Pregenerated sensors for MTPAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024234Ensembl transcript IDs: ENSMUST00000025077.7, ENSMUST00000234186.2, ENSMUST00000234422.2, ENSMUST00000234924.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGATCACACTGGAATCCAGAGCCCTGATGGGAGAATCTCACCAGTaGACATCGAGCATTGAGTATCTTCTGAACACCCACACAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: QITLESRALMGESHQ*TSSIEYLLNTHTAR Trigger: CCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGCTCGATGTCCACTGGTGAGATTCTCCCATCAGGGCTCTGGATTCCAGTGTGATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR CCA 90 bp | AGAGAGCAGGTGAGATGGCGGAGCCTGATATTCTCTTCTGTGAGCTaGAAGGCCTTCAGGAGAGTGTTCAGCTGCTCCTCTATGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: REQVRWRSLIFSSVS*KAFRRVFSCSSMLS Trigger: AGAAAGCATAGAGGAGCAGCTGAACACTCTCCTGAAGGCCTTCCAGCTCACAGAAGAGAATATCAGGCTCCGCCATCTCACCTGCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR CCA 90 bp | GGAAAATATGCAGCAGCAATGTCCTCAATCAGAGAGCAGGTGAGATaGCGGAGCCTGATATTCTCTTCTGTGAGCTGGAAGGCCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GKYAAAMSSIREQVR*RSLIFSSVSWKAFR Trigger: CCTGAAGGCCTTCCAGCTCACAGAAGAGAATATCAGGCTCCGCCATCTCACCTGCTCTCTGATTGAGGACATTGCTGCTGCATATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR TCA 90 bp | ATCCAGAGCCCTGATGGGAGAATCTCACCAGTGGACATCGAGCATTaGGTATCTTCTGAACACCCACACAGCCAGGGCCAAAATTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: IQSPDGRISPVDIEH*VSSEHPHSQGQNCQ Trigger: TTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGCTCGATGTCCACTGGTGAGATTCTCCCATCAGGGCTCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR TCA 90 bp | ATCCTAATTTGCCAAATGTGTTCACTGAGGAGCCAAAGGGCCGGATaGCACAGCTGGGAAAATATGCAGCAGCAATGTCCTCAATCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ILICQMCSLRSQRAG*HSWENMQQQCPQSE Trigger: CTCTGATTGAGGACATTGCTGCTGCATATTTTCCCAGCTGTGTCATCCGGCCCTTTGGCTCCTCAGTGAACACATTTGGCAAATTAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR TCA 90 bp | GCAATACTATTGTTAGCAGTCAGATCACACTGGAATCCAGAGCCCTaGTGGGAGAATCTCACCAGTGGACATCGAGCATTGAGTATCTTC | + |
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Preference number: 1 (lower is better) Translates to: AILLLAVRSHWNPEP*WENLTSGHRALSIF Trigger: GAAGATACTCAATGCTCGATGTCCACTGGTGAGATTCTCCCATCAGGGCTCTGGATTCCAGTGTGATCTGACTGCTAACAATAGTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR TCA 90 bp | GAATACTGCTTGTTAATGAATGTGCCCGAGCCCAGCATCGCACACTaGACACCAAAGCTCTTACTCTCGAATCCAGGGAGCCATATATAT | + |
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Preference number: 1 (lower is better) Translates to: EYCLLMNVPEPSIAH*TPKLLLSNPGSHIY Trigger: ATATATATGGCTCCCTGGATTCGAGAGTAAGAGCTTTGGTGTTCAGTGTGCGATGCTGGGCTCGGGCACATTCATTAACAAGCAGTATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR CCA 90 bp | GGAGGTGACTGGTTGGTTGTCTGTACAAATGGCTGTCCAGATACTTaGCTAGACGGATTCTTCAGCCTTAAGTTCAAGAACCGTGACTTA | + |
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Preference number: 1 (lower is better) Translates to: GGDWLVVCTNGCPDT*LDGFFSLKFKNRDL Trigger: TAAGTCACGGTTCTTGAACTTAAGGCTGAAGAATCCGTCTAGCCAAGTATCTGGACAGCCATTTGTACAGACAACCAACCAGTCACCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR CCA 90 bp | GACTTTAGGGAATCTAGAGTTGGAAGAATGGGAGGTGATCTTCTCTaGAGGAAAAAGATGACCATCACTGTTAAGGAGAAGTTTGTAATC | + |
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Preference number: 1 (lower is better) Translates to: DFRESRVGRMGGDLL*RKKMTITVKEKFVI Trigger: GATTACAAACTTCTCCTTAACAGTGATGGTCATCTTTTTCCTCCAGAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR CCA 90 bp | TACAATTGTTCCCCTCTAGAATACATCTATCTTCAGCATCTGCTATaGACTTTAGGGAATCTAGAGTTGGAAGAATGGGAGGTGATCTTC | + |
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Preference number: 1 (lower is better) Translates to: YNCSPLEYIYLQHLL*TLGNLELEEWEVIF Trigger: GAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAGATAGATGTATTCTAGAGGGGAACAATTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCGGGAGAGAGATGTGTGGCCTGACCCCGGTGGCAGCAGGAGGGCAGCCAGGAGGTGATCTTCTCTaGAGGAAAAAGATGACCATC | + |
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Preference number: 2 (lower is better) Translates to: SSGREMCGLTPVAAGGQPGGDLL*RKKMTI Trigger: GATGGTCATCTTTTTCCTCCAGAGAAGATCACCTCC...TGGCTGCCCTCCTGCTGCCACCGGGGTCAGGCCACACATCTCTCTCCCGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGTGGACATCGAGCATTGAGTATCTTCTGAACACCCACACAGCCAGGGCCGCCAAATGTGTTCACTaGGGAGCCAAAGGGCCGGAT | + |
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Preference number: 2 (lower is better) Translates to: HQWTSSIEYLLNTHTARAAKCVH*GAKGPD Trigger: ATCCGGCCCTTTGGCTCCTCAGTGAACACATTTGGC...GGCCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGCTCGATGTCCACTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCGGGAGAGAGATGTGTGGCCTGACCCCGGTGGCAGCAGGAGGGCAGCCAGTGTTTCCAGAAGGTTaGATTTTATTCACATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SSGREMCGLTPVAAGGQPVFPEG*ILFTSW Trigger: CCAGGATGTGAATAAAATTCAACCTTCTGGAAACAC...TGGCTGCCCTCCTGCTGCCACCGGGGTCAGGCCACACATCTCTCTCCCGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | CGGTGGCAGCAGGAGGGCAGCCAGTCCCCAGGGTTGCCTACTCGAAGAAAAAGGATTTCCTCTCCTGTGTaGAAGTTGGGATTATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RWQQEGSQSPGLPTRRKRISSPV*KLGLCV Trigger: CACACATAATCCCAACTTTCACACAGGAGAGGAAAT...CCTTTTTCTTCGAGTAGGCAACCCTGGGGACTGGCTGCCCTCCTGCTGCCACCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGTGGGGGAAGAAAAGTaGGAGAGGGTATGCAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VALTREARAVHFLSCVKVVGEEK*ERVCKG Trigger: CCCCTTGCATACCCTCTCTCACTTTTCTTCCCCCAC...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCGTGGGGGAAGAAAAGTaGGAGAGGGTATGCAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KPNLSNWQRGTSLEVALTVGEEK*ERVCKG Trigger: CCCCTTGCATACCCTCTCTCACTTTTCTTCCCCCAC...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGATTCTGGATGTATAGAGGAGAGGAATCAGGCTTGTTTTGTTCCCTTCCCGAGAGATGTGTGGCCTaGCCCCGGTGGCAGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: KGFWMYRGEESGLFCSLPERCVA*PRWQQE Trigger: CTCCTGCTGCCACCGGGGTCAGGCCACACATCTCTC...GGGAAGGGAACAAAACAAGCCTGATTCCTCTCCTCTATACATCCAGAATCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGCATTGAGTATCTTCTaGACACCCACACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VALTREARAVHFLSCVKVALSIF*TPTQPG Trigger: CCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGC...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCCAAAATTGTCAAGGCACTCTCCTATTACAGATAGGATCTTCTGGGTTGGCCAAATGTGTTCACTaGGGAGCCAAAGGGCCGGAT | + |
