Pregenerated sensors for MTR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021311Ensembl transcript IDs: ENSMUST00000099856.6, ENSMUST00000221290.2
Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTCCCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTaGATCGCAGTCAACCAGCCTCTCCCAGCAGGGCAGAGGGCAGGG | + |
Preference number: 1 (lower is better) Translates to: VPGKVLLFQNPRGLL*IAVNQPLPAGQRAG Trigger: CCCTGCCCTCTGCCCTGCTGGGAGAGGCTGGTTGACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 90 bp | CTGGGACCATCCAGCATGCCGTCGTCCATGTTGATATCGAGCACCTaGGCTCCCATTTCCACCTGTGCTTTGGCAATGCTCAGGGCTTCT | + |
Preference number: 1 (lower is better) Translates to: LGPSSMPSSMLISST*APISTCALAMLRAS Trigger: AGAAGCCCTGAGCATTGCCAAAGCACAGGTGGAAATGGGAGCTCAGGTGCTCGATATCAACATGGACGACGGCATGCTGGATGGTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR GCA 90 bp | TGCACAGGGGCACCTTGGCAATGTCAGGCTCAGAAGCAATGGAGTTaGAAAATCTGGTCATTGCACTGGGACCATCCAGCATGCCGTCGT | + |
Preference number: 1 (lower is better) Translates to: CTGAPWQCQAQKQWS*KIWSLHWDHPACRR Trigger: ACGACGGCATGCTGGATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTGACATTGCCAAGGTGCCCCTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR TCA 90 bp | ATCTGGTCATTGCACTGGGACCATCCAGCATGCCGTCGTCCATGTTaGTATCGAGCACCTGAGCTCCCATTTCCACCTGTGCTTTGGCAA | + |
Preference number: 1 (lower is better) Translates to: IWSLHWDHPACRRPC*YRAPELPFPPVLWQ Trigger: TTGCCAAAGCACAGGTGGAAATGGGAGCTCAGGTGCTCGATATCAACATGGACGACGGCATGCTGGATGGTCCCAGTGCAATGACCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 90 bp | CCCTCCCCCTCCTTGAGGCTGATGCTGTTGACTATGCACTTCCCTTaGCAGCACTTCAACCCAGCTTCAATCACGGCAAAGTTAGAAGAG | + |
Preference number: 1 (lower is better) Translates to: PSPSLRLMLLTMHFP*QHFNPASITAKLEE Trigger: CTCTTCTAACTTTGCCGTGATTGAAGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAAGGAGGGGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR TCA 90 bp | GGCGGGGAATGCAGCCCTAATGAATATGCAAGCCTCAAGTGTGAATaGGTTCCTGTCAGGATCTCAGAGGCCAACTGTGAGGGAACATGC | + |
Preference number: 1 (lower is better) Translates to: GGECSPNEYASLKCE*VPVRISEANCEGTC Trigger: GCATGTTCCCTCACAGTTGGCCTCTGAGATCCTGACAGGAACTCATTCACACTTGAGGCTTGCATATTCATTAGGGCTGCATTCCCCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CCA 90 bp | TCACCAAGCCATCCACAGCAAAGTCCTTCAGGTGCGTGGCCATCGTaGATGGTGTTTCATCATAGTCGCCAAAAGTGTTGGGAAGACCTG | + |
Preference number: 1 (lower is better) Translates to: SPSHPQQSPSGAWPS*MVFHHSRQKCWEDL Trigger: CAGGTCTTCCCAACACTTTTGGCGACTATGATGAAACACCATCCACGATGGCCACGCACCTGAAGGACTTTGCTGTGGATGGCTTGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 90 bp | AGTCAATGCACAGGGGCACCTTGGCAATGTCAGGCTCAGAAGCAATaGAGTTGCAAAATCTGGTCATTGCACTGGGACCATCCAGCATGC | + |
Preference number: 1 (lower is better) Translates to: SQCTGAPWQCQAQKQ*SCKIWSLHWDHPAC Trigger: GCATGCTGGATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTGACATTGCCAAGGTGCCCCTGTGCATTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR GCA 90 bp | GGCAATGTCAGGCTCAGAAGCAATGGAGTTGCAAAATCTGGTCATTaGACTGGGACCATCCAGCATGCCGTCGTCCATGTTGATATCGAG | + |
Preference number: 1 (lower is better) Translates to: GNVRLRSNGVAKSGH*TGTIQHAVVHVDIE Trigger: CTCGATATCAACATGGACGACGGCATGCTGGATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTGACATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 90 bp | TTTTCTTCTACCATGTGGGTCCCAGAGCACAAACCAGGTGAGGTTTaGCAGCCTGTGCATTTACTCACTAAGCCTTCCTGCTGGTCCTGT | + |
Preference number: 1 (lower is better) Translates to: FSSTMWVPEHKPGEV*QPVHLLTKPSCWSC Trigger: ACAGGACCAGCAGGAAGGCTTAGTGAGTAAATGCACAGGCTGCCAAACCTCACCTGGTTTGTGCTCTGGGACCCACATGGTAGAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CCA 90 bp | CAAGCCATCCACAGCAAAGTCCTTCAGGTGCGTGGCCATCGTGGATaGTGTTTCATCATAGTCGCCAAAAGTGTTGGGAAGACCTGCATT | + |
Preference number: 1 (lower is better) Translates to: QAIHSKVLQVRGHRG*CFIIVAKSVGKTCI Trigger: AATGCAGGTCTTCCCAACACTTTTGGCGACTATGATGAAACACCATCCACGATGGCCACGCACCTGAAGGACTTTGCTGTGGATGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR TCA 90 bp | AAGATGTCTTCCGCTTGCCCCAATCATGAGGGCCCAGGAACACCATaGGCCTTGGCACTTTGTTGCTTCTCATTTAAGGTCCCTGGAAAA | + |
Preference number: 1 (lower is better) Translates to: KMSSACPNHEGPGTP*ALALCCFSFKVPGK Trigger: TTTTCCAGGGACCTTAAATGAGAAGCAACAAAGTGCCAAGGCTCATGGTGTTCCTGGGCCCTCATGATTGGGGCAAGCGGAAGACATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 90 bp | CCATGTGGGTCCCAGAGCACAAACCAGGTGAGGTTTGGCAGCCTGTaGATTTACTCACTAAGCCTTCCTGCTGGTCCTGTTTTTGTTTTT | + |
Preference number: 1 (lower is better) Translates to: PCGSQSTNQVRFGSL*IYSLSLPAGPVFVF Trigger: AAAAACAAAAACAGGACCAGCAGGAAGGCTTAGTGAGTAAATGCACAGGCTGCCAAACCTCACCTGGTTTGTGCTCTGGGACCCACATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CCA 90 bp | GGTGAGGTTTGGCAGCCTGTGCATTTACTCACTAAGCCTTCCTGCTaGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGC | + |
Preference number: 1 (lower is better) Translates to: GEVWQPVHLLTKPSC*SCFCFWRGYGTQDG Trigger: GCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGAAGGCTTAGTGAGTAAATGCACAGGCTGCCAAACCTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 90 bp | GAGGCTATGGAACTCAGGATGGCCTGTTACTCAAGCAAATCTTCCTaGCTCAACTTCCCAAATCCTGTGATTACAGACAAGGGTAGCACT | + |
Preference number: 1 (lower is better) Translates to: EAMELRMACYSSKSS*LNFPNPVITDKGST Trigger: AGTGCTACCCTTGTCTGTAATCACAGGATTTGGGAAGTTGAGGCAGGAAGATTTGCTTGAGTAACAGGCCATCCTGAGTTCCATAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 90 bp | CCTTTAATGCTTCTATTTACTGTCCCTCATCTGTTCCTTTCCTGCTaGTCCATCTCTGTTCTTCAGGTCCTAAACCGAGGCAACCAGGAC | + |
Preference number: 1 (lower is better) Translates to: PLMLLFTVPHLFLSC*SISVLQVLNRGNQD Trigger: GTCCTGGTTGCCTCGGTTTAGGACCTGAAGAACAGAGATGGAGCAGCAGGAAAGGAACAGATGAGGGACAGTAAATAGAAGCATTAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 90 bp | GCCTCTGCCACAGAGTTCTACATCCGCTTAGTTACACCTCAGAAGTaGGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCC | + |
Preference number: 1 (lower is better) Translates to: ASATEFYIRLVTPQK*DVTGEKKGILFSLS Trigger: GGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACTTCTGAGGTGTAACTAAGCGGATGTAGAACTCTGTGGCAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CCA 90 bp | GTGCATTTACTCACTAAGCCTTCCTGCTGGTCCTGTTTTTGTTTTTaGAGAGGCTATGGAACTCAGGATGGCCTGTTACTCAAGCAAATC | + |
Preference number: 1 (lower is better) Translates to: VHLLTKPSCWSCFCF*RGYGTQDGLLLKQI Trigger: GATTTGCTTGAGTAACAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGAAGGCTTAGTGAGTAAATGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 90 bp | CCTGTTACTCAAGCAAATCTTCCTGCCTCAACTTCCCAAATCCTGTaGTTACAGACAAGGGTAGCACTTCTGGCTACGTCCAATTCTAAA | + |
Preference number: 1 (lower is better) Translates to: PVTQANLPASTSQIL*LQTRVALLATSNSK Trigger: TTTAGAATTGGACGTAGCCAGAAGTGCTACCCTTGTCTGTAATCACAGGATTTGGGAAGTTGAGGCAGGAAGATTTGCTTGAGTAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 90 bp | ATTAAGGATGGAGGGTCCTGGAGTATGATAGATGAGATCAACCTCTaGAACAACAGGCTGGGAGAGCAACTAATACAGGATGTAAGACTT | + |
Preference number: 1 (lower is better) Translates to: IKDGGSWSMIDEINL*NNRLGEQLIQDVRL Trigger: AAGTCTTACATCCTGTATTAGTTGCTCTCCCAGCCTGTTGTTTCAGAGGTTGATCTCATCTATCATACTCCAGGACCCTCCATCCTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 90 bp | ACATCTGTGAAGTGTAACTGTTCTCCAGCACTGATATGTAGCATGTaGCTACTTACAGATCTGACATTGTGGGCCACGTTCTTGCAAATG | + |
Preference number: 1 (lower is better) Translates to: TSVKCNCSPALICSM*LLTDLTLWATFLQM Trigger: CATTTGCAAGAACGTGGCCCACAATGTCAGATCTGTAAGTAGTCACATGCTACATATCAGTGCTGGAGAACAGTTACACTTCACAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CCA 90 bp | TATCATTTTCTTCTTTTCACCTCCAAATACACCAGGGAGCGTGTTTaGTGTAAGTGGCTTGGAACAACATATGAGGCAAGGAAGGAGTCT | + |
Preference number: 1 (lower is better) Translates to: YHFLLFTSKYTRERV*CKWLGTTYEARKES Trigger: AGACTCCTTCCTTGCCTCATATGTTGTTCCAAGCCACTTACACCAAACACGCTCCCTGGTGTATTTGGAGGTGAAAAGAAGAAAATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 90 bp | GACTCCACTGAATTAAGTGAGCGCAGAAGAAAAATAAGTGGTACATaGAAGAAGCACAATGTGTGTGAGGAGCACACACATGAGAGAATC | + |
Preference number: 1 (lower is better) Translates to: DSTELSERRRKISGT*KKHNVCEEHTHERI Trigger: GATTCTCTCATGTGTGTGCTCCTCACACACATTGTGCTTCTTTCATGTACCACTTATTTTTCTTCTGCGCTCACTTAATTCAGTGGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 90 bp | TTCATAGTTTCCTGCCATGATGAGTTTAGCAAATTTCCTGGATCCTaGCACATTACAGCGCTCTCCAATGTTAACAAAGTTGGTGTATGG | + |
Preference number: 1 (lower is better) Translates to: FIVSCHDEFSKFPGS*HITALSNVNKVGVW Trigger: CCATACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTGGCAGGATCCAGGAAATTTGCTAAACTCATCATGGCAGGAAACTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR TCA 90 bp | CACTATTTCTGCAGTAAAATTTGGTGTACTGTCAGACGAATTCCCTaGATCTTTCTTCATCTTCAGCAACCTCTAGCCAGTTTTGACCCT | + |
Preference number: 1 (lower is better) Translates to: HYFCSKIWCTVRRIP*IFLHLQQPLASFDP Trigger: AGGGTCAAAACTGGCTAGAGGTTGCTGAAGATGAAGAAAGATTCAGGGAATTCGTCTGACAGTACACCAAATTTTACTGCAGAAATAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR TCA 90 bp | GCAGTGTGGGGAAGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAACGCTTGCCCCAATCATaGGGGCCCAGGAACACCATG | + |
Preference number: 2 (lower is better) Translates to: AVWGSLSTWLLSHSSYTERLPQS*GPRNTM Trigger: CATGGTGTTCCTGGGCCCTCATGATTGGGGCAAGCG...TTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCCCCACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 90 bp | GCCTTCTCCAGGAAGTCCCCCTCCCCCTCCTTGAGGCTGATGCTGTaGACTATGCACTTCCCTTGGCAGCACTTCAACCCAGCTTCAATC | + |
Preference number: 2 (lower is better) Translates to: AFSRKSPSPSLRLML*TMHFPWQHFNPASI Trigger: GATTGAAGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAAGGAGGGGGAGGGGGACTTCCTGGAGAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | GCAGTGTGGGGAAGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAGGCCCAGGAACACCATaGGCCTTGGCACTTTGTTGC | + |
Preference number: 2 (lower is better) Translates to: AVWGSLSTWLLSHSSYTEGPGTP*ALALCC Trigger: GCAACAAAGTGCCAAGGCTCATGGTGTTCCTGGGCC...TTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCCCCACACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 90 bp | ATGCACAGGGGCACCTTGGCAATGTCAGGCTCAGAAGCAATGGAGTaGCAAAATCTGGTCATTGCACTGGGACCATCCAGCATGCCGTCG | + |
Preference number: 2 (lower is better) Translates to: MHRGTLAMSGSEAME*QNLVIALGPSSMPS Trigger: CGACGGCATGCTGGATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTGACATTGCCAAGGTGCCCCTGTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CAA 90 bp | CCCCTCCCCCTCCTTGAGGCTGATGCTGTTGACTATGCACTTCCCTaGGCAGCACTTCAACCCAGCTTCAATCACGGCAAAGTTAGAAGA | + |
Preference number: 2 (lower is better) Translates to: PLPLLEADAVDYALP*AALQPSFNHGKVRR Trigger: TCTTCTAACTTTGCCGTGATTGAAGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAAGGAGGGGGAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | AGGGAGGTTGCCGGCATTGACTATCCCCATGTCCATACCAAACTTGATCGCGTGGATGTGATCAGGTGTTaGACCACAGCATCCACCAAC | + |
Preference number: 2 (lower is better) Translates to: REVAGIDYPHVHTKLDRVDVIRC*TTASTN Trigger: GTTGGTGGATGCTGTGGTTCAACACCTGATCACATC...CACGCGATCAAGTTTGGTATGGACATGGGGATAGTCAATGCCGGCAACCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | ACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATACACAGGGAGGTTGCCGGCTTTCCACCTGTGCTTTaGCAATGCTCAGGGCTTCTT | + |
Preference number: 2 (lower is better) Translates to: TELKKVLVDSIIHREVAGFPPVL*QCSGLL Trigger: AAGAAGCCCTGAGCATTGCCAAAGCACAGGTGGAAA...GCCGGCAACCTCCCTGTGTATGATGCTATCCACAAGGACCTTCTTCAGCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | CATGCATTGCTTCTCGAATGGCTTCCATCCCTCGGAAGGAGAAGGATAAGTTGGATCTGGTCATTGCACTaGGACCATCCAGCATGCCGT | + |
Preference number: 2 (lower is better) Translates to: HALLLEWLPSLGRRRISWIWSLH*DHPACR Trigger: ACGGCATGCTGGATGGTCCCAGTGCAATGACCAGAT...CCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | GTTCCAGATGAGGTCTTCACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATAGGAGGTTGCCGGCATTaGCTATCCCCATGTCCATAC | + |
