAATTTGCTGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGAAAACATCTGTCATTTaGCAGATATGGGCAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERKEEDPHTTLHETASSRKTSVI*QIWANV Trigger: CACATTTGCCCATATCTGCAAAATGACAGATGTTTT...CCGTGAACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | CCCTTCTGGTCTCCTTTGGCCAAATCACCTGCATCCCGCAGCACTTaGATTGCAGTGTTAAAATTATCTTCTCTGAAGTCACCATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PFWSPLAKSPASRST*IAVLKLSSLKSPFS Trigger: TGAAAATGGTGACTTCAGAGAAGATAATTTTAACACTGCAATGCAAGTGCTGCGGGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | TTCAGCAAATTTGTTCTCCAGCTCTGTGTTTCCAATGGCTTTTGCTaGTTGACACATCTGTCGAAGCAGTTCTTCCAGACGCCTCATACA | + |
|
Preference number: 5 (lower is better) Translates to: FSKFVLQLCVSNGFC*LTHLSKQFFQTPHT Trigger: TGTATGAGGCGTCTGGAAGAACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACACAGAGCTGGAGAACAAATTTGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 90 bp | AATGAATGGGTATTCCTTTGCTGCCTTCCCAACTCGAGGTTTAAGTaGTATATAATCCTCATCTGCAGGAAGAGCGACCTCATGTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NEWVFLCCLPNSRFK*YIILICRKSDLMCA Trigger: TGCACACATGAGGTCGCTCTTCCTGCAGATGAGGATTATATACCACTTAAACCTCGAGTTGGGAAGGCAGCAAAGGAATACCCATTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | CCAGCTAACTGCTCTGTTAGTTTGGGCATCTCACTAGAATTCTCTTaGAACACAAAACAGCTTAACAGTGCGGTTGCCTGCTCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PANCSVSLGISLEFS*NTKQLNSAVACSEE Trigger: TTCTTCAGAGCAGGCAACCGCACTGTTAAGCTGTTTTGTGTTTCAAGAGAATTCTAGTGAGATGCCCAAACTAACAGAGCAGTTAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | ACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCATCAGCCCCACATCTaGAAATTCTTCATACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TKRERKRIHTRLSMKPPVHQPHI*KFFIHF Trigger: GAAATGTATGAAGAATTTCAAGATGTGGGGCTGATG...AACTGGCGGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | ACACACATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGTGCATCCCGCAGCACTaGCATTGCAGTGTTAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: THILTKRERKRIHTRLSMCIPQH*HCSVKI Trigger: AATTTTAACACTGCAATGCAAGTGCTGCGGGATGCA...CATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCCTACGACCCCTGGAATaGCTCTATAATGCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: HSYKERKEEDPHTTLHETLRPLE*LYNAET Trigger: AGTTTCAGCATTATAGAGCAATTCCAGGGGTCGTAG...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CATTCTTACAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCTCCAGTTCGCCAGAATaGGGCTTGACATTTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSYKERKEEDPHTTLHETSSSPE*GLTFDF Trigger: AAAGTCAAATGTCAAGCCCAATTCTGGCGAACTGGA...GGTTTCATGGAGAGTCGTGTGTGGATCCTCTTCCTTTCTCTCTTTGTAAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTATTCTTCAGGCTTTCCTaGCTACAGCGCAGGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PVTKTLSHLYIFIERRYVFFRLS*LQRRRT Trigger: AGTCCTCCTGCGCTGTAGCAAGGAAAGCCTGAAGAA...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAACAAATGTGGCCCCAGTaGCCCAGGTATACACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQQMWPQ*PRYTPH Trigger: ATGTGGTGTATACCTGGGCAACTGGGGCCACATTTG...