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Preference number: 2 (lower is better) Translates to: QGQNCQGTLLLQIGSSGLAKCVH*GAKGPD Trigger: ATCCGGCCCTTTGGCTCCTCAGTGAACACATTTGGC...CAACCCAGAAGATCCTATCTGTAATAGGAGAGTGCCTTGACAATTTTGGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTACTCTGGGGACCTTTTaGGGAAGATCTTACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ETQFGKSNPTCLTGNGELTLGTF*GRSYRE Trigger: CTCCCTGTAAGATCTTCCCCAAAAGGTCCCCAGAGT...AAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACACCCACACAGCCAGGGCCAAAATTGTCAAGGCACTCTCCTATTACAGAGAGAGCAGGTGAGATaGCGGAGCCTGATATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SEHPHSQGQNCQGTLLLQREQVR*RSLIFS Trigger: AGAGAATATCAGGCTCCGCCATCTCACCTGCTCTCT...CTGTAATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTACTCTGGGGACCTTTTaGGGAAGATCTTACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: EIKPNLSNWQRGTSLEVATLGTF*GRSYRE Trigger: CTCCCTGTAAGATCTTCCCCAAAAGGTCCCCAGAGT...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTGGCTGTCCAGATACTTaGCTAGACGGATTCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAGCPDT*LDGFFS Trigger: GCTGAAGAATCCGTCTAGCCAAGTATCTGGACAGCC...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAACCCAACTGAGGGCTAGTGGGGGAAGAAAAGTGAGAGAGGGTATGCAATCAGCTGCTCCTCTATaGTTTCTGCATAACTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SRTQLRASGGRKVREGMQSAAPL*FLHNSV Trigger: TACTGAGTTATGCAGAAAGCATAGAGGAGCAGCTGA...TTGCATACCCTCTCTCACTTTTCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR GCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCACAGCTGGGAAAATATaGAGCAGCAATGTCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: KPNLSNWQRGTSLEVALTTAGKI*SSNVLN Trigger: ATTGAGGACATTGCTGCTGCATATTTTCCCAGCTGT...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGTGGACATCGAGCATTGAGTATCTTCTGAACACCCACACAGCCAGGGCCACAGATAGGATCTTCTaGGTTGCAATTCTTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HQWTSSIEYLLNTHTARATDRIF*VAILSE Trigger: TTCAGAAAGAATTGCAACCCAGAAGATCCTATCTGT...GGCCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGCTCGATGTCCACTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCACTCTCCTATTACAGATAGGATCTTCTGGGTTGCAATTCTTTCTGAAGGCATTGAGTATCTTCTaGACACCCACACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QGTLLLQIGSSGLQFFLKALSIF*TPTQPG Trigger: CCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGC...CTTCAGAAAGAATTGCAACCCAGAAGATCCTATCTGTAATAGGAGAGTGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAACACCCACACAGCCAGGGCCAAAATTGTCAAGGCACTCTCCTATTACAGAAGCACCAGGAATACTaGTTGTTAATGAATGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SEHPHSQGQNCQGTLLLQKHQEY*LLMNVP Trigger: GGGCACATTCATTAACAAGCAGTATTCCTGGTGCTT...CTGTAATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTATTTCCTCTCCTGTGTaGAAGTTGGGATTATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAISSPV*KLGLCV Trigger: CACACATAATCCCAACTTTCACACAGGAGAGGAAAT...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTGAACACAGAATACACTaGCTAAAGTGTTTGCGCTTT | + |
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Preference number: 2 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAEHRIH*LKCLRF Trigger: AAAGCGCAAACACTTTAGTCAGTGTATTCTGTGTTC...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACACCCACACAGCCAGGGCCAAAATTGTCAAGGCACTCTCCTATTACAGACAGATAGGATCTTCTaGGTTGCAATTCTTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: SEHPHSQGQNCQGTLLLQTDRIF*VAILSE Trigger: TTCAGAAAGAATTGCAACCCAGAAGATCCTATCTGT...CTGTAATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATTCTTATCTTCCTGTTCCAAAATCCAGGCACTGTCTCTTGCCAGTTCCACTTTTGTAGCTGGCTCTaGCTGACATTTTTGCTTATG | + |
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Preference number: 2 (lower is better) Translates to: LILIFLFQNPGTVSCQFHFCSWL*LTFLLM Trigger: CATAAGCAAAAATGTCAGTCAGAGCCAGCTACAAAA...GTGGAACTGGCAAGAGACAGTGCCTGGATTTTGGAACAGGAAGATAAGAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR GCA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTAGAATTGCAGCCTCTGTaGTCTGGGTTGGAGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: NQQRQSIESLMGYKPNALELQPL*SGLEYV Trigger: CACATACTCCAACCCAGAGCACAGAGGCTGCAATTC...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTTCTACATATCTGATTaGAACACAGAATACACTGAC | + |
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Preference number: 2 (lower is better) Translates to: RDPVWEIKPNLSNWQRGTFYISD*NTEYTD Trigger: GTCAGTGTATTCTGTGTTCCAATCAGATATGTAGAA...AGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGTTGCCTACTCGAAGAAAAAGGCTGATTCTTATCTTCCTGTTCCAAAATTCCCTGTATTCTTGTaGACATCAAGTTTTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PRVAYSKKKADSYLPVPKFPVFL*TSSFPV Trigger: AACTGGAAAACTTGATGTTCACAAGAATACAGGGAA...TTTTGGAACAGGAAGATAAGAATCAGCCTTTTTCTTCGAGTAGGCAACCCTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAGGGAATCTAGAGTTGGAAGAATGGGAGGTGATCTTCTCTGGAGGAAAAAGATTCAAAGAGCTTTTTaGTTGAAGGAGGTGACTGGT | + |
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Preference number: 2 (lower is better) Translates to: FRESRVGRMGGDLLWRKKIQRAF*LKEVTG Trigger: ACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAAT...CTTTTTCCTCCAGAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTACAATTGTTCCCCTCTAGAATACATCTATCTTCAGCATCTGCTATGGACGGAGGTGATCTTCTCTaGAGGAAAAAGATGACCATC | + |
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Preference number: 2 (lower is better) Translates to: NVQLFPSRIHLSSASAMDGGDLL*RKKMTI Trigger: GATGGTCATCTTTTTCCTCCAGAGAAGATCACCTCC...GTCCATAGCAGATGCTGAAGATAGATGTATTCTAGAGGGGAACAATTGTACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGAATCAGGCTTGTTTTGTTCCCTTCCCTGTCGAATGTTTATGGAATTTTGGTTGCAATTCTTTCTaGAGGAACGTTTTTCACTTG | + |