Preference number: 2 (lower is better) Translates to: VPDEVFTELKKVLVDSIIGGCRH*LSPCPY Trigger: GTATGGACATGGGGATAGTCAATGCCGGCAACCTCC...TATGATGCTATCCACAAGGACCTTCTTCAGCTCTGTGAAGACCTCATCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR GCA 90 bp | GTTCCAGATGAGGTCTTCACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATAGCAAAGTCCTTCAGGTaGGTGGCCATCGTGGATGGT | + |
Preference number: 2 (lower is better) Translates to: VPDEVFTELKKVLVDSIIAKSFR*VAIVDG Trigger: ACCATCCACGATGGCCACGCACCTGAAGGACTTTGC...TATGATGCTATCCACAAGGACCTTCTTCAGCTCTGTGAAGACCTCATCTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR GCA 90 bp | TGCATTGCTTCTCGAATGGCTTCCATCCCTCGGAAGGAGAAGGATAAGTTGGAATCCCATTTCCACCTGTaGTTTGGCAATGCTCAGGGC | + |
Preference number: 2 (lower is better) Translates to: CIASRMASIPRKEKDKLESHFHL*FGNAQG Trigger: GCCCTGAGCATTGCCAAAGCACAGGTGGAAATGGGA...TTCCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | CGTGATAAAGGAACACACCATGCATTGCTTCTCGAATGGCTTCCATCCCTCGGAGGGAAGACCTGCATTTaGGTAACAGAGGACATAGGC | + |
Preference number: 2 (lower is better) Translates to: RDKGTHHALLLEWLPSLGGKTCI*VTEDIG Trigger: GCCTATGTCCTCTGTTACCCAAATGCAGGTCTTCCC...TCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTCCTTTATCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | CATGCATTGCTTCTCGAATGGCTTCCATCCCTCGGAAGGAGAAGGATAAGTTGGACTATGCACTTCCCTTaGCAGCACTTCAACCCAGCT | + |
Preference number: 2 (lower is better) Translates to: HALLLEWLPSLGRRRISWTMHFP*QHFNPA Trigger: AGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGT...CCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR GCA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCTGGGGAAAAGCTGGGTaGCCTGCTTTGAATGCAAAA | + |
Preference number: 2 (lower is better) Translates to: LRAADDNAFGSHFLSSIPWGKAG*PALNAK Trigger: TTTTGCATTCAAAGCAGGGCACCCAGCTTTTCCCCA...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR GCA 90 bp | CGTGATAAAGGAACACACCATGCATTGCTTCTCGAATGGCTTCCATCCCTCGGACCTGTGCTTTGGCAATaGTCAGGGCTTCTTCATAGT | + |
Preference number: 2 (lower is better) Translates to: RDKGTHHALLLEWLPSLGPVLWQ*SGLLHS Trigger: ACTATGAAGAAGCCCTGAGCATTGCCAAAGCACAGG...TCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTCCTTTATCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | GTTCCAGATGAGGTCTTCACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATACGTGGCCATCGTGGATaGTGTTTCATCATAGTCGCC | + |
Preference number: 2 (lower is better) Translates to: VPDEVFTELKKVLVDSIIRGHRG*CFIIVA Trigger: GGCGACTATGATGAAACACCATCCACGATGGCCACG...TATGATGCTATCCACAAGGACCTTCTTCAGCTCTGTGAAGACCTCATCTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CAA 90 bp | TTCCTGGATCCTGCCACATTACAGCGCTCTCCAATGTTAACAAAGTaGGTGTATGGTCCAATCCTGAAGGGCTCTAGACCAGACAGTAAC | + |
Preference number: 2 (lower is better) Translates to: FLDPATLQRSPMLTK*VYGPILKGSRPDSN Trigger: GTTACTGTCTGGTCTAGAGCCCTTCAGGATTGGACCATACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTGGCAGGATCCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGTCAGAGCCTGTGCTCTaGGCAATTTCTCCAGAAATA | + |
Preference number: 2 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLSEPVL*AISPEI Trigger: TATTTCTGGAGAAATTGCTCAGAGCACAGGCTCTGA...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR TCA 90 bp | TGGCAGCACTTCAACCCAGCTTCAATCACGGCAAAGTTAGAAGAGTCAATGCACGCAATTTCCCTGATGTaGTCAGGTGTTGAACCACAG | + |
Preference number: 2 (lower is better) Translates to: WQHFNPASITAKLEESMHAISLM*SGVEPQ Trigger: CTGTGGTTCAACACCTGATCACATCAGGGAAATTGC...GTGCATTGACTCTTCTAACTTTGCCGTGATTGAAGCTGGGTTGAAGTGCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | GTCCATACCAAACTTGATCGCGTGATAAAGGAACACACCATGCATTGCTTCTCGTGTATGGTCCAATCCTaGAGGGCTCTAGACCAGACA | + |
Preference number: 2 (lower is better) Translates to: VHTKLDRVIKEHTMHCFSCMVQS*RALDQT Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCATACA...CGAGAAGCAATGCATGGTGTGTTCCTTTATCACGCGATCAAGTTTGGTATGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR GCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACGCCTTGGCACTTTGTTaGTTCTCATTTAAGGTCCCT | + |
Preference number: 2 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHALALC*FSFKVP Trigger: AGGGACCTTAAATGAGAAGCAACAAAGTGCCAAGGC...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGGAACAAATGCCTTCCTaGGTCAAAGGTAAAAATGGG | + |
Preference number: 2 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLEQMPS*VKGKNG Trigger: CCCATTTTTACCTTTGACCCAGGAAGGCATTTGTTC...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | CACTCTAAGGACCAGTGGTACAAAAAGTGTGTGCTACTTGAAAATAAGCTTGGAGGAAGTCTCAGCACTTaGCTCCTGTCACACAGCAGC | + |
Preference number: 2 (lower is better) Translates to: HSKDQWYKKCVLLENKLGGSLST*LLSHSS Trigger: GCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCC...TCCAAGCTTATTTTCAAGTAGCACACACTTTTTGTACCACTGGTCCTTAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | GCCGGCATTGACTATCCCCATGTCCATACCAAACTTGATCGCGTGATAAAGGAAAACAAAGTTGGTGTATaGTCCAATCCTGAAGGGCTC | + |
Preference number: 2 (lower is better) Translates to: AGIDYPHVHTKLDRVIKENKVGV*SNPEGL Trigger: GAGCCCTTCAGGATTGGACCATACACCAACTTTGTT...TTCCTTTATCACGCGATCAAGTTTGGTATGGACATGGGGATAGTCAATGCCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | AGGTCCTTGTGGATAGCATCATACACAGGGAGGTTGCCGGCATTGACTATCCCCAAAGATGATGTCATTTaGATTGAAGCCCACTTTGTC | + |
Preference number: 2 (lower is better) Translates to: RSLWIASYTGRLPALTIPKDDVI*IEAHFV Trigger: GACAAAGTGGGCTTCAATCCAAATGACATCATCTTT...GGGGATAGTCAATGCCGGCAACCTCCCTGTGTATGATGCTATCCACAAGGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR CAA 90 bp | ATTGCTTCTCGAATGGCTTCCATCCCTCGGAAGGAGAAGGATAAGTaGGAAAGACCTCCACTTATTCTGACTCCTGGTAAGGTTTCCTTA | + |
Preference number: 2 (lower is better) Translates to: IASRMASIPRKEKDK*ERPPLILTPGKVSL Trigger: TAAGGAAACCTTACCAGGAGTCAGAATAAGTGGAGGTCTTTCCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | AGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTGTTACACCTCAGAAGTaGGATGTCACAGGAGAAAAG | + |
Preference number: 2 (lower is better) Translates to: SLSTWLLSHSSYTEKLKSVTPQK*DVTGEK Trigger: CTTTTCTCCTGTGACATCTCACTTCTGAGGTGTAAC...AGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR TCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATCTGTCCAGCAAGCAGTaGGCCTCTGCCACAGAGTTC | + |
Preference number: 2 (lower is better) Translates to: DSPLLPSVAVVHSILLHHLSSKQ*ASATEF Trigger: GAACTCTGTGGCAGAGGCTCACTGCTTGCTGGACAG...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR TCA 90 bp | CACTCTAAGGACCAGTGGTACAAAAAGTGTGTGCTACTTGAAAATAAGCTTGGAGTGCAGGCAAAGAGTTaGGTGGCTTTAAGTCAGCCC | + |
Preference number: 2 (lower is better) Translates to: HSKDQWYKKCVLLENKLGVQAKS*VALSQP Trigger: GGGCTGACTTAAAGCCACTCAACTCTTTGCCTGCAC...TCCAAGCTTATTTTCAAGTAGCACACACTTTTTGTACCACTGGTCCTTAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | ATGAGTCTGGGCATATCGCAAGAGTTTCTCAGTAGCCTCAGAGTCTTTGTTCCATGGAGTTGCAAAATCTaGTCATTGCACTGGGACCAT | + |
Preference number: 2 (lower is better) Translates to: MSLGISQEFLSSLRVFVPWSCKI*SLHWDH Trigger: ATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCA...TGGAACAAAGACTCTGAGGCTACTGAGAAACTCTTGCGATATGCCCAGACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | ATGAGTCTGGGCATATCGCAAGAGTTTCTCAGTAGCCTCAGAGTCTTTGTTCCACAGGCTCAGAAGCAATaGAGTTGCAAAATCTGGTCA | + |
Preference number: 2 (lower is better) Translates to: MSLGISQEFLSSLRVFVPQAQKQ*SCKIWS Trigger: TGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTG...TGGAACAAAGACTCTGAGGCTACTGAGAAACTCTTGCGATATGCCCAGACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CAA 90 bp | GTAAGCTCTGGTGCACACATTGACTTTAACATCTGTTTCTGTTGCTaGTCCTTCCTCATCAAAAGCCATAACCACCACAGCAGCTCCAAA | + |
Preference number: 2 (lower is better) Translates to: VSSGAHIDFNICFCC*SFLIKSHNHHSSSK Trigger: TTTGGAGCTGCTGTGGTGGTTATGGCTTTTGATGAGGAAGGACAAGCAACAGAAACAGATGTTAAAGTCAATGTGTGCACCAGAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCAACCAGGACCTTCCCTaGATACTTCCACCACCAGCC | + |
Preference number: 2 (lower is better) Translates to: PLLPSVAVVHSILLHHDINQDLP*ILPPPA Trigger: GGCTGGTGGTGGAAGTATTCAGGGAAGGTCCTGGTT...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR GCA 90 bp | TTGTCCTTCCTCATCAAAAGCCATAACCACCACAGCAGCTCCAAACTTCTTAATGCAAAATCTGGTCATTaGACTGGGACCATCCAGCAT | + |
Preference number: 2 (lower is better) Translates to: LSFLIKSHNHHSSSKLLNAKSGH*TGTIQH Trigger: ATGCTGGATGGTCCCAGTGCAATGACCAGATTTTGC...ATTAAGAAGTTTGGAGCTGCTGTGGTGGTTATGGCTTTTGATGAGGAAGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGCGTGTTTGGTGTAAGTaGCTTGGAACAACATATGAG | + |
Preference number: 2 (lower is better) Translates to: SIMPLSRLKRLALPLFPVRVWCK*LGTTYE Trigger: CTCATATGTTGTTCCAAGCCACTTACACCAAACACG...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 90 bp | TCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTTaGCTGAAACCACTTAGACTGAAATGTCACATTTCTCACGGTGAG | + |
Preference number: 2 (lower is better) Translates to: SQEKRKEYFSPCPGP*LKPLRLKCHISHGE Trigger: CTCACCGTGAGAAATGTGACATTTCAGTCTAAGTGGTTTCAGCAAAGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 90 bp | GCATACAAGTTATGTTCCTCCATTCCAGTACCAATGGTAAGGATGTaGGGGTCAAAGATGATGTCATTTGGATTGAAGCCCACTTTGTCC | + |
Preference number: 2 (lower is better) Translates to: AYKLCSSIPVPMVRM*GSKMMSFGLKPTLS Trigger: GGACAAAGTGGGCTTCAATCCAAATGACATCATCTTTGACCCCAACATCCTTACCATTGGTACTGGAATGGAGGAACATAACTTGTATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTAGAGCACAAACCAGGTaGGGTTTGGCAGCCTGTGCA | + |
Preference number: 2 (lower is better) Translates to: ERSGIYITFNASIYCPSSRAQTR*GLAACA Trigger: TGCACAGGCTGCCAAACCTCACCTGGTTTGTGCTCT...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR GCA 90 bp | GATGTTGGGGTCAAAGATGATGTCATTTGGATTGAAGCCCACTTTGTCCACAAGCAGAAGCAATGGAGTTaGAAAATCTGGTCATTGCAC | + |
Preference number: 2 (lower is better) Translates to: DVGVKDDVIWIEAHFVHKQKQWS*KIWSLH Trigger: GTGCAATGACCAGATTTTGCAACTCCATTGCTTCTG...CTTGTGGACAAAGTGGGCTTCAATCCAAATGACATCATCTTTGACCCCAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CCA 90 bp | GTCCATACCAAACTTGATCGCGTGATAAAGGAACACACCATGCATTGCTTCTCGAGGAGAAGGATAAGTTaGAAAGACCTCCACTTATTC | + |
Preference number: 2 (lower is better) Translates to: VHTKLDRVIKEHTMHCFSRRRIS*KDLHLF Trigger: GAATAAGTGGAGGTCTTTCCAACTTATCCTTCTCCT...CGAGAAGCAATGCATGGTGTGTTCCTTTATCACGCGATCAAGTTTGGTATGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR TCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATGAGATCAACCTCTaGAACAACAGGCTGGGAGAG | + |
Preference number: 2 (lower is better) Translates to: DSPLLPSVAVVHSILLHHDEINL*NNRLGE Trigger: CTCTCCCAGCCTGTTGTTTCAGAGGTTGATCTCATC...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 90 bp | CTGAAACCACTTAGACTGAAATGTCACATTTCTCACGGTGAGACTTaGCTCCAGGGTTGCGTTTCTCTATATATTCTCCTTGTATTCAAC | + |
Preference number: 2 (lower is better) Translates to: LKPLRLKCHISHGET*LQGCVSLYILLVFN Trigger: GTTGAATACAAGGAGAATATATAGAGAAACGCAACCCTGGAGCAAAGTCTCACCGTGAGAAATGTGACATTTCAGTCTAAGTGGTTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR TCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCGCTATGGATAACACATaGGAGGTGGCTTCTCTTTCT | + |
Preference number: 2 (lower is better) Translates to: PLLPSVAVVHSILLHHDIAMDNT*EVASLS Trigger: AGAAAGAGAAGCCACCTCTCATGTGTTATCCATAGC...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR TCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTGCTTGGAACAACATATaGGGCAAGGAAGGAGTCTGT | + |
Preference number: 2 (lower is better) Translates to: ERSGIYITFNASIYCPSSAWNNI*GKEGVC Trigger: ACAGACTCCTTCCTTGCCTCATATGTTGTTCCAAGC...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR GCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATAAACCCAGGAACAAATaGCTTCCTGGGTCAAAGGTA | + |
Preference number: 2 (lower is better) Translates to: DSPLLPSVAVVHSILLHHKPRNK*LPGSKV Trigger: TACCTTTGACCCAGGAAGGCATTTGTTCCTGGGTTT...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCTTTTCTTCTACCATGTaGGTCCCAGAGCACAAACCA | + |
Preference number: 2 (lower is better) Translates to: PLLPSVAVVHSILLHHDIFSSTM*VPEHKP Trigger: TGGTTTGTGCTCTGGGACCCACATGGTAGAAGAAAA...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATCTTAGCAAAGGTCTTTaGTTTTGGGTGGCACTGATG | + |
