RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTOR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028991

Ensembl transcript IDs: ENSMUST00000057580.8, ENSMUST00000103221.10

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGCCAGTGTGGCCCCGCATGGAGATCCTTGGCACACCTGCTCATaGCCGGTGGCCAGGCTTCTGAACAAATGTCCTCCTGGAAGGGCA +
Preference number: 1 (lower is better)
Translates to: RASVAPHGDPWHTCS*PVARLLNKCPPGRA
Trigger: TGCCCTTCCAGGAGGACATTTGTTCAGAAGCCTGGCCACCGGGCATGAGCAGGTGTGCCAAGGATCTCCATGCGGGGCCACACTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CCA 90 bp CTCACTGAACACAGTAGAGCCAGTGTGGCCCCGCATGGAGATCCTTaGCACACCTGCTCATGCCCGGTGGCCAGGCTTCTGAACAAATGT +
Preference number: 1 (lower is better)
Translates to: LTEHSRASVAPHGDP*HTCSCPVARLLNKC
Trigger: ACATTTGTTCAGAAGCCTGGCCACCGGGCATGAGCAGGTGTGCCAAGGATCTCCATGCGGGGCCACACTGGCTCTACTGTGTTCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CCA 90 bp AAAATATTTAACAAGTCCAACTGTCTGTCCATGGTTTTAGTCCACTaGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGACGTGG +
Preference number: 1 (lower is better)
Translates to: KIFNKSNCLSMVLVH*KHRQGTKAWEETTW
Trigger: CCACGTCGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCATGGACAGACAGTTGGACTTGTTAAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CCA 90 bp ACCTCTGTGTCCTTGCCGTTGGAGCCCCTGGTTGAGAGGACCAACTaGATTATTCTGTCAGCAATGTTTATGATGAGTTTTCTTGTAAGT +
Preference number: 1 (lower is better)
Translates to: TSVSLPLEPLVERTN*IILSAMFMMSFLVS
Trigger: ACTTACAAGAAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAGGGGCTCCAACGGCAAGGACACAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR-3UTR GCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACCGACCTCTGTGTCCTTaGCGTTGGAGCCCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDRPLCP*RWSPWL
Trigger: CAACCAGGGGCTCCAACGGCAAGGACACAGAGGTCG...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGCCAAAATCCAAGGCTTaGCTTCTGAAGGATTACTGT +
Preference number: 2 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRPKSKA*LLKDYC
Trigger: ACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGG...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CAA 90 bp CGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTaGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTGAA +
Preference number: 2 (lower is better)
Translates to: RISQLPIFCSPKIQG*ASEGLLCFTVLGTE
Trigger: TTCAGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR-3UTR TCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTGGCGGAAGCCAACTTTaGATATACAGTAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAGGSQL*IYSSSF
Trigger: AAAAGAACTACTGTATATTCAAAGTTGGCTTCCGCC...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR GCA 72 bp GTGGCCCCGCATGGAGATCCTTGGCACACCTGCTCATaGCCGGTGGCCAGGCTTCTGAACAAATGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: VAPHGDPWHTCS*PVARLLNKCPP
Trigger: AGGAGGACATTTGTTCAGAAGCCTGGCCACCGGGCATGAGCAGGTGTGCCAAGGATCTCCATGCGGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR GCA 72 bp GCCAGTGTGGCCCCGCATGGAGATCCTTGGCACACCTaGTCATGCCCGGTGGCCAGGCTTCTGAACAAATGT +
Preference number: 3 (lower is better)
Translates to: ASVAPHGDPWHT*SCPVARLLNKC
Trigger: ACATTTGTTCAGAAGCCTGGCCACCGGGCATGAGCAGGTGTGCCAAGGATCTCCATGCGGGGCCACACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR GCA 72 bp GGTAACAGGATAGTGGAGTGCCGACCTCTGTGTCCTTaGCGTTGGAGCCCCTGGTTGAGAGGACCAACTGGA +
Preference number: 3 (lower is better)
Translates to: GNRIVECRPLCP*RWSPWLRGPTG
Trigger: TCCAGTTGGTCCTCTCAACCAGGGGCTCCAACGGCAAGGACACAGAGGTCGGCACTCCACTATCCTGTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR GCA 72 bp CGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTaGAAATGTCGCCACTGCATCCAGGGACGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: RKTDSLSHVGPS*KCRHCIQGRVR
Trigger: CCTCACCCGTCCCTGGATGCAGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CCA 72 bp ATGCCCGGTGGCCAGGCTTCTGAACAAATGTCCTCCTaGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGG +
Preference number: 3 (lower is better)
Translates to: MPGGQASEQMSS*KGRSCEFQHRG
Trigger: CCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACATTTGTTCAGAAGCCTGGCCACCGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR TCA 72 bp GCCGACCTCTGTGTCCTTGCCGTTGGAGCCCCTGGTTaGGAGGACCAACTGGATTATTCTGTCAGCAATGTT +
Preference number: 3 (lower is better)
Translates to: ADLCVLAVGAPG*EDQLDYSVSNV
Trigger: AACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAGGGGCTCCAACGGCAAGGACACAGAGGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CCA 72 bp AACAAGTCCAACTGTCTGTCCATGGTTTTAGTCCACTaGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: NKSNCLSMVLVH*KHRQGTKAWEE
Trigger: CTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCATGGACAGACAGTTGGACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CCA 72 bp TCCTTGCCGTTGGAGCCCCTGGTTGAGAGGACCAACTaGATTATTCTGTCAGCAATGTTTATGATGAGTTTT +
Preference number: 3 (lower is better)
Translates to: SLPLEPLVERTN*IILSAMFMMSF
Trigger: AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAGGGGCTCCAACGGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR TCA 72 bp CTAAGAAAACACAATATAGTAACAACAGAATCACAGTaGGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATG +
Preference number: 3 (lower is better)
Translates to: LRKHNIVTTESQ*AGESRAKLKQM
Trigger: CATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTGTTACTATATTGTGTTTTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCATAGAGCACAGCAGTaGGCGCGGGGCTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTHRAQQ*ARGSGP
Trigger: TGGGCCTGAGCCCCGCGCTCACTGCTGTGCTCTATG...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAGCGTTGGACACCAGGTaGCCCAGCATGCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPALDTR*PSMRAL
Trigger: GAGCGCCCGCATGCTGGGGCACCTGGTGTCCAACGC...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTTGGCGGCACTGGCGGTaGCCACGGCAGGACCCGTCC +
Preference number: 4 (lower is better)
Translates to: RITVSRREPCQAQTDVRPWRHWR*PRQDPS
Trigger: GGACGGGTCCTGCCGTGGCCACCGCCAGTGCCGCCA...AGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCACCAGGCCTTTGGGCATaGCTGGGTGCCGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPPGLWA*LGAGGV
Trigger: AACCCCTCCGGCACCCAGGCATGCCCAAAGGCCTGG...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGTCTGTGGCGATGGCATaGTGGGCCTGCTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRSVAMA*WACCCM
Trigger: CATGCAGCAGCAGGCCCAGCATGCCATCGCCACAGA...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGGGCCCACAGTGCAGATaGCCAGCTCGCGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRGPQCR*PARGSQ
Trigger: TTGAGATCCGCGAGCTGGCCATCTGCACTGTGGGCC...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGGCAGAGGGGACGGGGTaGGGCTGTTCTCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRAEGTG*GCSHCS
Trigger: AGAGCAATGAGAACAGCCCCACCCCGTCCCCTCTGC...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACCATAGCGCTGGTGGTTaGTCCGGTGTCGCACGAGGA +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDHSAGG*SGVARG
Trigger: TCCTCGTGCGACACCGGATCAACCACCAGCGCTATG...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGCGGCCCCATTGCTCGTaGCAACATGCTGATGCACGT +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRRPHCS*QHADAR
Trigger: ACGTGCATCAGCATGTTGGCACGAGCAATGGGGCCG...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTTTAGTCGGCCCACAGTaGAGATGGCCAGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTLVGPQ*RWPARG
Trigger: TCCGCGAGCTGGCCATCTGCACTGTGGGCCGACTAA...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTGCCAGCGCCTTCCCGGATaGCCTGCTTGGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: NHSEQERAVPSSNRCKACQRLPG*PAWGPT
Trigger: TGTGGGACCCCAAGCAGGCCATCCGGGAAGGCGCTG...GCAGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAGCCTTTGGGCATGCCTaGGTGCCGGAGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPAFGHA*VPEGFV
Trigger: CACAAACCCCTCCGGCACCCAGGCATGCCCAAAGGC...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTGTGGCGATGGCATGCTaGGCCTGCTGCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATVAMAC*ACCCMV
Trigger: GACCATGCAGCAGCAGGCCCAGCATGCCATCGCCAC...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTGTGAGAAGCTGGTaGATGAGCCGGCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDSVRSW*MSRPTK
Trigger: CTTGGTGGGCCGGCTCATTCACCAGCTTCTCACAGA...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTGTAGTCCCGGATaGGGGCATGCAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTLCSPG*GHAVCH
Trigger: GTGACACACTGCATGCCCTCATCCGGGACTACAGAG...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTAGTCCACTGGCGAACTaGTGCAGGACGCTCACGTTG +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTSPLAN*CRTLTL
Trigger: CAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACT...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACCTCCCAATGCCGCTGTaGTCCAGCTCTGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDLPMPL*SSSVRI
Trigger: GATCCTGACAGAGCTGGAGCACAGCGGCATTGGGAG...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTCTCTCCCACCAGATCTaGCGGATGATCTCCCGACGC +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATLSHQI*RMISRR
Trigger: GCGTCGGGAGATCATCCGGCAGATCTGGTGGGAGAG...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTTGCAGCTCCTGCTTGTaGTGCTGGTCCTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATCSSCL*CWSSVA
Trigger: CGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCA...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCCGGATGAGGGCATaGAGTGTGTCACAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPSRMRA*SVSQWG
Trigger: GCCCCACTGTGACACACTGCATGCCCTCATCCGGGA...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAGCTCTCTCCTGCCATaGCAGTCAGCTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRSSLLP*QSALHP
Trigger: TGGATGCAGAGCTGACTGCCATGGCAGGAGAGAGCT...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGTCCTCAACAATACGCTaGCAGCCCTGCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRSSTIR*QPCSLS
Trigger: GGAGAGACTGCAGGGCTGCCAGCGTATTGTTGAGGA...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCTGCTGGTCCTCTGTaGCGATGGCATGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLAAGPL*RWHAGP
Trigger: AGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGC...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CAA 72 bp GTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTaGGCCCATCCTGCAAATGTCGCCACTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VGSGGRQTLLAM*AHPANVATASR
Trigger: CCTGGATGCAGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTCTCGAAGCTCCATGGTaGCGTAGTGCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATLEAPW*RSAGAP
Trigger: AGGAGCTCCAGCACTACGTCACCATGGAGCTTCGAG...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGCTGTCAGGATCTGGATaGGCATCTTGCGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRLSGSG*ASCAGK
Trigger: CTTTCCTGCGCAAGATGCTCATCCAGATCCTGACAG...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACGGCTGTTGTCATGCATaGAGACCCGCAGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDGCCHA*RPAACV
Trigger: CACACATGCTGCGGGTCTTCATGCATGACAACAGCC...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGGACGGGGCTATGGATTaGATGCGAATGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRDGAMD*MRMIGW
Trigger: CCAGCCAATCATTCGCATTCAATCCATAGCCCCGTC...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTCCACTGGCGAACTGCTaGAGGACGCTCACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATPLANC*RTLTLL
Trigger: TAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGG...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAGCTTATGCAGCTCCTaGTTGTGCTGCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRSLCSS*LCCWSS
Trigger: AGAGGACCAGCAGCACAAGCAGGAGCTGCATAAGCT...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTTTGGGGGACACATACTaGAGCTCCAGGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTLGDTY*SSRDVS
Trigger: GCTCACATCCCTGGAGCTGCAGTATGTGTCCCCCAA...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTCCCGGATGGCCTGCTTaGGGTCCCACACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: RITVSRREPCQAQTDVRPPGWPA*GPTQPQ
Trigger: TTGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGG...AGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTAATGTGGGCATGACCTaGGGCAGGAACTGCACACAC +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTNVGMT*GRNCTH
Trigger: GTGTGTGCAGTTCCTGCCCCAGGTCATGCCCACATT...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTCTCTCGTTGATGCCCTaGAGGTTCAGCTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATLSLMP*RFSCHS
Trigger: GGAGTGGCAGCTGAACCTCCAGGGCATCAACGAGAG...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGTCCAGGGATGTGAGCTaGGGTAGCTGCTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRSRDVS*GSCFEI
Trigger: GATCTCAAAGCAGCTACCCCAGCTCACATCCCTGGA...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATTAGCCACAGTAGCTTaGCCAGGTCGTCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPLATVA*PGRPQL
Trigger: CAGCTGGGGACGACCTGGCCAAGCTACTGTGGCTAA...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTGCGTTCCCGCTGCGTGGTaGGAATCAGACAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: NHSEQERAVPSSNRCKACVPAAW*ESDRHE
Trigger: TTCGTGCCTGTCTGATTCTCACCACGCAGCGGGAAC...GCAGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACGTGTGCCGGTACCACTaGGGCTTCTGCATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDVCRYH*GFCISF
Trigger: AAAGGAAATGCAGAAGCCTCAGTGGTACCGGCACAC...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp AATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTGCAGTCCACTGGCGAACTaGTGCAGGACGCTCACGTTG +
Preference number: 4 (lower is better)
Translates to: NHSEQERAVPSSNRCKACSPLAN*CRTLTL
Trigger: CAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACT...GCAGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCGCTCGTCCAGGGATaGCAAGACACAGTAGCGGAT +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLALVQG*QDTVAD
Trigger: ATCCGCTACTGTGTCTTGGCATCCCTGGACGAGCGC...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTCAGTGCTTTGGCATATaGCCGGCACTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATQCFGI*PALGSS
Trigger: AGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTG...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACCTTGCCACACAGGCTTaGGTACTTGAGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDLATQA*VLEPGS
Trigger: AGAACCTGGCTCAAGTACGCAAGCCTGTGTGGCAAG...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTCCAGTCTGCCACTCTTaGCACACAGGCTTGCGTACT +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATPVCHS*HTGLRT
Trigger: AGTACGCAAGCCTGTGTGGCAAGAGTGGCAGACTGG...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTTGCTGGGCCTGCTGCTaGATGGTCTGCACAAAGTGT +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATCWACC*MVCTKC
Trigger: ACACTTTGTGCAGACCATGCAGCAGCAGGCCCAGCA...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCACCCTGGAGGTTCAGCTaGCACTCCCCAAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPPWRFS*HSPSFR
Trigger: TCTGAAACTTGGGGAGTGGCAGCTGAACCTCCAGGG...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGGTTCATCACTGCCCATaGATGCCAAGCCTTGTACCA +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRVHHCP*MPSLVP
Trigger: TGGTACAAGGCTTGGCATGCATGGGCAGTGATGAAC...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCACTTCACTCTCACTGTTaGTGCCCTCTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPLHSHC*CPLCWW
Trigger: CCACCAGCACAGAGGGCAGCAACAGTGAGAGTGAAG...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGTGGGGCTGTTCTCATTaGTCTCAGCTTCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRWGCSH*SQLHSH
Trigger: GTGAGAGTGAAGCTGAGAGCAATGAGAACAGCCCCA...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTGCTGGCTGCTTTGGCCCTaGTCTCCTCATTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: NHSEQERAVPSSNRCKACWLLWP*SPHSGS
Trigger: AGAGCCGGAATGAGGAGACCAGGGCCAAAGCAGCCA...GCAGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGCCCGGATGGCCTGCTTaGGGTCCCACACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETPGWPA*GPTQPQ
Trigger: TTGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGG...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACAGCATCCCCAGCTGCTaGAACAGAAATTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDSIPSC*NRNSRM
Trigger: CATCCGGGAATTTCTGTTCCAGCAGCTGGGGATGCT...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTGATAGTCATCCAGGTTaGCGCCAAACAGCTGGATCG +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTDSHPG*RQTAGS
Trigger: CGATCCAGCTGTTTGGCGCCAACCTGGATGACTATC...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTGCTTCTCATACCAGGTaGCCTGGATCTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATASHTR*PGSPAL
Trigger: GAGAGCTGGAGATCCAGGCCACCTGGTATGAGAAGC...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAATCGTGGGTGTCCCGTaGGATCATGCAGGTGTACTC +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPIVGVP*DHAGVL
Trigger: GAGTACACCTGCATGATCCCACGGGACACCCACGAT...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCACATCCAGCAGGTCCCTaGCCTTGTCAATGCACTGCT +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPHPAGP*PCQCTA
Trigger: AGCAGTGCATTGACAAGGCCAGGGACCTGCTGGATG...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTTTGAGGGTGAGCGGTTaGCAGAGGATGGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTLRVSG*QRMVKL
Trigger: CAACTTGACCATCCTCTGCCAACCGCTCACCCTCAA...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGGGGCGCTCTGCTCCTTaGTTCTCCCAATGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETGRSAP*FSQCRC
Trigger: ACAGCGGCATTGGGAGAATCAAGGAGCAGAGCGCCC...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTGTCCTCATGAGGGCTaGCCACAAGGGACCGGACCA +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETCPHEG*PQGTGP
Trigger: TGGTCCGGTCCCTTGTGGTCAGCCCTCATGAGGACA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTGGCGATGGCCAAGATaGCACCCTTCCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: QNHSEQERAVPSSNRCKAWRWPR*HPSSHW
Trigger: CCAATGAGAGGAAGGGTGGCATCTTGGCCATCGCCA...GGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGTGGCGATGGCCAAGATaGCACCCTTCCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLWRWPR*HPSSHW
Trigger: CCAATGAGAGGAAGGGTGGCATCTTGGCCATCGCCA...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACCCTTCCCGGATGGCCTaGTTGGGGTCCCACACAGCC +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNPSRMA*LGSHTA
Trigger: GGCTGTGTGGGACCCCAAGCAGGCCATCCGGGAAGG...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTGGGGCTCAGGCCCACTaGCAACATGGGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAGAQAH*QHGLQQ
Trigger: CTGCTGGAGCCCATGTTGGCAGTGGGCCTGAGCCCC...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAGCCTTGTCAATGCACTaGTGGGCCAAGGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPALSMH*WAKEKR