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 90 bp | ATACAGCATACTTCTCAAAATCTCTGTAGTCATAACGAGACAAGATaGTGTGGGATTAATAGTAACATCTCCCGTCATCAGCCCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: IQHTSQNLCSHNETR*CGINSNISRHQPHI Trigger: GATGTGGGGCTGATGACGGGAGATGTTACTATTAATCCCACAGCATCTTGTCTCGTTATGACTACAGAGATTTTGAGAAGTATGCTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTAGTCGGGAAAGCGCCTTaGAACTTCCTGTATGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: PVTKTLSHLYIFIERRYVVGKAP*NFLYGF Trigger: AAATCCATACAGGAAGTTCAAAGGCGCTTTCCCGAC...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTAAATGGCTTTTGCTGCTaGACACATCTGTCGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVTKTLSHLYIFIERRYVNGFCC*THLSKQ Trigger: CTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATT...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGCATTTGATGGACCTTTaGTTCCTCCTTTCCGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSRLCMYPISSRTHILTKHLMDL*FLLSVP Trigger: AGGGACGGAAAGGAGGAACAAAAGGTCCATCAAATG...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTAAGACACTCTGTCTGTaGTCCACAGGTCGAAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTLSHLYIFIERRYVQMCKTLCL*STGRRS Trigger: AGACCTTCGACCTGTGGACAACAGACAGAGTGTCTT...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | GGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAATGAGTAACAGTTCATCCAAGTTAGGATCATaGTGGAGTGGGTGTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GCPFYVCTVTSNTMSNSSSKLGS*WSGCEY Trigger: GTACTCACACCCACTCCACAATGATCCTAACTTGGA...TGAACTGTTACTCATTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | ACCATCTTCTTTTCTTCATCTGTGTTGAAGTCTAGCTTCGTCATCTaGAGAGCATATGCTTCACAGTCCTTCTTACTGAAACTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TIFFSSSVLKSSFVI*RAYASQSFLLKLKM Trigger: CATCTTCAGTTTCAGTAAGAAGGACTGTGAAGCATATGCTCTTCAGATGACGAAGCTAGACTTCAACACAGATGAAGAAAAGAAGATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 90 bp | TTTGCAGAACAGTTCTTGCCTTCTTCAGTTCTCTCTTTGCAGACTTaGTATCTAGTGCAATCTGGGCCTTTCTTTCACACAGTGTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: FAEQFLPSSVLSLQT*YLVQSGPFFHTVYK Trigger: TTTATACACTGTGTGAAAGAAAGGCCCAGATTGCACTAGATATCAAGTCTGCAAAGAGAGAACTGAAGAAGGCAAGAACTGTTCTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTATCCCAGCTTGGCAAGTaGCTGTCTAATCTTGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: PVTKTLSHLYIFIERRYVSQLGK*LSNLVI Trigger: TATTACAAGATTAGACAGCAACTTGCCAAGCTGGGA...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | GGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAATGAGTAACAGTTCACTTCAGTCCTTGATCTaGGATGCCCATATCATCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GCPFYVCTVTSNTMSNSSLQSLI*DAHIID Trigger: ATCGATGATATGGGCATCCAAGATCAAGGACTGAAG...TGAACTGTTACTCATTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGTTTGAGCTCGTCCATTaGCAGAACAGTTCTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSRLCMYPISSRTHILTKFELVH*QNSSCL Trigger: AAGGCAAGAACTGTTCTGCAAATGGACGAGCTCAAA...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | TTGTCTAGGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTACAAAGTGTTTCCAATGGCTTTaGCTGCTTGACACATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRLCMYPISSRTHILTKCFQWL*LLDTSV Trigger: GACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACA...CTTTGTAAGAATGTGTGTCCTTGAAGAAATCGGATACATACAAAGCCTAGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTATCTCTTTTCCCAGCTaGGCAAGTTGCTGTCTAATC | + |