Preference number: 2 (lower is better) Translates to: DSPLLPSVAVVHSILLHHLSKGL*FWVALM Trigger: CATCAGTGCCACCCAAAACCAAAGACCTTTGCTAAG...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR GCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTAGGTCCCTGGAAAAGTaGTTCTTTTCCAGAACCCTA | + |
Preference number: 2 (lower is better) Translates to: ERSGIYITFNASIYCPSSRSLEK*FFSRTL Trigger: TAGGGTTCTGGAAAAGAAGCACTTTTCCAGGGACCT...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR GCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATACTTTGCTCCAGGGTTaGGTTTCTCTATATATTCTC | + |
Preference number: 2 (lower is better) Translates to: DSPLLPSVAVVHSILLHHTLLQG*VSLYIL Trigger: GAGAATATATAGAGAAACGCAACCCTGGAGCAAAGT...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTATAACACATGAGAGGTaGCTTCTCTTTCTCTGTCAG | + |
Preference number: 2 (lower is better) Translates to: ERSGIYITFNASIYCPSSITHER*LLFLCQ Trigger: CTGACAGAGAAAGAGAAGCCACCTCTCATGTGTTAT...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCCGTCATGACATCAGTTaGTATAACTGCTGGAAATCT | + |
Preference number: 2 (lower is better) Translates to: PLLPSVAVVHSILLHHDIRHDIS*YNCWKS Trigger: AGATTTCCAGCAGTTATACCAACTGATGTCATGACG...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 90 bp | CTAAGGACCAGTGGTACAAAAAGTGTGTGCTACTTGAAAATAAGCTaGGAAAGATTACAAACATATAGGATTGTCATTACCCAACTATCA | + |
Preference number: 2 (lower is better) Translates to: LRTSGTKSVCYLKIS*ERLQTYRIVITQLS Trigger: TGATAGTTGGGTAATGACAATCCTATATGTTTGTAATCTTTCCAAGCTTATTTTCAAGTAGCACACACTTTTTGTACCACTGGTCCTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR GCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTGGTACAAAAAGTGTGTaGTACTTGAAAATAAGCTTG | + |
Preference number: 2 (lower is better) Translates to: ERSGIYITFNASIYCPSSGTKSV*YLKISL Trigger: CAAGCTTATTTTCAAGTAGCACACACTTTTTGTACC...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 72 bp | AAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTaGATCGCAGTCAACCAGCCTCTCCCAGCAGGGCAG | + |
Preference number: 3 (lower is better) Translates to: KVLLFQNPRGLL*IAVNQPLPAGQ Trigger: CTGCCCTGCTGGGAGAGGCTGGTTGACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | TTGCACTGGGACCATCCAGCATGCCGTCGTCCATGTTaGTATCGAGCACCTGAGCTCCCATTTCCACCTGTG | + |
Preference number: 3 (lower is better) Translates to: LHWDHPACRRPC*YRAPELPFPPV Trigger: CACAGGTGGAAATGGGAGCTCAGGTGCTCGATATCAACATGGACGACGGCATGCTGGATGGTCCCAGTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR-3UTR CAA 90 bp | CGTGATAAAGGAACACACCATGCATTGCTTCTCGAATGGCTTCCATCCCTCGGATCCCCCTCCCCCTCCTaGAGGCTGATGCTGTTGACT | + |
Preference number: 3 (lower is better) Translates to: RDKGTHHALLLEWLPSLGSPSPS*RLMLLT Trigger: AGTCAACAGCATCAGCCTCAAGGAGGGGGAGGGGGA...TCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTCCTTTATCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR GCA 72 bp | GGATCTCAGAGGCCAACTGTGAGGGAACATGCTAGGTaGATGCAATCACACACATCAGGGCCCCGGTTAGAA | + |
Preference number: 3 (lower is better) Translates to: GSQRPTVREHAR*MQSHTSGPRLE Trigger: TTCTAACCGGGGCCCTGATGTGTGTGATTGCATGCACCTAGCATGTTCCCTCACAGTTGGCCTCTGAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CCA 72 bp | ACCATGTGGGTCCCAGAGCACAAACCAGGTGAGGTTTaGCAGCCTGTGCATTTACTCACTAAGCCTTCCTGC | + |
Preference number: 3 (lower is better) Translates to: TMWVPEHKPGEV*QPVHLLTKPSC Trigger: GCAGGAAGGCTTAGTGAGTAAATGCACAGGCTGCCAAACCTCACCTGGTTTGTGCTCTGGGACCCACATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | TCCGCTTGCCCCAATCATGAGGGCCCAGGAACACCATaGGCCTTGGCACTTTGTTGCTTCTCATTTAAGGTC | + |
Preference number: 3 (lower is better) Translates to: SACPNHEGPGTP*ALALCCFSFKV Trigger: GACCTTAAATGAGAAGCAACAAAGTGCCAAGGCTCATGGTGTTCCTGGGCCCTCATGATTGGGGCAAGCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | GGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTaGGCCTCTGCCACAGAGTTCTACATCCGCTTAGTT | + |
Preference number: 3 (lower is better) Translates to: GISVPVRLSSKQ*ASATEFYIRLV Trigger: AACTAAGCGGATGTAGAACTCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 72 bp | TCCCAGAGCACAAACCAGGTGAGGTTTGGCAGCCTGTaGATTTACTCACTAAGCCTTCCTGCTGGTCCTGTT | + |
Preference number: 3 (lower is better) Translates to: SQSTNQVRFGSL*IYSLSLPAGPV Trigger: AACAGGACCAGCAGGAAGGCTTAGTGAGTAAATGCACAGGCTGCCAAACCTCACCTGGTTTGTGCTCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CCA 72 bp | GCCCCAATCATGAGGGCCCAGGAACACCATGAGCCTTaGCACTTTGTTGCTTCTCATTTAAGGTCCCTGGAA | + |
Preference number: 3 (lower is better) Translates to: APIMRAQEHHEP*HFVASHLRSLE Trigger: TTCCAGGGACCTTAAATGAGAAGCAACAAAGTGCCAAGGCTCATGGTGTTCCTGGGCCCTCATGATTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CAA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACCCCTGTCCAGGTCCTTaGCTGAAACCACTTAGACTG | + |
Preference number: 3 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHPCPGP*LKPLRL Trigger: CAGTCTAAGTGGTTTCAGCAAAGGACCTGGACAGGG...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 72 bp | GCACCTTGGCAATGTCAGGCTCAGAAGCAATGGAGTTaGAAAATCTGGTCATTGCACTGGGACCATCCAGCA | + |
Preference number: 3 (lower is better) Translates to: APWQCQAQKQWS*KIWSLHWDHPA Trigger: TGCTGGATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTGACATTGCCAAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 72 bp | CACAGCAAAGTCCTTCAGGTGCGTGGCCATCGTGGATaGTGTTTCATCATAGTCGCCAAAAGTGTTGGGAAG | + |
Preference number: 3 (lower is better) Translates to: HSKVLQVRGHRG*CFIIVAKSVGK Trigger: CTTCCCAACACTTTTGGCGACTATGATGAAACACCATCCACGATGGCCACGCACCTGAAGGACTTTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 72 bp | CATCCACAGCAAAGTCCTTCAGGTGCGTGGCCATCGTaGATGGTGTTTCATCATAGTCGCCAAAAGTGTTGG | + |
Preference number: 3 (lower is better) Translates to: HPQQSPSGAWPS*MVFHHSRQKCW Trigger: CCAACACTTTTGGCGACTATGATGAAACACCATCCACGATGGCCACGCACCTGAAGGACTTTGCTGTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 72 bp | TATCGAGCACCTGAGCTCCCATTTCCACCTGTGCTTTaGCAATGCTCAGGGCTTCTTCATAGTTTCCTGCCA | + |
Preference number: 3 (lower is better) Translates to: YRAPELPFPPVL*QCSGLLHSFLP Trigger: TGGCAGGAAACTATGAAGAAGCCCTGAGCATTGCCAAAGCACAGGTGGAAATGGGAGCTCAGGTGCTCGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 72 bp | ACAGGGGCACCTTGGCAATGTCAGGCTCAGAAGCAATaGAGTTGCAAAATCTGGTCATTGCACTGGGACCAT | + |
Preference number: 3 (lower is better) Translates to: TGAPWQCQAQKQ*SCKIWSLHWDH Trigger: ATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTGACATTGCCAAGGTGCCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CCA 72 bp | TCCTTGAGGCTGATGCTGTTGACTATGCACTTCCCTTaGCAGCACTTCAACCCAGCTTCAATCACGGCAAAG | + |
Preference number: 3 (lower is better) Translates to: SLRLMLLTMHFP*QHFNPASITAK Trigger: CTTTGCCGTGATTGAAGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR TCA 72 bp | CCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTaGGTCCGTGCCTTCAGAGCCTGTGCTCTGAGCAAT | + |
Preference number: 3 (lower is better) Translates to: PVTQQLHRKVKV*VRAFRACALSN Trigger: ATTGCTCAGAGCACAGGCTCTGAAGGCACGGACTCAGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | CTTCAGGTCCTAAACCGAGGCAACCAGGACCTTCCCTaGATACTTCCACCACCAGCCTATCACATTTTTGAG | + |
Preference number: 3 (lower is better) Translates to: LQVLNRGNQDLP*ILPPPAYHIFE Trigger: CTCAAAAATGTGATAGGCTGGTGGTGGAAGTATTCAGGGAAGGTCCTGGTTGCCTCGGTTTAGGACCTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR GCA 72 bp | GTTGATATCGAGCACCTGAGCTCCCATTTCCACCTGTaGTTTGGCAATGCTCAGGGCTTCTTCATAGTTTCC | + |
Preference number: 3 (lower is better) Translates to: VDIEHLSSHFHL*FGNAQGFFIVS Trigger: GGAAACTATGAAGAAGCCCTGAGCATTGCCAAAGCACAGGTGGAAATGGGAGCTCAGGTGCTCGATATCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR CCA 72 bp | AGAAAACGCCTTTGGAGTTGGTTTTCTTCTACCATGTaGGTCCCAGAGCACAAACCAGGTGAGGTTTGGCAG | + |
Preference number: 3 (lower is better) Translates to: RKRLWSWFSSTM*VPEHKPGEVWQ Trigger: CTGCCAAACCTCACCTGGTTTGTGCTCTGGGACCCACATGGTAGAAGAAAACCAACTCCAAAGGCGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR-3UTR CAA 90 bp | GATGAGGTCTTCACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATACACAGGTGGGAAGACCTGCATTaGGGTAACAGAGGACATAGG | + |
Preference number: 3 (lower is better) Translates to: DEVFTELKKVLVDSIIHRWEDLH*GNRGHR Trigger: CCTATGTCCTCTGTTACCCAAATGCAGGTCTTCCCA...CCTGTGTATGATGCTATCCACAAGGACCTTCTTCAGCTCTGTGAAGACCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR-3UTR CAA 90 bp | CCTTGGCAGCACTTCAACCCAGCTTCAATCACGGCAAAGTTAGAAGAGTCAATGTGCAAAATCTGGTCATaGCACTGGGACCATCCAGCA | + |
Preference number: 3 (lower is better) Translates to: PWQHFNPASITAKLEESMCKIWS*HWDHPA Trigger: TGCTGGATGGTCCCAGTGCAATGACCAGATTTTGCA...CATTGACTCTTCTAACTTTGCCGTGATTGAAGCTGGGTTGAAGTGCTGCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR-3UTR CAA 90 bp | AGGGAGGTTGCCGGCATTGACTATCCCCATGTCCATACCAAACTTGATCGCGTGTCAGAAGCAATGGAGTaGCAAAATCTGGTCATTGCA | + |
Preference number: 3 (lower is better) Translates to: REVAGIDYPHVHTKLDRVSEAME*QNLVIA Trigger: TGCAATGACCAGATTTTGCAACTCCATTGCTTCTGA...CACGCGATCAAGTTTGGTATGGACATGGGGATAGTCAATGCCGGCAACCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR TCA 72 bp | CAAGCAAATCTTCCTGCCTCAACTTCCCAAATCCTGTaGTTACAGACAAGGGTAGCACTTCTGGCTACGTCC | + |
Preference number: 3 (lower is better) Translates to: QANLPASTSQIL*LQTRVALLATS Trigger: GGACGTAGCCAGAAGTGCTACCCTTGTCTGTAATCACAGGATTTGGGAAGTTGAGGCAGGAAGATTTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR GCA 72 bp | CTTCTATTTACTGTCCCTCATCTGTTCCTTTCCTGCTaGTCCATCTCTGTTCTTCAGGTCCTAAACCGAGGC | + |
Preference number: 3 (lower is better) Translates to: LLFTVPHLFLSC*SISVLQVLNRG Trigger: GCCTCGGTTTAGGACCTGAAGAACAGAGATGGAGCAGCAGGAAAGGAACAGATGAGGGACAGTAAATAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR CCA 72 bp | CTCACTAAGCCTTCCTGCTGGTCCTGTTTTTGTTTTTaGAGAGGCTATGGAACTCAGGATGGCCTGTTACTC | + |
Preference number: 3 (lower is better) Translates to: LTKPSCWSCFCF*RGYGTQDGLLL Trigger: GAGTAACAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGAAGGCTTAGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR CCA 72 bp | CGTGATAAAGGAACACACCATGCATTGCTTCTCGAATaGCTTCCATCCCTCGGAAGGAGAAGGATAAGTTGG | + |
Preference number: 3 (lower is better) Translates to: RDKGTHHALLLE*LPSLGRRRISW Trigger: CCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTCCTTTATCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR-3UTR CAA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCAACAGACAAGAAACCTaGAAGGATATGACTGTGCCT | + |
Preference number: 3 (lower is better) Translates to: LRAADDNAFGSHFLSSIPNRQET*KDMTVP Trigger: AGGCACAGTCATATCCTTCAAGGTTTCTTGTCTGTT...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR-3UTR CAA 90 bp | ACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATACACAGGGAGGTTGCCGGCAGAGGACATAGGCTGTaGTACATTTTCCAATTGTTT | + |
Preference number: 3 (lower is better) Translates to: TELKKVLVDSIIHREVAGRGHRL*YIFQLF Trigger: AAACAATTGGAAAATGTACAACAGCCTATGTCCTCT...GCCGGCAACCTCCCTGTGTATGATGCTATCCACAAGGACCTTCTTCAGCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR-3UTR CAA 90 bp | GATGTTGGGGTCAAAGATGATGTCATTTGGATTGAAGCCCACTTTGTCCACAAGTTGAGGCTGATGCTGTaGACTATGCACTTCCCTTGG | + |
Preference number: 3 (lower is better) Translates to: DVGVKDDVIWIEAHFVHKLRLML*TMHFPW Trigger: CCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAA...CTTGTGGACAAAGTGGGCTTCAATCCAAATGACATCATCTTTGACCCCAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR TCA 72 bp | CATATGAGGCAAGGAAGGAGTCTGTCTCACACAAGATaGGTCCTGATGCTATGGATAACACATGAGAGGTGG | + |
Preference number: 3 (lower is better) Translates to: HMRQGRSLSHTR*VLMLWITHERW Trigger: CCACCTCTCATGTGTTATCCATAGCATCAGGACTCATCTTGTGTGAGACAGACTCCTTCCTTGCCTCATATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR GCA 72 bp | CACTTTGTTGCTTCTCATTTAAGGTCCCTGGAAAAGTaGTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCA | + |
Preference number: 3 (lower is better) Translates to: HFVASHLRSLEK*FFSRTLEACSA Trigger: TGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGGGACCTTAAATGAGAAGCAACAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR GCA 72 bp | AAACTTGATCGCGTGATAAAGGAACACACCATGCATTaGTTCTCGAATGGCTTCCATCCCTCGGAAGGAGAA | + |