Trigger: TCTCTTCTCCTTGGCCCAGCAGTGCATTGACAAGGC...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACAGAGGATGGTCAAGTTaGCGAGATGGATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDRGWSS*RDGSTP
Trigger: GGGAGTTGATCCATCTCGGCAACTTGACCATCCTCT...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTACTCATGCCCATTGCTaGCCATCAGAGTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATTHAHC*PSESAS
Trigger: GGAAGCTGACTCTGATGGGCAGCAATGGGCATGAGT...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGGCTCTTCAGTCCACTaGCGAACTGCTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKGSSVH*RTAAGR
Trigger: GCGTCCTGCAGCAGTTCGCCAGTGGACTGAAGAGCC...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGGGCTCTTCAGTCCACTaGCGAACTGCTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETGSSVH*RTAAGR
Trigger: GCGTCCTGCAGCAGTTCGCCAGTGGACTGAAGAGCC...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACCGGGCCATCTTAGCCTaGGTCTCATCATTAACCAGA +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDRAILA*VSSLTR
Trigger: TCTGGTTAATGATGAGACCCAGGCTAAGATGGCCCG...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATGCGGTCATGCTCTGTaGCGGCACTGTAGTACTGTA +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPCGHAL*RHCSTV
Trigger: TACAGTACTACAGTGCCGCCACAGAGCATGACCGCA...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTATGAGGGCCTGTGGGTaGTACCGACCAATATCTGTG +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATMRACG*YRPISV
Trigger: CACAGATATTGGTCGGTACCACCCACAGGCCCTCAT...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGATGACAGCGTATCTCTaGATGCTGAGGTTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRMTAYL*MLRFLR
Trigger: TCGCAAGAACCTCAGCATCCAGAGATACGCTGTCAT...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CAA 72 bp TGCCGACCTCTGTGTCCTTGCCGTTGGAGCCCCTGGTaGAGAGGACCAACTGGATTATTCTGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: CRPLCPCRWSPW*RGPTGLFCQQC
Trigger: ACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAGGGGCTCCAACGGCAAGGACACAGAGGTCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGCTCGAAGCTCCATGGTaGCGTAGTGCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKLEAPW*RSAGAP
Trigger: AGGAGCTCCAGCACTACGTCACCATGGAGCTTCGAG...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGCACCTTCCACTCCTATaGGGCTGGCGATGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKHLPLL*GWRWPR
Trigger: TCTTGGCCATCGCCAGCCTCATAGGAGTGGAAGGTG...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGCCAGCTGCTGCTGGGTaGTCTCCTCCATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETPAAAG*SPPSLL
Trigger: GAGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGG...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGTGGTCCCGAAGCCCATaGGGTCTTTGCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLWSRSP*GLCSTC
Trigger: ACAAGTACTGCAAAGACCTCATGGGCTTCGGGACCA...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCTGGACTCTGACAGGCTaGCAGCGGAAGCGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVWTLTG*QRKRPG
Trigger: CCCGGGACGCTTCCGCTGTCAGCCTGTCAGAGTCCA...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCAGGTTTCCCATGTTaGCCAGCATTTCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLAGFPC*PAFHWC
Trigger: GCACCAGTGAAATGCTGGTCAACATGGGAAACCTGC...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCGGGGCACCCAGCCAATaGGGCCCGAGTTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVGAPSQ*GPSWWT
Trigger: TGTCCACCAACTCGGGCCTCATTGGCTGGGTGCCCC...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTAGAAATCCCGACCAGTaGGCTTATCTCGAACCCTGT +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATRNPDQ*AYLEPC
Trigger: ACAGGGTTCGAGATAAGCTCACTGGTCGGGATTTCT...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGCCACTGGCGAACTGCTaGAGGACGCTCACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKPLANC*RTLTLL
Trigger: TAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGG...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGAGTGAAAGTGTCCCCTaGCATCGCCAGGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKSESVP*HRQAAN
Trigger: ATTGGCCGCCTGGCGATGGCAGGGGACACTTTCACT...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGAGTGAAAGTGTCCCCTaGCATCGCCAGGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETSESVP*HRQAAN
Trigger: ATTGGCCGCCTGGCGATGGCAGGGGACACTTTCACT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCGGCGGACGGTCGGAATaGAGCCAGGCGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSGGRSE*SQAGQQ
Trigger: CTGCTGCCCCGCCTGGCTGCATTCCGACCGTCCGCC...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGAGGCTGGGTTCATGCTaGTTAGTCGGCCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETRLGSC*LVGPQC
Trigger: GCACTGTGGGCCGACTAAGCAGCATGAACCCAGCCT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAAGGTGTACTCCTCCATaGTGTCCCACTGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPRCTPP*CPTDLN
Trigger: GTTTAGGTCAGTGGGACAGCATGGAGGAGTACACCT...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACAAAGTACAAGCGAGATaGCTCTTCCAGGCCTTCATG +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDKVQAR*LFQAFM
Trigger: CATGAAGGCCTGGAAGAGGCATCTCGCTTGTACTTT...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCTCCTTGGCTGCTTTaGCCCTGGTCTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKAPWLL*PWSPHS
Trigger: GGAATGAGGAGACCAGGGCCAAAGCAGCCAAGGAGC...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGCAAATCTGCCAATTCTaGTGGAATTCCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRQICQF*WNSHLP
Trigger: TGGAAGGTGGGAATTCCACCAGAATTGGCAGATTTG...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCCACCAGAGTGGACTTaGCAGGGCTGGGGGACGTCC +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVPPEWT*QGWGTS
Trigger: GGACGTCCCCCAGCCCTGCCAAGTCCACTCTGGTGG...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTCTGCCTGGGCCAGGTaGGCATCAAAGCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLASAWAR*ASKRSS
Trigger: GGACGAGCGCTTTGATGCCCACCTGGCCCAGGCAGA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTCTCCGAAGTGTTTCATaGCGTATTCCAACACCCCAG +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATLRSVS*RIPTPQ
Trigger: CTGGGGTGTTGGAATACGCCATGAAACACTTCGGAG...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTCTCACCCGGTACCACTaGGGCTTCTGCATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RITVSRREPCQAQTDVRPLTRYH*GFCISF
Trigger: AAAGGAAATGCAGAAGCCTCAGTGGTACCGGGTGAG...AGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATAGCTCCAGCAGCTCCTTaGTGTCCTGCTGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIAPAAP*CPAGCP
Trigger: CGGGCATCCAGCAGGACATCAAGGAGCTGCTGGAGC...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACCAGTGGTGGCATTGGTaGTGTTGGCCCCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNQWWHW*CWPRWH
Trigger: ATGCCAGCGGGGCCAACATCACCAATGCCACCACTG...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTTGTTGGCTGCATTGTaGCGGGCTGTGGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETLLAAL*RAVVVD
Trigger: GTCTACCACCACAGCCCGTCACAATGCAGCCAACAA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGAAGCTGCCTCAGGCTaGTGGAGCTTGTTGTTAATG +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLEAASG*WSLLLM
Trigger: CATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTC...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTACAAAGTGTTGCATGTaGTGGAAGGCGTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTTKCCM*WKASIF
Trigger: GAAGATTGACGCCTTCCAGCACATGCAACACTTTGT...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCTGGACCAGCGTGTTaGTGTGTTCACACATGTTCT +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLAGPAC*CVHTCS
Trigger: AGAACATGTGTGAACACAGCAACACGCTGGTCCAGC...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACGGTTTCGAAGGTAGTTaGCAAATCTGCCAATTCTGG +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDGFEGS*QICQFW
Trigger: CCAGAATTGGCAGATTTGCCAACTACCTTCGAAACC...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTGGACTTGGCAGGGCTaGGGGACGTCCCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAWTWQG*GTSQIP
Trigger: TGGGATTTGGGACGTCCCCCAGCCCTGCCAAGTCCA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACTGGCCGCTGATGAGGTaGATGGAGGGTGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNWPLMR*MEGVSR
Trigger: CCTGCTCACACCCTCCATCCACCTCATCAGCGGCCA...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACGTCTGGCTAACCACGTaGGCATGGCCGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNVWLTT*AWPLMR
Trigger: CCTCATCAGCGGCCATGCCCACGTGGTTAGCCAGAC...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTCCACATAGCCAGTGCTaGCCACCAACTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAPHSQC*PPTVPG
Trigger: CCCTGGGACAGTTGGTGGCCAGCACTGGCTATGTGG...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACGAGTGTCCATGGCTGTaGAGCGCAGCTCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNECPWL*SAALGS
Trigger: AGAGCCCAGAGCTGCGCTCCACAGCCATGGACACTC...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACAGAGATCCCTGGCCATaGGGTTGTAGGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNRDPWP*GCRPAP
Trigger: TGGCGCAGGCCTACAACCCCATGGCCAGGGATCTCT...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAGTCAAGTTGCCGAGATaGATCAACTCCCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPVKLPR*INSQEQ
Trigger: TTGCTCTTGGGAGTTGATCCATCTCGGCAACTTGAC...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACACTCTTAGTGTATCCTaGAGGTTGTTGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDTLSVS*RLLPLD
Trigger: GTCAAGAGGCAACAACCTCCAGGATACACTAAGAGT...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTTTGAATGCGAATGATTaGCTGGTTGGGGTCGTATGT +
Preference number: 4 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTLNAND*LVGVVC
Trigger: ACATACGACCCCAACCAGCCAATCATTCGCATTCAA...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTAGAAGGTGGGGACACTaGTGGCCAGCTCACGGAGAA +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLARRWGH*WPAHGE
Trigger: TTCTCCGTGAGCTGGCCATCAGTGTCCCCACCTTCT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATTGTCAAAGAAGGGCTaGACTTGCTGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPLSKKG*TCWKKK
Trigger: CTTCTTCTTCCAGCAAGTTCAGCCCTTCTTTGACAA...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTGTTCCCGCTGCGTGGTaGGAATCAGACAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAVPAAW*ESDRHE
Trigger: TTCGTGCCTGTCTGATTCTCACCACGCAGCGGGAAC...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTGATTGTGCTCTGGATTaGCGTGTTCATGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATDCALD*RVHDPK
Trigger: TTTTGGGTCATGAACACGTCAATCCAGAGCACAATC...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTTACTTCTTCCCCAGTTaGAAGACAAGCGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GGRQTLLAMLAHPANVATYFFPS*KTSEDR
Trigger: TCTGTCTTCGCTTGTCTTTCAACTGGGGAAGAAGTA...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGTATTCACCATTGGAATaGAGATCTGGTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRYSPLE*RSGTSS
Trigger: GGAAGAAGTACCAGATCTTCATTCCAATGGTGAATA...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACTTGGCCCCGCTGGCATaGCGCAGCTTCTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNLAPLA*RSFFFS
Trigger: TGAGAAGAAGAAGCTGCGTCATGCCAGCGGGGCCAA...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTAGCTCCTTGATGTCCTaGTGGATGCCCGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLASSLMS*WMPGPI
Trigger: AATGGGGCCGGGCATCCAGCAGGACATCAAGGAGCT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTGCCACCACCTGCACTaGAGTCTGGCTAACCACGTG +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLACHHLH*SLANHV
Trigger: CACGTGGTTAGCCAGACTGCAGTGCAGGTGGTGGCA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACCCACCACATAGCCAGTaGTGGCCACCAACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNPPHSQ*WPPTVP
Trigger: TGGGACAGTTGGTGGCCAGCACTGGCTATGTGGTGG...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTAAGCCTTGTACCAGCTaGGGTCATGCTCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAKPCTS*GHALWR
Trigger: CCGCCACAGAGCATGACCGCAGCTGGTACAAGGCTT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACCACTCTCACTGTTGCTaGCCTCTGTGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNHSHCC*PLCWWQ
Trigger: CTGCCACCAGCACAGAGGGCAGCAACAGTGAGAGTG...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTCATGCCACATCTCATaGCAGAGGATGGCTACCCGA +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETSCHIS*QRMATR
Trigger: TCGGGTAGCCATCCTCTGGCATGAGATGTGGCATGA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTGGCGGCACTGGCGGTaGCCACGGCAGGACCCGTCC +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLWRHWR*PRQDPS
Trigger: GGACGGGTCCTGCCGTGGCCACCGCCAGTGCCGCCA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGATCTGCCAATTCTGGTaGAATTCCCACCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLICQFW*NSHLPL
Trigger: GAGTGGAAGGTGGGAATTCCACCAGAATTGGCAGAT...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTCCTTGATGTCCTGCTaGATGCCCGGCCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLASLMSC*MPGPIA
Trigger: AGCAATGGGGCCGGGCATCCAGCAGGACATCAAGGA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAAACTGGGTCAGAGAGTaGCCTTCAAATTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPNWVRE*PSNSKL
Trigger: CAGCTTTGAATTTGAAGGCCACTCTCTGACCCAGTT...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAATGAGCTCATCTTGCTaGTCTTCATTCAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPMSSSC*SSFSSD
Trigger: GTCTGAGCTGAATGAAGACCAGCAAGATGAGCTCAT...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCACCTTCCACTCCTATaGGGCTGGCGATGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVHLPLL*GWRWPR
Trigger: TCTTGGCCATCGCCAGCCTCATAGGAGTGGAAGGTG...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCGAAGCGCTGCTCGGATaGTGTCAAGTACACGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVEALLG*CQVHGA
Trigger: TGCCCCGTGTACTTGACATCATCCGAGCAGCGCTTC...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCGCGCAGGGAGGGCGATaGGGAGTCCTTCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSAQGGR*GVLQKL
Trigger: GAGCTTCTGAAGGACTCCTCATCGCCCTCCCTGCGC...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACGTTCTCATGTCCTCATaGGGGCTGACCACAAGGGAC +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNVLMSS*GLTTRD
Trigger: GTCCCTTGTGGTCAGCCCTCATGAGGACATGAGAAC...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTCAGCGAGTTCTTGCTaGTCCTGCACTTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLASASSC*SCTSAP
Trigger: GGGTGCTGAAGTGCAGGAGCAGCAAGAACTCGCTGA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTATGAAGGTGATGGCCTaGACCACCATGGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAMKVMA*TTMVWW
Trigger: CCACCACACCATGGTGGTGCAGGCCATCACCTTCAT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATAGCATGCTGGGCCTGCTaGTGCATGGTCTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIACWAC*CMVCTK
Trigger: CTTTGTGCAGACCATGCAGCAGCAGGCCCAGCATGC...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAGGGTGTGTCAATTCTTaGAATGAGCTGAGGTATAAC +
Preference number: 4 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPGCVNS*NELRYN
Trigger: GTTATACCTCAGCTCATTGCAAGAATTGACACACCC...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACCGTTCCATCATAGCATaGAGGGGCTCCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNRSIIA*RGSSTS
Trigger: TGAGGTGCTGGAGCCCCTGCATGCTATGATGGAACG...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATAGCTCCTTGGCTGCTTTaGCCCTGGTCTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIAPWLL*PWSPHS
Trigger: GGAATGAGGAGACCAGGGCCAAAGCAGCCAAGGAGC...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACAGCGCCTTCCCGGATaGCCTGCTTGGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPQRLPG*PAWGPT
Trigger: TGTGGGACCCCAAGCAGGCCATCCGGGAAGGCGCTG...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGATCTTTCTTCAGCTGTaGAATCTGCCGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETIFLQL*NLPAQV
Trigger: GACCTGAGCCGGCAGATTCCACAGCTGAAGAAAGAT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATACTAACCACGTGGGCATaGCCGCTGATGAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNILTTWA*PLMRWM
Trigger: CATCCACCTCATCAGCGGCCATGCCCACGTGGTTAG...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTCATACCAGGTGGCCTaGATCTCCAGCTCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLASYQVA*ISSSPK
Trigger: CTTCGGAGAGCTGGAGATCCAGGCCACCTGGTATGA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGGGCACATCAGAAGTTTaGGGGACACATACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETGTSEV*GTHTAA
Trigger: AGCTGCAGTATGTGTCCCCCAAACTTCTGATGTGCC...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTCTTGCGAAGAGAAGTaGGGTCATTGGCTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETSCEEK*GHWLGV
Trigger: CACTCCTAGCCAATGACCCCACTTCTCTTCGCAAGA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGCCTCTCATTGGCATCTaGGCTGGAAACCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKPLIGI*AGNQFK
Trigger: TTTGAACTGGTTTCCAGCTCAGATGCCAATGAGAGG...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCTGGTGGACAGAGGGATaGCAGCGTATCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVWWTEG*QRISGC
Trigger: GCATCCAGAGATACGCTGTCATCCCTCTGTCCACCA...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp AGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTGGTAGTTGGCAAATCTaGCAATTCTGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: RITVSRREPCQAQTDVRPGSWQI*QFWWNS
Trigger: GGAATTCCACCAGAATTGGCAGATTTGCCAACTACC...AGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCACATCTGCCACCACCTaGACTGCAGTCTGGCTAACC +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVTSATT*TAVWLT
Trigger: GGTTAGCCAGACTGCAGTGCAGGTGGTGGCAGATGT...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACAGCAGGGAGGAGTCCTaGAGCATGTCCATGATGATG +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNSREES*SMSMMM
Trigger: CATCATCATGGACATGCTGCAGGACTCCTCCCTGCT...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTCTGGCCATGAGCTTATaGAGCTCCTGCTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTLAMSL*SSCLCC
Trigger: GCAGCACAAGCAGGAGCTGCATAAGCTCATGGCCAG...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACTGGCACAGTGGTCCCTaGTTTCTTATGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNWHSGP*FLMGWF
Trigger: GAACCAGCCCATAAGAAAGCAGGGACCACTGTGCCA...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGTTAAGGATTGTCATCTaGATCAGCGAGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLLRIVI*ISEFLL
Trigger: CAGCAAGAACTCGCTGATCCAGATGACAATCCTTAA...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTCAGTGTCGGACGAACTaGGTCAGAGAGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTQCRTN*VREWPS
Trigger: TGAAGGCCACTCTCTGACCCAGTTCGTCCGACACTG...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGCGGATCTCAAAGACCTaGTCATTCAGAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETRISKT*SFRATN