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Preference number: 2 (lower is better) Translates to: ERNQACFVPFPVECLWNFGCNSF*RNVFHL Trigger: CAAGTGAAAAACGTTCCTTCAGAAAGAATTGCAACC...AAAATTCCATAAACATTCGACAGGGAAGGGAACAAAACAAGCCTGATTCCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR GCA 90 bp | GGAATCAGGCTTGTTTTGTTCCCTTCCCTGTCGAATGTTTATGGAATTTTTATTCCAGGCACTGTCTCTTaGCAGTTCCACAAATTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GIRLVLFPSLSNVYGIFIPGTVS*QFHKFL Trigger: CAAAAATTTGTGGAACTGGCAAGAGACAGTGCCTGG...AATAAAAATTCCATAAACATTCGACAGGGAAGGGAACAAAACAAGCCTGATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | GGAATCAGGCTTGTTTTGTTCCCTTCCCTGTCGAATGTTTATGGAATTTTTATTGGTTGTCTGTACAAATaGCTGTCCAGATACTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GIRLVLFPSLSNVYGIFIGCLYK*LSRYLA Trigger: AGCCAAGTATCTGGACAGCCATTTGTACAGACAACC...AATAAAAATTCCATAAACATTCGACAGGGAAGGGAACAAAACAAGCCTGATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATGGATGCTAACAAGCCTTTGACTTTTTCACTCATCGGCTTTTTCTTCTTCCTCGAAGAAAAAGGCTaGTTCTTATCTTCCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: FMDANKPLTFSLIGFFFFLEEKG*FLSSCS Trigger: GGAACAGGAAGATAAGAATCAGCCTTTTTCTTCGAG...GAAGAAGAAAAAGCCGATGAGTGAAAAAGTCAAAGGCTTGTTAGCATCCATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATGGATGCTAACAAGCCTTTGACTTTTTCACTCATCGGCTTTTTCTTCTTCCTTCAGCATCTGCTATaGACTTTAGGGAATCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: FMDANKPLTFSLIGFFFFLQHLL*TLGNLE Trigger: CTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAG...GAAGAAGAAAAAGCCGATGAGTGAAAAAGTCAAAGGCTTGTTAGCATCCATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATGGATGCTAACAAGCCTTTGACTTTTTCACTCATCGGCTTTTTCTTCTTCCAAAAGGCTGCATCATaGCTGTGTACTAATTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: FMDANKPLTFSLIGFFFFQKAAS*LCTNCS Trigger: AGAACAATTAGTACACAGGCATGATGCAGCCTTTTG...GAAGAAGAAAAAGCCGATGAGTGAAAAAGTCAAAGGCTTGTTAGCATCCATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCATATATATAAAGGAGTTCGGAACTTTTCAAAGCAATACTATTGTTAGCGGTTGCAATTCTTTCTaGAGGAACGTTTTTCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: GAIYIKEFGTFQSNTIVSGCNSF*RNVFHL Trigger: CAAGTGAAAAACGTTCCTTCAGAAAGAATTGCAACC...GCTAACAATAGTATTGCTTTGAAAAGTTCCGAACTCCTTTATATATATGGCTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAGGGAGCCATATATATAAAGGAGTTCGGAACTTTTCAAAGCAATACTATTTTCCCTGTATTCTTGTaGACATCAAGTTTTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: IQGAIYIKEFGTFQSNTIFPVFL*TSSFPV Trigger: AACTGGAAAACTTGATGTTCACAAGAATACAGGGAA...AATAGTATTGCTTTGAAAAGTTCCGAACTCCTTTATATATATGGCTCCCTGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | ATCGGCTTTTTCTTCTTCTTCCGGGAGAGAGATGTGTaGCCTGACCCCGGTGGCAGCAGGAGGGCAGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: IGFFFFFRERDV*PDPGGSRRAAS Trigger: ACTGGCTGCCCTCCTGCTGCCACCGGGGTCAGGCCACACATCTCTCTCCCGGAAGAAGAAGAAAAAGCCGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR TCA 72 bp | GGGAAGAGGAGGAGTAGCAGAACAGTCACTCCTACATaGAGCAGAACCCAACTGAGGGCTAGTGGGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKRRSSRTVTPT*SRTQLRASGGR Trigger: TCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCTTCATGTAGGAGTGACTGTTCTGCTACTCCTCCTCTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
||
| 3UTR TCA 72 bp | CCTGATGGGAGAATCTCACCAGTGGACATCGAGCATTaGGTATCTTCTGAACACCCACACAGCCAGGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PDGRISPVDIEH*VSSEHPHSQGQ Trigger: TTGGCCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGCTCGATGTCCACTGGTGAGATTCTCCCATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | GCAGCAGCAATGTCCTCAATCAGAGAGCAGGTGAGATaGCGGAGCCTGATATTCTCTTCTGTGAGCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AAAMSSIREQVR*RSLIFSSVSWK Trigger: CTTCCAGCTCACAGAAGAGAATATCAGGCTCCGCCATCTCACCTGCTCTCTGATTGAGGACATTGCTGCTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTAACTCTGGGGACCTTTaGGGGAAGATCTTACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VALTREARAVHFLSCVKVNSGDL*GKILQG Trigger: TCCCTGTAAGATCTTCCCCAAAAGGTCCCCAGAGTT...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
||
| 3UTR CCA 72 bp | CTGGAATCCAGAGCCCTGATGGGAGAATCTCACCAGTaGACATCGAGCATTGAGTATCTTCTGAACACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LESRALMGESHQ*TSSIEYLLNTH Trigger: GTGGGTGTTCAGAAGATACTCAATGCTCGATGTCCACTGGTGAGATTCTCCCATCAGGGCTCTGGATTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTAACTCTGGGGACCTTTaGGGGAAGATCTTACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETQFGKSNPTCLTGNGELNSGDL*GKILQG Trigger: TCCCTGTAAGATCTTCCCCAAAAGGTCCCCAGAGTT...AAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 ENSMUST00000234924.2 |
||
| 3UTR TCA 72 bp | TTGTTAGCAGTCAGATCACACTGGAATCCAGAGCCCTaGTGGGAGAATCTCACCAGTGGACATCGAGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LLAVRSHWNPEP*WENLTSGHRAL Trigger: CAATGCTCGATGTCCACTGGTGAGATTCTCCCATCAGGGCTCTGGATTCCAGTGTGATCTGACTGCTAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAACACCCACACAGCCAGGGCCAAAATTGTCAAGGCACTCTCCTATTACAGCACCAGGAATACTGCTaGTTAATGAATGTGCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SEHPHSQGQNCQGTLLLQHQEYC*LMNVPE Trigger: CTCGGGCACATTCATTAACAAGCAGTATTCCTGGTG...CTGTAATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTGAGGTGACTGGTTGGTaGTCTGTACAAATGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAEVTGW*SVQMAV Trigger: GACAGCCATTTGTACAGACAACCAACCAGTCACCTC...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR TCA 72 bp | AATCTCACCAGTGGACATCGAGCATTGAGTATCTTCTaGACACCCACACAGCCAGGGCCAAAATTGTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NLTSGHRALSIF*TPTQPGPKLSR Trigger: CCTTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGCTCGATGTCCACTGGTGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCAATTCAAAGAGCTTTTaGCTTGAAGGAGGTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: KPNLSNWQRGTSLEVALTNSKSF*LEGGDW Trigger: CCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAATT...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGATTCTGGATGTATAGAGGAGAGGAATCAGGCTTGTTTTGTTCCCTTCCCCAGCCAGGGCCAAAATaGTCAAGGCACTCTCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: KGFWMYRGEESGLFCSLPQPGPK*SRHSPI Trigger: AATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTG...GGGAAGGGAACAAAACAAGCCTGATTCCTCTCCTCTATACATCCAGAATCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGATTCTGGATGTATAGAGGAGAGGAATCAGGCTTGTTTTGTTCCCTTCCCTTAGGGAATCTAGAGTaGGAAGAATGGGAGGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: KGFWMYRGEESGLFCSLPLGNLE*EEWEVI Trigger: GATCACCTCCCATTCTTCCAACTCTAGATTCCCTAA...GGGAAGGGAACAAAACAAGCCTGATTCCTCTCCTCTATACATCCAGAATCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | TGGTTGGTTGTCTGTACAAATGGCTGTCCAGATACTTaGCTAGACGGATTCTTCAGCCTTAAGTTCAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WLVVCTNGCPDT*LDGFFSLKFKN Trigger: GTTCTTGAACTTAAGGCTGAAGAATCCGTCTAGCCAAGTATCTGGACAGCCATTTGTACAGACAACCAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | ATTCAAAGAGCTTTTTGCTTGAAGGAGGTGACTGGTTaGTTGTCTGTACAAATGGCTGTCCAGATACTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IQRAFCLKEVTG*LSVQMAVQILG Trigger: GCCAAGTATCTGGACAGCCATTTGTACAGACAACCAACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTTTCAAAGCAATACTATaGTTAGCAGTCAGATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAFKAIL*LAVRSH Trigger: GTGTGATCTGACTGCTAACAATAGTATTGCTTTGAA...