Preference number: 3 (lower is better) Translates to: KLDRVIKEHTMH*FSNGFHPSEGE Trigger: TTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTCCTTTATCACGCGATCAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR CCA 72 bp | CTTCTTTTCACCTCCAAATACACCAGGGAGCGTGTTTaGTGTAAGTGGCTTGGAACAACATATGAGGCAAGG | + |
Preference number: 3 (lower is better) Translates to: LLFTSKYTRERV*CKWLGTTYEAR Trigger: CCTTGCCTCATATGTTGTTCCAAGCCACTTACACCAAACACGCTCCCTGGTGTATTTGGAGGTGAAAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR CCA 72 bp | TGGCAGCCTGTGCATTTACTCACTAAGCCTTCCTGCTaGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACT | + |
Preference number: 3 (lower is better) Translates to: WQPVHLLTKPSC*SCFCFWRGYGT Trigger: AGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGAAGGCTTAGTGAGTAAATGCACAGGCTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR-3UTR CAA 90 bp | GATGAGGTCTTCACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATACACAGGCCAATGTTAACAAAGTaGGTGTATGGTCCAATCCTG | + |
Preference number: 3 (lower is better) Translates to: DEVFTELKKVLVDSIIHRPMLTK*VYGPIL Trigger: CAGGATTGGACCATACACCAACTTTGTTAACATTGG...CCTGTGTATGATGCTATCCACAAGGACCTTCTTCAGCTCTGTGAAGACCTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR GCA 72 bp | ATGCTTCTATTTACTGTCCCTCATCTGTTCCTTTCCTaGTGCTCCATCTCTGTTCTTCAGGTCCTAAACCGA | + |
Preference number: 3 (lower is better) Translates to: MLLFTVPHLFLS*CSISVLQVLNR Trigger: TCGGTTTAGGACCTGAAGAACAGAGATGGAGCAGCAGGAAAGGAACAGATGAGGGACAGTAAATAGAAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | AAGTGTAACTGTTCTCCAGCACTGATATGTAGCATGTaGCTACTTACAGATCTGACATTGTGGGCCACGTTC | + |
Preference number: 3 (lower is better) Translates to: KCNCSPALICSM*LLTDLTLWATF Trigger: GAACGTGGCCCACAATGTCAGATCTGTAAGTAGTCACATGCTACATATCAGTGCTGGAGAACAGTTACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR-3UTR CAA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTGCTTTAAGTCAGCCCTaGGTCCAGCTCTGCACAGGA | + |
Preference number: 3 (lower is better) Translates to: ERSGIYITFNASIYCPSSALSQP*VQLCTG Trigger: TCCTGTGCAGAGCTGGACCAAGGGCTGACTTAAAGC...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR TCA 72 bp | GTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTaGTTCACCTTTATTGCCAAGTGTAGCTGTAGTTCA | + |
Preference number: 3 (lower is better) Translates to: VDSRDLLCPYFL*FTFIAKCSCSS Trigger: TGAACTACAGCTACACTTGGCAATAAAGGTGAATCACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
3UTR GCA 72 bp | TCCTGCCATGATGAGTTTAGCAAATTTCCTGGATCCTaGCACATTACAGCGCTCTCCAATGTTAACAAAGTT | + |
Preference number: 3 (lower is better) Translates to: SCHDEFSKFPGS*HITALSNVNKV Trigger: AACTTTGTTAACATTGGAGAGCGCTGTAATGTGGCAGGATCCAGGAAATTTGCTAAACTCATCATGGCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR GCA 72 bp | TCTGGTGCACACATTGACTTTAACATCTGTTTCTGTTaGTTGTCCTTCCTCATCAAAAGCCATAACCACCAC | + |
Preference number: 3 (lower is better) Translates to: SGAHIDFNICFC*LSFLIKSHNHH Trigger: GTGGTGGTTATGGCTTTTGATGAGGAAGGACAAGCAACAGAAACAGATGTTAAAGTCAATGTGTGCACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
3UTR-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATAGTGCAGGCAAAGAGTaGAGTGGCTTTAAGTCAGCC | + |
Preference number: 3 (lower is better) Translates to: DSPLLPSVAVVHSILLHHSAGKE*SGFKSA Trigger: GGCTGACTTAAAGCCACTCAACTCTTTGCCTGCACT...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATCCTGGAGTTCTGGCCTaGTTCACATCTGTGAAGTGT | + |
Preference number: 3 (lower is better) Translates to: DSPLLPSVAVVHSILLHHPGVLA*FTSVKC Trigger: ACACTTCACAGATGTGAACAAGGCCAGAACTCCAGG...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | TGCAGTAAAATTTGGTGTACTGTCAGACGAATTCCCTaGATCTTTCTTCATCTTCAGCAACCTCTAGCCAGT | + |
Preference number: 3 (lower is better) Translates to: CSKIWCTVRRIP*IFLHLQQPLAS Trigger: ACTGGCTAGAGGTTGCTGAAGATGAAGAAAGATTCAGGGAATTCGTCTGACAGTACACCAAATTTTACTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATCAAAGGTCTTTGGTTTaGGGTGGCACTGATGTAAGC | + |
Preference number: 3 (lower is better) Translates to: DSPLLPSVAVVHSILLHHQRSLV*GGTDVS Trigger: GCTTACATCAGTGCCACCCAAAACCAAAGACCTTTG...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | ACAGTAAACTATATGACAGTGATTCCTTCTCACAGATaGATGTTCCAAAGCCTAAAGAACATGCCTGCCATG | + |
Preference number: 3 (lower is better) Translates to: TVNYMTVIPSHR*MFQSLKNMPAM Trigger: CATGGCAGGCATGTTCTTTAGGCTTTGGAACATTCATCTGTGAGAAGGAATCACTGTCATATAGTTTACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | ATGGGATTAGATCAACGACATATTTGGGGAGCCAGCTaGAAGAATGGCAAGGAAATAAGAAGACTTAGTAAC | + |
Preference number: 3 (lower is better) Translates to: MGLDQRHIWGAS*KNGKEIRRLSN Trigger: GTTACTAAGTCTTCTTATTTCCTTGCCATTCTTTCAGCTGGCTCCCCAAATATGTCGTTGATCTAATCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | GAATTAAGTGAGCGCAGAAGAAAAATAAGTGGTACATaGAAGAAGCACAATGTGTGTGAGGAGCACACACAT | + |
Preference number: 3 (lower is better) Translates to: ELSERRRKISGT*KKHNVCEEHTH Trigger: ATGTGTGTGCTCCTCACACACATTGTGCTTCTTTCATGTACCACTTATTTTTCTTCTGCGCTCACTTAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | AATCTTTCTTCATCTTCAGCAACCTCTAGCCAGTTTTaGCCCTTTGCATTCCACATGAATCATCTGCTTATC | + |
Preference number: 3 (lower is better) Translates to: NLSSSSATSSQF*PFAFHMNHLLI Trigger: GATAAGCAGATGATTCATGTGGAATGCAAAGGGTCAAAACTGGCTAGAGGTTGCTGAAGATGAAGAAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CAA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCCAGATGATAATGCCTTaGGGAGTCACTTTCTCTCTT | + |
Preference number: 3 (lower is better) Translates to: PLLPSVAVVHSILLHHDIQMIMP*GVTFSL Trigger: AAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTG...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATATGGAGAAAACGCCTTaGGAGTTGGTTTTCTTCTAC | + |
Preference number: 3 (lower is better) Translates to: DSPLLPSVAVVHSILLHHMEKTP*ELVFFY Trigger: GTAGAAGAAAACCAACTCCAAAGGCGTTTTCTCCAT...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | TTAGTTATTCCTGTTACTAGCCTGATTATATTGCCATaGCCAAAATGTAAGACATGGCTGAACATGCCTGGA | + |
Preference number: 3 (lower is better) Translates to: LVIPVTSLIILP*PKCKTWLNMPG Trigger: TCCAGGCATGTTCAGCCATGTCTTACATTTTGGTCATGGCAATATAATCAGGCTAGTAACAGGAATAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR TCA 72 bp | GTCATGACATCAGTTGGTATAACTGCTGGAAATCTTTaGCTTTATAGTTCACTTTGGAAAGATCTGGCATCT | + |
Preference number: 3 (lower is better) Translates to: VMTSVGITAGNL*LYSSLWKDLAS Trigger: AGATGCCAGATCTTTCCAAAGTGAACTATAAAGTCAAAGATTTCCAGCAGTTATACCAACTGATGTCATGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | GCAGTGTGGGGAAGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAACTCATGGAGCTCCTCTaGAAAGGCCTCTGCCAGCCT | + |
Preference number: 4 (lower is better) Translates to: AVWGSLSTWLLSHSSYTELMELL*KGLCQP Trigger: AGGCTGGCAGAGGCCTTTGCAGAGGAGCTCCATGAG...TTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCCCCACACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGCTCGGTTCGGGTACTTaGCCCGGAGCTGCCAGACGT | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLLGSGT*PGAARR Trigger: ACGTCTGGCAGCTCCGGGGCAAGTACCCGAACCGAG...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GCAGTGTGGGGAAGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAACAGCCACAAACCTCTTaGCTCCTGTCTGCAGAGTTA | + |
Preference number: 4 (lower is better) Translates to: AVWGSLSTWLLSHSSYTEQPQTS*LLSAEL Trigger: TAACTCTGCAGACAGGAGTCAAGAGGTTTGTGGCTG...TTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCCCCACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGACTTTCTTCCCTCCTGTaGCATGAGTCTGGGCATATC | + |
Preference number: 4 (lower is better) Translates to: RDISSSPSVQQAVSLCHRLSSLL*HESGHI Trigger: GATATGCCCAGACTCATGGCACAGGAGGGAAGAAAG...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCCATCCAGCAGTCCCTTaGCCTGCTCCTGGTATGCGT | + |
Preference number: 4 (lower is better) Translates to: LRAADDNAFGSHFLSSIPHPAVP*PAPGMR Trigger: ACGCATACCAGGAGCAGGCCAAGGGACTGCTGGATG...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GCAGTGTGGGGAAGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAATCCAACCACACCCCTaGCCTGCAGTTTCTTTTGAC | + |
Preference number: 4 (lower is better) Translates to: AVWGSLSTWLLSHSSYTEIQPHP*PAVSFD Trigger: GTCAAAAGAAACTGCAGGCCAGGGGTGTGGTTGGAT...TTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCCCCACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | GGCACCTTGGCAATGTCAGGCTCAGAAGCAATGGAGTaGCAAAATCTGGTCATTGCACTGGGACCATCCAGC | + |
Preference number: 4 (lower is better) Translates to: GTLAMSGSEAME*QNLVIALGPSS Trigger: GCTGGATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTGACATTGCCAAGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR GCA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGATTTTCTGGCCACATCTaGAGAGCACTTGTTCATCCG | + |
Preference number: 4 (lower is better) Translates to: RDISSSPSVQQAVSLCHRFSGHI*RALVHP Trigger: CGGATGAACAAGTGCTCTGCAGATGTGGCCAGAAAA...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | AGGTCCTTGTGGATAGCATCATACACAGGGAGGTTGCCGGCATTGACTATCCCCGGCCTGCTCCTGGTATaGGTCAACAAGCTCATCAAA | + |
Preference number: 4 (lower is better) Translates to: RSLWIASYTGRLPALTIPGLLLV*VNKLIK Trigger: TTTGATGAGCTTGTTGACGCATACCAGGAGCAGGCC...GGGGATAGTCAATGCCGGCAACCTCCCTGTGTATGATGCTATCCACAAGGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
||
CDS-3UTR GCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGGCAAAGTCCTTCAGGTaGGTGGCCATCGTGGATGGT | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLAKSFR*VAIVDG Trigger: ACCATCCACGATGGCCACGCACCTGAAGGACTTTGC...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
||
CDS-3UTR GCA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGAAAATTTCCTGGATCCTaGCACATTACAGCGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: RDISSSPSVQQAVSLCHRKFPGS*HITALS Trigger: GGAGAGCGCTGTAATGTGGCAGGATCCAGGAAATTT...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGACCTGTGCTTTGGCAATaGTCAGGGCTTCTTCATAGT | + |
Preference number: 4 (lower is better) Translates to: RDISSSPSVQQAVSLCHRPVLWQ*SGLLHS Trigger: ACTATGAAGAAGCCCTGAGCATTGCCAAAGCACAGG...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCCGCGCTGTACCGTGGTaGAATTTTAACTGCTGTGTG | + |
Preference number: 4 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVRAVPW*NFNCCV Trigger: CACACAGCAGTTAAAATTGCACCACGGTACAGCGCG...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACTACTTGCCCCGGAGCTaGCAGACGTCAAAGAAAGGC | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHYLPRS*QTSKKG Trigger: GCCTTTCTTTGACGTCTGGCAGCTCCGGGGCAAGTA...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGCCTCAGCGGCTTTTCTaGCCACATCTGCAGAGCACT | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLPQRLF*PHLQST Trigger: AGTGCTCTGCAGATGTGGCCAGAAAAGCCGCTGAGG...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCACTATGCACTTCCCTTaGCAGCACTTCAACCCAGCT | + |
Preference number: 4 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVTMHFP*QHFNPA Trigger: AGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGT...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCAAACGTGGGCTTCACTaGATGAGGTTCAGAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVKRGLH*MRFREP Trigger: TGGCTCTCTGAACCTCATCCAGTGAAGCCCACGTTT...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGCTGGACACTCTGTGCTaGCCAGAATCCAACCACACC | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLLDTLC*PESNHT Trigger: GGTGTGGTTGGATTCTGGCCAGCACAGAGTGTCCAG...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGTCAGTCCATAGAAGGTaGCTATGGGCTCAGCGGCCT | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLSVHRR*LWAQRP Trigger: AGGCCGCTGAGCCCATAGCCACCTTCTATGGACTGA...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACAATGAGACACGCTGGTaGCAAAAGCCTCTCCCGTCT | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHNETRW*QKPLPS Trigger: AGACGGGAGAGGCTTTTGTCACCAGCGTGTCTCATT...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCAGGTCTTCACAGAGCTaGAGAAGGTCCTTGTGGATA | + |
Preference number: 4 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVRSSQS*RRSLWI Trigger: TATCCACAAGGACCTTCTTCAGCTCTGTGAAGACCT...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCGTGGGCTTCACTGGATaGGGTTCAGAGAGCCAATCA | + |