Trigger: GTTTGTGGCTCTGAATGACCAGGTCTTTGAGATCCG...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCGATCACGCCCGGGTTTaGGTCAGGGTCTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVDHARV*VRVWIF
Trigger: AAAGATCCAGACCCTGACCCAAACCCGGGCGTGATC...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCGCATCAAGGCCACCATaGACACAGCGGGGTAGAACT +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVASRPP*TQRGRT
Trigger: AGTTCTACCCCGCTGTGTCCATGGTGGCCTTGATGC...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACACAGAAATTCCCGGATaGCCCCATCACAGACTCGGA +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNTEIPG*PHHRLG
Trigger: TCCGAGTCTGTGATGGGGCCATCCGGGAATTTCTGT...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTGACCCGCAGCATGTGTaGGATCAACTGGGGCAGATA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTDPQHV*DQLGQI
Trigger: TATCTGCCCCAGTTGATCCCACACATGCTGCGGGTC...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATAAAGACAGAGTGTCCATaGCTGTGGAGCGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIKTECP*LWSAAL
Trigger: CAGAGCTGCGCTCCACAGCCATGGACACTCTGTCTT...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGGACTTTATTCACCATTaGAATGAAGATCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRDFIHH*NEDLVL
Trigger: AAGTACCAGATCTTCATTCCAATGGTGAATAAAGTC...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTGCTCCCCAGGCCTTTTaGAGGTTGATGGTGCTGACA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTAPQAF*RLMVLT
Trigger: TGTCAGCACCATCAACCTCCAAAAGGCCTGGGGAGC...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTCAAGTATGGCAGGCGTaGGCCCTTTCTGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTQVWQA*ALSGTP
Trigger: TGGAGTTCCAGAAAGGGCCCACGCCTGCCATACTTG...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTAGCTCGGACAGCATGTaGCAAGAAACCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTSSDSM*QETMAP
Trigger: TGGGGCCATGGTTTCTTGCCACATGCTGTCCGAGCT...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGATGCGAATGATTGGCTaGTTGGGGTCGTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETMRMIG*LGSYVP
Trigger: AGGAACATACGACCCCAACCAGCCAATCATTCGCAT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTGCCGCAGATCTTCATaGCCTTTCAGGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETCRRSS*PFRRKT
Trigger: TGTTTTCCTCCTGAAAGGCCATGAAGATCTGCGGCA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCCACCAAGGCTTCATTaGCATCTGGCCAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVPPRLH*HLASDH
Trigger: ATGGTCACTGGCCAGATGTCAATGAAGCCTTGGTGG...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTCCCCAGCTGTGTTGTTaGCAGCATGCTCAAACACCT +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTPQLCC*QHAQTP
Trigger: AGGTGTTTGAGCATGCTGTCAACAACACAGCTGGGG...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTCCATCAGCCTCCAGTTaGGCAGTGGGTCATAGACAA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTPSASS*AVGHRQ
Trigger: TTGTCTATGACCCACTGCTCAACTGGAGGCTGATGG...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp AGTGTGACTACCACTACATCTGTCCTAAGAAAACACAATATAGTAACAACAGAACCTTCCCGGATGGCCTaGTTGGGGTCCCACACAGCC +
Preference number: 4 (lower is better)
Translates to: SVTTTTSVLRKHNIVTTEPSRMA*LGSHTA
Trigger: GGCTGTGTGGGACCCCAAGCAGGCCATCCGGGAAGG...TTCTGTTGTTACTATATTGTGTTTTCTTAGGACAGATGTAGTGGTAGTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCATTCGGCTGCTGGGGCTaGACAGCCTGGAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPFGCWG*TAWKLV
Trigger: CACCAGTTTCCAGGCTGTGCAGCCCCAGCAGCCGAA...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACCTTCCATCAAGTCTCTaGAACAGCGGCTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNLPSSL*NSGFPP
Trigger: TGGTGGAAAGCCGCTGTTGCAGAGACTTGATGGAAG...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTGGATCAGCGAGTTCTTaGTGCTCCTGCACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTGSASS*CSCTSA
Trigger: TGCTGAAGTGCAGGAGCAGCAAGAACTCGCTGATCC...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTGGGACTGGTCGATCATaGCGATGTTCACTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAGTGRS*RCSLCA
Trigger: AGCACAAAGTGAACATCGGCATGATCGACCAGTCCC...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTTGATGGTGCTGACATaGAGTTTCTTCATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETLMVLT*SFFMGP
Trigger: AGGACCCATGAAGAAACTGCATGTCAGCACCATCAA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGCTGATGAGCTCATCTTaGTGGTCTTCATTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETLMSSS*WSSFSS
Trigger: TGAGCTGAATGAAGACCAGCAAGATGAGCTCATCAG...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTGCTGCTGCATGGTCTaGACAAAGTGTTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLACCCMV*TKCCMC
Trigger: GCACATGCAACACTTTGTGCAGACCATGCAGCAGCA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACATCACTCGTTCATCCTaGCGCAGATCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNITRSS*RRSSWP
Trigger: AGGCCATGAAGATCTGCGGCAGGATGAACGAGTGAT...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGCAAATCTGCCAATTCTaGTGGAATTCCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKQICQF*WNSHLP
Trigger: TGGAAGGTGGGAATTCCACCAGAATTGGCAGATTTG...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CCA 90 bp CAACAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGGTTTCGAAGGTAGTTaGCAAATCTGCCAATTCTGG +
Preference number: 4 (lower is better)
Translates to: QQNHSEQERAVPSSNRCKGFEGS*QICQFW
Trigger: CCAGAATTGGCAGATTTGCCAACTACCTTCGAAACC...CTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCATGGGGCTGCACAGCCTaGAAACTGGTGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPWGCTA*KLVKGV
Trigger: CACGCCCTTCACCAGTTTCCAGGCTGTGCAGCCCCA...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCACACAGCTCAGGACATaGTTCATGGTGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVTQLRT*FMVSWR
Trigger: CCTCCAGGACACCATGAACCATGTCCTGAGCTGTGT...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGTTTGGGTCAGGGTCTaGATCTTTCAGTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLVWVRV*IFQFQN
Trigger: ATTTTGAAACTGAAAGATCCAGACCCTGACCCAAAC...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACGAGACGATTCGGCCTTaGCTGTTGTCATGCATGAAG +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNETIRP*LLSCMK
Trigger: CTTCATGCATGACAACAGCCAAGGCCGAATCGTCTC...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTCCTCCAGTTGAGCAGTaGGTCATAGACAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAPPVEQ*VIDKGF
Trigger: GAAGCCTTTGTCTATGACCCACTGCTCAACTGGAGG...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGATAAGCAGCTCCACTTaGGTTGGAACATCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETISSST*VGTSKV
Trigger: CACTTTGGATGTTCCAACCCAAGTGGAGCTGCTTAT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTACCCACTGGCACACCTaGTCAAATTTCTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLATHWHT*SNFSSI
Trigger: GATGGAAGAGAAATTTGATCAGGTGTGCCAGTGGGT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATAAAGGAGAAGAGATCCTaGTGTAGAGCCAACACTGCC +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIKEKRS*CRANTA
Trigger: GGCAGTGTTGGCTCTACATCAGGATCTCTTCTCCTT...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATATGGATAAATCCTCAGTaGCCTTCTTCTGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIWINPQ*PSSAEG
Trigger: CCCCTCTGCAGAAGAAGGTCACTGAGGATTTATCCA...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCTGGATTGAATGCGAATaGTTGGCTGGTTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVWIECE*LAGWGR
Trigger: ACGACCCCAACCAGCCAATCATTCGCATTCAATCCA...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCGAGCCATCCGCAGCATaGTGCGATGCTCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSEPSAA*CDARCS
Trigger: TGAACATCGAGCATCGCATCATGCTGCGGATGGCTC...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCTGGCAGAGGTTCTCGTaGGATGTTGCCTGCTTGATA +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVWQRFS*DVACLI
Trigger: TATCAAGCAGGCAACATCTCACGAGAACCTCTGCCA...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTCTCACCATCATGGCCTaGTGGACCAGCGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LVERTNWIILSAMFMMSFLTIMA*WTSVLL
Trigger: CAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAG...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATATCCCCAAAGTCAATGTaGAGGATCTTCCCACTCAGC +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNISPKSM*RIFPLS
Trigger: GCTGAGTGGGAAGATCCTGCACATTGACTTTGGGGA...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTGGCTTTCCACCAGAGTaGACTTGGCAGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLGFPPE*TWQGWG
Trigger: CCCCCAGCCCTGCCAAGTCCACTCTGGTGGAAAGCC...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTTGGTTCATGGTGTCCTaGAGGTACTGGGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTWFMVS*RYWVSV
Trigger: CACAGATACCCAGTACCTCCAGGACACCATGAACCA...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTAAGCCACCTGCCTTTTaGCCAGCAGGGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LVERTNWIILSAMFMMSFKPPAF*PAGRSP
Trigger: AGGACTCCTCCCTGCTGGCCAAAAGGCAGGTGGCTT...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCGTTTCCTTCAGAGTCTaGGGACCCCGTTCCATCATA +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVVSFRV*GPRSII
Trigger: TATGATGGAACGGGGTCCCCAGACTCTGAAGGAAAC...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCTGGATTCTGGCACAGTaGTCCCTGCTTTCTTATGGG +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVWILAQ*SLLSYG
Trigger: CCCATAAGAAAGCAGGGACCACTGTGCCAGAATCCA...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTCTCCAATGAATGAATaGATGGATTCTGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETSPMNE*MDSGTV
Trigger: CACTGTGCCAGAATCCATCCATTCATTCATTGGAGA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACCAGCTCCACTTGGGTTaGAACATCCAAAGTGTCATC +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNQLHLG*NIQSVI
Trigger: GATGACACTTTGGATGTTCCAACCCAAGTGGAGCTG...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACGAGTAGACTCCTCCTaGCTCATCTCTCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPRVDSS*LISRSS
Trigger: GGAGCTTCGAGAGATGAGTCAGGAGGAGTCTACTCG...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTTCGAAGGGCAAGAGTaGTGCTGGCCACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLFEGQE*CWPRRW
Trigger: CCAGCGACGTGGCCAGCATCACTCTTGCCCTTCGAA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTTCAGGAGGGTTTGTGTaGCTTCAGCAATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTSGGFV*LQQCLE
Trigger: CTCAAGACATTGCTGAAGTCACACAAACCCTCCTGA...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTTGTCACTGTGTTCCATaGACTCAGCCAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTCHCVP*TQPSSG
Trigger: TCCTGAACTTGGCTGAGTTCATGGAACACAGTGACA...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTAACACTAAGGTTTTATaGGCAAGAGCCAGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLANTKVL*ARASLP
Trigger: TGGCAGACTGGCTCTTGCTCATAAAACCTTAGTGTT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACTTCCAGCACAGCCATaGCACTGTCCTTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPLPAQP*HCPCVP
Trigger: GGGAACACAAGGACAGTGTCATGGCTGTGCTGGAAG...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp AGTGTGACTACCACTACATCTGTCCTAAGAAAACACAATATAGTAACAACAGAACTGGAGCTCCTTGGCTaGTTTGGCCCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVTTTTSVLRKHNIVTTELELLG*FGPGLL
Trigger: GAGGAGACCAGGGCCAAAGCAGCCAAGGAGCTCCAG...TTCTGTTGTTACTATATTGTGTTTTCTTAGGACAGATGTAGTGGTAGTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR GCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTGGTAGTTGGCAAATCTaGCAATTCTGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAGSWQI*QFWWNS
Trigger: GGAATTCCACCAGAATTGGCAGATTTGCCAACTACC...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACCTGCACGGTTTTCTaGCTCTTGTGGGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSTCTVF*LLWAKS
Trigger: GGACTTTGCCCACAAGAGGCAGAAAACCGTGCAGGT...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGCTTCCGAGGCCTCTaGTTGGATGTGATGACTTGC +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSSFRGL*LDVMTC
Trigger: GCAAGTCATCACATCCAAGCAGAGGCCTCGGAAGCT...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTTCATACCCTTCTCTTTaGCCAGGGTCTCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: TRISQLPIFCSPKIQGLASYPSL*PGSHQN
Trigger: GTTTTGATGAGACCCTGGCCAAAGAGAAGGGTATGA...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCATGCACCAGCTGCTGCTaGGTGATCTCCTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPCTSCC*VISSIS
Trigger: AGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCA...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTCATGCAGTTTCTTCATaGGTCCTGTCTCAACTGGTC +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTHAVSS*VLSQLV
Trigger: GACCAGTTGAGACAGGACCCATGAAGAAACTGCATG...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGGGGTCGTATGTTCCTaGCACAGCCAACTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPGVVCS*HSQLKV
Trigger: GACCTTGAGTTGGCTGTGCCAGGAACATACGACCCC...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTGTCCCTGCTTTCTTATaGGCTGGTTCTCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTVPAFL*AGSPSS
Trigger: AGAACTTGGAGAACCAGCCCATAAGAAAGCAGGGAC...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CAA 72 bp CAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTaGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QLPIFCSPKIQG*ASEGLLCFTVL
Trigger: CAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AGTGTGACTACCACTACATCTGTCCTAAGAAAACACAATATAGTAACAACAGAAAGAAGGTGGGGACACTaGTGGCCAGCTCACGGAGAA +
Preference number: 4 (lower is better)
Translates to: SVTTTTSVLRKHNIVTTERRWGH*WPAHGE
Trigger: TTCTCCGTGAGCTGGCCATCAGTGTCCCCACCTTCT...TTCTGTTGTTACTATATTGTGTTTTCTTAGGACAGATGTAGTGGTAGTCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTATCGCTGTTCAGGAAGTaGTCTGCGCAGTGTCGGACG +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALSLFRK*SAQCRT
Trigger: CGTCCGACACTGCGCAGATCACTTCCTGAACAGCGA...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTACCACAAGCAGCTTGCTaGGCACATCTGCCACCACCT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALPQAAC*AHLPPP
Trigger: AGGTGGTGGCAGATGTGCTCAGCAAGCTGCTTGTGG...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTGCGCAGGAAAGGCATaGCGAAGGCTGGGTTCATGC +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLCAGKA*RRLGSC
Trigger: GCATGAACCCAGCCTTCGTCATGCCTTTCCTGCGCA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGAACGGAAGAAGCCTTaGACAGCAGGGACAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPERKKP*TAGTVY
Trigger: GTACACTGTCCCTGCTGTTCAAGGCTTCTTCCGTTC...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATACCAAACCGTCTCCAATaGATGAATGGATGGATTCTG +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIPNRLQ*MNGWIL
Trigger: CAGAATCCATCCATTCATTCATTGGAGACGGTTTGG...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTATGCGAGCAGCTTCCATaGGGATCTCCTTGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALCEQLP*GSPCAR
Trigger: GCGAGCACAAGGAGATCCGCATGGAAGCTGCTCGCA...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCGAAGGCTGGGTTCATaGTGCTTAGTCGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLRRLGS*CLVGPQ
Trigger: CTGTGGGCCGACTAAGCAGCATGAACCCAGCCTTCG...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACCTTGGCTGTTGTCATaGATGAAGACCCGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPPWLLS*MKTRSM
Trigger: CATGCTGCGGGTCTTCATGCATGACAACAGCCAAGG...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTATGGCATGCTGGGCCTaGTGCTGCATGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLMACWA*CCMVCT
Trigger: TGTGCAGACCATGCAGCAGCAGGCCCAGCATGCCAT...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAGGCTGCAGTGGTGGCTaGAGTGGTGGCATTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALGCSGG*SGGIGD
Trigger: ATCACCAATGCCACCACTGCAGCCACCACTGCAGCC...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTTCTTCCAGGCCTTCATaGCACATCTCATGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LVERTNWIILSAMFMMSFSSRPS*HISCQR
Trigger: CCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGA...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTCCAGCACCTCAAACATaGCTTTCACGTTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVERTNWIILSAMFMMSFPAPQT*LSRSSP
Trigger: GGGAGAGGAACGTGAAAGGCATGTTTGAGGTGCTGG...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCCGCAGCATGATGCGATaGTCGATGTTCAACAGGATC +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSRSMMR*SMFNRI
Trigger: GATCCTGTTGAACATCGAGCATCGCATCATGCTGCG...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCGTGTTGTTGACAGCATaGTCAAACACCTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVVLLTA*SNTSTF
Trigger: GAAGGTAGAGGTGTTTGAGCATGCTGTCAACAACAC...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTTCAGGACATGGTTCATaGTGTCCTGGAGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: LVERTNWIILSAMFMMSFSGHGS*CPGGTG
Trigger: CCCAGTACCTCCAGGACACCATGAACCATGTCCTGA...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCGCACTTCAAGCAAAGTaGGGTACTTCCTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSALQAK*GTSCRA
Trigger: AGCCCTACAGGAAGTACCCCACTTTGCTTGAAGTGC...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACAGAATGATTGTGCTCTaGATTGACGTGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNRMIVL*IDVFMT
Trigger: GGTCATGAACACGTCAATCCAGAGCACAATCATTCT...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTACCTTGGAGACCCTTCTaGCAGCTCCCCAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALPWRPF*QLPRPF
Trigger: AAAAGGCCTGGGGAGCTGCCAGAAGGGTCTCCAAGG...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTACATATGCCCGGCACTTaGCAGCTCTCTCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALHMPGT*QLSHPG
Trigger: TCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATG...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGCTGCCTCAGGCTGCTaGAGCTTGTTGTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPAASGC*SLLLML
Trigger: CAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGC...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGGTCCAGCATCAGATTaGATGGGTGCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPGPASD*MGACLQ
Trigger: TTGGAGACAGGCACCCATCCAATCTGATGCTGGACC...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCTCACGGTGTGGCATGTaGTTCTGTAGTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSSRCGM*FCSCHP
Trigger: TGGATGGCAACTACAGAACCACATGCCACACCGTGA...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTACCGCTTATTGCCTTTaGTATTTGTGTCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTTAYCL*YLCPSA
Trigger: GGCTGATGGACACAAATACCAAAGGCAATAAGCGGT...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATATGCTTTCTTATGGGCTaGTTCTCCAAGTTCTACACC +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNICFLMG*FSKFYT