|
Preference number: 5 (lower is better) Translates to: KTLSHLYIFIERRYVQMCISFPS*ASCCLI Trigger: GATTAGACAGCAACTTGCCAAGCTGGGAAAAGAGAT...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTGACTTTCTTCAGTCCTaGATCTTGGATGCCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: KTLSHLYIFIERRYVQMCDFLQS*ILDAHI Trigger: GATATGGGCATCCAAGATCAAGGACTGAAGAAAGTC...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | GACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGACTTAAACTGCTCTGTTAGTTaGGGCATCTCACTAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: DAMYKCVCYMPSQNDVDLNCSVS*GISLEF Trigger: GAATTCTAGTGAGATGCCCAAACTAACAGAGCAGTT...TAAGTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTAATTCCTTCAGCAAATTaGTTCTCCAGCTCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVTKTLSHLYIFIERRYVIPSAN*FSSSVF Trigger: AAACACAGAGCTGGAGAACAAATTTGCTGAAGGAAT...TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | AAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTACAAATGTGTTTTGCAGAACAGTTCTaGCCTTCTTCAGTTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTLSHLYIFIERRYVQMCFAEQF*PSSVLS Trigger: AGAGAGAACTGAAGAAGGCAAGAACTGTTCTGCAAA...ACACATTTGTACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | TATCTATACCTCCTGGATGCCCATTTTATGTGTGTACAGTTACTTCTAACACAATCATTGAAAAGCCCATaGAACATCATCTCCGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: YLYLLDAHFMCVQLLLTQSLKSP*NIISVR Trigger: TCTAACGGAGATGATGTTCAATGGGCTTTTCAATGA...TTGTGTTAGAAGTAACTGTACACACATAAAATGGGCATCCAGGAGGTATAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 90 bp | TATGCTTCACAGTCCTTCTTACTGAAACTGAAGATGATCACAGGCTaGAAATTTCTCTCCATAATCATCTTCACAATCTTGAACACATTT | + |
|
Preference number: 5 (lower is better) Translates to: YASQSFLLKLKMITG*KFLSIIIFTILNTF Trigger: AAATGTGTTCAAGATTGTGAAGATGATTATGGAGAGAAATTTCCAGCCTGTGATCATCTTCAGTTTCAGTAAGAAGGACTGTGAAGCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS-3UTR CAA 90 bp | GACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGACTTAATCATCTTCACAATCTaGAACACATTTGATGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: DAMYKCVCYMPSQNDVDLIIFTI*NTFDGP Trigger: AGGTCCATCAAATGTGTTCAAGATTGTGAAGATGAT...TAAGTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 72 bp | CTTTCTCGTCTGGCTTCGCTGGCTTTGCTGCCTCGGTaGCTGAGTTCTTCAGGCTTTCCTTGCTACAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSRLASLALLPR*LSSSGFPCYSA Trigger: TGCGCTGTAGCAAGGAAAGCCTGAAGAACTCAGCCACCGAGGCAGCAAAGCCAGCGAAGCCAGACGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | CAAAGCCCAGCCGTCTCAGCACGCGCTTGCGGCATTTaGGCTCGTCCATTTGCAGAACAGTTCTTGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSPAVSARACGI*ARPFAEQFLPS Trigger: AGAAGGCAAGAACTGTTCTGCAAATGGACGAGCTCAAATGCCGCAAGCGCGTGCTGAGACGGCTGGGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | AATCACAATCCCTCTGTCGTCCATGCCTCTCCTTCCTaGGCGACCAGACATCTGGATGTACTCGCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NHNPSVVHASPS*ATRHLDVLARG Trigger: TCCTCTGGCGAGTACATCCAGATGTCTGGTCGCGCAGGAAGGAGAGGCATGGACGACAGAGGGATTGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 90 bp | GACGATGTCGCAAAGCCCAGCCGTCTCAGCACGCGCTTGCGGCATTaGAGCTCGTCCATTTGCAGAACAGTTCTTGCCTTCTTCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DDVAKPSRLSTRLRH*SSSICRTVLAFFSS Trigger: AGAACTGAAGAAGGCAAGAACTGTTCTGCAAATGGACGAGCTCAAATGCCGCAAGCGCGTGCTGAGACGGCTGGGCTTTGCGACATCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | TTTGCTGCCTCGGTGGCTGAGTTCTTCAGGCTTTCCTaGCTACAGCGCAGGAGGACTTCCACCACATACAAG | + |
|
Preference number: 6 (lower is better) Translates to: FAASVAEFFRLS*LQRRRTSTTYK Trigger: CTTGTATGTGGTGGAAGTCCTCCTGCGCTGTAGCAAGGAAAGCCTGAAGAACTCAGCCACCGAGGCAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 90 bp | GCCCAGCCGTCTCAGCACGCGCTTGCGGCATTTGAGCTCGTCCATTaGCAGAACAGTTCTTGCCTTCTTCAGTTCTCTCTTTGCAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: AQPSQHALAAFELVH*QNSSCLLQFSLCRL Trigger: AAGTCTGCAAAGAGAGAACTGAAGAAGGCAAGAACTGTTCTGCAAATGGACGAGCTCAAATGCCGCAAGCGCGTGCTGAGACGGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 72 bp | TTTGATGGACCTTTTGTTCCTCCTTTCCGTCCCTTCTaGTCTCCTTTGGCCAAATCACCTGCATCCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FDGPFVPPFRPF*SPLAKSPASRS Trigger: GCTGCGGGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGGGACGGAAAGGAGGAACAAAAGGTCCATCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | GTGTGCAGCCTTCAACTGTTTCCACTGACTGTACCTTaGCTCTGGGCATCAGGTCCGCCAGGCTTAAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VCSLQLFPLTVP*LWASGPPGLNL Trigger: AAGATTTAAGCCTGGCGGACCTGATGCCCAGAGTCAAGGTACAGTCAGTGGAAACAGTTGAAGGCTGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | TGCTTATTTCACAAGCCACCCGTCCTTTCATCTCTATaGCATCCGACGATGTCGCAAAGCCCAGCCGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLFHKPPVLSSL*HPTMSQSPAVS Trigger: TGAGACGGCTGGGCTTTGCGACATCGTCGGATGTCATAGAGATGAAAGGACGGGTGGCTTGTGAAATAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | ATTTTCATCAACCACCAGGTGAAGGCCATCTCCCCCTaGTGGAAATATGTAGTGTTGCAGTGGAGTGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: IFINHQVKAISP*WKYVVLQWSGS Trigger: CGACCCACTCCACTGCAACACTACATATTTCCAGCAGGGGGAGATGGCCTTCACCTGGTGGTTGATGAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | GCACTGTTCAGAGGATCAGCTGACCCCTTAAGCAGCTaGTTTCCAATAGTTGGGCTCATCTTCTCGTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: ALFRGSADPLSS*FPIVGLIFSST Trigger: GGTAGACGAGAAGATGAGCCCAACTATTGGAAAGCAGCTGCTTAAGGGGTCAGCTGATCCTCTGAACAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 72 bp | TTCATCAACCACCAGGTGAAGGCCATCTCCCCCTGCTaGAAATATGTAGTGTTGCAGTGGAGTGGGTCGATA | + |
|