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | GAATCTAGAGTTGGAAGAATGGGAGGTGATCTTCTCTaGAGGAAAAAGATGACCATCACTGTTAAGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESRVGRMGGDLL*RKKMTITVKEK Trigger: CTTCTCCTTAACAGTGATGGTCATCTTTTTCCTCCAGAGAAGATCACCTCCCATTCTTCCAACTCTAGATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | TCCCCTCTAGAATACATCTATCTTCAGCATCTGCTATaGACTTTAGGGAATCTAGAGTTGGAAGAATGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLEYIYLQHLL*TLGNLELEEWE Trigger: CTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAGATAGATGTATTCTAGAGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTCTTATCTTCCTGTTCCAAAATCCAGGCACTGTCTCTTGCCAGTTCCACTGTGTTTCCAGAAGGTaGAATTTTATTCACATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LILIFLFQNPGTVSCQFHCVSRR*NFIHIL Trigger: CAGGATGTGAATAAAATTCAACCTTCTGGAAACACA...GTGGAACTGGCAAGAGACAGTGCCTGGATTTTGGAACAGGAAGATAAGAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATACAAAGAGCTTTTTGCTaGAAGGAGGTGACTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: STKTKHRKPDGIQAQCFIQRAFC*KEVTGW Trigger: CCAACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTG...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | AGTAATTCAAAGAGCTTTTTGCTTGAAGGAGGTGACTaGTTGGTTGTCTGTACAAATGGCTGTCCAGATACT | + |
|
Preference number: 3 (lower is better) Translates to: SNSKSFLLEGGD*LVVCTNGCPDT Trigger: AGTATCTGGACAGCCATTTGTACAGACAACCAACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAATCAGGCTTGTTTTGTTCCCTTCCCTGTCGAATGTTTATGGAATTTTTATTCACCAGGAATACTGCTaGTTAATGAATGTGCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: GIRLVLFPSLSNVYGIFIHQEYC*LMNVPE Trigger: CTCGGGCACATTCATTAACAAGCAGTATTCCTGGTG...AATAAAAATTCCATAAACATTCGACAGGGAAGGGAACAAAACAAGCCTGATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGGGAATCTAGAGTTGGAAGAATGGGAGGTGATCTTCTCTGGAGGAAAAAGTTCAAAGCAATACTATaGTTAGCAGTCAGATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: FRESRVGRMGGDLLWRKKFKAIL*LAVRSH Trigger: GTGTGATCTGACTGCTAACAATAGTATTGCTTTGAA...CTTTTTCCTCCAGAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGGATGCTAACAAGCCTTTGACTTTTTCACTCATCGGCTTTTTCTTCTTCTTAGGGAATCTAGAGTaGGAAGAATGGGAGGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: FMDANKPLTFSLIGFFFFLGNLE*EEWEVI Trigger: GATCACCTCCCATTCTTCCAACTCTAGATTCCCTAA...GAAGAAGAAAAAGCCGATGAGTGAAAAAGTCAAAGGCTTGTTAGCATCCATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR CCA 72 bp | TTGTCAAGGCACTCTCCTATTACAGATAGGATCTTCTaGGTTGCAATTCTTTCTGAAGGAACGTTTTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LSRHSPITDRIF*VAILSEGTFFT Trigger: AGTGAAAAACGTTCCTTCAGAAAGAATTGCAACCCAGAAGATCCTATCTGTAATAGGAGAGTGCCTTGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTAAAATCACATCCTAATTaGCCAAATGTGTTCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NQQRQSIESLMGYKPNALKSHPN*PNVFTE Trigger: CTCAGTGAACACATTTGGCAAATTAGGATGTGATTT...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGGGAGCCATATATATAAAGGAGTTCGGAACTTTTCAAAGCAATACTATTAAATCACATCCTAATTaGCCAAATGTGTTCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IQGAIYIKEFGTFQSNTIKSHPN*PNVFTE Trigger: CTCAGTGAACACATTTGGCAAATTAGGATGTGATTT...AATAGTATTGCTTTGAAAAGTTCCGAACTCCTTTATATATATGGCTCCCTGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGAGAGATGTGTGGCCTaGCCCCGGTGGCAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VALTREARAVHFLSCVKVERCVA*PRWQQE Trigger: CTCCTGCTGCCACCGGGGTCAGGCCACACATCTCTC...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTCGGGAGAGAGATGTGTaGCCTGACCCCGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VALTREARAVHFLSCVKVRERDV*PDPGGS Trigger: GCTGCCACCGGGGTCAGGCCACACATCTCTCTCCCG...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR GCA 90 bp | CGAGCCCAGCATCGCACACTGAACACCAAAGCTCTTACTCTCGAATCCAGGGAGGGGTCTTGTCTTCAATaGCTGTTTCCGCAACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RAQHRTLNTKALTLESREGSCLQ*LFPQPP Trigger: CGGTGGTTGCGGAAACAGGCATTGAAGACAAGACCC...CTCCCTGGATTCGAGAGTAAGAGCTTTGGTGTTCAGTGTGCGATGCTGGGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACCCAACTGAGGGCTAGTGGGGGAAGAAAAGTGAGAGAGGGTATGCAACGCCGCAATAGTCCCTaGACAACTGAGGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTQLRASGGRKVREGMQRRNSP*TTEEPG Trigger: TCCAGGCTCCTCAGTTGTCCAGGGACTATTGCGGCG...TTGCATACCCTCTCTCACTTTTCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACCCAACTGAGGGCTAGTGGGGGAAGAAAAGTGAGAGAGGGTATGCAAGCCAAATGTGTTCACTaGGGAGCCAAAGGGCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTQLRASGGRKVREGMQAKCVH*GAKGPD Trigger: ATCCGGCCCTTTGGCTCCTCAGTGAACACATTTGGC...TTGCATACCCTCTCTCACTTTTCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCATCGCACACTGAACACCAAAGCTCTTACTCTCGAATCCAGGGAGCCGAATTGCAGCCTCTGTaGTCTGGGTTGGAGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPASHTEHQSSYSRIQGAELQPL*SGLEYV Trigger: CACATACTCCAACCCAGAGCACAGAGGCTGCAATTC...GGCTCCCTGGATTCGAGAGTAAGAGCTTTGGTGTTCAGTGTGCGATGCTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
||
| CDS-3UTR TCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCGCATTGAGTATCTTCTaGACACCCACACAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPNLSNWQRGTSLEVALTALSIF*TPTQPG Trigger: CCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGC...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCGGGTCTTGTCTTCAATaGCTGTTTCCGCAACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KPNLSNWQRGTSLEVALTGSCLQ*LFPQPP Trigger: CGGTGGTTGCGGAAACAGGCATTGAAGACAAGACCC...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCAGCAGGAGGGCAGCCAGTCCCCAGGGTTGCCTACTCGAAGAAAAAGGTTGACTGGTCCATGCTaGGATAAATACTTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RWQQEGSQSPGLPTRRKRLTGPC*DKYLRN Trigger: ATTTCTCAAGTATTTATCCCAGCATGGACCAGTCAA...CCTTTTTCTTCGAGTAGGCAACCCTGGGGACTGGCTGCCCTCCTGCTGCCACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGAATTGCAGCCTCTGTaGTCTGGGTTGGAGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VALTREARAVHFLSCVKVELQPL*SGLEYV Trigger: CACATACTCCAACCCAGAGCACAGAGGCTGCAATTC...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR TCA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTAGAGAGATGTGTGGCCTaGCCCCGGTGGCAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQQRQSIESLMGYKPNALERCVA*PRWQQE Trigger: CTCCTGCTGCCACCGGGGTCAGGCCACACATCTCTC...