Trigger: GGTGTAGAACTTGGAGAACCAGCCCATAAGAAAGCA...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp AGTGTGACTACCACTACATCTGTCCTAAGAAAACACAATATAGTAACAACAGAACGAGTAGACTCCTCCTaGCTCATCTCTCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVTTTTSVLRKHNIVTTERVDSS*LISRSS
Trigger: GGAGCTTCGAGAGATGAGTCAGGAGGAGTCTACTCG...TTCTGTTGTTACTATATTGTGTTTTCTTAGGACAGATGTAGTGGTAGTCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTACAAGGGACCGGACCATaGGGATTTTCTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALQGTGP*GFSASP
Trigger: AGGACTGGCAGAAAATCCTCATGGTCCGGTCCCTTG...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCGAGGTTGTTGCCTCTTaGCAAGGAGATAGAACGGAA +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSEVVAS*QGDRTE
Trigger: TTCCGTTCTATCTCCTTGTCAAGAGGCAACAACCTC...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAAGCATGCGGGCGCTCTaGTCCTTGATTCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALSMRAL*SLILPM
Trigger: CATTGGGAGAATCAAGGAGCAGAGCGCCCGCATGCT...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTACACCCAGGAGCACGATaGCATTGTCATCTCTCAGCG +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALHPGAR*HCHLSA
Trigger: CGCTGAGAGATGACAATGGCATCGTGCTCCTGGGTG...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACAAGATCTTGTTGGCTaGATTGTGACGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPQDLVG*IVTGCG
Trigger: ACCACAGCCCGTCACAATGCAGCCAACAAGATCTTG...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTGCGGTTGGCAGAGGATaGTCAAGTTGCCGAGATGGA +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLAVGRG*SSCRDG
Trigger: TCCATCTCGGCAACTTGACCATCCTCTGCCAACCGC...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATAGGCTTCATTGACATCTaGCCAGTGACCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIGFIDI*PVTIIK
Trigger: TTTGATTATGGTCACTGGCCAGATGTCAATGAAGCC...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCTCTTCAAGATCTTGTTaGCTGCATTGTGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSSSRSC*LHCDGL
Trigger: CAGCCCGTCACAATGCAGCCAACAAGATCTTGAAGA...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAACCATCATGGCCTGCTaGACCAGCGTGTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALTIMAC*TSVLLC
Trigger: ACACAGCAACACGCTGGTCCAGCAGGCCATGATGGT...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGGGAGCGGGTATAGTTaGTTCTTCGGTCAAACCACA +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPGSGYS*FFGQTT
Trigger: TGTGGTTTGACCGAAGAACCAACTATACCCGCTCCC...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
3UTR CAA 72 bp GTTTCTGACAGTGTCTTTTCAACAGCAGCTAGGAGGTaGGCGGAAGCCAACTTTGAATATACAGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: VSDSVFSTAARR*AEANFEYTVVL
Trigger: AAGAACTACTGTATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGTCAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAACAGGCTTGCGTACTTaGGCCAGGTTCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALTGLRT*ARFSCP
Trigger: AGGACATGAGAACCTGGCTCAAGTACGCAAGCCTGT...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAGAAAACACCTGGCCATaGGCTTATGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALENTWP*AYAAPA
Trigger: AGCAGGAGCTGCATAAGCTCATGGCCAGGTGTTTTC...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTACCGTCTCCAATGAATaGATGGATGGATTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LVERTNWIILSAMFMMSFTVSNE*MDGFWH
Trigger: GTGCCAGAATCCATCCATTCATTCATTGGAGACGGT...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCATCCAAAGTGTCATCATaGGAGAAATCCCGACCAGTG +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPSKVSS*EKSRPV
Trigger: CACTGGTCGGGATTTCTCTCATGATGACACTTTGGA...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCCTTCAAATTCAAAGCTaGCAAGGGTTCGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSLQIQS*QGFEGQ
Trigger: TTGCCCTTCGAACCCTTGGCAGCTTTGAATTTGAAG...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAAGCTCTGTCAGGATCTaGATGAGCATCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALSSVRI*MSILRR
Trigger: CCTGCGCAAGATGCTCATCCAGATCCTGACAGAGCT...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTGGCCCACCAAGGGTCTaGGTGTGTCAATTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLGPPRV*VCQFLQ
Trigger: TTGCAAGAATTGACACACCCAGACCCTTGGTGGGCC...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR TCA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAACTTCAGCAATGTCTTaGGAAGTGAGAGCCAACTCA +
Preference number: 4 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPTSAMS*EVRANS
Trigger: TGAGTTGGCTCTCACTTCTCAAGACATTGCTGAAGT...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAGGTCAGGATCTGTTATaGCAACCACAAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALGQDLL*QPQAAC
Trigger: GCAAGCTGCTTGTGGTTGGCATAACAGATCCTGACC...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTGTCTGCACAAAGTGTTaGATGTGCTGGAAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLVCTKC*MCWKAS
Trigger: TGACGCCTTCCAGCACATGCAACACTTTGTGCAGAC...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTTGTCAATGCACTGCTaGGCCAAGGAGAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLLSMHC*AKEKRS
Trigger: GGATCTCTTCTCCTTGGCCCAGCAGTGCATTGACAA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTATCTCATGCCAGAGGATaGCTACCCGAATCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALSHARG*LPESAL
Trigger: AAGAGCTGATTCGGGTAGCCATCCTCTGGCATGAGA...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTTCTTTGTAGTGCAGTaGTTTGGCATATGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLFFVVQ*FGICPA
Trigger: TGCCGGGCATATGCCAAAGCACTGCACTACAAAGAA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CCA 90 bp AGTGTGACTACCACTACATCTGTCCTAAGAAAACACAATATAGTAACAACAGAAATCTGCCAATTCTGGTaGAATTCCCACCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: SVTTTTSVLRKHNIVTTEICQFW*NSHLPL
Trigger: GAGTGGAAGGTGGGAATTCCACCAGAATTGGCAGAT...TTCTGTTGTTACTATATTGTGTTTTCTTAGGACAGATGTAGTGGTAGTCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp AGTGTGACTACCACTACATCTGTCCTAAGAAAACACAATATAGTAACAACAGAATTGTCAAAGAAGGGCTaGACTTGCTGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SVTTTTSVLRKHNIVTTELSKKG*TCWKKK
Trigger: CTTCTTCTTCCAGCAAGTTCAGCCCTTCTTTGACAA...TTCTGTTGTTACTATATTGTGTTTTCTTAGGACAGATGTAGTGGTAGTCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR TCA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCAATGTCTTGAGAAGTaGGAGCCAACTCAATACTCC +
Preference number: 4 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLQCLEK*EPTQYS
Trigger: GGAGTATTGAGTTGGCTCTCACTTCTCAAGACATTG...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR GCA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAATCAAAACCTTTCTCTaGTTCTTCAAATGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALIKTFL*FFKCVP
Trigger: CGGCACACATTTGAAGAAGCAGAGAAAGGTTTTGAT...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GCCCTGGTCTCCTCATTCCGGCTCTTCAGTCCACTGGCGAACTGCTaGAGGACGCTCACGTTGCTAGATGTGGCGGCACTGGCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: ALVSSFRLFSPLANC*RTLTLLDVAALAVA
Trigger: GGCCACCGCCAGTGCCGCCACATCTAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACTGAAGAGCCGGAATGAGGAGACCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 90 bp GAGCTGTACCCCAGCAGTCCCACCAAGGCGTTCGGCTGCTGGGGCTaGACAGCCTGGAAACTGGTGAAGGGCGTGATGTGCCGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ELYPSSPTKAFGCWG*TAWKLVKGVMCRGL
Trigger: CAAGCCTCGGCACATCACGCCCTTCACCAGTTTCCAGGCTGTGCAGCCCCAGCAGCCGAACGCCTTGGTGGGACTGCTGGGGTACAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GCTCAGGTCATAGAGCACAGCAGTGAGCGCGGGGCTCAGGCCCACTaGCAACATGGGCTCCAGCAGCTCCTTGATGTCCTGCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: AQVIEHSSERGAQAH*QHGLQQLLDVLLDA
Trigger: GGCATCCAGCAGGACATCAAGGAGCTGCTGGAGCCCATGTTGGCAGTGGGCCTGAGCCCCGCGCTCACTGCTGTGCTCTATGACCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TTGGCCCTGGTCTCCTCATTCCGGCTCTTCAGTCCACTGGCGAACTaGTGCAGGACGCTCACGTTGCTAGATGTGGCGGCACTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LALVSSFRLFSPLAN*CRTLTLLDVAALAV
Trigger: CACCGCCAGTGCCGCCACATCTAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACTGAAGAGCCGGAATGAGGAGACCAGGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 90 bp GGGCTCCAGCAGCTCCTTGATGTCCTGCTGGATGCCCGGCCCCATTaGTCGTGCCAACATGCTGATGCACGTGAATACGGTGGCATCCAC +
Preference number: 5 (lower is better)
Translates to: GLQQLLDVLLDARPH*SCQHADAREYGGIH
Trigger: GTGGATGCCACCGTATTCACGTGCATCAGCATGTTGGCACGAGCAATGGGGCCGGGCATCCAGCAGGACATCAAGGAGCTGCTGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CCCATAGGCTCGGCTGTAGCTCTCTCCTGCCATGGCAGTCAGCTCTaGATCCAGCAGGTCCCTGGCCTTGTCAATGCACTGCTGGGCCAA +
Preference number: 5 (lower is better)
Translates to: PIGSAVALSCHGSQL*IQQVPGLVNALLGQ
Trigger: TTGGCCCAGCAGTGCATTGACAAGGCCAGGGACCTGCTGGATGCAGAGCTGACTGCCATGGCAGGAGAGAGCTACAGCCGAGCCTATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGGCATATGCCCGGCACTaGGCAGCTCTCTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRAYARH*AALSPR
Trigger: CCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGC...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp CCCCTGCCATCGCCAGGCGGCCAATGGCCTTGGACGCCATTTCCATaGCAACTGGATCGCTTGAGGGGAGGAGGTTTCGAAGGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: PLPSPGGQWPWTPFP*QLDRLRGGGFEGSW
Trigger: CCAACTACCTTCGAAACCTCCTCCCCTCAAGCGATCCAGTTGTCATGGAAATGGCGTCCAAGGCCATTGGCCGCCTGGCGATGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS TCA 90 bp GGTACCACTGAGGCTTCTGCATTTCCTTTGGTTCCCGCTGCGTGGTaGGAATCAGACAGGCACGAAGGGCCGCTACAGCGCCTTCCCGGA +
Preference number: 5 (lower is better)
Translates to: GTTEASAFPLVPAAW*ESDRHEGPLQRLPG
Trigger: TCCGGGAAGGCGCTGTAGCGGCCCTTCGTGCCTGTCTGATTCTCACCACGCAGCGGGAACCAAAGGAAATGCAGAAGCCTCAGTGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 90 bp CAGCAGCTCCTTGATGTCCTGCTGGATGCCCGGCCCCATTGCTCGTaGCAACATGCTGATGCACGTGAATACGGTGGCATCCACCTGCAC +
Preference number: 5 (lower is better)
Translates to: QQLLDVLLDARPHCS*QHADAREYGGIHLH
Trigger: GTGCAGGTGGATGCCACCGTATTCACGTGCATCAGCATGTTGGCACGAGCAATGGGGCCGGGCATCCAGCAGGACATCAAGGAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TGGCATATGCCCGGCACTTGGCAGCTCTCTCACCCAGGAGCACGATaGCATTGTCATCTCTCAGCGGCAGGGGGCCCTTGTCACTGTGTT +
Preference number: 5 (lower is better)
Translates to: WHMPGTWQLSHPGAR*HCHLSAAGGPCHCV
Trigger: AACACAGTGACAAGGGCCCCCTGCCGCTGAGAGATGACAATGGCATCGTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TCCTGCTTGTGCTGCTGGTCCTCTGTGGCGATGGCATGCTGGGCCTaGTGCTGCATGGTCTGCACAAAGTGTTGCATGTGCTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SCLCCWSSVAMACWA*CCMVCTKCCMCWKA
Trigger: CGCCTTCCAGCACATGCAACACTTTGTGCAGACCATGCAGCAGCAGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GGACCCATCTCTCACCCGGTACCACTGAGGCTTCTGCATTTCCTTTaGTTCCCGCTGCGTGGTGAGAATCAGACAGGCACGAAGGGCCGC +
Preference number: 5 (lower is better)
Translates to: GPISHPVPLRLLHFL*FPLRGENQTGTKGR
Trigger: GCGGCCCTTCGTGCCTGTCTGATTCTCACCACGCAGCGGGAACCAAAGGAAATGCAGAAGCCTCAGTGGTACCGGGTGAGAGATGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS CCA 90 bp GCCAGCTGCAGCTCTCCAGGCCAAAGTGCTTCGCTAGTGGCTGCGTaGACCCATCTCTCACCCGGTACCACTGAGGCTTCTGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: ASCSSPGQSASLVAA*THLSPGTTEASAFP
Trigger: AGGAAATGCAGAAGCCTCAGTGGTACCGGGTGAGAGATGGGTCCACGCAGCCACTAGCGAAGCACTTTGGCCTGGAGAGCTGCAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS CCA 90 bp CTTCCATCAAGTCTCTGCAACAGCGGCTTTCCACCAGAGTGGACTTaGCAGGGCTGGGGGACGTCCCAAATCCCATCAGGCCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: LPSSLCNSGFPPEWT*QGWGTSQIPSGLEG
Trigger: CCCCTCAAGGCCTGATGGGATTTGGGACGTCCCCCAGCCCTGCCAAGTCCACTCTGGTGGAAAGCCGCTGTTGCAGAGACTTGATGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp TGCAGCTCCTGCTTGTGCTGCTGGTCCTCTGTGGCGATGGCATGCTaGGCCTGCTGCTGCATGGTCTGCACAAAGTGTTGCATGTGCTGG +
Preference number: 5 (lower is better)
Translates to: CSSCLCCWSSVAMAC*ACCCMVCTKCCMCW
Trigger: CCAGCACATGCAACACTTTGTGCAGACCATGCAGCAGCAGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTTCCCGGATGGCCTGCTaGGGGTCCCACACAGCCACA +
Preference number: 5 (lower is better)
Translates to: GGRQTLLAMLAHPANVATSRMAC*GSHTAT
Trigger: TGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGGA...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTTCCACCAGAGTGGACTaGGCAGGGCTGGGGGACGTC +
Preference number: 5 (lower is better)
Translates to: GGRQTLLAMLAHPANVATSTRVD*AGLGDV
Trigger: GACGTCCCCCAGCCCTGCCAAGTCCACTCTGGTGGA...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CATCTCTCGAAGCTCCATGGTGACGTAGTGCTGGAGCTCCTTGGCTaGTTTGGCCCTGGTCTCCTCATTCCGGCTCTTCAGTCCACTGGC +
Preference number: 5 (lower is better)
Translates to: HLSKLHGDVVLELLG*FGPGLLIPALQSTG
Trigger: GCCAGTGGACTGAAGAGCCGGAATGAGGAGACCAGGGCCAAAGCAGCCAAGGAGCTCCAGCACTACGTCACCATGGAGCTTCGAGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 90 bp GGTGTCCTGGAGGTACTGGGTATCTGTGAAGGCGGACGGTCGGAATaGAGCCAGGCGGGGCAGCAGGTTAAGGATTGTCATCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: GVLEVLGICEGGRSE*SQAGQQVKDCHLDQ
Trigger: CTGATCCAGATGACAATCCTTAACCTGCTGCCCCGCCTGGCTGCATTCCGACCGTCCGCCTTCACAGATACCCAGTACCTCCAGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GGCAGGCGTGGGCCCTTTCTGGAACTCCAGTTCTTTGTAGTGCAGTaGTTTGGCATATGCCCGGCACTTGGCAGCTCTCTCACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GRRGPFLELQFFVVQ*FGICPALGSSLTQE
Trigger: CTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAGAACTGGAGTTCCAGAAAGGGCCCACGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GACAGGCACGAAGGGCCGCTACAGCGCCTTCCCGGATGGCCTGCTTaGGGTCCCACACAGCCACAAAAATGTTGTCAAAGAAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: DRHEGPLQRLPGWPA*GPTQPQKCCQRRAE
Trigger: TTCAGCCCTTCTTTGACAACATTTTTGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGGAAGGCGCTGTAGCGGCCCTTCGTGCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS CCA 90 bp GGTCGGAATGCAGCCAGGCGGGGCAGCAGGTTAAGGATTGTCATCTaGATCAGCGAGTTCTTGCTGCTCCTGCACTTCAGCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: GRNAARRGSRLRIVI*ISEFLLLLHFSTHW
Trigger: CCAGTGGGTGCTGAAGTGCAGGAGCAGCAAGAACTCGCTGATCCAGATGACAATCCTTAACCTGCTGCCCCGCCTGGCTGCATTCCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp AAGAAACCATGGCCCCATAGGCTCGGCTGTAGCTCTCTCCTGCCATaGCAGTCAGCTCTGCATCCAGCAGGTCCCTGGCCTTGTCAATGC +
Preference number: 5 (lower is better)
Translates to: KKPWPHRLGCSSLLP*QSALHPAGPWPCQC
Trigger: GCATTGACAAGGCCAGGGACCTGCTGGATGCAGAGCTGACTGCCATGGCAGGAGAGAGCTACAGCCGAGCCTATGGGGCCATGGTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp CTGCCCATGCATGCCAAGCCTTGTACCAGCTGCGGTCATGCTCTGTaGCGGCACTGTAGTACTGTAGCACCTTGGGGATGGTGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: LPMHAKPCTSCGHAL*RHCSTVAPWGWCSR
Trigger: ACGAGAGCACCATCCCCAAGGTGCTACAGTACTACAGTGCCGCCACAGAGCATGACCGCAGCTGGTACAAGGCTTGGCATGCATGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp TGTCAAAGAAGGGCTGAACTTGCTGGAAGAAGAAGGTGGGGACACTaGTGGCCAGCTCACGGAGAACGAGGACAGCGGCATGTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: CQRRAELAGRRRWGH*WPAHGERGQRHVSG
Trigger: GCCGGAGACATGCCGCTGTCCTCGTTCTCCGTGAGCTGGCCATCAGTGTCCCCACCTTCTTCTTCCAGCAAGTTCAGCCCTTCTTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 90 bp GTCAGGATCTGTTATGCCAACCACAAGCAGCTTGCTGAGCACATCTaGCACCACCTGCACTGCAGTCTGGCTAACCACGTGGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: VRICYANHKQLAEHI*HHLHCSLANHVGMA
Trigger: GGCCATGCCCACGTGGTTAGCCAGACTGCAGTGCAGGTGGTGGCAGATGTGCTCAGCAAGCTGCTTGTGGTTGGCATAACAGATCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CAAGCAAAGTGGGGTACTTCCTGTAGGGCTCCACCACATAGCCAGTaGTGGCCACCAACTGTCCCAGGGTCCACAAAGCCACCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: QAKWGTSCRAPPHSQ*WPPTVPGSTKPPAF
Trigger: AAAGGCAGGTGGCTTTGTGGACCCTGGGACAGTTGGTGGCCAGCACTGGCTATGTGGTGGAGCCCTACAGGAAGTACCCCACTTTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp ACACTGCCCTGTAAAAGGCTCCATCGTGGGTGTCCCGTGGGATCATaGAGGTGTACTCCTCCATGCTGTCCCACTGACCTAAACCCCACG +
Preference number: 5 (lower is better)
Translates to: TLPCKRLHRGCPVGS*RCTPPCCPTDLNPT
Trigger: CGTGGGGTTTAGGTCAGTGGGACAGCATGGAGGAGTACACCTGCATGATCCCACGGGACACCCACGATGGAGCCTTTTACAGGGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TTATGCAGCTCCTGCTTGTGCTGCTGGTCCTCTGTGGCGATGGCATaGTGGGCCTGCTGCTGCATGGTCTGCACAAAGTGTTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: LCSSCLCCWSSVAMA*WACCCMVCTKCCMC
Trigger: GCACATGCAACACTTTGTGCAGACCATGCAGCAGCAGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TCCCCAAGTTTCAGAAAACACCTGGCCATGAGCTTATGCAGCTCCTaGTTGTGCTGCTGGTCCTCTGTGGCGATGGCATGCTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SPSFRKHLAMSLCSS*LCCWSSVAMACWAC
Trigger: GCAGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCATAAGCTCATGGCCAGGTGTTTTCTGAAACTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GGTGAGAGAGGGATTGATCTCGGAAGATCCGCATCAAGGCCACCATaGACACAGCGGGGTAGAACTCGTCCAGGGGCAGGTTTCCCATGT +
Preference number: 5 (lower is better)
Translates to: GERGIDLGRSASRPP*TQRGRTRPGAGFPC
Trigger: ACATGGGAAACCTGCCCCTGGACGAGTTCTACCCCGCTGTGTCCATGGTGGCCTTGATGCGGATCTTCCGAGATCAATCCCTCTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GCGTGGGCCCTTTCTGGAACTCCAGTTCTTTGTAGTGCAGTGCTTTaGCATATGCCCGGCACTTGGCAGCTCTCTCACCCAGGAGCACGA +
Preference number: 5 (lower is better)
Translates to: AWALSGTPVLCSAVL*HMPGTWQLSHPGAR
Trigger: TCGTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAGAACTGGAGTTCCAGAAAGGGCCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp AGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTTCCCGGATGGCCTGCTaGGGGTCCCACACAGCCACA +
Preference number: 5 (lower is better)
Translates to: RITVSRREPCQAQTDVRPSRMAC*GSHTAT
Trigger: TGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGGA...AGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CAA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAAAAGCCACCTGCCTTTaGGCCAGCAGGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPKATCL*ASREES
Trigger: GGACTCCTCCCTGCTGGCCAAAAGGCAGGTGGCTTT...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGTTGAGCCCCAGGGACTaGAAGATGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRLSPRD*KMKVMA
Trigger: GGCCATCACCTTCATCTTCAAGTCCCTGGGGCTCAA...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAAGCGGCAGGGGGCCCTaGTCACTGTGTTCCATGAAC +
Preference number: 5 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPSGRGP*SLCSMN
Trigger: GTTCATGGAACACAGTGACAAGGGCCCCCTGCCGCT...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGCACAGGCTTGCGTACTaGAGCCAGGTTCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRHRLAY*SQVLMS
Trigger: GGACATGAGAACCTGGCTCAAGTACGCAAGCCTGTG...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CCGAAGCCCATGAGGTCTTTGCAGTACTTGTCATGCACCAGCTGCTaGTGGGTGATCTCCTCCATCTCTTCTCTCAGACGCTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PKPMRSLQYLSCTSC*WVISSISSLRRSPS