Preference number: 4 (lower is better) Translates to: LRAADDNAFGSHFLSSIPVGFTG*GSESQS Trigger: TGATTGGCTCTCTGAACCTCATCCAGTGAAGCCCAC...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGCCAGCGCCTTCACCATaGTGCTGCTGTAGTCATCGC | + |
Preference number: 4 (lower is better) Translates to: SIMPLSRLKRLALPLFPVPAPSP*CCCSHR Trigger: GCGATGACTACAGCAGCATCATGGTGAAGGCGCTGG...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGAGGATTCTGTCAGCCTaGTGCCTGTGGCCTGCTCGA | + |
Preference number: 4 (lower is better) Translates to: SIMPLSRLKRLALPLFPVRILSA*CLWPAR Trigger: TCGAGCAGGCCACAGGCATCAGGCTGACAGAATCCT...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | CGTGATAAAGGAACACACCATGCATTGCTTCTCGAATGGCTTCCATCCCTCGGACAGCCACAAACCTCTTaGCTCCAAGTGTTCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: RDKGTHHALLLEWLPSLGQPQTS*LQVFKA Trigger: GGCCTTGAACACTTGGAGTCAAGAGGTTTGTGGCTG...TCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTCCTTTATCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR GCA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCGCAAAATCTGGTCATTaGACTGGGACCATCCAGCAT | + |
Preference number: 4 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVAKSGH*TGTIQH Trigger: ATGCTGGATGGTCCCAGTGCAATGACCAGATTTTGC...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGTGGCCAGCACAATGGTaGCTTGGTAAGGGTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLWPAQW*LGKGPL Trigger: AAGAGGACCCTTACCAAGGCACCATTGTGCTGGCCA...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCTTCTTGCCGATGTCATaGACGTCCCCTTTAACAGTG | + |
Preference number: 4 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVFLPMS*TSPLTV Trigger: CACTGTTAAAGGGGACGTGCATGACATCGGCAAGAA...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACCGCCAACTATGTTCTTaGCGATGTCATGCACGTCCC | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHRQLCS*RCHARP Trigger: GGGACGTGCATGACATCGGCAAGAACATAGTTGGCG...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACCCAGGCGCTCTTCAATaGAGCCATTCCTCCACTCAT | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHPGALQ*SHSSTH Trigger: ATGAGTGGAGGAATGGCTCCATTGAAGAGCGCCTGG...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | CTCCTTGAGGCTGATGCTGTTGACTATGCACTTCCCTaGGCAGCACTTCAACCCAGCTTCAATCACGGCAAA | + |
Preference number: 4 (lower is better) Translates to: LLEADAVDYALP*AALQPSFNHGK Trigger: TTTGCCGTGATTGAAGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR TCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGTGTATGGTCCAATCCTaGAGGGCTCTAGACCAGACA | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLCMVQS*RALDQT Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCATACA...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACTTGATATCGAGCACCTaGGCTCCCATTTCCACCTGT | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHLISST*APISTC Trigger: ACAGGTGGAAATGGGAGCTCAGGTGCTCGATATCAA...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GCAGTGTGGGGAAGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAGCCTGCAGTTTCTTTTaGCTAATCAGTATGTTCAGC | + |
Preference number: 4 (lower is better) Translates to: AVWGSLSTWLLSHSSYTEACSFF*LISMFS Trigger: GCTGAACATACTGATTAGTCAAAAGAAACTGCAGGC...TTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCCCCACACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCGGCCTGCTCCTGGTATaGGTCAACAAGCTCATCAAA | + |
Preference number: 4 (lower is better) Translates to: LRAADDNAFGSHFLSSIPGLLLV*VNKLIK Trigger: TTTGATGAGCTTGTTGACGCATACCAGGAGCAGGCC...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | ATGAGTCTGGGCATATCGCAAGAGTTTCTCAGTAGCCTCAGAGTCTTTGTTCCAGTAAGATGTCGACCCTaGCATCCAGCAGTCCCTTGG | + |
Preference number: 4 (lower is better) Translates to: MSLGISQEFLSSLRVFVPVRCRP*HPAVPW Trigger: CCAAGGGACTGCTGGATGGCAGGGTCGACATCTTAC...TGGAACAAAGACTCTGAGGCTACTGAGAAACTCTTGCGATATGCCCAGACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR GCA 90 bp | AGGTCCTTGTGGATAGCATCATACACAGGGAGGTTGCCGGCATTGACTATCCCCGATCGCAAACAAGGCTaGTTTGGCATTAGCTGTATC | + |
Preference number: 4 (lower is better) Translates to: RSLWIASYTGRLPALTIPDRKQG*FGISCI Trigger: GATACAGCTAATGCCAAAGCAGCCTTGTTTGCGATC...GGGGATAGTCAATGCCGGCAACCTCCCTGTGTATGATGCTATCCACAAGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CCA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCGGGAAGACCTGCATTTaGGTAACAGAGGACATAGGC | + |
Preference number: 4 (lower is better) Translates to: LRAADDNAFGSHFLSSIPGKTCI*VTEDIG Trigger: GCCTATGTCCTCTGTTACCCAAATGCAGGTCTTCCC...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGAGGTGGATGTCATCCTaGACACTCTGTGCTGGCCAG | + |
Preference number: 4 (lower is better) Translates to: SIMPLSRLKRLALPLFPVRWMSS*TLCAGQ Trigger: CTGGCCAGCACAGAGTGTCCAGGATGACATCCACCT...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | TTGTGGATAGCATCATACACAGGGAGGTTGCCGGCATaGACTATCCCCATGTCCATACCAAACTTGATCGCG | + |
Preference number: 4 (lower is better) Translates to: LWIASYTGRLPA*TIPMSIPNLIA Trigger: CGCGATCAAGTTTGGTATGGACATGGGGATAGTCAATGCCGGCAACCTCCCTGTGTATGATGCTATCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR TCA 90 bp | GTCCATACCAAACTTGATCGCGTGATAAAGGAACACACCATGCATTGCTTCTCGAATGAGACACGCTGGTaGCAAAAGCCTCTCCCGTCT | + |
Preference number: 4 (lower is better) Translates to: VHTKLDRVIKEHTMHCFSNETRW*QKPLPS Trigger: AGACGGGAGAGGCTTTTGTCACCAGCGTGTCTCATT...CGAGAAGCAATGCATGGTGTGTTCCTTTATCACGCGATCAAGTTTGGTATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR TCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACGCAATTTCCCTGATGTaGTCAGGTGTTGAACCACAG | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHAISLM*SGVEPQ Trigger: CTGTGGTTCAACACCTGATCACATCAGGGAAATTGC...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | ACAGAGCTGAAGAAGGTCCTTGTGGATAGCATCATACACAGGGAGGTTGCCGGCTTAAGATGTCATTGTTaGCTTTCAGTGGCCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: TELKKVLVDSIIHREVAGLRCHC*LSVACC Trigger: ACAGCAGGCCACTGAAAGGCAACAATGACATCTTAA...GCCGGCAACCTCCCTGTGTATGATGCTATCCACAAGGACCTTCTTCAGCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR GCA 90 bp | CACTCTAAGGACCAGTGGTACAAAAAGTGTGTGCTACTTGAAAATAAGCTTGGACTGATGCCTGTGGCCTaGTCGATGCTGGCCAGTCTC | + |
Preference number: 4 (lower is better) Translates to: HSKDQWYKKCVLLENKLGLMPVA*SMLASL Trigger: GAGACTGGCCAGCATCGAGCAGGCCACAGGCATCAG...TCCAAGCTTATTTTCAAGTAGCACACACTTTTTGTACCACTGGTCCTTAGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTTGTACCGCTGGATCATaGTCCCCATCCCACCGTCTA | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPCTAGS*SPSHRL Trigger: TAGACGGTGGGATGGGGACCATGATCCAGCGGTACA...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GATGTTGGGGTCAAAGATGATGTCATTTGGATTGAAGCCCACTTTGTCCACAAGTGTACCGCTGGATCATaGTCCCCATCCCACCGTCTA | + |
Preference number: 4 (lower is better) Translates to: DVGVKDDVIWIEAHFVHKCTAGS*SPSHRL Trigger: TAGACGGTGGGATGGGGACCATGATCCAGCGGTACA...CTTGTGGACAAAGTGGGCTTCAATCCAAATGACATCATCTTTGACCCCAACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CCA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGGCATTGCTTCTCGAATaGCTTCCATCCCTCGGAAGG | + |
Preference number: 4 (lower is better) Translates to: SIMPLSRLKRLALPLFPVALLLE*LPSLGR Trigger: CCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGC...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | TCTGCACAGGACATCAGGGCTCAGCTAACAACCTGTTaGATTCTGAGAGCAGCAGATGATAATGCCTTTGGG | + |
Preference number: 4 (lower is better) Translates to: SAQDIRAQLTTC*ILRAADDNAFG Trigger: CCCAAAGGCATTATCATCTGCTGCTCTCAGAATCAAACAGGTTGTTAGCTGAGCCCTGATGTCCTGTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | CCTGCCACATTACAGCGCTCTCCAATGTTAACAAAGTaGGTGTATGGTCCAATCCTGAAGGGCTCTAGACCA | + |
Preference number: 4 (lower is better) Translates to: PATLQRSPMLTK*VYGPILKGSRP Trigger: TGGTCTAGAGCCCTTCAGGATTGGACCATACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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3UTR CAA 72 bp | CGAATGGCTTCCATCCCTCGGAAGGAGAAGGATAAGTaGGAAAGACCTCCACTTATTCTGACTCCTGGTAAG | + |
Preference number: 4 (lower is better) Translates to: RMASIPRKEKDK*ERPPLILTPGK Trigger: CTTACCAGGAGTCAGAATAAGTGGAGGTCTTTCCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR TCA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCGCTGACTTTATAACCTaGGGTAGAAACATCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVADFIT*GRNIFP Trigger: TGGAAAGATGTTTCTACCTCAGGTTATAAAGTCAGC...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACTTTTCATCTAACAGCTaGGAACACACCACCACACTC | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHFSSNS*EHTTTL Trigger: GAGTGTGGTGGTGTGTTCTCAGCTGTTAGATGAAAA...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GTCCATACCAAACTTGATCGCGTGATAAAGGAACACACCATGCATTGCTTCTCGCTTAGTTTGTACCGCTaGATCATGGTCCCCATCCCA | + |
Preference number: 4 (lower is better) Translates to: VHTKLDRVIKEHTMHCFSLSLYR*IMVPIP Trigger: TGGGATGGGGACCATGATCCAGCGGTACAAACTAAG...CGAGAAGCAATGCATGGTGTGTTCCTTTATCACGCGATCAAGTTTGGTATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CCA 90 bp | AGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTGGTGCGTGGCCATCGTaGATGGTGTTTCATCATAGT | + |
Preference number: 4 (lower is better) Translates to: SLSTWLLSHSSYTEKLKSGAWPS*MVFHHS Trigger: ACTATGATGAAACACCATCCACGATGGCCACGCACC...AGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTATCTGGTCATTGCACTaGGACCATCCAGCATGCCGT | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPIWSLH*DHPACR Trigger: ACGGCATGCTGGATGGTCCCAGTGCAATGACCAGAT...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTGATGTGATCAGGTGTTaGACCACAGCATCCACCAAC | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPDVIRC*TTASTN Trigger: GTTGGTGGATGCTGTGGTTCAACACCTGATCACATC...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGGACCTCCACTTATTCTaGCTCCTGGTAAGGTTTCCT | + |
Preference number: 4 (lower is better) Translates to: SIMPLSRLKRLALPLFPVDLHLF*LLVRFP Trigger: AGGAAACCTTACCAGGAGTCAGAATAAGTGGAGGTC...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGTGTTTCGATGATATCTaGTCCAGCCAGCAAGTATTC | + |
Preference number: 4 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLCFDDI*SSQQVF Trigger: GAATACTTGCTGGCTGGAGCAGATATCATCGAAACA...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CATGCATTGCTTCTCGAATGGCTTCCATCCCTCGGAAGGAGAAGGATAAGTTGGTGTTTCGATGATATCTaGTCCAGCCAGCAAGTATTC | + |
Preference number: 4 (lower is better) Translates to: HALLLEWLPSLGRRRISWCFDDI*SSQQVF Trigger: GAATACTTGCTGGCTGGAGCAGATATCATCGAAACA...CCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR GCA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGAGGCTTCTTCACCTACTaGTTTGTCATTAAATATCTT | + |
Preference number: 4 (lower is better) Translates to: RDISSSPSVQQAVSLCHRGFFTY*FVIKYL Trigger: AAGATATTTAATGACAAAGCAGTAGGTGAAGAAGCC...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTCTTAGTTTGTACCGCTaGATCATGGTCCCCATCCCA | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPLSLYR*IMVPIP Trigger: TGGGATGGGGACCATGATCCAGCGGTACAAACTAAG...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | TGTAAGACATGGCTGAACATGCCTGGAGTTCTGGCCTaGTTCACATCTGTGAAGTGTAACTGTTCTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: CKTWLNMPGVLA*FTSVKCNCSPA Trigger: TGCTGGAGAACAGTTACACTTCACAGATGTGAACAAGGCCAGAACTCCAGGCATGTTCAGCCATGTCTTACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCCAAAAATTGTTTCAATaGGTAAGATGTCGACCCTGC | + |
Preference number: 4 (lower is better) Translates to: LRAADDNAFGSHFLSSIPQKLFQ*VRCRPC Trigger: GCAGGGTCGACATCTTACTCATTGAAACAATTTTTG...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GACTCTTGTTGCATGGATAAAATTGATAGCATACAAGTTATGTTCCTCCATTCCCATCCAGCAGTCCCTTaGCCTGCTCCTGGTATGCGT | + |
Preference number: 4 (lower is better) Translates to: DSCCMDKIDSIQVMFLHSHPAVP*PAPGMR Trigger: ACGCATACCAGGAGCAGGCCAAGGGACTGCTGGATG...GGAATGGAGGAACATAACTTGTATGCTATCAATTTTATCCATGCAACAAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CCA 90 bp | AGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTCAGGCTCAGAAGCAATaGAGTTGCAAAATCTGGTCA | + |