Preference number: 6 (lower is better) Translates to: FINHQVKAISPC*KYVVLQWSGSI Trigger: TATCGACCCACTCCACTGCAACACTACATATTTCCAGCAGGGGGAGATGGCCTTCACCTGGTGGTTGATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | TCTGATTGTAATTTGGTATCCAGTCGTTTCCCGGCCTaGTCTGCAGACCCTGGTGGCCCCTTCCATTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SDCNLVSSRFPA*SADPGGPFHFS Trigger: AGAGAAATGGAAGGGGCCACCAGGGTCTGCAGACAAGGCCGGGAAACGACTGGATACCAAATTACAATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | TGTGTGCAGCCTTCAACTGTTTCCACTGACTGTACCTaGACTCTGGGCATCAGGTCCGCCAGGCTTAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: CVQPSTVSTDCT*TLGIRSARLKS Trigger: AGATTTAAGCCTGGCGGACCTGATGCCCAGAGTCAAGGTACAGTCAGTGGAAACAGTTGAAGGCTGCACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | TTCTCCAGCTCTGTGTTTCCAATGGCTTTTGCTGCTTaGCACATCTGTCGAAGCAGTTCTTCCAGACGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSVFPMAFAA*HICRSSSSRRL Trigger: GAGGCGTCTGGAAGAACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACACAGAGCTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 72 bp | GACACTCTGTCTGTTGTCCACAGGTCGAAGGTCTTTTaGAATATAGAGCCTGACAGTGCTGATGGCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: DTLSVVHRSKVF*NIEPDSADGRQ Trigger: CTGTCTGCCATCAGCACTGTCAGGCTCTATATTCCAAAAGACCTTCGACCTGTGGACAACAGACAGAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | TCTCAGCACGCGCTTGCGGCATTTGAGCTCGTCCATTaGCAGAACAGTTCTTGCCTTCTTCAGTTCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SQHALAAFELVH*QNSSCLLQFSL Trigger: AAGAGAGAACTGAAGAAGGCAAGAACTGTTCTGCAAATGGACGAGCTCAAATGCCGCAAGCGCGTGCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 90 bp | GCGACCTCATGTGTGCAGCCTTCAACTGTTTCCACTGACTGTACCTaGACTCTGGGCATCAGGTCCGCCAGGCTTAAATCTTCATTAATT | + |
|
Preference number: 6 (lower is better) Translates to: ATSCVQPSTVSTDCT*TLGIRSARLKSSLI Trigger: AATTAATGAAGATTTAAGCCTGGCGGACCTGATGCCCAGAGTCAAGGTACAGTCAGTGGAAACAGTTGAAGGCTGCACACATGAGGTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | GCATACTCGGCACACACGGTCTTCCCTGCTGACGTATaGGCAGATACTAGCACAGACTGGTTATTATCAACA | + |
|
Preference number: 6 (lower is better) Translates to: AYSAHTVFPADV*ADTSTDWLLST Trigger: TGTTGATAATAACCAGTCTGTGCTAGTATCTGCTCATACGTCAGCAGGGAAGACCGTGTGTGCCGAGTATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | ATAGGTCAGATGGAAAGCACTGTTCAGAGGATCAGCTaGCCCCTTAAGCAGCTGCTTTCCAATAGTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IGQMESTVQRIS*PLKQLLSNSWA Trigger: AGCCCAACTATTGGAAAGCAGCTGCTTAAGGGGTCAGCTGATCCTCTGAACAGTGCTTTCCATCTGACCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | CCCAACTCGAGGTTTAAGTGGTATATAATCCTCATCTaGAGGAAGAGCGACCTCATGTGTGCAGCCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PNSRFKWYIILI*RKSDLMCAAFN Trigger: GTTGAAGGCTGCACACATGAGGTCGCTCTTCCTGCAGATGAGGATTATATACCACTTAAACCTCGAGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | TTTCCGTCCCTTCTGGTCTCCTTTGGCCAAATCACCTaGATCCCGCAGCACTTGCATTGCAGTGTTAAAATT | + |
|