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTGGCTGTCCAGATACTTaGCTAGACGGATTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETQFGKSNPTCLTGNGELGCPDT*LDGFFS Trigger: GCTGAAGAATCCGTCTAGCCAAGTATCTGGACAGCC...AAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR CCA 90 bp | AGAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTAGAGAGCAGGTGAGATaGCGGAGCCTGATATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDPVWEIKPNLSNWQRGTREQVR*RSLIFS Trigger: AGAGAATATCAGGCTCCGCCATCTCACCTGCTCTCT...AGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR CCA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTACGGGAGAGAGATGTGTaGCCTGACCCCGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQQRQSIESLMGYKPNALRERDV*PDPGGS Trigger: GCTGCCACCGGGGTCAGGCCACACATCTCTCTCCCG...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCCCAGGCACTGTCTCTTaGCAGTTCCACAAATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPNLSNWQRGTSLEVALTPGTVS*QFHKFL Trigger: CAAAAATTTGTGGAACTGGCAAGAGACAGTGCCTGG...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | GCATCGCACACTGAACACCAAAGCTCTTACTCTCGAATCCAGGGAGCCATATATTTCTCTTCTGTGAGCTaGAAGGCCTTCAGGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASHTEHQSSYSRIQGAIYFSSVS*KAFRRV Trigger: CACTCTCCTGAAGGCCTTCCAGCTCACAGAAGAGAA...ATATATGGCTCCCTGGATTCGAGAGTAAGAGCTTTGGTGTTCAGTGTGCGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGAGGTGATCTTCTCTaGAGGAAAAAGATGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VALTREARAVHFLSCVKVGGDLL*RKKMTI Trigger: GATGGTCATCTTTTTCCTCCAGAGAAGATCACCTCC...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR GCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCTCAGCTGCTCCTCTATaGTTTCTGCATAACTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPNLSNWQRGTSLEVALTSAAPL*FLHNSV Trigger: TACTGAGTTATGCAGAAAGCATAGAGGAGCAGCTGA...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR CCA 90 bp | AAGATGACCATCACTGTTAAGGAGAAGTTTGTAATCCAAGCACCAGGAATACTGCGCCGCAATAGTCCCTaGACAACTGAGGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KMTITVKEKFVIQAPGILRRNSP*TTEEPG Trigger: TCCAGGCTCCTCAGTTGTCCAGGGACTATTGCGGCG...CAGTATTCCTGGTGCTTGGATTACAAACTTCTCCTTAACAGTGATGGTCATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAACACCCACACAGCCAGGGCCAAAATTGTCAAGGCACTCTCCTATTACAGGGTTGTCTGTACAAATaGCTGTCCAGATACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEHPHSQGQNCQGTLLLQGCLYK*LSRYLA Trigger: AGCCAAGTATCTGGACAGCCATTTGTACAGACAACC...CTGTAATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCTCGAAGAAAAAGGCTaGTTCTTATCTTCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETQFGKSNPTCLTGNGELLEEKG*FLSSCS Trigger: GGAACAGGAAGATAAGAATCAGCCTTTTTCTTCGAG...AAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACAATTGTTCCCCTCTAGAATACATCTATCTTCAGCATCTGCTATGGACCGCCGCAATAGTCCCTaGACAACTGAGGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVQLFPSRIHLSSASAMDRRNSP*TTEEPG Trigger: TCCAGGCTCCTCAGTTGTCCAGGGACTATTGCGGCG...GTCCATAGCAGATGCTGAAGATAGATGTATTCTAGAGGGGAACAATTGTACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCATTCTCTTCTGTGAGCTaGAAGGCCTTCAGGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARAVHFLSCVKVGIMCEAFSSVS*KAFRRV Trigger: CACTCTCCTGAAGGCCTTCCAGCTCACAGAAGAGAA...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR CCA 90 bp | AAAGGATTCTGGATGTATAGAGGAGAGGAATCAGGCTTGTTTTGTTCCCTTCCCAGAGAGCAGGTGAGATaGCGGAGCCTGATATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGFWMYRGEESGLFCSLPREQVR*RSLIFS Trigger: AGAGAATATCAGGCTCCGCCATCTCACCTGCTCTCT...GGGAAGGGAACAAAACAAGCCTGATTCCTCTCCTCTATACATCCAGAATCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
||
| CDS-3UTR TCA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTAGCCAAATGTGTTCACTaGGGAGCCAAAGGGCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NQQRQSIESLMGYKPNALAKCVH*GAKGPD Trigger: ATCCGGCCCTTTGGCTCCTCAGTGAACACATTTGGC...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACCCAACTGAGGGCTAGTGGGGGAAGAAAAGTGAGAGAGGGTATGCAATTCCCTGTATTCTTGTaGACATCAAGTTTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTQLRASGGRKVREGMQFPVFL*TSSFPV Trigger: AACTGGAAAACTTGATGTTCACAAGAATACAGGGAA...TTGCATACCCTCTCTCACTTTTCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTGTGTTTCCAGAAGGTTaGATTTTATTCACATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETQFGKSNPTCLTGNGELVFPEG*ILFTSW Trigger: CCAGGATGTGAATAAAATTCAACCTTCTGGAAACAC...AAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | AGAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTTTTGTAGCTGGCTCTaGCTGACATTTTTGCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: RDPVWEIKPNLSNWQRGTFCSWL*LTFLLM Trigger: CATAAGCAAAAATGTCAGTCAGAGCCAGCTACAAAA...AGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGCTATGGACTTTAGGGAATCTAGAGTTGGAAGAATGGGAGGTGATCTTCATCAAAACAGTCCGCTaGGCCTGTTCTCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLWTLGNLELEEWEVIFIKTVR*ACSLLS Trigger: AGAGAGAAGAGAACAGGCCCAGCGGACTGTTTTGAT...GAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGAAGAATGGGAGGTGATCTTCTCTGGAGGAAAAAGATGACCATCACTGTTATCAAAACAGTCCGCTaGGCCTGTTCTCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRMGGDLLWRKKMTITVIKTVR*ACSLLS Trigger: AGAGAGAAGAGAACAGGCCCAGCGGACTGTTTTGAT...AACAGTGATGGTCATCTTTTTCCTCCAGAGAAGATCACCTCCCATTCTTCCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCACAGATAGGATCTTCTaGGTTGCAATTCTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPNLSNWQRGTSLEVALTTDRIF*VAILSE Trigger: TTCAGAAAGAATTGCAACCCAGAAGATCCTATCTGT...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACCCAACTGAGGGCTAGTGGGGGAAGAAAAGTGAGAGAGGGTATGCAAGTTTCAAAAGGATTCTaGATGTATAGAGGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRTQLRASGGRKVREGMQVSKGF*MYRGEE Trigger: TTCCTCTCCTCTATACATCCAGAATCCTTTTGAAAC...TTGCATACCCTCTCTCACTTTTCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTAGAAGAAATGATTATTaGCTGGTCCATGCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: EIKPNLSNWQRGTSLEVARRNDY*LVHAGI Trigger: TATCCCAGCATGGACCAGTCAATAATCATTTCTTCT...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 |
||