Preference number: 4 (lower is better) Translates to: SLSTWLLSHSSYTEKLKSQAQKQ*SCKIWS Trigger: TGACCAGATTTTGCAACTCCATTGCTTCTGAGCCTG...AGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTATGAAAGGGATAAGGTaGCCAACAGCCTTCTTCATG | + |
Preference number: 4 (lower is better) Translates to: SLSTWLLSHSSYTEKLKSMKGIR*PTAFFM Trigger: CATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCAT...AGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTCATAGAAGGTGGCTATaGGCTCAGCGGCCTGGGGCA | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSHRRWL*AQRPGA Trigger: TGCCCCAGGCCGCTGAGCCCATAGCCACCTTCTATG...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCCGGCGAACTCTCTCATaGAGCTCCTCTGCAAAGGCC | + |
Preference number: 4 (lower is better) Translates to: PLLPSVAVVHSILLHHDIRRTLS*SSSAKA Trigger: GGCCTTTGCAGAGGAGCTCCATGAGAGAGTTCGCCG...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCCCACAGCAAAATATTTaGCCTTTACGTTGGAGAAGT | + |
Preference number: 4 (lower is better) Translates to: LRAADDNAFGSHFLSSIPPQQNI*PLRWRS Trigger: ACTTCTCCAACGTAAAGGCCAAATATTTTGCTGTGG...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTTGTCATAGCCCAGAATaGGACCAAGCCATTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPCHSPE*DQAISP Trigger: TGGAGAAATGGCTTGGTCCCATTCTGGGCTATGACA...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GTCCATACCAAACTTGATCGCGTGATAAAGGAACACACCATGCATTGCTTCTCGCAAGCTCATCAAATGTaGTGTTCCTATAATCTGGCC | + |
Preference number: 4 (lower is better) Translates to: VHTKLDRVIKEHTMHCFSQAHQM*CSYNLA Trigger: GGCCAGATTATAGGAACATCACATTTGATGAGCTTG...CGAGAAGCAATGCATGGTGTGTTCCTTTATCACGCGATCAAGTTTGGTATGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR GCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGTAAGATGTCGACCCTaGCATCCAGCAGTCCCTTGG | + |
Preference number: 4 (lower is better) Translates to: DSPLLPSVAVVHSILLHHVRCRP*HPAVPW Trigger: CCAAGGGACTGCTGGATGGCAGGGTCGACATCTTAC...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACGTATCTTCAACAATGTaGTTTTCAATGCCCTTCACA | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHVSSTM*FSMPFT Trigger: TGTGAAGGGCATTGAAAAGCACATTGTTGAAGATAC...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACAAAGATGATGTCATTTaGATTGAAGCCCACTTTGTC | + |
Preference number: 4 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHKDDVI*IEAHFV Trigger: GACAAAGTGGGCTTCAATCCAAATGACATCATCTTT...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | GGTGCACACATTGACTTTAACATCTGTTTCTGTTGCTaGTCCTTCCTCATCAAAAGCCATAACCACCACAGC | + |
Preference number: 4 (lower is better) Translates to: GAHIDFNICFCC*SFLIKSHNHHS Trigger: GCTGTGGTGGTTATGGCTTTTGATGAGGAAGGACAAGCAACAGAAACAGATGTTAAAGTCAATGTGTGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR TCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTGGAGGTTGCCGGCATTaGCTATCCCCATGTCCATAC | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSGGCRH*LSPCPY Trigger: GTATGGACATGGGGATAGTCAATGCCGGCAACCTCC...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTCGTATTTTCTCTCTTTaGGAGACTCATAGTGGTCCT | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPRIFSL*ETHSGP Trigger: AGGACCACTATGAGTCTCTCAAAGAGAGAAAATACG...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTTTAAGATGTCATTGTTaGCTTTCAGTGGCCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPLRCHC*LSVACC Trigger: ACAGCAGGCCACTGAAAGGCAACAATGACATCTTAA...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCCGTGGCCATCGTGGATaGTGTTTCATCATAGTCGCC | + |
Preference number: 4 (lower is better) Translates to: PLLPSVAVVHSILLHHDIRGHRG*CFIIVA Trigger: GGCGACTATGATGAAACACCATCCACGATGGCCACG...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTCAGTGGCCAGCACAATaGTGCCTTGGTAAGGGTCCT | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSQWPAQ*CLGKGP Trigger: AGGACCCTTACCAAGGCACCATTGTGCTGGCCACTG...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | GATGACATAGGTCATGGGATTAGATCAACGACATATTaGGGGAGCCAGCTGAAAGAATGGCAAGGAAATAAG | + |
Preference number: 4 (lower is better) Translates to: DDIGHGIRSTTY*GSQLKEWQGNK Trigger: CTTATTTCCTTGCCATTCTTTCAGCTGGCTCCCCAAATATGTCGTTGATCTAATCCCATGACCTATGTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTaGCCCCTATTTCCTGTGATTCACCTTTATTGCCAA | + |
Preference number: 4 (lower is better) Translates to: SIMPLSRLKRLA*PLFPVIHLYCQ Trigger: TTGGCAATAAAGGTGAATCACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | TTATGTTCCTCCATTCCAGTACCAATGGTAAGGATGTaGGGGTCAAAGATGATGTCATTTGGATTGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: LCSSIPVPMVRM*GSKMMSFGLKP Trigger: GGGCTTCAATCCAAATGACATCATCTTTGACCCCAACATCCTTACCATTGGTACTGGAATGGAGGAACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR GCA 90 bp | CACTCTAAGGACCAGTGGTACAAAAAGTGTGTGCTACTTGAAAATAAGCTTGGAGATCGCAAACAAGGCTaGTTTGGCATTAGCTGTATC | + |
Preference number: 4 (lower is better) Translates to: HSKDQWYKKCVLLENKLGDRKQG*FGISCI Trigger: GATACAGCTAATGCCAAAGCAGCCTTGTTTGCGATC...TCCAAGCTTATTTTCAAGTAGCACACACTTTTTGTACCACTGGTCCTTAGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTTCCCATTTCCACCTGTaGTTTGGCAATGCTCAGGGC | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSSHFHL*FGNAQG Trigger: GCCCTGAGCATTGCCAAAGCACAGGTGGAAATGGGA...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | AGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTAACATCTGTTTCTGTTaGTTGTCCTTCCTCATCAAA | + |
Preference number: 4 (lower is better) Translates to: SLSTWLLSHSSYTEKLKSNICFC*LSFLIK Trigger: TTTGATGAGGAAGGACAAGCAACAGAAACAGATGTT...AGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTCATTGTATACCTTTCTaGCTTCTTCACCTACTGCTT | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPHCIPF*LLHLLL Trigger: AAGCAGTAGGTGAAGAAGCCAGAAAGGTATACAATG...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | CACTCTAAGGACCAGTGGTACAAAAAGTGTGTGCTACTTGAAAATAAGCTTGGACAAGCTCATCAAATGTaGTGTTCCTATAATCTGGCC | + |
Preference number: 4 (lower is better) Translates to: HSKDQWYKKCVLLENKLGQAHQM*CSYNLA Trigger: GGCCAGATTATAGGAACATCACATTTGATGAGCTTG...TCCAAGCTTATTTTCAAGTAGCACACACTTTTTGTACCACTGGTCCTTAGAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | TTGTCCTTCCTCATCAAAAGCCATAACCACCACAGCAGCTCCAAACTTCTTAATCAAAAATTGTTTCAATaGGTAAGATGTCGACCCTGC | + |
Preference number: 4 (lower is better) Translates to: LSFLIKSHNHHSSSKLLNQKLFQ*VRCRPC Trigger: GCAGGGTCGACATCTTACTCATTGAAACAATTTTTG...ATTAAGAAGTTTGGAGCTGCTGTGGTGGTTATGGCTTTTGATGAGGAAGGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR TCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATCTTCCGCAATTTCCCTaGTGTGATCAGGTGTTGAAC | + |
Preference number: 4 (lower is better) Translates to: DSPLLPSVAVVHSILLHHLPQFP*CDQVLN Trigger: GTTCAACACCTGATCACATCAGGGAAATTGCGGAAG...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATAATGCAAAGGAGCAATaGAGTCTGAGAGGCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: DSPLLPSVAVVHSILLHHNAKEQ*SLRGSG Trigger: ACCACTGCCTCTCAGACTTCATTGCTCCTTTGCATT...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CACTCTAAGGACCAGTGGTACAAAAAGTGTGTGCTACTTGAAAATAAGCTTGGACAGAAGCAATGGAGTTaGAAAATCTGGTCATTGCAC | + |
Preference number: 4 (lower is better) Translates to: HSKDQWYKKCVLLENKLGQKQWS*KIWSLH Trigger: GTGCAATGACCAGATTTTGCAACTCCATTGCTTCTG...TCCAAGCTTATTTTCAAGTAGCACACACTTTTTGTACCACTGGTCCTTAGAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTACCTCTCCATTTCCTTaGCAACAAAAATCATCTCAT | + |
Preference number: 4 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPTSPFP*QQKSSH Trigger: ATGAGATGATTTTTGTTGCCAAGGAAATGGAGAGGT...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCGAACACACCATGCATTaGTTCTCGAATGGCTTCCAT | + |
Preference number: 4 (lower is better) Translates to: PLLPSVAVVHSILLHHDIEHTMH*FSNGFH Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTC...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCAACAAAGTTGGTGTATaGTCCAATCCTGAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: PLLPSVAVVHSILLHHDINKVGV*SNPEGL Trigger: GAGCCCTTCAGGATTGGACCATACACCAACTTTGTT...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTTTTCCACCTGTGCTTTaGCAATGCTCAGGGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSFPPVL*QCSGLL Trigger: AAGAAGCCCTGAGCATTGCCAAAGCACAGGTGGAAA...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATTGGAGTTGCAAAATCTaGTCATTGCACTGGGACCAT | + |
Preference number: 4 (lower is better) Translates to: DSPLLPSVAVVHSILLHHWSCKI*SLHWDH Trigger: ATGGTCCCAGTGCAATGACCAGATTTTGCAACTCCA...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCATTTGGCCTTTACGTTaGAGAAGTACAGCCCTGACA | + |
Preference number: 4 (lower is better) Translates to: PLLPSVAVVHSILLHHDIIWPLR*RSTALT Trigger: TGTCAGGGCTGTACTTCTCCAACGTAAAGGCCAAAT...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR TCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTTGGAGTGATGAGTCCTaGCAAGCCAATTATATCTGC | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSWSDES*QANYIC Trigger: GCAGATATAATTGGCTTGTCAGGACTCATCACTCCA...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCTCACAGACACCAGAATaGAAAGGAGCAATGAAGTCT | + |
Preference number: 4 (lower is better) Translates to: PLLPSVAVVHSILLHHDISQTPE*KGAMKS Trigger: AGACTTCATTGCTCCTTTGCATTCTGGTGTCTGTGA...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTTGTGGGTTCTTGAAGTaGTTGCTCCTCCTATCAACA | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSCGFLK*LLLLST Trigger: TGTTGATAGGAGGAGCAACCACTTCAAGAACCCACA...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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3UTR CAA 72 bp | AAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTTaGCTGAAACCACTTAGACTGAAATGTCACATTTCT | + |
Preference number: 4 (lower is better) Translates to: KRKEYFSPCPGP*LKPLRLKCHIS Trigger: AGAAATGTGACATTTCAGTCTAAGTGGTTTCAGCAAAGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR GCA 90 bp | CCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGATATCCAATGTGCTTTTCAATaGCCTTCACAAGAGCATACT | + |
Preference number: 4 (lower is better) Translates to: PLLPSVAVVHSILLHHDIQCAFQ*PSQEHT Trigger: AGTATGCTCTTGTGAAGGGCATTGAAAAGCACATTG...GATATCATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATAGGAGAAGGATAAGTTaGAAAGACCTCCACTTATTC | + |
Preference number: 4 (lower is better) Translates to: DSPLLPSVAVVHSILLHHRRRIS*KDLHLF Trigger: GAATAAGTGGAGGTCTTTCCAACTTATCCTTCTCCT...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATTTTCCCCGTTTAACCTaGCTTCTTCAGTATCTTCAA | + |
Preference number: 4 (lower is better) Translates to: DSPLLPSVAVVHSILLHHFPRLT*LLQYLQ Trigger: TTGAAGATACTGAAGAAGCCAGGTTAAACGGGGAAA...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CCA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTATTTTAACTGCTGTGTaGGTTCTTGAAGTGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: ERSGIYITFNASIYCPSSILTAV*VLEVVA Trigger: AGCAACCACTTCAAGAACCCACACAGCAGTTAAAAT...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 90 bp | TCTCAGTATGGTCAGGCTGGCTGGGGTAACCAGGAGCTGGCCGGATaGCCTCATACCGGAGTCTGCGCAAGTCTGGGACGCCCAACTGCT | + |
Preference number: 5 (lower is better) Translates to: SQYGQAGWGNQELAG*PHTGVCASLGRPTA Trigger: AGCAGTTGGGCGTCCCAGACTTGCGCAGACTCCGGTATGAGGGCATCCGGCCAGCTCCTGGTTACCCCAGCCAGCCTGACCATACTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 90 bp | GGTAAGCTTCTCAGTATGGTCAGGCTGGCTGGGGTAACCAGGAGCTaGCCGGATGCCCTCATACCGGAGTCTGCGCAAGTCTGGGACGCC | + |
Preference number: 5 (lower is better) Translates to: GKLLSMVRLAGVTRS*PDALIPESAQVWDA Trigger: GGCGTCCCAGACTTGCGCAGACTCCGGTATGAGGGCATCCGGCCAGCTCCTGGTTACCCCAGCCAGCCTGACCATACTGAGAAGCTTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 90 bp | GCTATGGGCTCAGCGGCCTGGGGCACCACCCCCTCTGCATACAGGTaGATGTCATCCTGGACACTCTGTGCTGGCCAGAATCCAACCACA | + |
Preference number: 5 (lower is better) Translates to: AMGSAAWGTTPSAYR*MSSWTLCAGQNPTT Trigger: TGTGGTTGGATTCTGGCCAGCACAGAGTGTCCAGGATGACATCCACCTGTATGCAGAGGGGGTGGTGCCCCAGGCCGCTGAGCCCATAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 90 bp | AAGAGTCCTTCTCAGCCTGCTGCCTCAGTCCATAGAAGGTGGCTATaGGCTCAGCGGCCTGGGGCACCACCCCCTCTGCATACAGGTGGA | + |