Preference number: 6 (lower is better) Translates to: FPSLLVSFGQIT*IPQHLHCSVKI Trigger: AATTTTAACACTGCAATGCAAGTGCTGCGGGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGGGACGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | GTTGCCTGCTCTGAAGAAAGGTCATTGAAAAGCCCATaGAACATCATCTCCGTTAGAAGGAGCTCGTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: VACSEERSLKSP*NIISVRRSSSA Trigger: TGCGGACGAGCTCCTTCTAACGGAGATGATGTTCAATGGGCTTTTCAATGACCTTTCTTCAGAGCAGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 90 bp | AACAGTGCGGTTGCCTGCTCTGAAGAAAGGTCATTGAAAAGCCCATaGAACATCATCTCCGTTAGAAGGAGCTCGTCCGCACTGCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: NSAVACSEERSLKSP*NIISVRRSSSALLI Trigger: AATAAGCAGTGCGGACGAGCTCCTTCTAACGGAGATGATGTTCAATGGGCTTTTCAATGACCTTTCTTCAGAGCAGGCAACCGCACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 90 bp | ACAAAACAGCTTAACAGTGCGGTTGCCTGCTCTGAAGAAAGGTCATaGAAAAGCCCATTGAACATCATCTCCGTTAGAAGGAGCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TKQLNSAVACSEERS*KSPLNIISVRRSSS Trigger: GGACGAGCTCCTTCTAACGGAGATGATGTTCAATGGGCTTTTCAATGACCTTTCTTCAGAGCAGGCAACCGCACTGTTAAGCTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | GCACATTCCTGCATTTGTCGGAGTGGTCCAGCTAACTaGTCTGTTAGTTTGGGCATCTCACTAGAATTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AHSCICRSGPAN*SVSLGISLEFS Trigger: AGAGAATTCTAGTGAGATGCCCAAACTAACAGAGCAGTTAGCTGGACCACTCCGACAAATGCAGGAATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | TTTGTTCTCCAGCTCTGTGTTTCCAATGGCTTTTGCTaGTTGACACATCTGTCGAAGCAGTTCTTCCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: FVLQLCVSNGFC*LTHLSKQFFQT Trigger: CGTCTGGAAGAACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACACAGAGCTGGAGAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 72 bp | GTATTCCTTTGCTGCCTTCCCAACTCGAGGTTTAAGTaGTATATAATCCTCATCTGCAGGAAGAGCGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: VFLCCLPNSRFK*YIILICRKSDL Trigger: GAGGTCGCTCTTCCTGCAGATGAGGATTATATACCACTTAAACCTCGAGTTGGGAAGGCAGCAAAGGAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | GTGAAGGCCATCTCCCCCTGCTGGAAATATGTAGTGTaGCAGTGGAGTGGGTCGATAATCAGTGTAAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: VKAISPCWKYVV*QWSGSIISVNN Trigger: GTTATTTACACTGATTATCGACCCACTCCACTGCAACACTACATATTTCCAGCAGGGGGAGATGGCCTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 90 bp | TCCCTTCTGGTCTCCTTTGGCCAAATCACCTGCATCCCGCAGCACTaGCATTGCAGTGTTAAAATTATCTTCTCTGAAGTCACCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLVSFGQITCIPQH*HCSVKIIFSEVTIF Trigger: GAAAATGGTGACTTCAGAGAAGATAATTTTAACACTGCAATGCAAGTGCTGCGGGATGCAGGTGATTTGGCCAAAGGAGACCAGAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | TTAGGATCATTGTGGAGTGGGTGTGAGTACATGCGATaGTCAAAGGCCTCTACTTTCTGGATGACTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGSLWSGCEYMR*SKASTFWMTFF Trigger: GAAGAAAGTCATCCAGAAAGTAGAGGCCTTTGAGCATCGCATGTACTCACACCCACTCCACAATGATCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 72 bp | GCCATCTCCCCCTGCTGGAAATATGTAGTGTTGCAGTaGAGTGGGTCGATAATCAGTGTAAATAACATGACA | + |
|