Trigger: GGAGGGAGAGCGTCTGAGAGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCATGGGCTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GTCCCGAAGCCCATGAGGTCTTTGCAGTACTTGTCATGCACCAGCTaGTGCTGGGTGATCTCCTCCATCTCTTCTCTCAGACGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: VPKPMRSLQYLSCTS*CWVISSISSLRRSP
Trigger: GGGAGAGCGTCTGAGAGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCATGGGCTTCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GCACCCACTGGCACACCTGATCAAATTTCTCTTCCATCAAGTCTCTaGAACAGCGGCTTTCCACCAGAGTGGACTTGGCAGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: APTGTPDQISLPSSL*NSGFPPEWTWQGWG
Trigger: CCCCCAGCCCTGCCAAGTCCACTCTGGTGGAAAGCCGCTGTTGCAGAGACTTGATGGAAGAGAAATTTGATCAGGTGTGCCAGTGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GTTTTCTGCCTGGGCCAGGTGGGCATCAAAGCGCTCGTCCAGGGATaGCAAGACACAGTAGCGGATATCAGGGTCAGGATCTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: VFCLGQVGIKALVQG*QDTVADIRVRICYA
Trigger: GGCATAACAGATCCTGACCCTGATATCCGCTACTGTGTCTTGGCATCCCTGGACGAGCGCTTTGATGCCCACCTGGCCCAGGCAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp AGGAGCCCCAACACTCGGATAGCCTCTCTCCGAGTGCCCTGGTTCTaGTCCGTCTTCAGGAAATTCAGCAGCACTTCAAGCAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: RSPNTRIASLRVPWF*SVFRKFSSTSSKVG
Trigger: CCCCACTTTGCTTGAAGTGCTGCTGAATTTCCTGAAGACGGAGCAGAACCAGGGCACTCGGAGAGAGGCTATCCGAGTGTTGGGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CTTCTGGCAGCTCCCCAGGCCTTTTGGAGGTTGATGGTGCTGACATaGAGTTTCTTCATGGGTCCTGTCTCAACTGGTCCACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLAAPQAFWRLMVLT*SFFMGPVSTGPLAR
Trigger: CCTGGCCAGTGGACCAGTTGAGACAGGACCCATGAAGAAACTGCATGTCAGCACCATCAACCTCCAAAAGGCCTGGGGAGCTGCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp CAGAATCACAGTGAGCAGGAGAGAGCCGTGCCAAGCTCAAACAGATGTAAGGCCTGCAGGACGCTCACGTaGCTAGATGTGGCGGCACTG +
Preference number: 5 (lower is better)
Translates to: QNHSEQERAVPSSNRCKACRTLT*LDVAAL
Trigger: CAGTGCCGCCACATCTAGCAACGTGAGCGTCCTGCA...GGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGCTCACTGTGATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS-3UTR CAA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGGGAGACGATTCGGCCTaGGCTGTTGTCATGCATGAA +
Preference number: 5 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRGDDSA*AVVMHE
Trigger: TTCATGCATGACAACAGCCAAGGCCGAATCGTCTCC...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACCGGCACATCAGAAGTTaGGGGGACACATACTGCAGC +
Preference number: 5 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDRHIRS*GDTYCS
Trigger: GCTGCAGTATGTGTCCCCCAAACTTCTGATGTGCCG...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp TGCTGTAGTCAGAGGAATCCTGACTTGACTTGGACTCTGACAGGCTaGCAGCGGAAGCGTCCCGGGACTGGTCGATCATGCCGATGTTCA +
Preference number: 5 (lower is better)
Translates to: CCSQRNPDLTWTLTG*QRKRPGTGRSCRCS
Trigger: TGAACATCGGCATGATCGACCAGTCCCGGGACGCTTCCGCTGTCAGCCTGTCAGAGTCCAAGTCAAGTCAGGATTCCTCTGACTACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp TTGCCACACAGGCTTGCGTACTTGAGCCAGGTTCTCATGTCCTCATaGGGGCTGACCACAAGGGACCGGACCATGAGGATTTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LPHRLAYLSQVLMSS*GLTTRDRTMRIFCQ
Trigger: CTGGCAGAAAATCCTCATGGTCCGGTCCCTTGTGGTCAGCCCTCATGAGGACATGAGAACCTGGCTCAAGTACGCAAGCCTGTGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp ATGAGGGCCTGTGGGTGGTACCGACCAATATCTGTGAGAAGCTGGTaGATGAGCCGGCCCACCAAGGGTCTGGGTGTGTCAATTCTTGCA +
Preference number: 5 (lower is better)
Translates to: MRACGWYRPISVRSW*MSRPTKGLGVSILA
Trigger: TGCAAGAATTGACACACCCAGACCCTTGGTGGGCCGGCTCATTCACCAGCTTCTCACAGATATTGGTCGGTACCACCCACAGGCCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GCTCGTGCCAACATGCTGATGCACGTGAATACGGTGGCATCCACCTaGACGGTTTTCTGCCTCTTGTGGGCAAAGTCCTTTGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ARANMLMHVNTVAST*TVFCLLWAKSFGGS
Trigger: GCTTCCTCCAAAGGACTTTGCCCACAAGAGGCAGAAAACCGTGCAGGTGGATGCCACCGTATTCACGTGCATCAGCATGTTGGCACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp TTCTTCAAATGTGTGCCGGTACCACTGAGGCTTCTGCATTTCCTTTaGTTCCCGCTGCGTGGTGAGAATCAGACAGGCACGAAGGGCCGC +
Preference number: 5 (lower is better)
Translates to: FFKCVPVPLRLLHFL*FPLRGENQTGTKGR
Trigger: GCGGCCCTTCGTGCCTGTCTGATTCTCACCACGCAGCGGGAACCAAAGGAAATGCAGAAGCCTCAGTGGTACCGGCACACATTTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp ATTTCTCTTCCATCAAGTCTCTGCAACAGCGGCTTTCCACCAGAGTaGACTTGGCAGGGCTGGGGGACGTCCCAAATCCCATCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: ISLPSSLCNSGFPPE*TWQGWGTSQIPSGL
Trigger: AAGGCCTGATGGGATTTGGGACGTCCCCCAGCCCTGCCAAGTCCACTCTGGTGGAAAGCCGCTGTTGCAGAGACTTGATGGAAGAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GGCATCCACCTGCACGGTTTTCTGCCTCTTGTGGGCAAAGTCCTTTaGAGGAAGCGCTGCTCGGATGATGTCAAGTACACGGGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: GIHLHGFLPLVGKVL*RKRCSDDVKYTGQV
Trigger: TACTTGCCCCGTGTACTTGACATCATCCGAGCAGCGCTTCCTCCAAAGGACTTTGCCCACAAGAGGCAGAAAACCGTGCAGGTGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp TCCTTGATTCTCCCAATGCCGCTGTGCTCCAGCTCTGTCAGGATCTaGATGAGCATCTTGCGCAGGAAAGGCATGACGAAGGCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: SLILPMPLCSSSVRI*MSILRRKGMTKAGF
Trigger: GAACCCAGCCTTCGTCATGCCTTTCCTGCGCAAGATGCTCATCCAGATCCTGACAGAGCTGGAGCACAGCGGCATTGGGAGAATCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GCCCCATCACAGACTCGGATGACATTAAGGAATGTGGGCATGACCTaGGGCAGGAACTGCACACACTTGAGCCCCAGGGACTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: APSQTRMTLRNVGMT*GRNCTHLSPRDLKM
Trigger: CATCTTCAAGTCCCTGGGGCTCAAGTGTGTGCAGTTCCTGCCCCAGGTCATGCCCACATTCCTTAATGTCATCCGAGTCTGTGATGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GAGATGCCTCTTCCAGGCCTTCATGCCACATCTCATGCCAGAGGATaGCTACCCGAATCAGCTCTTCACTCACCATCATGGCCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: EMPLPGLHATSHARG*LPESALHSPSWPAG
Trigger: TCCAGCAGGCCATGATGGTGAGTGAAGAGCTGATTCGGGTAGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGAGCTCCCCAGGCCTTTaGGAGGTTGATGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLSSPGL*EVDGAD
Trigger: GTCAGCACCATCAACCTCCAAAAGGCCTGGGGAGCT...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACGACACAAAGGCAGCATaGAAGAGATCCCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDDTKAA*KRSLAM
Trigger: CATGGCCAGGGATCTCTTCAATGCTGCCTTTGTGTC...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGTCCTCCTGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGCCTGATGAGCTCATCTaGCTGGTCTTCATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: MSSWKGRSCEFQHRGVRRPDELI*LVFIQL
Trigger: GAGCTGAATGAAGACCAGCAAGATGAGCTCATCAGG...CCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCAGGAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGAGCAGGTCCCTGGCCTaGTCAATGCACTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETSRSLA*SMHCWA
Trigger: GGCCCAGCAGTGCATTGACAAGGCCAGGGACCTGCT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCAGGTCTGCACAAAGTGTaGCATGTGCTGGAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: FQHRGVRRKTDSLSHVGPGLHKV*HVLEGV
Trigger: GACGCCTTCCAGCACATGCAACACTTTGTGCAGACC...TGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp TGGACACAGCGGGGTAGAACTCGTCCAGGGGCAGGTTTCCCATGTTaGCCAGCATTTCACTGGTGCTGTAGTCAGAGGAATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: WTQRGRTRPGAGFPC*PAFHWCCSQRNPDL
Trigger: CAAGTCAGGATTCCTCTGACTACAGCACCAGTGAAATGCTGGTCAACATGGGAAACCTGCCCCTGGACGAGTTCTACCCCGCTGTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TCGCTTCACTTCAAACTCCACATATTCAGCAGTGAAAGTGTCCCCTaGCATCGCCAGGCGGCCAATGGCCTTGGACGCCATTTCCATGAC +
Preference number: 5 (lower is better)
Translates to: SLHFKLHIFSSESVP*HRQAANGLGRHFHD
Trigger: GTCATGGAAATGGCGTCCAAGGCCATTGGCCGCCTGGCGATGGCAGGGGACACTTTCACTGCTGAATATGTGGAGTTTGAAGTGAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 90 bp AGCTTCCATGCGGATCTCCTTGTGCTCGCTGTTCAGGAAGTGATCTaGGCAGTGTCGGACGAACTGGGTCAGAGAGTGGCCTTCAAATTC +
Preference number: 5 (lower is better)
Translates to: SFHADLLVLAVQEVI*AVSDELGQRVAFKF
Trigger: GAATTTGAAGGCCACTCTCTGACCCAGTTCGTCCGACACTGCGCAGATCACTTCCTGAACAGCGAGCACAAGGAGATCCGCATGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp ACTCGGATGACATTAAGGAATGTGGGCATGACCTGGGGCAGGAACTaGACACACTTGAGCCCCAGGGACTTGAAGATGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: TRMTLRNVGMTWGRN*THLSPRDLKMKVMA
Trigger: GGCCATCACCTTCATCTTCAAGTCCCTGGGGCTCAAGTGTGTGCAGTTCCTGCCCCAGGTCATGCCCACATTCCTTAATGTCATCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TGGGTCCTGTCTCAACTGGTCCACTGGCCAGGGCATCTCCCTGGCTaGTCCTTAGCATTCGATGCTGGTAAATCAAAGGGTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: WVLSQLVHWPGHLPG*SLAFDAGKSKGLLP
Trigger: AGGAAGAAGACCCTTTGATTTACCAGCATCGAATGCTAAGGAGCAGCCAGGGAGATGCCCTGGCCAGTGGACCAGTTGAGACAGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CCCTTTCTGGAACTCCAGTTCTTTGTAGTGCAGTGCTTTGGCATATaGCCGGCACTTGGCAGCTCTCTCACCCAGGAGCACGATGCCATT +
Preference number: 5 (lower is better)
Translates to: PFLELQFFVVQCFGI*PALGSSLTQEHDAI
Trigger: AATGGCATCGTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAGAACTGGAGTTCCAGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GGTTTTATGAGCAAGAGCCAGTCTGCCACTCTTGCCACACAGGCTTaGGTACTTGAGCCAGGTTCTCATGTCCTCATGAGGGCTGACCAC +
Preference number: 5 (lower is better)
Translates to: GFMSKSQSATLATQA*VLEPGSHVLMRADH
Trigger: GTGGTCAGCCCTCATGAGGACATGAGAACCTGGCTCAAGTACGCAAGCCTGTGTGGCAAGAGTGGCAGACTGGCTCTTGCTCATAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GAAGTGGGGTCATTGGCTAGGAGTGTGTTCACCAGGCCAAAGAGCTaGATCACTCGTTCATCCTGCCGCAGATCTTCATGGCCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: EVGSLARSVFTRPKS*ITRSSCRRSSWPFR
Trigger: CCTGAAAGGCCATGAAGATCTGCGGCAGGATGAACGAGTGATGCAGCTCTTTGGCCTGGTGAACACACTCCTAGCCAATGACCCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp AAGCCCATGAGGTCTTTGCAGTACTTGTCATGCACCAGCTGCTGCTaGGTGATCTCCTCCATCTCTTCTCTCAGACGCTCTCCCTCCATG +
Preference number: 5 (lower is better)
Translates to: KPMRSLQYLSCTSCC*VISSISSLRRSPSM
Trigger: CATGGAGGGAGAGCGTCTGAGAGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCATGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GGTTCTGCTCCGTCTTCAGGAAATTCAGCAGCACTTCAAGCAAAGTaGGGTACTTCCTGTAGGGCTCCACCACATAGCCAGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GSAPSSGNSAALQAK*GTSCRAPPHSQCWP
Trigger: TGGCCAGCACTGGCTATGTGGTGGAGCCCTACAGGAAGTACCCCACTTTGCTTGAAGTGCTGCTGAATTTCCTGAAGACGGAGCAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp AACAGCTGGATCGCGGCTAACAGCTTGATGGAGACGATTCGGCCTTaGCTGTTGTCATGCATGAAGACCCGCAGCATGTGTGGGATCAAC +
Preference number: 5 (lower is better)
Translates to: NSWIAANSLMETIRP*LLSCMKTRSMCGIN
Trigger: GTTGATCCCACACATGCTGCGGGTCTTCATGCATGACAACAGCCAAGGCCGAATCGTCTCCATCAAGCTGTTAGCCGCGATCCAGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp TCTTCCCCAGTTGAAAGACAAGCGAAGACAGAGTGTCCATGGCTGTaGAGCGCAGCTCTGGGCTCTGGTCTAGCGTACGAACTATTGGGT +
Preference number: 5 (lower is better)
Translates to: SSPVERQAKTECPWL*SAALGSGLAYELLG
Trigger: ACCCAATAGTTCGTACGCTAGACCAGAGCCCAGAGCTGCGCTCCACAGCCATGGACACTCTGTCTTCGCTTGTCTTTCAACTGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GGTACTTCTTCCCCAGTTGAAAGACAAGCGAAGACAGAGTGTCCATaGCTGTGGAGCGCAGCTCTGGGCTCTGGTCTAGCGTACGAACTA +
Preference number: 5 (lower is better)
Translates to: GTSSPVERQAKTECP*LWSAALGSGLAYEL
Trigger: TAGTTCGTACGCTAGACCAGAGCCCAGAGCTGCGCTCCACAGCCATGGACACTCTGTCTTCGCTTGTCTTTCAACTGGGGAAGAAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGTGGATCAGCGAGTTCTaGCTGCTCCTGCACTTCAGC +
Preference number: 5 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLWISEF*LLLHFS
Trigger: GCTGAAGTGCAGGAGCAGCAAGAACTCGCTGATCCA...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TGGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACCCGGGTCTTCCTTGTTaGTGTCCATCTTCTTGTCGT +
Preference number: 5 (lower is better)
Translates to: WKGRSCEFQHRGVRRKTDPGLPC*CPSSCR
Trigger: ACGACAAGAAGATGGACACAAACAAGGAAGACCCGG...GTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCGCTCAGGGACAAGTTaGTACTGGATAACCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTRSGTS*YWITSS
Trigger: GGAAGAGGTTATCCAGTACAAACTTGTCCCTGAGCG...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGCGAATGATTGGCTGGTaGGGGTCGTATGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLRMIGW*GSYVPG
Trigger: GCCAGGAACATACGACCCCAACCAGCCAATCATTCG...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTTCCCCAGCTGTGTTGTaGACAGCATGCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: GGRQTLLAMLAHPANVATSPAVL*TACSNT
Trigger: GGTGTTTGAGCATGCTGTCAACAACACAGCTGGGGA...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp GCGGCCAATGGCCTTGGACGCCATTTCCATGACAACTGGATCGCTTaGGGGGAGGAGGTTTCGAAGGTAGTTGGCAAATCTGCCAATTCT +
Preference number: 5 (lower is better)
Translates to: AANGLGRHFHDNWIA*GEEVSKVVGKSANS
Trigger: AGAATTGGCAGATTTGCCAACTACCTTCGAAACCTCCTCCCCTCAAGCGATCCAGTTGTCATGGAAATGGCGTCCAAGGCCATTGGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 90 bp CAGCTCTCCGAAGTGTTTCATGGCGTATTCCAACACCCCAGAAGCTaGCTCAGGCTGCTGGAGCTTGTTGTTAATGCTGATGAGGGACTC +
Preference number: 5 (lower is better)
Translates to: QLSEVFHGVFQHPRS*LRLLELVVNADEGL
Trigger: GAGTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTCTGGGGTGTTGGAATACGCCATGAAACACTTCGGAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TTCCTCTCCCCAAAGTACAAGCGAGATGCCTCTTCCAGGCCTTCATaGCACATCTCATGCCAGAGGATGGCTACCCGAATCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: FLSPKYKRDASSRPS*HISCQRMATRISSS
Trigger: TGAAGAGCTGATTCGGGTAGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGCTTGTACTTTGGGGAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CTCAAACATGCCTTTCACGTTCCTCTCCCCAAAGTACAAGCGAGATaGCTCTTCCAGGCCTTCATGCCACATCTCATGCCAGAGGATGGC +
Preference number: 5 (lower is better)
Translates to: LKHAFHVPLPKVQAR*LFQAFMPHLMPEDG
Trigger: GCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGCTTGTACTTTGGGGAGAGGAACGTGAAAGGCATGTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp TTCTCTCTGGTCATAGCGACCTCAAAGCAGTCCCCAAAGTCAATGTaGAGGATCTTCCCACTCAGCCGGTCCAGCATCAGATTGGATGGG +
Preference number: 5 (lower is better)
Translates to: FSLVIATSKQSPKSM*RIFPLSRSSIRLDG
Trigger: CCCATCCAATCTGATGCTGGACCGGCTGAGTGGGAAGATCCTGCACATTGACTTTGGGGACTGCTTTGAGGTCGCTATGACCAGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp ACTCCAGTTCTTTGTAGTGCAGTGCTTTGGCATATGCCCGGCACTTaGCAGCTCTCTCACCCAGGAGCACGATGCCATTGTCATCTCTCA +
Preference number: 5 (lower is better)
Translates to: TPVLCSAVLWHMPGT*QLSHPGARCHCHLS
Trigger: TGAGAGATGACAATGGCATCGTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAGAACTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGAGGAGCACGATGCCATaGTCATCTCTCAGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETRSTMP*SSLSGR
Trigger: CCTGCCGCTGAGAGATGACAATGGCATCGTGCTCCT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTGTATCCTGGAGGTTGTaGCCTCTTGACAAGGAGATA +
Preference number: 5 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTVSWRL*PLDKEI
Trigger: TATCTCCTTGTCAAGAGGCAACAACCTCCAGGATAC...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTCTCTTAGCCATGTTGGTCCGGGACCGCTTATaGCCTTTGGTATTTGTGTCC +
Preference number: 5 (lower is better)
Translates to: VSFSIVGSGGRQTLLAMLVRDRL*PLVFVS
Trigger: GGACACAAATACCAAAGGCAATAAGCGGTCCCGGAC...CAACATGGCTAAGAGAGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GGAAGGGCAGGTCTTGTGAGTTTCAGCATCGTGGGGTCAGGCGGAAGACAGACTGATAAGCAGCTCCACTaGGGTTGGAACATCCAAAGT +
Preference number: 5 (lower is better)
Translates to: GRAGLVSFSIVGSGGRQTDKQLH*GWNIQS
Trigger: ACTTTGGATGTTCCAACCCAAGTGGAGCTGCTTATC...AGTCTGTCTTCCGCCTGACCCCACGATGCTGAAACTCACAAGACCTGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CACGGTTTTCTGCCTCTTGTGGGCAAAGTCCTTTGGAGGAAGCGCTaGTCGGATGATGTCAAGTACACGGGGCAAGTAGACCTTAAACTC +
Preference number: 5 (lower is better)
Translates to: HGFLPLVGKVLWRKR*SDDVKYTGQVDLKL
Trigger: GAGTTTAAGGTCTACTTGCCCCGTGTACTTGACATCATCCGAGCAGCGCTTCCTCCAAAGGACTTTGCCCACAAGAGGCAGAAAACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp AAGTACAAGCGAGATGCCTCTTCCAGGCCTTCATGCCACATCTCATaGCAGAGGATGGCTACCCGAATCAGCTCTTCACTCACCATCATG +
Preference number: 5 (lower is better)
Translates to: KYKRDASSRPSCHIS*QRMATRISSSLTIM
Trigger: CATGATGGTGAGTGAAGAGCTGATTCGGGTAGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGCTTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GGGACACCAGCCAATGTAGCACTGGCAGAGGTTCTCGTGAGATGTTaGCTGCTTGATAAGCAGCTCCACTTGGGTTGGAACATCCAAAGT +
Preference number: 5 (lower is better)
Translates to: GTPANVALAEVLVRC*LLDKQLHLGWNIQS
Trigger: ACTTTGGATGTTCCAACCCAAGTGGAGCTGCTTATCAAGCAGGCAACATCTCACGAGAACCTCTGCCAGTGCTACATTGGCTGGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GGCGGAAGACAGACTCTCTTAGCCATGTTGGCCCATCCTGCAAATGTCGCCACTGACTTCAGCAATGTCTaGAGAAGTGAGAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: GGRQTLLAMLAHPANVATDFSNV*RSESQL
Trigger: GAGTTGGCTCTCACTTCTCAAGACATTGCTGAAGTC...AGTGGCGACATTTGCAGGATGGGCCAACATGGCTAAGAGAGTCTGTCTTCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp GAGGCTGGCGATGGCCAAGATGCCACCCTTCCTCTCATTGGCATCTaGGCTGGAAACCAGTTCAAAAATGTGATGGTTCAGCTGGTCATA +
Preference number: 5 (lower is better)
Translates to: EAGDGQDATLPLIGI*AGNQFKNVMVQLVI
Trigger: TATGACCAGCTGAACCATCACATTTTTGAACTGGTTTCCAGCTCAGATGCCAATGAGAGGAAGGGTGGCATCTTGGCCATCGCCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS TCA 90 bp TTTTTAGCCACAGTAGCTTGGCCAGGTCGTCCCCAGCTGTGTTGTTaGCAGCATGCTCAAACACCTCTACCTTCTGCATCAACGTCAGGT +
Preference number: 5 (lower is better)
Translates to: FLATVAWPGRPQLCC*QHAQTPLPSASTSG
Trigger: ACCTGACGTTGATGCAGAAGGTAGAGGTGTTTGAGCATGCTGTCAACAACACAGCTGGGGACGACCTGGCCAAGCTACTGTGGCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp CAGCGTGTTGCTGTGTTCACACATGTTCTTCAAGATCTTGTTGGCTaGATTGTGACGGGCTGTGGTGGTAGACTTAGAAGCCACCGTCAG +
Preference number: 5 (lower is better)
Translates to: QRVAVFTHVLQDLVG*IVTGCGGRLRSHRQ
Trigger: CTGACGGTGGCTTCTAAGTCTACCACCACAGCCCGTCACAATGCAGCCAACAAGATCTTGAAGAACATGTGTGAACACAGCAACACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp AGGAGTGTGTTCACCAGGCCAAAGAGCTGCATCACTCGTTCATCCTaGCGCAGATCTTCATGGCCTTTCAGGAGGAAAACAAACTCATGC +
Preference number: 5 (lower is better)
Translates to: RSVFTRPKSCITRSS*RRSSWPFRRKTNSC
Trigger: GCATGAGTTTGTTTTCCTCCTGAAAGGCCATGAAGATCTGCGGCAGGATGAACGAGTGATGCAGCTCTTTGGCCTGGTGAACACACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp ATGCTGCTGATACGAACTAGCTCGTTGAGGATCAGCAAGGCTCCGTaGATTCGATCATCTCGATTCATACCCTTCTCTTTGGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: MLLIRTSSLRISKAP*IRSSRFIPFSLARV
Trigger: GACCCTGGCCAAAGAGAAGGGTATGAATCGAGATGATCGAATCCACGGAGCCTTGCTGATCCTCAACGAGCTAGTTCGTATCAGCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp AGGATGGCTACCCGAATCAGCTCTTCACTCACCATCATGGCCTGCTaGACCAGCGTGTTGCTGTGTTCACACATGTTCTTCAAGATCTTG +
Preference number: 5 (lower is better)
Translates to: RMATRISSSLTIMAC*TSVLLCSHMFFKIL