| CDS-3UTR TCA 90 bp | GCATCGCACACTGAACACCAAAGCTCTTACTCTCGAATCCAGGGAGCCATATATAGAAGAAATGATTATTaGCTGGTCCATGCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: ASHTEHQSSYSRIQGAIYRRNDY*LVHAGI Trigger: TATCCCAGCATGGACCAGTCAATAATCATTTCTTCT...ATATATGGCTCCCTGGATTCGAGAGTAAGAGCTTTGGTGTTCAGTGTGCGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR TCA 90 bp | AGAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTTCCCTGTATTCTTGTaGACATCAAGTTTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDPVWEIKPNLSNWQRGTFPVFL*TSSFPV Trigger: AACTGGAAAACTTGATGTTCACAAGAATACAGGGAA...AGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTGGTTGCAATTCTTTCTaGAGGAACGTTTTTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAGCNSF*RNVFHL Trigger: CAAGTGAAAAACGTTCCTTCAGAAAGAATTGCAACC...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTAGCATTGAGTATCTTCTaGACACCCACACAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NQQRQSIESLMGYKPNALALSIF*TPTQPG Trigger: CCCTGGCTGTGTGGGTGTTCAGAAGATACTCAATGC...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCATGGAAGAATGGGAGGTaGTCTTCTCTGGAGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARAVHFLSCVKVGIMCEAWKNGR*SSLEEK Trigger: TTTTTCCTCCAGAGAAGATCACCTCCCATTCTTCCA...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR GCA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTAGGGTCTTGTCTTCAATaGCTGTTTCCGCAACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: NQQRQSIESLMGYKPNALGSCLQ*LFPQPP Trigger: CGGTGGTTGCGGAAACAGGCATTGAAGACAAGACCC...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTCTGACCGTATGTGTTCCATTCTaGAATGACTTTATACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPNLSNWQRGTSLEVALTVCVPF*NDFILS Trigger: AGACAGTATAAAGTCATTGCAGAATGGAACACATAC...GGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR GCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTATTCAAAGAGCTTTTTaGTTGAAGGAGGTGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAIQRAF*LKEVTG Trigger: ACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAAT...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR CCA 90 bp | AAGATGACCATCACTGTTAAGGAGAAGTTTGTAATCCAAGCACCAGGAATACTGGGCTGTCCAGATACTTaGCTAGACGGATTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KMTITVKEKFVIQAPGILGCPDT*LDGFFS Trigger: GCTGAAGAATCCGTCTAGCCAAGTATCTGGACAGCC...CAGTATTCCTGGTGCTTGGATTACAAACTTCTCCTTAACAGTGATGGTCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCACTAGAGTTGGAAGAATaGGAGGTGATCTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARAVHFLSCVKVGIMCEALELEE*EVIFSG Trigger: TCCAGAGAAGATCACCTCCCATTCTTCCAACTCTAG...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR CCA 90 bp | GAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTGTTTCAAAAGGATTCTaGATGTATAGAGGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETQFGKSNPTCLTGNGELVSKGF*MYRGEE Trigger: TTCCTCTCCTCTATACATCCAGAATCCTTTTGAAAC...AAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCACTAGAGTTGGAAGAATaGGAGGTGATCTTCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ARAVHFLSCVKVGIMCEALELEE*EVIFFS Trigger: CGAGAAGAAGATCACCTCCCATTCTTCCAACTCTAG...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234924.2 |
||
| 3UTR CAA 72 bp | CTTCAGCATCTGCTATGGACTTTAGGGAATCTAGAGTaGGAAGAATGGGAGGTGATCTTCTCTGGAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQHLLWTLGNLE*EEWEVIFSGGK Trigger: TTTTCCTCCAGAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCAACAGCTGGGAAAATATaGAGCAGCAATGTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARAVHFLSCVKVGIMCEATAGKI*SSNVLN Trigger: ATTGAGGACATTGCTGCTGCATATTTTCCCAGCTGT...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTTTGACTGGTCCATGCTaGGATAAATACTTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EIKPNLSNWQRGTSLEVALTGPC*DKYLRN Trigger: ATTTCTCAAGTATTTATCCCAGCATGGACCAGTCAA...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCCTTCAGCATCTGCTATaGACTTTAGGGAATCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCLQHLL*TLGNLE Trigger: CTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAG...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCATTGTTCTCTTTCCACTaGTATCTGTGGAACTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARAVHFLSCVKVGIMCEALFSFH*YLWNCQ Trigger: CTGACAGTTCCACAGATACCAGTGGAAAGAGAACAA...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| 3UTR CAA 72 bp | AATTCAAAGAGCTTTTTGCTTGAAGGAGGTGACTGGTaGGTTGTCTGTACAAATGGCTGTCCAGATACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKSFLLEGGDW*VVCTNGCPDTW Trigger: CCAAGTATCTGGACAGCCATTTGTACAGACAACCAACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234422.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCGGTTGCAATTCTTTCTaGAGGAACGTTTTTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCGCNSF*RNVFHL Trigger: CAAGTGAAAAACGTTCCTTCAGAAAGAATTGCAACC...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCGTGTTTCCAGAAGGTTaGATTTTATTCACATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCVFPEG*ILFTSW Trigger: CCAGGATGTGAATAAAATTCAACCTTCTGGAAACAC...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGTTGCCTACTCGAAGAAAAAGGCTGATTCTTATCTTCCTGTTCCAAAAATTCAAAGAGCTTTTTaGTTGAAGGAGGTGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVAYSKKKADSYLPVPKIQRAF*LKEVTG Trigger: ACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAAT...TTTTGGAACAGGAAGATAAGAATCAGCCTTTTTCTTCGAGTAGGCAACCCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
||
| CDS-3UTR CCA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTAATCAAAACAGTCCGCTaGGCCTGTTCTCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQQRQSIESLMGYKPNALIKTVR*ACSLLS Trigger: AGAGAGAAGAGAACAGGCCCAGCGGACTGTTTTGAT...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 |
||
| CDS-3UTR GCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATACCAGGCACTGTCTCTTaGCAGTTCCACAAATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFIPGTVS*QFHKFL Trigger: CAAAAATTTGTGGAACTGGCAAGAGACAGTGCCTGG...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCTCAGAGAATTTCTTTTaGAGGGTCTTGTCTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCSENFF*RVLSSM Trigger: CATTGAAGACAAGACCCTCCAAAAGAAATTCTCTGA...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
||
| CDS-3UTR CCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATAGGTTGTCTGTACAAATaGCTGTCCAGATACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFIGCLYK*LSRYLA Trigger: AGCCAAGTATCTGGACAGCCATTTGTACAGACAACC...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR TCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATATCTGGAGGAAAAAGATaGCCATCACTGTTAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFISGGKR*PSLLRR Trigger: TCTCCTTAACAGTGATGGTCATCTTTTTCCTCCAGA...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
||
| CDS-3UTR TCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATACTCGAAGAAAAAGGCTaGTTCTTATCTTCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFILEEKG*FLSSCS Trigger: GGAACAGGAAGATAAGAATCAGCCTTTTTCTTCGAG...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGGTTGCCTACTCGAAGAAAAAGGCTGATTCTTATCTTCCTGTTCCAAAAGTATGTGTTCCATTCTaGAATGACTTTATACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVAYSKKKADSYLPVPKVCVPF*NDFILS Trigger: AGACAGTATAAAGTCATTGCAGAATGGAACACATAC...TTTTGGAACAGGAAGATAAGAATCAGCCTTTTTCTTCGAGTAGGCAACCCTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