Preference number: 5 (lower is better) Translates to: KSPSQPAASVHRRWL*AQRPGAPPPLHTGG Trigger: TCCACCTGTATGCAGAGGGGGTGGTGCCCCAGGCCGCTGAGCCCATAGCCACCTTCTATGGACTGAGGCAGCAGGCTGAGAAGGACTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GCAGTGTGGGGAAGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAACCTCGGTTCGGGTACTaGCCCCGGAGCTGCCAGACG | + |
Preference number: 5 (lower is better) Translates to: AVWGSLSTWLLSHSSYTEPRFGY*PRSCQT Trigger: CGTCTGGCAGCTCCGGGGCAAGTACCCGAACCGAGG...TTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACTTCCCCACACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 90 bp | ATAGAAGGTGGCTATGGGCTCAGCGGCCTGGGGCACCACCCCCTCTaGATACAGGTGGATGTCATCCTGGACACTCTGTGCTGGCCAGAA | + |
Preference number: 5 (lower is better) Translates to: IEGGYGLSGLGHHPL*IQVDVILDTLCWPE Trigger: TTCTGGCCAGCACAGAGTGTCCAGGATGACATCCACCTGTATGCAGAGGGGGTGGTGCCCCAGGCCGCTGAGCCCATAGCCACCTTCTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 90 bp | CCTCTGCAAAGGCCTCTGCCAGCCTGTCGCCCAGCGCCTTCACCATaGTGCTGCTGTAGTCATCGCCATCATCCTCATAGGTCTTACTCA | + |
Preference number: 5 (lower is better) Translates to: PLQRPLPACRPAPSP*CCCSHRHHPHRSYS Trigger: TGAGTAAGACCTATGAGGATGATGGCGATGACTACAGCAGCATCATGGTGAAGGCGCTGGGCGACAGGCTGGCAGAGGCCTTTGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCCACACCACCACACTCTaGGATGCATCTAGGACGTGG | + |
Preference number: 5 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVHTTTL*DASRTW Trigger: CCACGTCCTAGATGCATCCAAGAGTGTGGTGGTGTG...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 90 bp | GCTGCACCCAGAGAACAATTTAATCCAATGCACAGGGGGTCCGAATaGGACACGCTGGTGACAAAAGCCTCTCCCGTCTGCCCAGAAAGA | + |
Preference number: 5 (lower is better) Translates to: AAPREQFNPMHRGSE*DTLVTKASPVCPER Trigger: TCTTTCTGGGCAGACGGGAGAGGCTTTTGTCACCAGCGTGTCTCATTCGGACCCCCTGTGCATTGGATTAAATTGTTCTCTGGGTGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGATGGGAAGACCTGCATTaGGGTAACAGAGGACATAGG | + |
Preference number: 5 (lower is better) Translates to: RDISSSPSVQQAVSLCHRWEDLH*GNRGHR Trigger: CCTATGTCCTCTGTTACCCAAATGCAGGTCTTCCCA...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 90 bp | GTTTGTACCGCTGGATCATGGTCCCCATCCCACCGTCTAGCACCATaGTCCTCTTCCGAAGAATGGCTTCAATCTCATCCTGCAGGGTTT | + |
Preference number: 5 (lower is better) Translates to: VCTAGSWSPSHRLAP*SSSEEWLQSHPAGF Trigger: AAACCCTGCAGGATGAGATTGAAGCCATTCTTCGGAAGAGGATCATGGTGCTAGACGGTGGGATGGGGACCATGATCCAGCGGTACAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099856.6 ENSMUST00000221290.2 |
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CDS GCA 90 bp | TCCTGTCTGCAGAGTTATCTCCTCAGCGGCTTTTCTGGCCACATCTaGAGAGCACTTGTTCATCCGGTAGGCCAAGTGTTCAAGGCCATA | + |
Preference number: 5 (lower is better) Translates to: SCLQSYLLSGFSGHI*RALVHPVGQVFKAI Trigger: TATGGCCTTGAACACTTGGCCTACCGGATGAACAAGTGCTCTGCAGATGTGGCCAGAAAAGCCGCTGAGGAGATAACTCTGCAGACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCCTTAAGATGTCATTGTaGCCTTTCAGTGGCCTGCTG | + |
Preference number: 5 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVLKMSL*PFSGLL Trigger: CAGCAGGCCACTGAAAGGCAACAATGACATCTTAAG...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGACCCACAGCAAAATATTaGGCCTTTACGTTGGAGAAG | + |
Preference number: 5 (lower is better) Translates to: RDISSSPSVQQAVSLCHRPTAKY*AFTLEK Trigger: CTTCTCCAACGTAAAGGCCAAATATTTTGCTGTGGG...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 90 bp | AACAATTTAATCCAATGCACAGGGGGTCCGAATGAGACACGCTGGTaGCAAAAGCCTCTCCCGTCTGCCCAGAAAGAGTCCTTCCACTTT | + |
Preference number: 5 (lower is better) Translates to: NNLIQCTGGPNETRW*QKPLPSAQKESFHF Trigger: AAAGTGGAAGGACTCTTTCTGGGCAGACGGGAGAGGCTTTTGTCACCAGCGTGTCTCATTCGGACCCCCTGTGCATTGGATTAAATTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 90 bp | TTCCTCCACTCATCTGTCTGGATGACTTTCTTCCCTCCTGTGCCATaGGTCTGGGCATATCGCAAGAGTTTCTCAGTAGCCTCAGAGTCT | + |
Preference number: 5 (lower is better) Translates to: FLHSSVWMTFFPPVP*VWAYRKSFSVASES Trigger: AGACTCTGAGGCTACTGAGAAACTCTTGCGATATGCCCAGACTCATGGCACAGGAGGGAAGAAAGTCATCCAGACAGATGAGTGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 90 bp | GTCATAGCCCAGAATGGGACCAAGCCATTTCTCCACCTCGGCCACTaGCATGTTCTTCCTCAAAGCATAATCCTCAGTCTGATCTTTGGA | + |
Preference number: 5 (lower is better) Translates to: VIAQNGTKPFLHLGH*HVLPQSIILSLIFG Trigger: TCCAAAGATCAGACTGAGGATTATGCTTTGAGGAAGAACATGCCAGTGGCCGAGGTGGAGAAATGGCTTGGTCCCATTCTGGGCTATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | CCTGGAAAAGTGCTTCTTTTCCAGAACCCTAGAGGCCTGCTCTGCATCGCAGTCTGTTCTTCACTTAGTTaGTACCGCTGGATCATGGTC | + |
Preference number: 5 (lower is better) Translates to: PGKVLLFQNPRGLLCIAVCSSLS*YRWIMV Trigger: GACCATGATCCAGCGGTACAAACTAAGTGAAGAACA...GACTGCGATGCAGAGCAGGCCTCTAGGGTTCTGGAAAAGAAGCACTTTTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCGGAACACACCATGCATaGCTTCTCGAATGGCTTCCA | + |
Preference number: 5 (lower is better) Translates to: LRAADDNAFGSHFLSSIPGTHHA*LLEWLP Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGTGTGTTCC...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGATTGTCATTAAATATCTaGGGAAATCCTCGGTTCGGG | + |
Preference number: 5 (lower is better) Translates to: RDISSSPSVQQAVSLCHRLSLNI*GNPRFG Trigger: CCCGAACCGAGGATTTCCCAAGATATTTAATGACAA...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | TCCTGCTGGTCCTGTTTTTGTTTTTGGAGAGGCTATGGAACTCAGGATGGCCTGGTAGCCTCAGAGTCTTaGTTCCAGATGAGGTCTTCA | + |
Preference number: 5 (lower is better) Translates to: SCWSCFCFWRGYGTQDGLVASES*FQMRSS Trigger: TGAAGACCTCATCTGGAACAAAGACTCTGAGGCTAC...CAGGCCATCCTGAGTTCCATAGCCTCTCCAAAAACAAAAACAGGACCAGCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGACGCCAACTATGTTCTaGCCGATGTCATGCACGTCC | + |
Preference number: 5 (lower is better) Translates to: SIMPLSRLKRLALPLFPVTPTMF*PMSCTS Trigger: GGACGTGCATGACATCGGCAAGAACATAGTTGGCGT...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGGGATATCAGTTCCAGTCCGTCTGTCCAGCAAGCAGTGAGCCTCTGCCACAGAAACCTCTCCATTTCCTaGGCAACAAAAATCATCTCA | + |
Preference number: 5 (lower is better) Translates to: RDISSSPSVQQAVSLCHRNLSIS*ATKIIS Trigger: TGAGATGATTTTTGTTGCCAAGGAAATGGAGAGGTT...TCTGTGGCAGAGGCTCACTGCTTGCTGGACAGACGGACTGGAACTGATATCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GTCCATACCAAACTTGATCGCGTGATAAAGGAACACACCATGCATTGCTTCTCGCCAGCCACAAACCTCTaGACTCCAAGTGTTCAAGGC | + |
Preference number: 5 (lower is better) Translates to: VHTKLDRVIKEHTMHCFSPATNL*TPSVQG Trigger: GCCTTGAACACTTGGAGTCAAGAGGTTTGTGGCTGG...CGAGAAGCAATGCATGGTGTGTTCCTTTATCACGCGATCAAGTTTGGTATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CAA 90 bp | AGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTTGCAAAATCTGGTCATaGCACTGGGACCATCCAGCA | + |
Preference number: 5 (lower is better) Translates to: SLSTWLLSHSSYTEKLKSCKIWS*HWDHPA Trigger: TGCTGGATGGTCCCAGTGCAATGACCAGATTTTGCA...AGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGTTGAGGCTGATGCTGTaGACTATGCACTTCCCTTGG | + |
Preference number: 5 (lower is better) Translates to: SIMPLSRLKRLALPLFPVLRLML*TMHFPW Trigger: CCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAA...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGCATCATGCCATTGAGTAGACTCAAGAGACTTGCTTTGCCCCTATTTCCTGTGGTGGTCCAGAGCAGCTaGAAGTATCTTATCACAGGG | + |
Preference number: 5 (lower is better) Translates to: SIMPLSRLKRLALPLFPVVVQSS*KYLITG Trigger: CCCTGTGATAAGATACTTCAAGCTGCTCTGGACCAC...CACAGGAAATAGGGGCAAAGCAAGTCTCTTGAGTCTACTCAATGGCATGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | CCTTGGCAGCACTTCAACCCAGCTTCAATCACGGCAAAGTTAGAAGAGTCAATGTGTTCTTCACTTAGTTaGTACCGCTGGATCATGGTC | + |
Preference number: 5 (lower is better) Translates to: PWQHFNPASITAKLEESMCSSLS*YRWIMV Trigger: GACCATGATCCAGCGGTACAAACTAAGTGAAGAACA...CATTGACTCTTCTAACTTTGCCGTGATTGAAGCTGGGTTGAAGTGCTGCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CAA 90 bp | CTGAGAGCAGCAGATGATAATGCCTTTGGGAGTCACTTTCTCTCTTCCATCCCCGCAAACAAGGCTGCTTaGGCATTAGCTGTATCAAAA | + |
Preference number: 5 (lower is better) Translates to: LRAADDNAFGSHFLSSIPANKAA*ALAVSK Trigger: TTTTGATACAGCTAATGCCAAAGCAGCCTTGTTTGC...GGGGATGGAAGAGAGAAAGTGACTCCCAAAGGCATTATCATCTGCTGCTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GCTCAAAGGAGAAAGTTACCAAGACTACTATCCCTAGGCCCTAGTACCAGCCACCCAATGTTAACAAAGTaGGTGTATGGTCCAATCCTG | + |
Preference number: 5 (lower is better) Translates to: AQRRKLPRLLSLGPSTSHPMLTK*VYGPIL Trigger: CAGGATTGGACCATACACCAACTTTGTTAACATTGG...GTGGCTGGTACTAGGGCCTAGGGATAGTAGTCTTGGTAACTTTCTCCTTTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATTCCCCCTCCCCCTCCTaGAGGCTGATGCTGTTGACT | + |
Preference number: 5 (lower is better) Translates to: DSPLLPSVAVVHSILLHHSPSPS*RLMLLT Trigger: AGTCAACAGCATCAGCCTCAAGGAGGGGGAGGGGGA...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 90 bp | CGTTTAACCTGGCTTCTTCAGTATCTTCAACAATGTGCTTTTCAATaGCCTTCACAAGAGCATACTCCAGGCGCTCTTCAATGGAGCCAT | + |
Preference number: 5 (lower is better) Translates to: RLTWLLQYLQQCAFQ*PSQEHTPGALQWSH Trigger: ATGGCTCCATTGAAGAGCGCCTGGAGTATGCTCTTGTGAAGGGCATTGAAAAGCACATTGTTGAAGATACTGAAGAAGCCAGGTTAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | ACCAACTATATTCACCAAGCCATCCACAGCAAAGTCCTTCAGGTGCGTGGCCATGTGATCTTTAAACTCTaGACCTTGGAAATGTTCTTC | + |
Preference number: 5 (lower is better) Translates to: TNYIHQAIHSKVLQVRGHVIFKL*TLEMFF Trigger: GAAGAACATTTCCAAGGTCAAGAGTTTAAAGATCAC...ATGGCCACGCACCTGAAGGACTTTGCTGTGGATGGCTTGGTGAATATAGTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CAA 90 bp | CCAATGTTAACAAAGTTGGTGTATGGTCCAATCCTGAAGGGCTCTAGACCAGACGCAAACAAGGCTGCTTaGGCATTAGCTGTATCAAAA | + |
Preference number: 5 (lower is better) Translates to: PMLTKLVYGPILKGSRPDANKAA*ALAVSK Trigger: TTTTGATACAGCTAATGCCAAAGCAGCCTTGTTTGC...GTCTGGTCTAGAGCCCTTCAGGATTGGACCATACACCAACTTTGTTAACATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221290.2 |
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CDS-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATGGGAGGTTGCCGGCATaGACTATCCCCATGTCCATA | + |
Preference number: 5 (lower is better) Translates to: DSPLLPSVAVVHSILLHHGRLPA*TIPMSI Trigger: TATGGACATGGGGATAGTCAATGCCGGCAACCTCCC...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATTCATACACAGGGAGGTaGCCGGCATTGACTATCCCC | + |
Preference number: 5 (lower is better) Translates to: DSPLLPSVAVVHSILLHHSYTGR*PALTIP Trigger: GGGGATAGTCAATGCCGGCAACCTCCCTGTGTATGA...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTTCAGAAGCAATGGAGTaGCAAAATCTGGTCATTGCA | + |
Preference number: 5 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPSEAME*QNLVIA Trigger: TGCAATGACCAGATTTTGCAACTCCATTGCTTCTGA...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTGACTATGCACTTCCCTaGGCAGCACTTCAACCCAGC | + |
Preference number: 5 (lower is better) Translates to: ERSGIYITFNASIYCPSSDYALP*AALQPS Trigger: GCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGTC...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGTCTCAGCACTTGGCTCCTGTCACACAGCAGCTACACAGAAAAGTTAAAGTCTAAGGAGAAGGATAAGTaGGAAAGACCTCCACTTATT | + |
Preference number: 5 (lower is better) Translates to: SLSTWLLSHSSYTEKLKSKEKDK*ERPPLI Trigger: AATAAGTGGAGGTCTTTCCAACTTATCCTTCTCCTT...AGACTTTAACTTTTCTGTGTAGCTGCTGTGTGACAGGAGCCAAGTGCTGAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATCAGCACAATGGTGCCTaGGTAAGGGTCCTCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: DSPLLPSVAVVHSILLHHQHNGA*VRVLFF Trigger: GAAGAAGAGGACCCTTACCAAGGCACCATTGTGCTG...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 90 bp | AGTCCTGACAAGCCAATTATATCTGCTTTGTGGTCCAGAGCAGCTTaGAGTATCTTATCACAGGGAGTCATGACTCCTAAATCAATAACT | + |
Preference number: 5 (lower is better) Translates to: SPDKPIISALWSRAA*SILSQGVMTPKSIT Trigger: AGTTATTGATTTAGGAGTCATGACTCCCTGTGATAAGATACTTCAAGCTGCTCTGGACCACAAAGCAGATATAATTGGCTTGTCAGGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTGTGATCTTTAAACTCTaGACCTTGGAAATGTTCTTC | + |
Preference number: 5 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPVIFKL*TLEMFF Trigger: GAAGAACATTTCCAAGGTCAAGAGTTTAAAGATCAC...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | AGTGAGATGTCACAGGAGAAAAGAAAGGAATACTTTTCTCCCTGTCCAGGTCCTTCTTCACCTACTGCTTaGTCATTAAATATCTTGGGA | + |