Trigger: CAAGATCTTGAAGAACATGTGTGAACACAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAGTGAAGAGCTGATTCGGGTAGCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp TATGGATTGAATGCGAATGATTGGCTGGTTGGGGTCGTATGTTCCTaGCACAGCCAACTCAAGGTCTCGGCACATCAGAAGTTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: YGLNANDWLVGVVCS*HSQLKVSAHQKFGG
Trigger: TCCCCCAAACTTCTGATGTGCCGAGACCTTGAGTTGGCTGTGCCAGGAACATACGACCCCAACCAGCCAATCATTCGCATTCAATCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp TGTGATGACTTGCAAAGACGGGGCTATGGATTGAATGCGAATGATTaGCTGGTTGGGGTCGTATGTTCCTGGCACAGCCAACTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CDDLQRRGYGLNAND*LVGVVCSWHSQLKV
Trigger: GACCTTGAGTTGGCTGTGCCAGGAACATACGACCCCAACCAGCCAATCATTCGCATTCAATCCATAGCCCCGTCTTTGCAAGTCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCTGCAGGACGCTCACGTaGCTAGATGTGGCGGCACTG +
Preference number: 5 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVCRTLT*LDVAAL
Trigger: CAGTGCCGCCACATCTAGCAACGTGAGCGTCCTGCA...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGGGCTGCTGGAGCTTGTaGTTAATGCTGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETGCWSL*LMLMRD
Trigger: GTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCC...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACGCTTCACTCTCACTGTaGCTGCCCTCTGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNASLSL*LPSVLV
Trigger: CACCAGCACAGAGGGCAGCAACAGTGAGAGTGAAGC...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGTGCTGGACCAGCGTGTaGCTGTGTTCACACATGTTC +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETCWTSV*LCSHMF
Trigger: GAACATGTGTGAACACAGCAACACGCTGGTCCAGCA...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp AAGTGTTTCATGGCGTATTCCAACACCCCAGAAGCTGCCTCAGGCTaGTGGAGCTTGTTGTTAATGCTGATGAGGGACTCAAGTATGGCA +
Preference number: 5 (lower is better)
Translates to: KCFMAYSNTPEAASG*WSLLLMLMRDSSMA
Trigger: TGCCATACTTGAGTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTCTGGGGTGTTGGAATACGCCATGAAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GCGCTGGTGGTTGATCCGGTGTCGCACGAGGACTTTATTCACCATTaGAATGAAGATCTGGTACTTCTTCCCCAGTTGAAAGACAAGCGA +
Preference number: 5 (lower is better)
Translates to: ALVVDPVSHEDFIHH*NEDLVLLPQLKDKR
Trigger: TCGCTTGTCTTTCAACTGGGGAAGAAGTACCAGATCTTCATTCCAATGGTGAATAAAGTCCTCGTGCGACACCGGATCAACCACCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATAGTAGGCATAGGTCACTaGAGGGTGAGCGGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIVGIGH*RVSGWQ
Trigger: CTGCCAACCGCTCACCCTCAAGTGACCTATGCCTAC...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGAGACGGGGCTATGGATaGAATGCGAATGATTGGCTG +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETRRGYG*NANDWL
Trigger: CAGCCAATCATTCGCATTCAATCCATAGCCCCGTCT...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATATTTAGCCACAGTAGCTaGGCCAGGTCGTCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNIFSHSS*ARSSPA
Trigger: AGCTGGGGACGACCTGGCCAAGCTACTGTGGCTAAA...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TGTTCTCCCAAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCGGTCCAGCATCAGATaGGATGGGTGCCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: CSPKIQGLASEGLLCFTVRSSIR*DGCLSP
Trigger: TGGAGACAGGCACCCATCCAATCTGATGCTGGACCG...GACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTTGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGGCAGCTCCACTTGGGTaGGAACATCCAAAGTGTCAT +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETAAPLG*EHPKCH
Trigger: ATGACACTTTGGATGTTCCAACCCAAGTGGAGCTGC...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 90 bp GAATCAGCTCTTCACTCACCATCATGGCCTGCTGGACCAGCGTGTTaGTGTGTTCACACATGTTCTTCAAGATCTTGTTGGCTGCATTGT +
Preference number: 5 (lower is better)
Translates to: ESALHSPSWPAGPAC*CVHTCSSRSCWLHC
Trigger: ACAATGCAGCCAACAAGATCTTGAAGAACATGTGTGAACACAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAGTGAAGAGCTGATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp CTTATTGCCTTTGGTATTTGTGTCCATCAGCCTCCAGTTGAGCAGTaGGTCATAGACAAAGGCTTCCAGCACAGCCATGACACTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LIAFGICVHQPPVEQ*VIDKGFQHSHDTVL
Trigger: AAGGACAGTGTCATGGCTGTGCTGGAAGCCTTTGTCTATGACCCACTGCTCAACTGGAGGCTGATGGACACAAATACCAAAGGCAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp GTTCTCGTGAGATGTTGCCTGCTTGATAAGCAGCTCCACTTGGGTTaGAACATCCAAAGTGTCATCATGAGAGAAATCCCGACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: VLVRCCLLDKQLHLG*NIQSVIMREIPTSE
Trigger: CTCACTGGTCGGGATTTCTCTCATGATGACACTTTGGATGTTCCAACCCAAGTGGAGCTGCTTATCAAGCAGGCAACATCTCACGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTATACGAACTAGCTCGTaGAGGATCAGCAAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAIRTSS*RISKAP
Trigger: CGGAGCCTTGCTGATCCTCAACGAGCTAGTTCGTAT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGGGTGCCGGAGGGGTTaGTGCATAAGGACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPGCRRG*CIRTRD
Trigger: GTCCCTGGTCCTTATGCACAAACCCCTCCGGCACCC...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTGGCAGGTTTCCCATGTaGACCAGCATTTCACTGGTG +
Preference number: 5 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAGRFPM*TSISLV
Trigger: CACCAGTGAAATGCTGGTCAACATGGGAAACCTGCC...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp CATTTATGTTCTGAGTCCCTGCTGCAAATACAGCATATCCCTCCCTCACTGAACGTGGTGAGAGAGGGATaGATCTCGGAAGATCCGCAT +
Preference number: 5 (lower is better)
Translates to: HLCSESLLQIQHIPPSLNVVREG*ISEDPH
Trigger: ATGCGGATCTTCCGAGATCAATCCCTCTCTCACCAC...GTTCAGTGAGGGAGGGATATGCTGTATTTGCAGCAGGGACTCAGAACATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTAGGAACTGCACACACTaGAGCCCCAGGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTRNCTH*SPRDLK
Trigger: CTTCAAGTCCCTGGGGCTCAAGTGTGTGCAGTTCCT...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTCAGGCCTTTTGGAGGTaGATGGTGCTGACATGCAGT +
Preference number: 5 (lower is better)
Translates to: TRISQLPIFCSPKIQGLAQAFWR*MVLTCS
Trigger: ACTGCATGTCAGCACCATCAACCTCCAAAAGGCCTG...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGCAAGTTCAGGAGGGTTaGTGTGACTTCAGCAATGTC +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETQVQEG*CDFSNV
Trigger: GACATTGCTGAAGTCACACAAACCCTCCTGAACTTG...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ACAGTGTCTTTTCAACAGCAGCTAGGAGGTTGGCGGAAGCCAACTTTGAATATACTTGAGGGTGAGCGGTaGGCAGAGGATGGTCAAGTT +
Preference number: 5 (lower is better)
Translates to: TVSFQQQLGGWRKPTLNILEGER*AEDGQV
Trigger: AACTTGACCATCCTCTGCCAACCGCTCACCCTCAAG...TATATTCAAAGTTGGCTTCCGCCAACCTCCTAGCTGCTGTTGAAAAGACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATGGTTTTAGTCCACTGGAAGCACAGACAAGGTACTAAAGCCTGGGAGGAGACGCTTCTCATCACGGGCTaGGTTCTGATGTTTGTAGTG +
Preference number: 5 (lower is better)
Translates to: MVLVHWKHRQGTKAWEETLLITG*VLMFVV
Trigger: CACTACAAACATCAGAACCAAGCCCGTGATGAGAAG...CGTCTCCTCCCAGGCTTTAGTACCTTGTCTGTGCTTCCAGTGGACTAAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGCTGCAGTGGTGGCATaGGTGATGTTGGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPAAVVA*VMLAPL
Trigger: CAGCGGGGCCAACATCACCAATGCCACCACTGCAGC...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCATCCAGCCAGTCGTCCTaGGAGACCCTTCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPSSQSS*ETLLAA
Trigger: AGCTGCCAGAAGGGTCTCCAAGGACGACTGGCTGGA...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAAGGCTTGGCTAGAACGGAAGAAGCCTaGAACAGCAGGGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: TRISQLPIFCSPKIQGLARTEEA*NSRDSV
Trigger: TACACTGTCCCTGCTGTTCAAGGCTTCTTCCGTTCT...AGCCAAGCCTTGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp AACTCAGCCAAGTTCAGGAGGGTTTGTGTGACTTCAGCAATGTCTTaGGAAGTGAGAGCCAACTCAATACTCCTGATGAGCTCATCTTGC +
Preference number: 5 (lower is better)
Translates to: NSAKFRRVCVTSAMS*EVRANSILLMSSSC
Trigger: GCAAGATGAGCTCATCAGGAGTATTGAGTTGGCTCTCACTTCTCAAGACATTGCTGAAGTCACACAAACCCTCCTGAACTTGGCTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTAAGCCCATGAGGTCTTaGCAGTACTTGTCATGCACC +
Preference number: 5 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTKPMRS*QYLSCT
Trigger: GGTGCATGACAAGTACTGCAAAGACCTCATGGGCTT...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTGTGATGTGCCGAGGCTaGGTCCCGAAGCCCATGAGG +
Preference number: 5 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLVMCRG*VPKPMR
Trigger: CCTCATGGGCTTCGGGACCAAGCCTCGGCACATCAC...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACCAACCACAAGCAGCTaGCTGAGCACATCTGCCACC +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPPTTSS*LSTSAT
Trigger: GGTGGCAGATGTGCTCAGCAAGCTGCTTGTGGTTGG...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTGTAGAGGTCCCAGGCTaGCGTGAGGTCCTTGACGTT +
Preference number: 5 (lower is better)
Translates to: LVERTNWIILSAMFMMSFVEVPG*REVLDV
Trigger: AACGTCAAGGACCTCACGCAAGCCTGGGACCTCTAC...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp AAAATCCAAGGCTTGGCTTCTGAAGGATTACTGTGTTTCACTGTCCTGGGAACTCTTGGATGTGATGACTaGCAAAGACGGGGCTATGGA +
Preference number: 5 (lower is better)
Translates to: KIQGLASEGLLCFTVLGTLGCDD*QRRGYG
Trigger: TCCATAGCCCCGTCTTTGCAAGTCATCACATCCAAG...AGTTCCCAGGACAGTGAAACACAGTAATCCTTCAGAAGCCAAGCCTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTGCCATGACACTGTCCTaGTGTTCCCGGAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: LVERTNWIILSAMFMMSFAMTLS*CSRSTS
Trigger: GGAAGTGCTCCGGGAACACAAGGACAGTGTCATGGC...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp TGGAGGTTGTTGCCTCTTGACAAGGAGATAGAACGGAAGAAGCCTTaGACAGCAGGGACAGTGTACAACAAGAGAGTTTTGGATAAATCC +
Preference number: 5 (lower is better)
Translates to: WRLLPLDKEIERKKP*TAGTVYNKRVLDKS
Trigger: GGATTTATCCAAAACTCTCTTGTTGTACACTGTCCCTGCTGTTCAAGGCTTCTTCCGTTCTATCTCCTTGTCAAGAGGCAACAACCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 90 bp ATGAATGAATGGATGGATTCTGGCACAGTGGTCCCTGCTTTCTTATaGGCTGGTTCTCCAAGTTCTACACCGTCCAAAATTTCTACTGAC +
Preference number: 5 (lower is better)
Translates to: MNEWMDSGTVVPAFL*AGSPSSTPSKISTD
Trigger: GTCAGTAGAAATTTTGGACGGTGTAGAACTTGGAGAACCAGCCCATAAGAAAGCAGGGACCACTGTGCCAGAATCCATCCATTCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAGGTCTTTGCAGTACTaGTCATGCACCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSRSLQY*SCTSCC
Trigger: GCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCT...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAATTCGGCCTTGGCTGTaGTCATGCATGAAGACCCGC +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPIRPWL*SCMKTR
Trigger: GCGGGTCTTCATGCATGACAACAGCCAAGGCCGAAT...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCGTGGGGCTGTTCTCATaGCTCTCAGCTTCACTCTCA +
Preference number: 5 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSVGLFS*LSASLS
Trigger: TGAGAGTGAAGCTGAGAGCAATGAGAACAGCCCCAC...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCAATCTGGATGAGCATCTaGCGCAGGAAAGGCATGACG +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPIWMSI*RRKGMT
Trigger: CGTCATGCCTTTCCTGCGCAAGATGCTCATCCAGAT...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCACAGAGGAATCCTGACTaGACTTGGACTCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPQRNPD*TWTLTG
Trigger: GCCTGTCAGAGTCCAAGTCAAGTCAGGATTCCTCTG...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTTCGTCCCCAGCTGTGTaGTTGACAGCATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LVERTNWIILSAMFMMSFSSPAV*LTACSN
Trigger: GTTTGAGCATGCTGTCAACAACACAGCTGGGGACGA...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTCCATGCGGATCTCCTaGTGCTCGCTGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLSMRIS*CSLFRK
Trigger: CTTCCTGAACAGCGAGCACAAGGAGATCCGCATGGA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCGTACTTCTTCCCCAGTaGAAAGACAAGCGAAGACAG +
Preference number: 5 (lower is better)
Translates to: VKSKPVFLSYPSSVLPKSVLLPQ*KDKRRQ
Trigger: CTGTCTTCGCTTGTCTTTCAACTGGGGAAGAAGTAC...GGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp CTGGTTGAGAGGACCAACTGGATTATTCTGTCAGCAATGTTTATGATGAGTTTTTCAGGCTGCTGGAGCTaGTTGTTAATGCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: LVERTNWIILSAMFMMSFSGCWS*LLMLMR
Trigger: CCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGA...AAAACTCATCATAAACATTGCTGACAGAATAATCCAGTTGGTCCTCTCAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 90 bp GAGAAATCCCGACCAGTGAGCTTATCTCGAACCCTGTTAATAATCTaGATAGCTTTCTTGTTTAAGGCTTCTGGTTTCACCAAACCGTCT +
Preference number: 5 (lower is better)
Translates to: EKSRPVSLSRTLLII*IAFLFKASGFTKPS
Trigger: AGACGGTTTGGTGAAACCAGAAGCCTTAAACAAGAAAGCTATTCAGATTATTAACAGGGTTCGAGATAAGCTCACTGGTCGGGATTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTACGTTCCTTCTCCTTCTaGACACAGCTCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALRSFSF*TQLRTW
Trigger: CCATGTCCTGAGCTGTGTCAAGAAGGAGAAGGAACG...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCAGAGGATGGTCAAGTaGCCGAGATGGATCAACTCC +
Preference number: 5 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLQRMVK*PRWINS
Trigger: GGAGTTGATCCATCTCGGCAACTTGACCATCCTCTG...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp TTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTCTGTTCTCCCAAAATCCATTCATACCCTTCTCTTaGGCCAGGGTCTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: LSQNPYFSVTHLLFSQNPFIPFS*ARVSSK
Trigger: TTTTGATGAGACCCTGGCCAAAGAGAAGGGTATGAA...TGGATTTTGGGAGAACAGAAGATGGGTAACTGAGAAATACGGGTTTTGACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp ATTTATTGGCACAAAATTTACTCAGATACAACGTGGTGTCTAGATGTGGCTTTAAGTGTATCCTGGAGGTaGTTGCCTCTTGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: IYWHKIYSDTTWCLDVALSVSWR*LPLDKE
Trigger: CTCCTTGTCAAGAGGCAACAACCTCCAGGATACACT...TAAAGCCACATCTAGACACCACGTTGTATCTGAGTAAATTTTGTGCCAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTTCCGAGGCCTCTGCTaGGATGTGATGACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLFRGLC*DVMTCK
Trigger: TTTGCAAGTCATCACATCCAAGCAGAGGCCTCGGAA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS-3UTR CAA 90 bp GATGAGTTTTCTTGTAAGTTAAGTCAAAACCCGTATTTCTCAGTTACCCATCTTTATTGCCTTTGGTATTaGTGTCCATCAGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: DEFSCKLSQNPYFSVTHLYCLWY*CPSASS
Trigger: ACTGGAGGCTGATGGACACAAATACCAAAGGCAATA...AAGATGGGTAACTGAGAAATACGGGTTTTGACTTAACTTACAAGAAAACTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp TTCCGGCTCTTCAGTCCACTGGCGAACTGCTGCAGGACGCTCACGTaGCTAGATGTGGCGGCACTGGCGGTGGCCACGGCAGGACCCGTC +
Preference number: 6 (lower is better)
Translates to: FRLFSPLANCCRTLT*LDVAALAVATAGPV
Trigger: GACGGGTCCTGCCGTGGCCACCGCCAGTGCCGCCACATCTAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACTGAAGAGCCGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 72 bp CCCAGCAGTCCCACCAAGGCGTTCGGCTGCTGGGGCTaGACAGCCTGGAAACTGGTGAAGGGCGTGATGTGC +
Preference number: 6 (lower is better)
Translates to: PSSPTKAFGCWG*TAWKLVKGVMC
Trigger: GCACATCACGCCCTTCACCAGTTTCCAGGCTGTGCAGCCCCAGCAGCCGAACGCCTTGGTGGGACTGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GAGCTGTACCCCAGCAGTCCCACCAAGGCGTTCGGCTaGTGGGGCTGCACAGCCTGGAAACTGGTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: ELYPSSPTKAFG*WGCTAWKLVKG
Trigger: GCCCTTCACCAGTTTCCAGGCTGTGCAGCCCCAGCAGCCGAACGCCTTGGTGGGACTGCTGGGGTACAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GCGTTGGACACCAGGTGCCCCAGCATGCGGGCGCTCTaGTCCTTGATTCTCCCAATGCCGCTGTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ALDTRCPSMRAL*SLILPMPLCSS
Trigger: GCTGGAGCACAGCGGCATTGGGAGAATCAAGGAGCAGAGCGCCCGCATGCTGGGGCACCTGGTGTCCAACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GTCTGGCTAACCACGTGGGCATGGCCGCTGATGAGGTaGATGGAGGGTGTGAGCAGGCGGGAGCAGGTGCGA +
Preference number: 6 (lower is better)
Translates to: VWLTTWAWPLMR*MEGVSRREQVR
Trigger: TCGCACCTGCTCCCGCCTGCTCACACCCTCCATCCACCTCATCAGCGGCCATGCCCACGTGGTTAGCCAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GGGGCGTTGGACACCAGGTGCCCCAGCATGCGGGCGCTCTGCTCCTaGATTCTCCCAATGCCGCTGTGCTCCAGCTCTGTCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: GALDTRCPSMRALCS*ILPMPLCSSSVRIW
Trigger: CCAGATCCTGACAGAGCTGGAGCACAGCGGCATTGGGAGAATCAAGGAGCAGAGCGCCCGCATGCTGGGGCACCTGGTGTCCAACGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CCCGGCACTTGGCAGCTCTCTCACCCAGGAGCACGATaGCATTGTCATCTCTCAGCGGCAGGGGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: PGTWQLSHPGAR*HCHLSAAGGPC
Trigger: ACAAGGGCCCCCTGCCGCTGAGAGATGACAATGGCATCGTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp TTCAGTCCACTGGCGAACTGCTGCAGGACGCTCACGTaGCTAGATGTGGCGGCACTGGCGGTGGCCACGGCA +
Preference number: 6 (lower is better)
Translates to: FSPLANCCRTLT*LDVAALAVATA
Trigger: TGCCGTGGCCACCGCCAGTGCCGCCACATCTAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACTGAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS CAA 72 bp GACACCAGGTGCCCCAGCATGCGGGCGCTCTGCTCCTaGATTCTCCCAATGCCGCTGTGCTCCAGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: DTRCPSMRALCS*ILPMPLCSSSV
Trigger: GACAGAGCTGGAGCACAGCGGCATTGGGAGAATCAAGGAGCAGAGCGCCCGCATGCTGGGGCACCTGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp ATAGAGCACAGCAGTGAGCGCGGGGCTCAGGCCCACTaGCAACATGGGCTCCAGCAGCTCCTTGATGTCCTG +
Preference number: 6 (lower is better)
Translates to: IEHSSERGAQAH*QHGLQQLLDVL
Trigger: CAGGACATCAAGGAGCTGCTGGAGCCCATGTTGGCAGTGGGCCTGAGCCCCGCGCTCACTGCTGTGCTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CACCTGGCCATGAGCTTATGCAGCTCCTGCTTGTGCTaGTGGTCCTCTGTGGCGATGGCATGCTGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: HLAMSLCSSCLC*WSSVAMACWAC
Trigger: GCAGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCATAAGCTCATGGCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GACAGGCACGAAGGGCCGCTACAGCGCCTTCCCGGATaGCCTGCTTGGGGTCCCACACAGCCACAAAAATGT +
Preference number: 6 (lower is better)
Translates to: DRHEGPLQRLPG*PAWGPTQPQKC
Trigger: ACATTTTTGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGGAAGGCGCTGTAGCGGCCCTTCGTGCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS CCA 72 bp GACTCAAGCGCCTCAGCCACTCCAGCCAGTCGTCCTTaGAGACCCTTCTGGCAGCTCCCCAGGCCTTTTGGA +
Preference number: 6 (lower is better)
Translates to: DSSASATPASRP*RPFWQLPRPFG
Trigger: TCCAAAAGGCCTGGGGAGCTGCCAGAAGGGTCTCCAAGGACGACTGGCTGGAGTGGCTGAGGCGCTTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GGCTGCACAGCCTGGAAACTGGTGAAGGGCGTGATGTaGCGAGGCTTGGTCCCGAAGCCCATGAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: GCTAWKLVKGVM*RGLVPKPMRSL
Trigger: CAAAGACCTCATGGGCTTCGGGACCAAGCCTCGGCACATCACGCCCTTCACCAGTTTCCAGGCTGTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp ACTGCCAACATGGGCTCCAGCAGCTCCTTGATGTCCTaGTGGATGCCCGGCCCCATTGCTCGTGCCAACATG +
Preference number: 6 (lower is better)
Translates to: TANMGSSSSLMS*WMPGPIARANM
Trigger: CATGTTGGCACGAGCAATGGGGCCGGGCATCCAGCAGGACATCAAGGAGCTGCTGGAGCCCATGTTGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GGGTGTCCCGTGGGATCATGCAGGTGTACTCCTCCATaGTGTCCCACTGACCTAAACCCCACGCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: GCPVGSCRCTPP*CPTDLNPTLQQ