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| CDS-3UTR GCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATAACAGCTGGGAAAATATaGAGCAGCAATGTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFITAGKI*SSNVLN Trigger: ATTGAGGACATTGCTGCTGCATATTTTCCCAGCTGT...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR GCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATAAAGCACCAGGAATACTaGTTGTTAATGAATGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFIKHQEY*LLMNVP Trigger: GGGCACATTCATTAACAAGCAGTATTCCTGGTGCTT...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
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| CDS-3UTR CCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATACTTCAGCATCTGCTATaGACTTTAGGGAATCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFILQHLL*TLGNLE Trigger: CTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAG...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| 3UTR CAA 72 bp | CAAGGCACTCTCCTATTACAGATAGGATCTTCTGGGTaGCAATTCTTTCTGAAGGAACGTTTTTCACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGTLLLQIGSSG*QFFLKERFSLE Trigger: TTCAAGTGAAAAACGTTCCTTCAGAAAGAATTGCAACCCAGAAGATCCTATCTGTAATAGGAGAGTGCCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGAATCAGGCTTGTTTTGTTCCCTTCCCTGTCGAATGTTTATGGAATTTTTTGACTGGTCCATGCTaGGATAAATACTTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERNQACFVPFPVECLWNFLTGPC*DKYLRN Trigger: ATTTCTCAAGTATTTATCCCAGCATGGACCAGTCAA...AAAATTCCATAAACATTCGACAGGGAAGGGAACAAAACAAGCCTGATTCCTCTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CCA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATAACAGATAGGATCTTCTaGGTTGCAATTCTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STKTKHRKPDGIQAQCFITDRIF*VAILSE Trigger: TTCAGAAAGAATTGCAACCCAGAAGATCCTATCTGT...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR TCA 90 bp | GGAGCCATATATATAAAGGAGTTCGGAACTTTTCAAAGCAATACTATTGTTAGCAGAAGAAATGATTATTaGCTGGTCCATGCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GAIYIKEFGTFQSNTIVSRRNDY*LVHAGI Trigger: TATCCCAGCATGGACCAGTCAATAATCATTTCTTCT...GCTAACAATAGTATTGCTTTGAAAAGTTCCGAACTCCTTTATATATATGGCTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CCA 90 bp | GGAATCAGGCTTGTTTTGTTCCCTTCCCTGTCGAATGTTTATGGAATTTTTATTTCAGAGAATTTCTTTTaGAGGGTCTTGTCTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GIRLVLFPSLSNVYGIFISENFF*RVLSSM Trigger: CATTGAAGACAAGACCCTCCAAAAGAAATTCTCTGA...AATAAAAATTCCATAAACATTCGACAGGGAAGGGAACAAAACAAGCCTGATTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS CCA 90 bp | CAACTGAGGAGCCTGGAAATAGAGCGCGGGATTCGGTTCCGTCTCTaGGAACACACGGGCAAACGGGTCAATAACCCCACGCCGCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLRSLEIERGIRFRL*EHTGKRVNNPTPRA Trigger: TGCTCGCGGCGTGGGGTTATTGACCCGTTTGCCCGTGTGTTCCCAGAGACGGAACCGAATCCCGCGCTCTATTTCCAGGCTCCTCAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CAA 90 bp | TCTTCCGGGAGAGAGATGTGTGGCCTGACCCCGGTGGCAGCAGGAGGGCAGCCACAAAGAGCTTTTTGCTaGAAGGAGGTGACTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGREMCGLTPVAAGGQPQRAFC*KEVTGW Trigger: CCAACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTG...TGGCTGCCCTCCTGCTGCCACCGGGGTCAGGCCACACATCTCTCTCCCGGAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
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| CDS-3UTR CAA 90 bp | CGGTGGCAGCAGGAGGGCAGCCAGTCCCCAGGGTTGCCTACTCGAAGAAAAAGGTTCTTTTGGAGGGTCTaGTCTTCAATGCCTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWQQEGSQSPGLPTRRKRFFWRV*SSMPVS Trigger: GGAAACAGGCATTGAAGACAAGACCCTCCAAAAGAA...CCTTTTTCTTCGAGTAGGCAACCCTGGGGACTGGCTGCCCTCCTGCTGCCACCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAACCCAACTGAGGGCTAGTGGGGGAAGAAAAGTGAGAGAGGGTATGCAACAGCCAGGGCCAAAATaGTCAAGGCACTCTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SRTQLRASGGRKVREGMQQPGPK*SRHSPI Trigger: AATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTG...TTGCATACCCTCTCTCACTTTTCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTCAGCCAGGGCCAAAATaGTCAAGGCACTCTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: VALTREARAVHFLSCVKVQPGPK*SRHSPI Trigger: AATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTG...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS GCA 90 bp | CTTTCTGCACCTCAGAGAATTTCTTTTGGAGGGTCTTGTCTTCAATaGCTGTTTCCGCAACCACCGAAGACTGTTCTTCGCTCCCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LSAPQRISFGGSCLQ*LFPQPPKTVLRSRC Trigger: GCATCGGGAGCGAAGAACAGTCTTCGGTGGTTGCGGAAACAGGCATTGAAGACAAGACCCTCCAAAAGAAATTCTCTGAGGTGCAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAACCCAACTGAGGGCTAGTGGGGGAAGAAAAGTGAGAGAGGGTATGCAATTCTTTTGGAGGGTCTaGTCTTCAATGCCTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRTQLRASGGRKVREGMQFFWRV*SSMPVS Trigger: GGAAACAGGCATTGAAGACAAGACCCTCCAAAAGAA...TTGCATACCCTCTCTCACTTTTCTTCCCCCACTAGCCCTCAGTTGGGTTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234422.2 |
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| CDS-3UTR CAA 90 bp | GTAGCTCTGACCCGGGAGGCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTAATTCAAAGAGCTTTTaGCTTGAAGGAGGTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VALTREARAVHFLSCVKVNSKSF*LEGGDW Trigger: CCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAATT...AACTTTCACACAGGAGAGGAAATGTACAGCTCTAGCCTCCCGGGTCAGAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
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| CDS-3UTR CAA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCGAGGTGACTGGTTGGTaGTCTGTACAAATGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCEVTGW*SVQMAV Trigger: GACAGCCATTTGTACAGACAACCAACCAGTCACCTC...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 |
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| CDS-3UTR CAA 90 bp | TCTGAACACCCACACAGCCAGGGCCAAAATTGTCAAGGCACTCTCCTATTACAGAATTCAAAGAGCTTTTaGCTTGAAGGAGGTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SEHPHSQGQNCQGTLLLQNSKSF*LEGGDW Trigger: CCAGTCACCTCCTTCAAGCAAAAAGCTCTTTGAATT...CTGTAATAGGAGAGTGCCTTGACAATTTTGGCCCTGGCTGTGTGGGTGTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