Preference number: 5 (lower is better) Translates to: SEMSQEKRKEYFSPCPGPSSPTA*SLNILG Trigger: TCCCAAGATATTTAATGACAAAGCAGTAGGTGAAGA...AGGACCTGGACAGGGAGAAAAGTATTCCTTTCTTTTCTCCTGTGACATCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 90 bp | CTGGGCGATACTAGTACTGCTGAAAGTGTTTGTTTCGATGATATCTaGTCCAGCCAGCAAGTATTCCTTATGAATCTGGTAAATAATATC | + |
Preference number: 5 (lower is better) Translates to: LGDTSTAESVCFDDI*SSQQVFLMNLVNNI Trigger: GATATTATTTACCAGATTCATAAGGAATACTTGCTGGCTGGAGCAGATATCATCGAAACAAACACTTTCAGCAGTACTAGTATCGCCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099856.6 ENSMUST00000221290.2 |
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CDS GCA 90 bp | CATATTCTGAGCATCATTGTATACCTTTCTGGCTTCTTCACCTACTaGTTTGTCATTAAATATCTTGGGAAATCCTCGGTTCGGGTACTT | + |
Preference number: 5 (lower is better) Translates to: HILSIIVYLSGFFTY*FVIKYLGKSSVRVL Trigger: AAGTACCCGAACCGAGGATTTCCCAAGATATTTAATGACAAAGCAGTAGGTGAAGAAGCCAGAAAGGTATACAATGATGCTCAGAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATTCAATAACTCTGAAATaGTTACAGGCCAGCACCACG | + |
Preference number: 5 (lower is better) Translates to: DSPLLPSVAVVHSILLHHSITLK*LQASTT Trigger: CGTGGTGCTGGCCTGTAACAATTTCAGAGTTATTGA...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GAAAGATCTGGCATCTATATAACCTTTAATGCTTCTATTTACTGTCCCTCATCTATGATGTCATTTGGATaGAAGCCCACTTTGTCCACA | + |
Preference number: 5 (lower is better) Translates to: ERSGIYITFNASIYCPSSMMSFG*KPTLST Trigger: TGTGGACAAAGTGGGCTTCAATCCAAATGACATCAT...AGATGAGGGACAGTAAATAGAAGCATTAAAGGTTATATAGATGCCAGATCTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS-3UTR CAA 90 bp | GATTCACCTTTATTGCCAAGTGTAGCTGTAGTTCACTCAATTTTACTGCATCATAGAGGACATAGGCTGTaGTACATTTTCCAATTGTTT | + |
Preference number: 5 (lower is better) Translates to: DSPLLPSVAVVHSILLHHRGHRL*YIFQLF Trigger: AAACAATTGGAAAATGTACAACAGCCTATGTCCTCT...ATGATGCAGTAAAATTGAGTGAACTACAGCTACACTTGGCAATAAAGGTGAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 72 bp | GGTCAGGCTGGCTGGGGTAACCAGGAGCTGGCCGGATaGCCTCATACCGGAGTCTGCGCAAGTCTGGGACGC | + |
Preference number: 6 (lower is better) Translates to: GQAGWGNQELAG*PHTGVCASLGR Trigger: GCGTCCCAGACTTGCGCAGACTCCGGTATGAGGGCATCCGGCCAGCTCCTGGTTACCCCAGCCAGCCTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 72 bp | GGCTATGGGCTCAGCGGCCTGGGGCACCACCCCCTCTaGATACAGGTGGATGTCATCCTGGACACTCTGTGC | + |
Preference number: 6 (lower is better) Translates to: GYGLSGLGHHPL*IQVDVILDTLC Trigger: GCACAGAGTGTCCAGGATGACATCCACCTGTATGCAGAGGGGGTGGTGCCCCAGGCCGCTGAGCCCATAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 72 bp | TCTCAGCCTGCTGCCTCAGTCCATAGAAGGTGGCTATaGGCTCAGCGGCCTGGGGCACCACCCCCTCTGCAT | + |
Preference number: 6 (lower is better) Translates to: SQPAASVHRRWL*AQRPGAPPPLH Trigger: ATGCAGAGGGGGTGGTGCCCCAGGCCGCTGAGCCCATAGCCACCTTCTATGGACTGAGGCAGCAGGCTGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 72 bp | AGTCCTTCTCAGCCTGCTGCCTCAGTCCATAGAAGGTaGCTATGGGCTCAGCGGCCTGGGGCACCACCCCCT | + |
Preference number: 6 (lower is better) Translates to: SPSQPAASVHRR*LWAQRPGAPPP Trigger: AGGGGGTGGTGCCCCAGGCCGCTGAGCCCATAGCCACCTTCTATGGACTGAGGCAGCAGGCTGAGAAGGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 72 bp | TGGCCGGATGCCCTCATACCGGAGTCTGCGCAAGTCTaGGACGCCCAACTGCTCACTCCTAGAGTAGGCCCA | + |
Preference number: 6 (lower is better) Translates to: WPDALIPESAQV*DAQLLTPRVGP Trigger: TGGGCCTACTCTAGGAGTGAGCAGTTGGGCGTCCCAGACTTGCGCAGACTCCGGTATGAGGGCATCCGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 72 bp | CTCAGTATGGTCAGGCTGGCTGGGGTAACCAGGAGCTaGCCGGATGCCCTCATACCGGAGTCTGCGCAAGTC | + |
Preference number: 6 (lower is better) Translates to: LSMVRLAGVTRS*PDALIPESAQV Trigger: GACTTGCGCAGACTCCGGTATGAGGGCATCCGGCCAGCTCCTGGTTACCCCAGCCAGCCTGACCATACTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 72 bp | CTGAAGCGGGTGCCATTGCCAAGGATTCTGTCAGCCTaGTGCCTGTGGCCTGCTCGATGCTGGCCAGTCTCC | + |
Preference number: 6 (lower is better) Translates to: LKRVPLPRILSA*CLWPARCWPVS Trigger: GGAGACTGGCCAGCATCGAGCAGGCCACAGGCATCAGGCTGACAGAATCCTTGGCAATGGCACCCGCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 72 bp | TCAGCGGCCTGGGGCACCACCCCCTCTGCATACAGGTaGATGTCATCCTGGACACTCTGTGCTGGCCAGAAT | + |
Preference number: 6 (lower is better) Translates to: SAAWGTTPSAYR*MSSWTLCAGQN Trigger: ATTCTGGCCAGCACAGAGTGTCCAGGATGACATCCACCTGTATGCAGAGGGGGTGGTGCCCCAGGCCGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 72 bp | AGGCCTCTGCCAGCCTGTCGCCCAGCGCCTTCACCATaGTGCTGCTGTAGTCATCGCCATCATCCTCATAGG | + |
Preference number: 6 (lower is better) Translates to: RPLPACRPAPSP*CCCSHRHHPHR Trigger: CCTATGAGGATGATGGCGATGACTACAGCAGCATCATGGTGAAGGCGCTGGGCGACAGGCTGGCAGAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 72 bp | CTCTGCATACAGGTGGATGTCATCCTGGACACTCTGTaGTGGCCAGAATCCAACCACACCCCTGGCCTGCAG | + |
Preference number: 6 (lower is better) Translates to: LCIQVDVILDTL*WPESNHTPGLQ Trigger: CTGCAGGCCAGGGGTGTGGTTGGATTCTGGCCAGCACAGAGTGTCCAGGATGACATCCACCTGTATGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 72 bp | ATCCAATGCACAGGGGGTCCGAATGAGACACGCTGGTaGCAAAAGCCTCTCCCGTCTGCCCAGAAAGAGTCC | + |
Preference number: 6 (lower is better) Translates to: IQCTGGPNETRW*QKPLPSAQKES Trigger: GGACTCTTTCTGGGCAGACGGGAGAGGCTTTTGTCACCAGCGTGTCTCATTCGGACCCCCTGTGCATTGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099856.6 ENSMUST00000221290.2 |
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CDS GCA 72 bp | GCCAGCACCACGCCAACTATGTTCTTGCCGATGTCATaGACGTCCCCTTTAACAGTGGCCAGCACAATGGTG | + |
Preference number: 6 (lower is better) Translates to: ASTTPTMFLPMS*TSPLTVASTMV Trigger: CACCATTGTGCTGGCCACTGTTAAAGGGGACGTGCATGACATCGGCAAGAACATAGTTGGCGTGGTGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 72 bp | AAGATGTCGACCCTGCCATCCAGCAGTCCCTTGGCCTaGTCCTGGTATGCGTCAACAAGCTCATCAAATGTG | + |
Preference number: 6 (lower is better) Translates to: KMSTLPSSSPLA*SWYASTSSSNV Trigger: CACATTTGATGAGCTTGTTGACGCATACCAGGAGCAGGCCAAGGGACTGCTGGATGGCAGGGTCGACATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099856.6 ENSMUST00000221290.2 |
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CDS TCA 72 bp | GCTGGATCATGGTCCCCATCCCACCGTCTAGCACCATaGTCCTCTTCCGAAGAATGGCTTCAATCTCATCCT | + |
Preference number: 6 (lower is better) Translates to: AGSWSPSHRLAP*SSSEEWLQSHP Trigger: AGGATGAGATTGAAGCCATTCTTCGGAAGAGGATCATGGTGCTAGACGGTGGGATGGGGACCATGATCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099856.6 ENSMUST00000221290.2 |
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CDS GCA 72 bp | CAGAGTTATCTCCTCAGCGGCTTTTCTGGCCACATCTaGAGAGCACTTGTTCATCCGGTAGGCCAAGTGTTC | + |
Preference number: 6 (lower is better) Translates to: QSYLLSGFSGHI*RALVHPVGQVF Trigger: GAACACTTGGCCTACCGGATGAACAAGTGCTCTGCAGATGTGGCCAGAAAAGCCGCTGAGGAGATAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 72 bp | TTATTAGTCGGACCCAGAGCTCCAGCCACAAACCTCTaGACTCCTGTCTGCAGAGTTATCTCCTCAGCGGCT | + |
Preference number: 6 (lower is better) Translates to: LLVGPRAPATNL*TPVCRVISSAA Trigger: AGCCGCTGAGGAGATAACTCTGCAGACAGGAGTCAAGAGGTTTGTGGCTGGAGCTCTGGGTCCGACTAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CCA 72 bp | CAGAATGGGACCAAGCCATTTCTCCACCTCGGCCACTaGCATGTTCTTCCTCAAAGCATAATCCTCAGTCTG | + |
Preference number: 6 (lower is better) Translates to: QNGTKPFLHLGH*HVLPQSIILSL Trigger: CAGACTGAGGATTATGCTTTGAGGAAGAACATGCCAGTGGCCGAGGTGGAGAAATGGCTTGGTCCCATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 90 bp | GATGTCATGCACGTCCCCTTTAACAGTGGCCAGCACAATGGTGCCTaGGTAAGGGTCCTCTTCTTCAACCGAACCATTAATCAATCTGGC | + |
Preference number: 6 (lower is better) Translates to: DVMHVPFNSGQHNGA*VRVLFFNRTINQSG Trigger: GCCAGATTGATTAATGGTTCGGTTGAAGAAGAGGACCCTTACCAAGGCACCATTGTGCTGGCCACTGTTAAAGGGGACGTGCATGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 72 bp | TCATCTGTCTGGATGACTTTCTTCCCTCCTGTGCCATaGGTCTGGGCATATCGCAAGAGTTTCTCAGTAGCC | + |
Preference number: 6 (lower is better) Translates to: SSVWMTFFPPVP*VWAYRKSFSVA Trigger: GGCTACTGAGAAACTCTTGCGATATGCCCAGACTCATGGCACAGGAGGGAAGAAAGTCATCCAGACAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 72 bp | AAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGATaGGGTTCAGAGAGCCAATCAATGTGGAAACCGTGT | + |
Preference number: 6 (lower is better) Translates to: KTWVPINVGFTG*GSESQSMWKPC Trigger: ACACGGTTTCCACATTGATTGGCTCTCTGAACCTCATCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 72 bp | CACGTCCCCTTTAACAGTGGCCAGCACAATGGTGCCTaGGTAAGGGTCCTCTTCTTCAACCGAACCATTAAT | + |
Preference number: 6 (lower is better) Translates to: HVPFNSGQHNGA*VRVLFFNRTIN Trigger: ATTAATGGTTCGGTTGAAGAAGAGGACCCTTACCAAGGCACCATTGTGCTGGCCACTGTTAAAGGGGACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 90 bp | ATAACTCTGAAATTGTTACAGGCCAGCACCACGCCAACTATGTTCTaGCCGATGTCATGCACGTCCCCTTTAACAGTGGCCAGCACAATG | + |
Preference number: 6 (lower is better) Translates to: ITLKLLQASTTPTMF*PMSCTSPLTVASTM Trigger: CATTGTGCTGGCCACTGTTAAAGGGGACGTGCATGACATCGGCAAGAACATAGTTGGCGTGGTGCTGGCCTGTAACAATTTCAGAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 90 bp | ACTGCTTTGTCATTAAATATCTTGGGAAATCCTCGGTTCGGGTACTaGCCCCGGAGCTGCCAGACGTCAAAGAAAGGCTTCCAGTCAATG | + |
Preference number: 6 (lower is better) Translates to: TALSLNILGNPRFGY*PRSCQTSKKGFQSM Trigger: CATTGACTGGAAGCCTTTCTTTGACGTCTGGCAGCTCCGGGGCAAGTACCCGAACCGAGGATTTCCCAAGATATTTAATGACAAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 90 bp | TATACCTTTCTGGCTTCTTCACCTACTGCTTTGTCATTAAATATCTaGGGAAATCCTCGGTTCGGGTACTTGCCCCGGAGCTGCCAGACG | + |
Preference number: 6 (lower is better) Translates to: YTFLASSPTALSLNI*GNPRFGYLPRSCQT Trigger: CGTCTGGCAGCTCCGGGGCAAGTACCCGAACCGAGGATTTCCCAAGATATTTAATGACAAAGCAGTAGGTGAAGAAGCCAGAAAGGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 90 bp | CTGTGCTGGCCAGAATCCAACCACACCCCTGGCCTGCAGTTTCTTTaGACTAATCAGTATGTTCAGCATATTCTGAGCATCATTGTATAC | + |
Preference number: 6 (lower is better) Translates to: LCWPESNHTPGLQFL*TNQYVQHILSIIVY Trigger: GTATACAATGATGCTCAGAATATGCTGAACATACTGATTAGTCAAAAGAAACTGCAGGCCAGGGGTGTGGTTGGATTCTGGCCAGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 72 bp | CCAGAATCCAACCACACCCCTGGCCTGCAGTTTCTTTaGACTAATCAGTATGTTCAGCATATTCTGAGCATC | + |
Preference number: 6 (lower is better) Translates to: PESNHTPGLQFL*TNQYVQHILSI Trigger: GATGCTCAGAATATGCTGAACATACTGATTAGTCAAAAGAAACTGCAGGCCAGGGGTGTGGTTGGATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 72 bp | TGGCTTCTTCAGTATCTTCAACAATGTGCTTTTCAATaGCCTTCACAAGAGCATACTCCAGGCGCTCTTCAA | + |
Preference number: 6 (lower is better) Translates to: WLLQYLQQCAFQ*PSQEHTPGALQ Trigger: TTGAAGAGCGCCTGGAGTATGCTCTTGTGAAGGGCATTGAAAAGCACATTGTTGAAGATACTGAAGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS TCA 72 bp | AAAAATCATCTCATCCAAGGATGGAGTGATGAGTCCTaGCAAGCCAATTATATCTGCTTTGTGGTCCAGAGC | + |
Preference number: 6 (lower is better) Translates to: KNHLIQGWSDES*QANYICFVVQS Trigger: GCTCTGGACCACAAAGCAGATATAATTGGCTTGTCAGGACTCATCACTCCATCCTTGGATGAGATGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS CAA 72 bp | TCATTGTATACCTTTCTGGCTTCTTCACCTACTGCTTaGTCATTAAATATCTTGGGAAATCCTCGGTTCGGG | + |
Preference number: 6 (lower is better) Translates to: SLYTFLASSPTA*SLNILGNPRFG Trigger: CCCGAACCGAGGATTTCCCAAGATATTTAATGACAAAGCAGTAGGTGAAGAAGCCAGAAAGGTATACAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |
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CDS GCA 72 bp | ACTAGTACTGCTGAAAGTGTTTGTTTCGATGATATCTaGTCCAGCCAGCAAGTATTCCTTATGAATCTGGTA | + |
Preference number: 6 (lower is better) Translates to: TSTAESVCFDDI*SSQQVFLMNLV Trigger: TACCAGATTCATAAGGAATACTTGCTGGCTGGAGCAGATATCATCGAAACAAACACTTTCAGCAGTACTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099856.6 ENSMUST00000221290.2 |
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CDS GCA 72 bp | AGCATCATTGTATACCTTTCTGGCTTCTTCACCTACTaGTTTGTCATTAAATATCTTGGGAAATCCTCGGTT | + |
Preference number: 6 (lower is better) Translates to: SIIVYLSGFFTY*FVIKYLGKSSV Trigger: AACCGAGGATTTCCCAAGATATTTAATGACAAAGCAGTAGGTGAAGAAGCCAGAAAGGTATACAATGATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099856.6 |