Trigger: CTGCTGCAGCGTGGGGTTTAGGTCAGTGGGACAGCATGGAGGAGTACACCTGCATGATCCCACGGGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp AGTCTCTGCAACAGCGGCTTTCCACCAGAGTGGACTTaGCAGGGCTGGGGGACGTCCCAAATCCCATCAGGC +
Preference number: 6 (lower is better)
Translates to: SLCNSGFPPEWT*QGWGTSQIPSG
Trigger: GCCTGATGGGATTTGGGACGTCCCCCAGCCCTGCCAAGTCCACTCTGGTGGAAAGCCGCTGTTGCAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TTGCTGAGCACATCTGCCACCACCTGCACTGCAGTCTaGCTAACCACGTGGGCATGGCCGCTGATGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LLSTSATTCTAV*LTTWAWPLMRW
Trigger: CCACCTCATCAGCGGCCATGCCCACGTGGTTAGCCAGACTGCAGTGCAGGTGGTGGCAGATGTGCTCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp TATGCCCGGCACTTGGCAGCTCTCTCACCCAGGAGCACGATGCCATaGTCATCTCTCAGCGGCAGGGGGCCCTTGTCACTGTGTTCCATG +
Preference number: 6 (lower is better)
Translates to: YARHLAALSPRSTMP*SSLSGRGPLSLCSM
Trigger: CATGGAACACAGTGACAAGGGCCCCCTGCCGCTGAGAGATGACAATGGCATCGTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp CAAATTCAAAGCTGCCAAGGGTTCGAAGGGCAAGAGTaGTGCTGGCCACGTCGCTGGCCTCAGGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: QIQSCQGFEGQE*CWPRRWPQGGW
Trigger: CCACCCTCCCTGAGGCCAGCGACGTGGCCAGCATCACTCTTGCCCTTCGAACCCTTGGCAGCTTTGAATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp GGCAGCCCTGCAGTCTCTCCCACCAGATCTGCCGGATaGTCTCCCGACGCTCAGGGACAAGTTTGTACTGGA +
Preference number: 6 (lower is better)
Translates to: GSPAVSPTRSAG*SPDAQGQVCTG
Trigger: TCCAGTACAAACTTGTCCCTGAGCGTCGGGAGATCATCCGGCAGATCTGGTGGGAGAGACTGCAGGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TCCTCATTCCGGCTCTTCAGTCCACTGGCGAACTGCTaGAGGACGCTCACGTTGCTAGATGTGGCGGCACTG +
Preference number: 6 (lower is better)
Translates to: SSFRLFSPLANC*RTLTLLDVAAL
Trigger: CAGTGCCGCCACATCTAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACTGAAGAGCCGGAATGAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 72 bp GTCTCCTCATTCCGGCTCTTCAGTCCACTGGCGAACTaGTGCAGGACGCTCACGTTGCTAGATGTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: VSSFRLFSPLAN*CRTLTLLDVAA
Trigger: TGCCGCCACATCTAGCAACGTGAGCGTCCTGCAGCAGTTCGCCAGTGGACTGAAGAGCCGGAATGAGGAGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS GCA 72 bp GCGGATCTCCTTGTGCTCGCTGTTCAGGAAGTGATCTaGGCAGTGTCGGACGAACTGGGTCAGAGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: ADLLVLAVQEVI*AVSDELGQRVA
Trigger: GGCCACTCTCTGACCCAGTTCGTCCGACACTGCGCAGATCACTTCCTGAACAGCGAGCACAAGGAGATCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CTGGGCCAGGTGGGCATCAAAGCGCTCGTCCAGGGATaGCAAGACACAGTAGCGGATATCAGGGTCAGGATC +
Preference number: 6 (lower is better)
Translates to: LGQVGIKALVQG*QDTVADIRVRI
Trigger: GATCCTGACCCTGATATCCGCTACTGTGTCTTGGCATCCCTGGACGAGCGCTTTGATGCCCACCTGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CGAAGGCTGGGTTCATGCTGCTTAGTCGGCCCACAGTaGAGATGGCCAGCTCGCGGATCTCAAAGACCTGGT +
Preference number: 6 (lower is better)
Translates to: RRLGSCCLVGPQ*RWPARGSQRPG
Trigger: ACCAGGTCTTTGAGATCCGCGAGCTGGCCATCTGCACTGTGGGCCGACTAAGCAGCATGAACCCAGCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TGGGGTACTTCCTGTAGGGCTCCACCACATAGCCAGTaGTGGCCACCAACTGTCCCAGGGTCCACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: WGTSCRAPPHSQ*WPPTVPGSTKP
Trigger: TGGCTTTGTGGACCCTGGGACAGTTGGTGGCCAGCACTGGCTATGTGGTGGAGCCCTACAGGAAGTACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp ATACGCTGGCAGCCCTGCAGTCTCTCCCACCAGATCTaGCGGATGATCTCCCGACGCTCAGGGACAAGTTTG +
Preference number: 6 (lower is better)
Translates to: IRWQPCSLSHQI*RMISRRSGTSL
Trigger: CAAACTTGTCCCTGAGCGTCGGGAGATCATCCGGCAGATCTGGTGGGAGAGACTGCAGGGCTGCCAGCGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TGCTGCTGGTCCTCTGTGGCGATGGCATGCTGGGCCTaGTGCTGCATGGTCTGCACAAAGTGTTGCATGTGC +
Preference number: 6 (lower is better)
Translates to: CCWSSVAMACWA*CCMVCTKCCMC
Trigger: GCACATGCAACACTTTGTGCAGACCATGCAGCAGCAGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TCCTGCTTGTGCTGCTGGTCCTCTGTGGCGATGGCATaGTGGGCCTGCTGCTGCATGGTCTGCACAAAGTGT +
Preference number: 6 (lower is better)
Translates to: SCLCCWSSVAMA*WACCCMVCTKC
Trigger: ACACTTTGTGCAGACCATGCAGCAGCAGGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp AAACACCTGGCCATGAGCTTATGCAGCTCCTGCTTGTaGTGCTGGTCCTCTGTGGCGATGGCATGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: KHLAMSLCSSCL*CWSSVAMACWA
Trigger: GGCCCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCATAAGCTCATGGCCAGGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp AGCTCTCCAGGCCAAAGTGCTTCGCTAGTGGCTGCGTaGACCCATCTCTCACCCGGTACCACTGAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SSPGQSASLVAA*THLSPGTTEAS
Trigger: AGAAGCCTCAGTGGTACCGGGTGAGAGATGGGTCCACGCAGCCACTAGCGAAGCACTTTGGCCTGGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS CCA 72 bp CCATCAAGTCTCTGCAACAGCGGCTTTCCACCAGAGTaGACTTGGCAGGGCTGGGGGACGTCCCAAATCCCA +
Preference number: 6 (lower is better)
Translates to: PSSLCNSGFPPE*TWQGWGTSQIP
Trigger: TGGGATTTGGGACGTCCCCCAGCCCTGCCAAGTCCACTCTGGTGGAAAGCCGCTGTTGCAGAGACTTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GGGATTGATCTCGGAAGATCCGCATCAAGGCCACCATaGACACAGCGGGGTAGAACTCGTCCAGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: GIDLGRSASRPP*TQRGRTRPGAG
Trigger: ACCTGCCCCTGGACGAGTTCTACCCCGCTGTGTCCATGGTGGCCTTGATGCGGATCTTCCGAGATCAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CTGCCATGGCAGTCAGCTCTGCATCCAGCAGGTCCCTaGCCTTGTCAATGCACTGCTGGGCCAAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LPWQSALHPAGP*PCQCTAGPRRR
Trigger: TCTTCTCCTTGGCCCAGCAGTGCATTGACAAGGCCAGGGACCTGCTGGATGCAGAGCTGACTGCCATGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CGAAGGGCCGCTACAGCGCCTTCCCGGATGGCCTGCTaGGGGTCCCACACAGCCACAAAAATGTTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: RRAATAPSRMAC*GSHTATKMLSK
Trigger: CTTTGACAACATTTTTGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGGAAGGCGCTGTAGCGGCCCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS CAA 72 bp GTGTCACAGTGGGGCACCCAGCCAATGAGGCCCGAGTaGGTGGACAGAGGGATGACAGCGTATCTCTGGATG +
Preference number: 6 (lower is better)
Translates to: VSQWGTQPMRPE*VDRGMTAYLWM
Trigger: CATCCAGAGATACGCTGTCATCCCTCTGTCCACCAACTCGGGCCTCATTGGCTGGGTGCCCCACTGTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp AAGGGCGTGATGTGCCGAGGCTTGGTCCCGAAGCCCATGAGGTCTTaGCAGTACTTGTCATGCACCAGCTGCTGCTGGGTGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: KGVMCRGLVPKPMRS*QYLSCTSCCWVISS
Trigger: GGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCATGGGCTTCGGGACCAAGCCTCGGCACATCACGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GGCTGCACAGCCTGGAAACTGGTGAAGGGCGTGATGTGCCGAGGCTaGGTCCCGAAGCCCATGAGGTCTTTGCAGTACTTGTCATGCACC +
Preference number: 6 (lower is better)
Translates to: GCTAWKLVKGVMCRG*VPKPMRSLQYLSCT
Trigger: GGTGCATGACAAGTACTGCAAAGACCTCATGGGCTTCGGGACCAAGCCTCGGCACATCACGCCCTTCACCAGTTTCCAGGCTGTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GAAGGTGATGGCCTGCACCACCATGGTGTGGTGGTGAGAGAGGGATaGATCTCGGAAGATCCGCATCAAGGCCACCATGGACACAGCGGG +
Preference number: 6 (lower is better)
Translates to: EGDGLHHHGVVVREG*ISEDPHQGHHGHSG
Trigger: CCCGCTGTGTCCATGGTGGCCTTGATGCGGATCTTCCGAGATCAATCCCTCTCTCACCACCACACCATGGTGGTGCAGGCCATCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp CGAGGCAGCGCATTCGGCCCAGCATCAGCTCCGGGTCTTCCTTGTTaGTGTCCATCTTCTTGTCGTAGGCCACGAGAGCATCCTCCCACT +
Preference number: 6 (lower is better)
Translates to: RGSAFGPASAPGLPC*CPSSCRRPREHPPT
Trigger: AGTGGGAGGATGCTCTCGTGGCCTACGACAAGAAGATGGACACAAACAAGGAAGACCCGGAGCTGATGCTGGGCCGAATGCGCTGCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GCATGCAGTGTGTCACAGTGGGGCACCCAGCCAATGAGGCCCGAGTaGGTGGACAGAGGGATGACAGCGTATCTCTGGATGCTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: ACSVSQWGTQPMRPE*VDRGMTAYLWMLRF
Trigger: GAACCTCAGCATCCAGAGATACGCTGTCATCCCTCTGTCCACCAACTCGGGCCTCATTGGCTGGGTGCCCCACTGTGACACACTGCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp TCGCCAGGCGGCCAATGGCCTTGGACGCCATTTCCATaGCAACTGGATCGCTTGAGGGGAGGAGGTTTCGAA +
Preference number: 6 (lower is better)
Translates to: SPGGQWPWTPFP*QLDRLRGGGFE
Trigger: TTCGAAACCTCCTCCCCTCAAGCGATCCAGTTGTCATGGAAATGGCGTCCAAGGCCATTGGCCGCCTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS TCA 72 bp AGGGCTGAACTTGCTGGAAGAAGAAGGTGGGGACACTaGTGGCCAGCTCACGGAGAACGAGGACAGCGGCAT +
Preference number: 6 (lower is better)
Translates to: RAELAGRRRWGH*WPAHGERGQRH
Trigger: ATGCCGCTGTCCTCGTTCTCCGTGAGCTGGCCATCAGTGTCCCCACCTTCTTCTTCCAGCAAGTTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS TCA 72 bp GGGCCTGGAACGCCGCAGTCCGTTCCTTCTCCTTCTTaGCACAGCTCAGGACATGGTTCATGGTGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: GPGTPQSVPSPS*HSSGHGSWCPG
Trigger: TCCAGGACACCATGAACCATGTCCTGAGCTGTGTCAAGAAGGAGAAGGAACGGACTGCGGCGTTCCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp CAGAGGAATCCTGACTTGACTTGGACTCTGACAGGCTaGCAGCGGAAGCGTCCCGGGACTGGTCGATCATGC +
Preference number: 6 (lower is better)
Translates to: QRNPDLTWTLTG*QRKRPGTGRSC
Trigger: GCATGATCGACCAGTCCCGGGACGCTTCCGCTGTCAGCCTGTCAGAGTCCAAGTCAAGTCAGGATTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp GCAGTGGTGGCATTGGTGATGTTGGCCCCGCTGGCATaGCGCAGCTTCTTCTTCTCATCACGGGCTTGGTTC +
Preference number: 6 (lower is better)
Translates to: AVVALVMLAPLA*RSFFFSSRAWF
Trigger: GAACCAAGCCCGTGATGAGAAGAAGAAGCTGCGTCATGCCAGCGGGGCCAACATCACCAATGCCACCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GAGGTACTGGGTATCTGTGAAGGCGGACGGTCGGAATaGAGCCAGGCGGGGCAGCAGGTTAAGGATTGTCAT +
Preference number: 6 (lower is better)
Translates to: EVLGICEGGRSE*SQAGQQVKDCH
Trigger: ATGACAATCCTTAACCTGCTGCCCCGCCTGGCTGCATTCCGACCGTCCGCCTTCACAGATACCCAGTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CTTGATGTCCTGCTGGATGCCCGGCCCCATTGCTCGTaGCAACATGCTGATGCACGTGAATACGGTGGCATC +
Preference number: 6 (lower is better)
Translates to: LDVLLDARPHCS*QHADAREYGGI
Trigger: GATGCCACCGTATTCACGTGCATCAGCATGTTGGCACGAGCAATGGGGCCGGGCATCCAGCAGGACATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CAGCTCCTTGATGTCCTGCTGGATGCCCGGCCCCATTaGTCGTGCCAACATGCTGATGCACGTGAATACGGT +
Preference number: 6 (lower is better)
Translates to: QLLDVLLDARPH*SCQHADAREYG
Trigger: ACCGTATTCACGTGCATCAGCATGTTGGCACGAGCAATGGGGCCGGGCATCCAGCAGGACATCAAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CGGGCGCTCTGCTCCTTGATTCTCCCAATGCCGCTGTaGTCCAGCTCTGTCAGGATCTGGATGAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: RALCSLILPMPL*SSSVRIWMSIL
Trigger: CAAGATGCTCATCCAGATCCTGACAGAGCTGGAGCACAGCGGCATTGGGAGAATCAAGGAGCAGAGCGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GAAGGGCCGCTACAGCGCCTTCCCGGATGGCCTGCTTaGGGTCCCACACAGCCACAAAAATGTTGTCAAAGA +
Preference number: 6 (lower is better)
Translates to: EGPLQRLPGWPA*GPTQPQKCCQR
Trigger: TCTTTGACAACATTTTTGTGGCTGTGTGGGACCCCAAGCAGGCCATCCGGGAAGGCGCTGTAGCGGCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS CCA 72 bp GCAGCCAGGCGGGGCAGCAGGTTAAGGATTGTCATCTaGATCAGCGAGTTCTTGCTGCTCCTGCACTTCAGC +
Preference number: 6 (lower is better)
Translates to: AARRGSRLRIVI*ISEFLLLLHFS
Trigger: GCTGAAGTGCAGGAGCAGCAAGAACTCGCTGATCCAGATGACAATCCTTAACCTGCTGCCCCGCCTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CACTGCCCTGTAAAAGGCTCCATCGTGGGTGTCCCGTaGGATCATGCAGGTGTACTCCTCCATGCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: HCPVKGSIVGVP*DHAGVLLHAVP
Trigger: TGGGACAGCATGGAGGAGTACACCTGCATGATCCCACGGGACACCCACGATGGAGCCTTTTACAGGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CATGCCAAGCCTTGTACCAGCTGCGGTCATGCTCTGTaGCGGCACTGTAGTACTGTAGCACCTTGGGGATGG +
Preference number: 6 (lower is better)
Translates to: HAKPCTSCGHAL*RHCSTVAPWGW
Trigger: CCATCCCCAAGGTGCTACAGTACTACAGTGCCGCCACAGAGCATGACCGCAGCTGGTACAAGGCTTGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp GGCTTGGTCCCGAAGCCCATGAGGTCTTTGCAGTACTaGTCATGCACCAGCTGCTGCTGGGTGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GLVPKPMRSLQY*SCTSCCWVISS
Trigger: GGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCATGGGCTTCGGGACCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp ATGTGCCGAGGCTTGGTCCCGAAGCCCATGAGGTCTTaGCAGTACTTGTCATGCACCAGCTGCTGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: MCRGLVPKPMRS*QYLSCTSCCWV
Trigger: CACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCATGGGCTTCGGGACCAAGCCTCGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp GCCTGGAAACTGGTGAAGGGCGTGATGTGCCGAGGCTaGGTCCCGAAGCCCATGAGGTCTTTGCAGTACTTG +
Preference number: 6 (lower is better)
Translates to: AWKLVKGVMCRG*VPKPMRSLQYL
Trigger: CAAGTACTGCAAAGACCTCATGGGCTTCGGGACCAAGCCTCGGCACATCACGCCCTTCACCAGTTTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp GGCCTGCACCACCATGGTGTGGTGGTGAGAGAGGGATaGATCTCGGAAGATCCGCATCAAGGCCACCATGGA +
Preference number: 6 (lower is better)
Translates to: GLHHHGVVVREG*ISEDPHQGHHG
Trigger: TCCATGGTGGCCTTGATGCGGATCTTCCGAGATCAATCCCTCTCTCACCACCACACCATGGTGGTGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp TGGGGCAGGAACTGCACACACTTGAGCCCCAGGGACTaGAAGATGAAGGTGATGGCCTGCACCACCATGGTG +
Preference number: 6 (lower is better)
Translates to: WGRNCTHLSPRD*KMKVMACTTMV
Trigger: CACCATGGTGGTGCAGGCCATCACCTTCATCTTCAAGTCCCTGGGGCTCAAGTGTGTGCAGTTCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp TGGATCGCGGCTAACAGCTTGATGGAGACGATTCGGCCTTGGCTGTaGTCATGCATGAAGACCCGCAGCATGTGTGGGATCAACTGGGGC +
Preference number: 6 (lower is better)
Translates to: WIAANSLMETIRPWL*SCMKTRSMCGINWG
Trigger: GCCCCAGTTGATCCCACACATGCTGCGGGTCTTCATGCATGACAACAGCCAAGGCCGAATCGTCTCCATCAAGCTGTTAGCCGCGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GCGTATTCCAACACCCCAGAAGCTGCCTCAGGCTGCTGGAGCTTGTaGTTAATGCTGATGAGGGACTCAAGTATGGCAGGCGTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: AYSNTPEAASGCWSL*LMLMRDSSMAGVGP
Trigger: AGGGCCCACGCCTGCCATACTTGAGTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTCTGGGGTGTTGGAATACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp GGTCAGGATCTGTTATGCCAACCACAAGCAGCTTGCTaGGCACATCTGCCACCACCTGCACTGCAGTCTGGC +
Preference number: 6 (lower is better)
Translates to: GQDLLCQPQAAC*AHLPPPALQSG
Trigger: GCCAGACTGCAGTGCAGGTGGTGGCAGATGTGCTCAGCAAGCTGCTTGTGGTTGGCATAACAGATCCTGACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GGGATGGTGCTCTCGTTGATGCCCTGGAGGTTCAGCTaGCACTCCCCAAGTTTCAGAAAACACCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: GMVLSLMPWRFS*HSPSFRKHLAM
Trigger: CATGGCCAGGTGTTTTCTGAAACTTGGGGAGTGGCAGCTGAACCTCCAGGGCATCAACGAGAGCACCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TCTCACCCGGTACCACTGAGGCTTCTGCATTTCCTTTaGTTCCCGCTGCGTGGTGAGAATCAGACAGGCACG +
Preference number: 6 (lower is better)
Translates to: SHPVPLRLLHFL*FPLRGENQTGT
Trigger: CGTGCCTGTCTGATTCTCACCACGCAGCGGGAACCAAAGGAAATGCAGAAGCCTCAGTGGTACCGGGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057580.8
CDS CCA 72 bp TGTGTGCCGGTACCACTGAGGCTTCTGCATTTCCTTTaGTTCCCGCTGCGTGGTGAGAATCAGACAGGCACG +
Preference number: 6 (lower is better)
Translates to: CVPVPLRLLHFL*FPLRGENQTGT
Trigger: CGTGCCTGTCTGATTCTCACCACGCAGCGGGAACCAAAGGAAATGCAGAAGCCTCAGTGGTACCGGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CTCCCAATGCCGCTGTGCTCCAGCTCTGTCAGGATCTaGATGAGCATCTTGCGCAGGAAAGGCATGACGAAG +
Preference number: 6 (lower is better)
Translates to: LPMPLCSSSVRI*MSILRRKGMTK
Trigger: CTTCGTCATGCCTTTCCTGCGCAAGATGCTCATCCAGATCCTGACAGAGCTGGAGCACAGCGGCATTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CAGACTCGGATGACATTAAGGAATGTGGGCATGACCTaGGGCAGGAACTGCACACACTTGAGCCCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: QTRMTLRNVGMT*GRNCTHLSPRD
Trigger: GTCCCTGGGGCTCAAGTGTGTGCAGTTCCTGCCCCAGGTCATGCCCACATTCCTTAATGTCATCCGAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp AGGTGGCCTGGATCTCCAGCTCTCCGAAGTGTTTCATaGCGTATTCCAACACCCCAGAAGCTGCCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: RWPGSPALRSVS*RIPTPQKLPQA
Trigger: AGCCTGAGGCAGCTTCTGGGGTGTTGGAATACGCCATGAAACACTTCGGAGAGCTGGAGATCCAGGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp AATGTGGGCATGACCTGGGGCAGGAACTGCACACACTaGAGCCCCAGGGACTTGAAGATGAAGGTGATGGCC +
Preference number: 6 (lower is better)
Translates to: NVGMTWGRNCTH*SPRDLKMKVMA
Trigger: GGCCATCACCTTCATCTTCAAGTCCCTGGGGCTCAAGTGTGTGCAGTTCCTGCCCCAGGTCATGCCCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp AGAAAACACCTGGCCATGAGCTTATGCAGCTCCTGCTaGTGCTGCTGGTCCTCTGTGGCGATGGCATGCTGG +
Preference number: 6 (lower is better)
Translates to: RKHLAMSLCSSC*CCWSSVAMACW
Trigger: CCAGCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCATAAGCTCATGGCCAGGTGTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp GGCACAGCCAACTCAAGGTCTCGGCACATCAGAAGTTaGGGGGACACATACTGCAGCTCCAGGGATGTGAGC +
Preference number: 6 (lower is better)
Translates to: GTANSRSRHIRS*GDTYCSSRDVS
Trigger: GCTCACATCCCTGGAGCTGCAGTATGTGTCCCCCAAACTTCTGATGTGCCGAGACCTTGAGTTGGCTGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp ATGTGCCGAGGCTTGGTCCCGAAGCCCATGAGGTCTTTGCAGTACTaGTCATGCACCAGCTGCTGCTGGGTGATCTCCTCCATCTCTTCT +
Preference number: 6 (lower is better)
Translates to: MCRGLVPKPMRSLQY*SCTSCCWVISSISS
Trigger: AGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCATGGGCTTCGGGACCAAGCCTCGGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp CCAATGCCGCTGTGCTCCAGCTCTGTCAGGATCTGGATGAGCATCTaGCGCAGGAAAGGCATGACGAAGGCTGGGTTCATGCTGCTTAGT +
Preference number: 6 (lower is better)
Translates to: PMPLCSSSVRIWMSI*RRKGMTKAGFMLLS
Trigger: ACTAAGCAGCATGAACCCAGCCTTCGTCATGCCTTTCCTGCGCAAGATGCTCATCCAGATCCTGACAGAGCTGGAGCACAGCGGCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp ACATTAAGGAATGTGGGCATGACCTGGGGCAGGAACTGCACACACTaGAGCCCCAGGGACTTGAAGATGAAGGTGATGGCCTGCACCACC +
Preference number: 6 (lower is better)
Translates to: TLRNVGMTWGRNCTH*SPRDLKMKVMACTT
Trigger: GGTGGTGCAGGCCATCACCTTCATCTTCAAGTCCCTGGGGCTCAAGTGTGTGCAGTTCCTGCCCCAGGTCATGCCCACATTCCTTAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp ATGGCGTATTCCAACACCCCAGAAGCTGCCTCAGGCTGCTGGAGCTaGTTGTTAATGCTGATGAGGGACTCAAGTATGGCAGGCGTGGGC +
Preference number: 6 (lower is better)
Translates to: MAYSNTPEAASGCWS*LLMLMRDSSMAGVG
Trigger: GCCCACGCCTGCCATACTTGAGTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTCTGGGGTGTTGGAATACGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp TATGTTCCTGGCACAGCCAACTCAAGGTCTCGGCACATCAGAAGTTaGGGGGACACATACTGCAGCTCCAGGGATGTGAGCTGGGGTAGC +
Preference number: 6 (lower is better)
Translates to: YVPGTANSRSRHIRS*GDTYCSSRDVSWGS
Trigger: GCTACCCCAGCTCACATCCCTGGAGCTGCAGTATGTGTCCCCCAAACTTCTGATGTGCCGAGACCTTGAGTTGGCTGTGCCAGGAACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp TCGTCCACCCACTTCCGCATTTCCAGGCCGCTCACCTaGGCCAGTTCTCCTATAGTGGCCAACACGTTATTG +
Preference number: 6 (lower is better)
Translates to: SSTHFRISRPLT*ASSPIVANTLL
Trigger: CAATAACGTGTTGGCCACTATAGGAGAACTGGCTCAGGTGAGCGGCCTGGAAATGCGGAAGTGGGTGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp AGGCTTGCGTACTTGAGCCAGGTTCTCATGTCCTCATaGGGGCTGACCACAAGGGACCGGACCATGAGGATT +
Preference number: 6 (lower is better)