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| CDS GCA 90 bp | CAATGTATCAAAACAGTCCGCTGGGCCTGTTCTCTTCTCTCTTTCTaGACCTCAGAGAATTTCTTTTGGAGGGTCTTGTCTTCAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QCIKTVRWACSLLSF*TSENFFWRVLSSMP Trigger: AGGCATTGAAGACAAGACCCTCCAAAAGAAATTCTCTGAGGTGCAGAAAGAGAGAAGAGAACAGGCCCAGCGGACTGTTTTGATACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCTTCTTTTGGAGGGTCTaGTCTTCAATGCCTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCFFWRV*SSMPVS Trigger: GGAAACAGGCATTGAAGACAAGACCCTCCAAAAGAA...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS-3UTR CAA 90 bp | AGAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTTCAAAGCAATACTATaGTTAGCAGTCAGATCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RDPVWEIKPNLSNWQRGTFKAIL*LAVRSH Trigger: GTGTGATCTGACTGCTAACAATAGTATTGCTTTGAA...AGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCATTAGGGAATCTAGAGTaGGAAGAATGGGAGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: ARAVHFLSCVKVGIMCEALGNLE*EEWEVI Trigger: GATCACCTCCCATTCTTCCAACTCTAGATTCCCTAA...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCTTAGGGAATCTAGAGTaGGAAGAATGGGAGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCLGNLE*EEWEVI Trigger: GATCACCTCCCATTCTTCCAACTCTAGATTCCCTAA...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | GAGACCCAGTTTGGGAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTTGTGTTTCCAGAAGGTaGAATTTTATTCACATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETQFGKSNPTCLTGNGELCVSRR*NFIHIL Trigger: CAGGATGTGAATAAAATTCAACCTTCTGGAAACACA...AAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTCCCAAACTGGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGGCCTATGAACATTTAGTGGCAGTTCTTCCCAGAAGTTCAAAAGGCTGCGATGCTAACAAGCCTTaGACTTTTTCACTCATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKAYEHLVAVLPRSSKGCDANKP*TFSLIG Trigger: GCCGATGAGTGAAAAAGTCAAAGGCTTGTTAGCATC...GCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTCATAGGCCTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | GAAATCAAACCCAACCTGTCTAACTGGCAACGGGGAACTTCGCTTGAAGTAGCTAAATCACATCCTAATTaGCCAAATGTGTTCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EIKPNLSNWQRGTSLEVAKSHPN*PNVFTE Trigger: CTCAGTGAACACATTTGGCAAATTAGGATGTGATTT...AGCTACTTCAAGCGAAGTTCCCCGTTGCCAGTTAGACAGGTTGGGTTTGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS CCA 90 bp | AAGTTCAAGAACCGTGACTTAAATGGAATTGCAGCCTCTGTGCTCTaGGTTGGAGTATGTGTTCCATTCTGCAATGACTTTATACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KFKNRDLNGIAASVL*VGVCVPFCNDFILS Trigger: AGACAGTATAAAGTCATTGCAGAATGGAACACATACTCCAACCCAGAGCACAGAGGCTGCAATTCCATTTAAGTCACGGTTCTTGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 |
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| CDS CCA 90 bp | CTTCAGCATCTGCTATGGACTTTAGGGAATCTAGAGTTGGAAGAATaGGAGGTGATCTTCTTCTCGAATCCAGGGAGCCATATATATAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQHLLWTLGNLELEE*EVIFFSNPGSHIYK Trigger: TTTATATATATGGCTCCCTGGATTCGAGAAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | TTTATGGATGCTAACAAGCCTTTGACTTTTTCACTCATCGGCTTTTTCTTCTTCGAGGTGACTGGTTGGTaGTCTGTACAAATGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FMDANKPLTFSLIGFFFFEVTGW*SVQMAV Trigger: GACAGCCATTTGTACAGACAACCAACCAGTCACCTC...GAAGAAGAAAAAGCCGATGAGTGAAAAAGTCAAAGGCTTGTTAGCATCCATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234186.2 |
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| CDS-3UTR CAA 90 bp | AATCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTACAAAGAGCTTTTTGCTaGAAGGAGGTGACTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NQQRQSIESLMGYKPNALQRAFC*KEVTGW Trigger: CCAACCAGTCACCTCCTTCAAGCAAAAAGCTCTTTG...TAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
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| CDS-3UTR CAA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATACACCAGGAATACTGCTaGTTAATGAATGTGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: STKTKHRKPDGIQAQCFIHQEYC*LMNVPE Trigger: CTCGGGCACATTCATTAACAAGCAGTATTCCTGGTG...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025077.7 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCTGTACATTTCCTCTCCTGTGTGAAAGTTGGGATTATGTGTGAAGCATTCAAAGCAATACTATaGTTAGCAGTCAGATCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ARAVHFLSCVKVGIMCEAFKAIL*LAVRSH Trigger: GTGTGATCTGACTGCTAACAATAGTATTGCTTTGAA...TGCTTCACACATAATCCCAACTTTCACACAGGAGAGGAAATGTACAGCTCTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATAGATGCTAACAAGCCTTaGACTTTTTCACTCATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: STKTKHRKPDGIQAQCFIDANKP*TFSLIG Trigger: GCCGATGAGTGAAAAAGTCAAAGGCTTGTTAGCATC...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS-3UTR CAA 90 bp | TCAACAAAGACAAAGCATAGAAAGCCTGATGGGATACAAGCCCAATGCTTTATATGTGTTTCCAGAAGGTaGAATTTTATTCACATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: STKTKHRKPDGIQAQCFICVSRR*NFIHIL Trigger: CAGGATGTGAATAAAATTCAACCTTCTGGAAACACA...TATAAAGCATTGGGCTTGTATCCCATCAGGCTTTCTATGCTTTGTCTTTGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025077.7 ENSMUST00000234924.2 |
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| CDS CCA 72 bp | AGCCTGGAAATAGAGCGCGGGATTCGGTTCCGTCTCTaGGAACACACGGGCAAACGGGTCAATAACCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SLEIERGIRFRL*EHTGKRVNNPT Trigger: CGTGGGGTTATTGACCCGTTTGCCCGTGTGTTCCCAGAGACGGAACCGAATCCCGCGCTCTATTTCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS CCA 72 bp | CTGTTCTTCGCTCCCGATGCTCGCCGCAATAGTCCCTaGACAACTGAGGAGCCTGGAAATAGAGCGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LFFAPDARRNSP*TTEEPGNRARD Trigger: ATCCCGCGCTCTATTTCCAGGCTCCTCAGTTGTCCAGGGACTATTGCGGCGAGCATCGGGAGCGAAGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS CCA 72 bp | CTGCTATGGACTTTAGGGAATCTAGAGTTGGAAGAATaGGAGGTGATCTTCTTCTCGAATCCAGGGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLWTLGNLELEE*EVIFFSNPGSH Trigger: ATGGCTCCCTGGATTCGAGAAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234924.2 |
||
| CDS CAA 72 bp | TCTTTCTGCACCTCAGAGAATTTCTTTTGGAGGGTCTaGTCTTCAATGCCTGTTTCCGCAACCACCGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFCTSENFFWRV*SSMPVSATTED Trigger: GTCTTCGGTGGTTGCGGAAACAGGCATTGAAGACAAGACCCTCCAAAAGAAATTCTCTGAGGTGCAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025077.7 ENSMUST00000234186.2 ENSMUST00000234422.2 |
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| CDS CAA 90 bp | TACATCTATCTTCAGCATCTGCTATGGACTTTAGGGAATCTAGAGTaGGAAGAATGGGAGGTGATCTTCTTCTCGAATCCAGGGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YIYLQHLLWTLGNLE*EEWEVIFFSNPGSH Trigger: ATGGCTCCCTGGATTCGAGAAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAGATAGATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234924.2 |
||
| CDS CAA 72 bp | CTTCAGCATCTGCTATGGACTTTAGGGAATCTAGAGTaGGAAGAATGGGAGGTGATCTTCTTCTCGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQHLLWTLGNLE*EEWEVIFFSNP Trigger: TGGATTCGAGAAGAAGATCACCTCCCATTCTTCCAACTCTAGATTCCCTAAAGTCCATAGCAGATGCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234924.2 |
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