Preference number: 6 (lower is better) Translates to: AISPCWKYVVLQ*SGSIISVNNMT Trigger: TGTCATGTTATTTACACTGATTATCGACCCACTCCACTGCAACACTACATATTTCCAGCAGGGGGAGATGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | CAACGAATTATACTGCCTTCGAAAACATCTGTCATTTaGCAGATATGGGCAAATGTGGCCCCAGTTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QRIILPSKTSVI*QIWANVAPVAQ Trigger: CTGGGCAACTGGGGCCACATTTGCCCATATCTGCAAAATGACAGATGTTTTCGAAGGCAGTATAATTCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | TGCTCTGTTAGTTTGGGCATCTCACTAGAATTCTCTTaGAACACAAAACAGCTTAACAGTGCGGTTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSVSLGISLEFS*NTKQLNSAVAC Trigger: GCAGGCAACCGCACTGTTAAGCTGTTTTGTGTTTCAAGAGAATTCTAGTGAGATGCCCAAACTAACAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | TTGCCCAGGTATACACCACATCCATCAGGTGAGGCTTaGATGAGCTTAGGTAAGTTTCTTCATCAATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPRYTPHPSGEA*MSLGKFLHQSP Trigger: TGGAGATTGATGAAGAAACTTACCTAAGCTCATTCAAGCCTCACCTGATGGATGTGGTGTATACCTGGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | TCTCCTTTGGCCAAATCACCTGCATCCCGCAGCACTTaGATTGCAGTGTTAAAATTATCTTCTCTGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLAKSPASRST*IAVLKLSSLKS Trigger: TGACTTCAGAGAAGATAATTTTAACACTGCAATGCAAGTGCTGCGGGATGCAGGTGATTTGGCCAAAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | TCTGCTGAAACTTTTGCAATCCTTTTAGCACATTCCTaGATTTGTCGGAGTGGTCCAGCTAACTGCTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SAETFAILLAHS*ICRSGPANCSV Trigger: AACAGAGCAGTTAGCTGGACCACTCCGACAAATGCAGGAATGTGCTAAAAGGATTGCAAAAGTTTCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | AAATTTGTTCTCCAGCTCTGTGTTTCCAATGGCTTTTaGTGCTTGACACATCTGTCGAAGCAGTTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KFVLQLCVSNGF*CLTHLSKQFFQ Trigger: CTGGAAGAACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACACAGAGCTGGAGAACAAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | CAAATTTGTTCTCCAGCTCTGTGTTTCCAATGGCTTTaGCTGCTTGACACATCTGTCGAAGCAGTTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QICSPALCFQWL*LLDTSVEAVLP Trigger: TGGAAGAACTGCTTCGACAGATGTGTCAAGCAGCAAAAGCCATTGGAAACACAGAGCTGGAGAACAAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS TCA 72 bp | CAGTTCTTGCCTTCTTCAGTTCTCTCTTTGCAGACTTaGTATCTAGTGCAATCTGGGCCTTTCTTTCACACA | + |
|
Preference number: 6 (lower is better) Translates to: QFLPSSVLSLQT*YLVQSGPFFHT Trigger: TGTGTGAAAGAAAGGCCCAGATTGCACTAGATATCAAGTCTGCAAAGAGAGAACTGAAGAAGGCAAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CAA 72 bp | ACAGTTCTTGCCTTCTTCAGTTCTCTCTTTGCAGACTaGATATCTAGTGCAATCTGGGCCTTTCTTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: TVLAFFSSLFAD*ISSAIWAFLSH Trigger: GTGTGAAAGAAAGGCCCAGATTGCACTAGATATCAAGTCTGCAAAGAGAGAACTGAAGAAGGCAAGAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS GCA 72 bp | ACTTCTCAAAATCTCTGTAGTCATAACGAGACAAGATaGTGTGGGATTAATAGTAACATCTCCCGTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSQNLCSHNETR*CGINSNISRHQ Trigger: CTGATGACGGGAGATGTTACTATTAATCCCACAGCATCTTGTCTCGTTATGACTACAGAGATTTTGAGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||
| CDS CCA 72 bp | CAGTCCTTCTTACTGAAACTGAAGATGATCACAGGCTaGAAATTTCTCTCCATAATCATCTTCACAATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QSFLLKLKMITG*KFLSIIIFTIL Trigger: CAAGATTGTGAAGATGATTATGGAGAGAAATTTCCAGCCTGTGATCATCTTCAGTTTCAGTAAGAAGGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022281.5 |
||