Translates to: RLAYLSQVLMSS*GLTTRDRTMRI
Trigger: AATCCTCATGGTCCGGTCCCTTGTGGTCAGCCCTCATGAGGACATGAGAACCTGGCTCAAGTACGCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp TGTAGTACTGTAGCACCTTGGGGATGGTGCTCTCGTTaGTGCCCTGGAGGTTCAGCTGCCACTCCCCAAGTT +
Preference number: 6 (lower is better)
Translates to: CSTVAPWGWCSR*CPGGSAATPQV
Trigger: AACTTGGGGAGTGGCAGCTGAACCTCCAGGGCATCAACGAGAGCACCATCCCCAAGGTGCTACAGTACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp TCAACAGGATCTTCTTCTTCTCTCTGTAGTCCCGGATaGGGGCATGCAGTGTGTCACAGTGGGGCACCCAGC +
Preference number: 6 (lower is better)
Translates to: STGSSSSLCSPG*GHAVCHSGAPS
Trigger: GCTGGGTGCCCCACTGTGACACACTGCATGCCCTCATCCGGGACTACAGAGAGAAGAAGAAGATCCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CTGCCTCTTGTGGGCAAAGTCCTTTGGAGGAAGCGCTaGTCGGATGATGTCAAGTACACGGGGCAAGTAGAC +
Preference number: 6 (lower is better)
Translates to: LPLVGKVLWRKR*SDDVKYTGQVD
Trigger: GTCTACTTGCCCCGTGTACTTGACATCATCCGAGCAGCGCTTCCTCCAAAGGACTTTGCCCACAAGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CACGTGAATACGGTGGCATCCACCTGCACGGTTTTCTaGCTCTTGTGGGCAAAGTCCTTTGGAGGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: HVNTVASTCTVF*LLWAKSFGGSA
Trigger: AGCGCTTCCTCCAAAGGACTTTGCCCACAAGAGGCAGAAAACCGTGCAGGTGGATGCCACCGTATTCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp ATGTGGCTCTTCACAAAGGACACCAGCATCCCCAGCTaGTGGAACAGAAATTCCCGGATGGCCCCATCACAG +
Preference number: 6 (lower is better)
Translates to: MWLFTKDTSIPS*WNRNSRMAPSQ
Trigger: CTGTGATGGGGCCATCCGGGAATTTCTGTTCCAGCAGCTGGGGATGCTGGTGTCCTTTGTGAAGAGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GAACTCCAGTTCTTTGTAGTGCAGTGCTTTGGCATATaGCCGGCACTTGGCAGCTCTCTCACCCAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: ELQFFVVQCFGI*PALGSSLTQEH
Trigger: GTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAGAACTGGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GGGCCCTTTCTGGAACTCCAGTTCTTTGTAGTGCAGTaGTTTGGCATATGCCCGGCACTTGGCAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: GPFLELQFFVVQ*FGICPALGSSL
Trigger: GAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAGAACTGGAGTTCCAGAAAGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TGTAAAAGGCTCCATCGTGGGTGTCCCGTGGGATCATaGAGGTGTACTCCTCCATGCTGTCCCACTGACCTA +
Preference number: 6 (lower is better)
Translates to: CKRLHRGCPVGS*RCTPPCCPTDL
Trigger: TAGGTCAGTGGGACAGCATGGAGGAGTACACCTGCATGATCCCACGGGACACCCACGATGGAGCCTTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp AGCAAGAGCCAGTCTGCCACTCTTGCCACACAGGCTTaGGTACTTGAGCCAGGTTCTCATGTCCTCATGAGG +
Preference number: 6 (lower is better)
Translates to: SKSQSATLATQA*VLEPGSHVLMR
Trigger: CCTCATGAGGACATGAGAACCTGGCTCAAGTACGCAAGCCTGTGTGGCAAGAGTGGCAGACTGGCTCTTGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TTCAGAAAACACCTGGCCATGAGCTTATGCAGCTCCTaGTTGTGCTGCTGGTCCTCTGTGGCGATGGCATGC +
Preference number: 6 (lower is better)
Translates to: FRKHLAMSLCSS*LCCWSSVAMAC
Trigger: GCATGCCATCGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCATAAGCTCATGGCCAGGTGTTTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TCCCCAAGTTTCAGAAAACACCTGGCCATGAGCTTATaGAGCTCCTGCTTGTGCTGCTGGTCCTCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: SPSFRKHLAMSL*SSCLCCWSSVA
Trigger: CGCCACAGAGGACCAGCAGCACAAGCAGGAGCTGCATAAGCTCATGGCCAGGTGTTTTCTGAAACTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CGAGATGCCTCTTCCAGGCCTTCATGCCACATCTCATaGCAGAGGATGGCTACCCGAATCAGCTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: RDASSRPSCHIS*QRMATRISSSL
Trigger: GAGTGAAGAGCTGATTCGGGTAGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GTTGAAAGACAAGCGAAGACAGAGTGTCCATGGCTGTaGAGCGCAGCTCTGGGCTCTGGTCTAGCGTACGAA +
Preference number: 6 (lower is better)
Translates to: VERQAKTECPWL*SAALGSGLAYE
Trigger: TTCGTACGCTAGACCAGAGCCCAGAGCTGCGCTCCACAGCCATGGACACTCTGTCTTCGCTTGTCTTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CTTTGTAGTGCAGTGCTTTGGCATATGCCCGGCACTTaGCAGCTCTCTCACCCAGGAGCACGATGCCATTGT +
Preference number: 6 (lower is better)
Translates to: LCSAVLWHMPGT*QLSHPGARCHC
Trigger: ACAATGGCATCGTGCTCCTGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CACGCTGCAGCAGCAGCCATCCGGGCCATCTTAGCCTaGGTCTCATCATTAACCAGAGTCCACTTTTCACAG +
Preference number: 6 (lower is better)
Translates to: HAAAAAIRAILA*VSSLTRVHFSQ
Trigger: CTGTGAAAAGTGGACTCTGGTTAATGATGAGACCCAGGCTAAGATGGCCCGGATGGCTGCTGCTGCAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CCCGAGTTGGTGGACAGAGGGATGACAGCGTATCTCTaGATGCTGAGGTTCTTGCGAAGAGAAGTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: PELVDRGMTAYL*MLRFLRREVGS
Trigger: TGACCCCACTTCTCTTCGCAAGAACCTCAGCATCCAGAGATACGCTGTCATCCCTCTGTCCACCAACTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CTGTGCTCCAGCTCTGTCAGGATCTGGATGAGCATCTaGCGCAGGAAAGGCATGACGAAGGCTGGGTTCATG +
Preference number: 6 (lower is better)
Translates to: LCSSSVRIWMSI*RRKGMTKAGFM
Trigger: CATGAACCCAGCCTTCGTCATGCCTTTCCTGCGCAAGATGCTCATCCAGATCCTGACAGAGCTGGAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp GCATTCGGCCCAGCATCAGCTCCGGGTCTTCCTTGTTaGTGTCCATCTTCTTGTCGTAGGCCACGAGAGCAT +
Preference number: 6 (lower is better)
Translates to: AFGPASAPGLPC*CPSSCRRPREH
Trigger: ATGCTCTCGTGGCCTACGACAAGAAGATGGACACAAACAAGGAAGACCCGGAGCTGATGCTGGGCCGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp ATGCTGGGCCTGCTGCTGCATGGTCTGCACAAAGTGTaGCATGTGCTGGAAGGCGTCAATCTTCCGAGCACT +
Preference number: 6 (lower is better)
Translates to: MLGLLLHGLHKV*HVLEGVNLPST
Trigger: AGTGCTCGGAAGATTGACGCCTTCCAGCACATGCAACACTTTGTGCAGACCATGCAGCAGCAGGCCCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp AGCCACAGTAGCTTGGCCAGGTCGTCCCCAGCTGTGTaGTTGACAGCATGCTCAAACACCTCTACCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SHSSLARSSPAV*LTACSNTSTFC
Trigger: GCAGAAGGTAGAGGTGTTTGAGCATGCTGTCAACAACACAGCTGGGGACGACCTGGCCAAGCTACTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp TCCCACCAGATCTGCCGGATGATCTCCCGACGCTCAGGGACAAGTTaGTACTGGATAACCTCTTCCAGCTCGGACAGCATGTGGCAAGAA +
Preference number: 6 (lower is better)
Translates to: SHQICRMISRRSGTS*YWITSSSSDSMWQE
Trigger: TTCTTGCCACATGCTGTCCGAGCTGGAAGAGGTTATCCAGTACAAACTTGTCCCTGAGCGTCGGGAGATCATCCGGCAGATCTGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp CTTTGCAGTACTTGTCATGCACCAGCTGCTGCTGGGTaGTCTCCTCCATCTCTTCTCTCAGACGCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: LCSTCHAPAAAG*SPPSLLSDALP
Trigger: AGGGAGAGCGTCTGAGAGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp CGGGGTAGAACTCGTCCAGGGGCAGGTTTCCCATGTTaGCCAGCATTTCACTGGTGCTGTAGTCAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: RGRTRPGAGFPC*PAFHWCCSQRN
Trigger: ATTCCTCTGACTACAGCACCAGTGAAATGCTGGTCAACATGGGAAACCTGCCCCTGGACGAGTTCTACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp GCAGTGGGTCATAGACAAAGGCTTCCAGCACAGCCATaGCACTGTCCTTGTGTTCCCGGAGCACTTCCATCA +
Preference number: 6 (lower is better)
Translates to: AVGHRQRLPAQP*HCPCVPGALPS
Trigger: TGATGGAAGTGCTCCGGGAACACAAGGACAGTGTCATGGCTGTGCTGGAAGCCTTTGTCTATGACCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp AGCTTGATGGAGACGATTCGGCCTTGGCTGTTGTCATaGATGAAGACCCGCAGCATGTGTGGGATCAACTGG +
Preference number: 6 (lower is better)
Translates to: SLMETIRPWLLS*MKTRSMCGINW
Trigger: CCAGTTGATCCCACACATGCTGCGGGTCTTCATGCATGACAACAGCCAAGGCCGAATCGTCTCCATCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TCTCAACTGGTCCACTGGCCAGGGCATCTCCCTGGCTaGTCCTTAGCATTCGATGCTGGTAAATCAAAGGGT +
Preference number: 6 (lower is better)
Translates to: SQLVHWPGHLPG*SLAFDAGKSKG
Trigger: ACCCTTTGATTTACCAGCATCGAATGCTAAGGAGCAGCCAGGGAGATGCCCTGGCCAGTGGACCAGTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GCTCCCCAGGCCTTTTGGAGGTTGATGGTGCTGACATaGAGTTTCTTCATGGGTCCTGTCTCAACTGGTCCA +
Preference number: 6 (lower is better)
Translates to: APQAFWRLMVLT*SFFMGPVSTGP
Trigger: TGGACCAGTTGAGACAGGACCCATGAAGAAACTGCATGTCAGCACCATCAACCTCCAAAAGGCCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GCTACCCGAATCAGCTCTTCACTCACCATCATGGCCTaGTGGACCAGCGTGTTGCTGTGTTCACACATGTTC +
Preference number: 6 (lower is better)
Translates to: ATRISSSLTIMA*WTSVLLCSHMF
Trigger: GAACATGTGTGAACACAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAGTGAAGAGCTGATTCGGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CCAAAGTACAAGCGAGATGCCTCTTCCAGGCCTTCATaGCACATCTCATGCCAGAGGATGGCTACCCGAATC +
Preference number: 6 (lower is better)
Translates to: PKYKRDASSRPS*HISCQRMATRI
Trigger: GATTCGGGTAGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGCTTGTACTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GCCTTTCACGTTCCTCTCCCCAAAGTACAAGCGAGATaGCTCTTCCAGGCCTTCATGCCACATCTCATGCCA +
Preference number: 6 (lower is better)
Translates to: AFHVPLPKVQAR*LFQAFMPHLMP
Trigger: TGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGCTTGTACTTTGGGGAGAGGAACGTGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CATGGCCTTTCAGGAGGAAAACAAACTCATGCCCATTaGTGCCCATCAGAGTCAGCTTCCGAGGCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: HGLSGGKQTHAH*CPSESASEASA
Trigger: AGCAGAGGCCTCGGAAGCTGACTCTGATGGGCAGCAATGGGCATGAGTTTGTTTTCCTCCTGAAAGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GTCATAGCGACCTCAAAGCAGTCCCCAAAGTCAATGTaGAGGATCTTCCCACTCAGCCGGTCCAGCATCAGA +
Preference number: 6 (lower is better)
Translates to: VIATSKQSPKSM*RIFPLSRSSIR
Trigger: TCTGATGCTGGACCGGCTGAGTGGGAAGATCCTGCACATTGACTTTGGGGACTGCTTTGAGGTCGCTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CTGCACGGTTTTCTGCCTCTTGTGGGCAAAGTCCTTTaGAGGAAGCGCTGCTCGGATGATGTCAAGTACACG +
Preference number: 6 (lower is better)
Translates to: LHGFLPLVGKVL*RKRCSDDVKYT
Trigger: CGTGTACTTGACATCATCCGAGCAGCGCTTCCTCCAAAGGACTTTGCCCACAAGAGGCAGAAAACCGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp ACAAACAGAGCTTGTAAGTTTTCTGCCTGGGCCAGGTaGGCATCAAAGCGCTCGTCCAGGGATGCCAAGACA +
Preference number: 6 (lower is better)
Translates to: TNRACKFSAWAR*ASKRSSRDAKT
Trigger: TGTCTTGGCATCCCTGGACGAGCGCTTTGATGCCCACCTGGCCCAGGCAGAAAACTTACAAGCTCTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TTCAGAGCCACAAACAGAGCTTGTAAGTTTTCTGCCTaGGCCAGGTGGGCATCAAAGCGCTCGTCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: FRATNRACKFSA*ARWASKRSSRD
Trigger: ATCCCTGGACGAGCGCTTTGATGCCCACCTGGCCCAGGCAGAAAACTTACAAGCTCTGTTTGTGGCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp ATCGCGGCTAACAGCTTGATGGAGACGATTCGGCCTTaGCTGTTGTCATGCATGAAGACCCGCAGCATGTGT +
Preference number: 6 (lower is better)
Translates to: IAANSLMETIRP*LLSCMKTRSMC
Trigger: ACACATGCTGCGGGTCTTCATGCATGACAACAGCCAAGGCCGAATCGTCTCCATCAAGCTGTTAGCCGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TGTAGCACCTTGGGGATGGTGCTCTCGTTGATGCCCTaGAGGTTCAGCTGCCACTCCCCAAGTTTCAGAAAA +
Preference number: 6 (lower is better)
Translates to: CSTLGMVLSLMP*RFSCHSPSFRK
Trigger: TTTTCTGAAACTTGGGGAGTGGCAGCTGAACCTCCAGGGCATCAACGAGAGCACCATCCCCAAGGTGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GGCCTTCACCCCTTCCACCAAGGCTTCATTGACATCTaGCCAGTGACCATAATCAAACCACAGGGTGAGGAC +
Preference number: 6 (lower is better)
Translates to: GLHPFHQGFIDI*PVTIIKPQGED
Trigger: GTCCTCACCCTGTGGTTTGATTATGGTCACTGGCCAGATGTCAATGAAGCCTTGGTGGAAGGGGTGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CGCTCTCCCTCCATGCTGCTGATACGAACTAGCTCGTaGAGGATCAGCAAGGCTCCGTGGATTCGATCATCT +
Preference number: 6 (lower is better)
Translates to: RSPSMLLIRTSS*RISKAPWIRSS
Trigger: AGATGATCGAATCCACGGAGCCTTGCTGATCCTCAACGAGCTAGTTCGTATCAGCAGCATGGAGGGAGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp GCTAACAGCTTGATGGAGACGATTCGGCCTTGGCTGTaGTCATGCATGAAGACCCGCAGCATGTGTGGGATC +
Preference number: 6 (lower is better)
Translates to: ANSLMETIRPWL*SCMKTRSMCGI
Trigger: GATCCCACACATGCTGCGGGTCTTCATGCATGACAACAGCCAAGGCCGAATCGTCTCCATCAAGCTGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp ATCTGCCGGATGATCTCCCGACGCTCAGGGACAAGTTaGTACTGGATAACCTCTTCCAGCTCGGACAGCATG +
Preference number: 6 (lower is better)
Translates to: ICRMISRRSGTS*YWITSSSSDSM
Trigger: CATGCTGTCCGAGCTGGAAGAGGTTATCCAGTACAAACTTGTCCCTGAGCGTCGGGAGATCATCCGGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp GATCCGTCTGAACACGTGATAGTAGAGGTCCCAGGCTaGCGTGAGGTCCTTGACGTTCCCCGACTTCATGTA +
Preference number: 6 (lower is better)
Translates to: DPSEHVIVEVPG*REVLDVPRLHV
Trigger: TACATGAAGTCGGGGAACGTCAAGGACCTCACGCAAGCCTGGGACCTCTACTATCACGTGTTCAGACGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp TGGATGCTGAGGTTCTTGCGAAGAGAAGTGGGGTCATaGGCTAGGAGTGTGTTCACCAGGCCAAAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: WMLRFLRREVGS*ARSVFTRPKSC
Trigger: GCAGCTCTTTGGCCTGGTGAACACACTCCTAGCCAATGACCCCACTTCTCTTCGCAAGAACCTCAGCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CACAGTAGCTTGGCCAGGTCGTCCCCAGCTGTGTTGTaGACAGCATGCTCAAACACCTCTACCTTCTGCATC +
Preference number: 6 (lower is better)
Translates to: HSSLARSSPAVL*TACSNTSTFCI
Trigger: GATGCAGAAGGTAGAGGTGTTTGAGCATGCTGTCAACAACACAGCTGGGGACGACCTGGCCAAGCTACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GCGTATCTCTGGATGCTGAGGTTCTTGCGAAGAGAAGTGGGGTCATaGGCTAGGAGTGTGTTCACCAGGCCAAAGAGCTGCATCACTCGT +
Preference number: 6 (lower is better)
Translates to: AYLWMLRFLRREVGS*ARSVFTRPKSCITR
Trigger: ACGAGTGATGCAGCTCTTTGGCCTGGTGAACACACTCCTAGCCAATGACCCCACTTCTCTTCGCAAGAACCTCAGCATCCAGAGATACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GGGCTTTTTAGCCACAGTAGCTTGGCCAGGTCGTCCCCAGCTGTGTaGTTGACAGCATGCTCAAACACCTCTACCTTCTGCATCAACGTC +
Preference number: 6 (lower is better)
Translates to: GLFSHSSLARSSPAV*LTACSNTSTFCINV
Trigger: GACGTTGATGCAGAAGGTAGAGGTGTTTGAGCATGCTGTCAACAACACAGCTGGGGACGACCTGGCCAAGCTACTGTGGCTAAAAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp GGCCTTGGACGCCATTTCCATGACAACTGGATCGCTTaGGGGGAGGAGGTTTCGAAGGTAGTTGGCAAATCT +
Preference number: 6 (lower is better)
Translates to: GLGRHFHDNWIA*GEEVSKVVGKS
Trigger: AGATTTGCCAACTACCTTCGAAACCTCCTCCCCTCAAGCGATCCAGTTGTCATGGAAATGGCGTCCAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS TCA 72 bp ACAGTAGCTTGGCCAGGTCGTCCCCAGCTGTGTTGTTaGCAGCATGCTCAAACACCTCTACCTTCTGCATCA +
Preference number: 6 (lower is better)
Translates to: TVAWPGRPQLCC*QHAQTPLPSAS
Trigger: TGATGCAGAAGGTAGAGGTGTTTGAGCATGCTGTCAACAACACAGCTGGGGACGACCTGGCCAAGCTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp ATGAGGTCTTTGCAGTACTTGTCATGCACCAGCTGCTaGTGGGTGATCTCCTCCATCTCTTCTCTCAGACGC +
Preference number: 6 (lower is better)
Translates to: MRSLQYLSCTSC*WVISSISSLRR
Trigger: GCGTCTGAGAGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp ATGGCGTATTCCAACACCCCAGAAGCTGCCTCAGGCTaGTGGAGCTTGTTGTTAATGCTGATGAGGGACTCA +
Preference number: 6 (lower is better)
Translates to: MAYSNTPEAASG*WSLLLMLMRDS
Trigger: TGAGTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTCTGGGGTGTTGGAATACGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GCCAATGTAGCACTGGCAGAGGTTCTCGTGAGATGTTaGCTGCTTGATAAGCAGCTCCACTTGGGTTGGAAC +
Preference number: 6 (lower is better)
Translates to: ANVALAEVLVRC*LLDKQLHLGWN
Trigger: GTTCCAACCCAAGTGGAGCTGCTTATCAAGCAGGCAACATCTCACGAGAACCTCTGCCAGTGCTACATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp AGGTCTTTGCAGTACTTGTCATGCACCAGCTGCTGCTaGGTGATCTCCTCCATCTCTTCTCTCAGACGCTCT +
Preference number: 6 (lower is better)
Translates to: RSLQYLSCTSCC*VISSISSLRRS
Trigger: AGAGCGTCTGAGAGAAGAGATGGAGGAGATCACCCAGCAGCAGCTGGTGCATGACAAGTACTGCAAAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CTTTCTGGAACTCCAGTTCTTTGTAGTGCAGTGCTTTaGCATATGCCCGGCACTTGGCAGCTCTCTCACCCA +
Preference number: 6 (lower is better)
Translates to: LSGTPVLCSAVL*HMPGTWQLSHP
Trigger: TGGGTGAGAGAGCTGCCAAGTGCCGGGCATATGCCAAAGCACTGCACTACAAAGAACTGGAGTTCCAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GCGTATTCCAACACCCCAGAAGCTGCCTCAGGCTGCTaGAGCTTGTTGTTAATGCTGATGAGGGACTCAAGT +
Preference number: 6 (lower is better)
Translates to: AYSNTPEAASGC*SLLLMLMRDSS
Trigger: ACTTGAGTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTCTGGGGTGTTGGAATACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp ACCCGAATCAGCTCTTCACTCACCATCATGGCCTGCTaGACCAGCGTGTTGCTGTGTTCACACATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: TRISSSLTIMAC*TSVLLCSHMFF
Trigger: GAAGAACATGTGTGAACACAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAGTGAAGAGCTGATTCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp AATGCGAATGATTGGCTGGTTGGGGTCGTATGTTCCTaGCACAGCCAACTCAAGGTCTCGGCACATCAGAAG +
Preference number: 6 (lower is better)
Translates to: NANDWLVGVVCS*HSQLKVSAHQK
Trigger: CTTCTGATGTGCCGAGACCTTGAGTTGGCTGTGCCAGGAACATACGACCCCAACCAGCCAATCATTCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp TCCAACACCCCAGAAGCTGCCTCAGGCTGCTGGAGCTaGTTGTTAATGCTGATGAGGGACTCAAGTATGGCA +
Preference number: 6 (lower is better)
Translates to: SNTPEAASGCWS*LLMLMRDSSMA
Trigger: TGCCATACTTGAGTCCCTCATCAGCATTAACAACAAGCTCCAGCAGCCTGAGGCAGCTTCTGGGGTGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp TGCAGGATCTTCCCACTCAGCCGGTCCAGCATCAGATaGGATGGGTGCCTGTCTCCAAGGCCTAAAATGTAT +
Preference number: 6 (lower is better)
Translates to: CRIFPLSRSSIR*DGCLSPRPKMY
Trigger: ATACATTTTAGGCCTTGGAGACAGGCACCCATCCAATCTGATGCTGGACCGGCTGAGTGGGAAGATCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp CTTCCGAGCACTTTTCCACATGTTCTTCATGTAGGCATAGGTCACTaGAGGGTGAGCGGTTGGCAGAGGATGGTCAAGTTGCCGAGATGG +
Preference number: 6 (lower is better)
Translates to: LPSTFPHVLHVGIGH*RVSGWQRMVKLPRW
Trigger: CCATCTCGGCAACTTGACCATCCTCTGCCAACCGCTCACCCTCAAGTGACCTATGCCTACATGAAGAACATGTGGAAAAGTGCTCGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp AGGCCTCTGCTTGGATGTGATGACTTGCAAAGACGGGGCTATGGATaGAATGCGAATGATTGGCTGGTTGGGGTCGTATGTTCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: RPLLGCDDLQRRGYG*NANDWLVGVVCSWH
Trigger: GTGCCAGGAACATACGACCCCAACCAGCCAATCATTCGCATTCAATCCATAGCCCCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GCCCATCAGAGTCAGCTTCCGAGGCCTCTGCTTGGATGTGATGACTaGCAAAGACGGGGCTATGGATTGAATGCGAATGATTGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: AHQSQLPRPLLGCDD*QRRGYGLNANDWLV
Trigger: AACCAGCCAATCATTCGCATTCAATCCATAGCCCCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCTCGGAAGCTGACTCTGATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp CTTTTTAGCCACAGTAGCTTGGCCAGGTCGTCCCCAGCTGTGTTGTaGACAGCATGCTCAAACACCTCTACCTTCTGCATCAACGTCAGG +
Preference number: 6 (lower is better)
Translates to: LFSHSSLARSSPAVL*TACSNTSTFCINVR
Trigger: CCTGACGTTGATGCAGAAGGTAGAGGTGTTTGAGCATGCTGTCAACAACACAGCTGGGGACGACCTGGCCAAGCTACTGTGGCTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp CGTCCAAAATTTCTACTGACTGGCCGGCAGAGTAGGAGTCTGTCCTaGTCCGGGACCGCTTATTGCCTTTGGTATTTGTGTCCATCAGCC +
Preference number: 6 (lower is better)
Translates to: RPKFLLTGRQSRSLS*SGTAYCLWYLCPSA
Trigger: GGCTGATGGACACAAATACCAAAGGCAATAAGCGGTCCCGGACAAGGACAGACTCCTACTCTGCCGGCCAGTCAGTAGAAATTTTGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp TCTCTCAGACGCTCTCCCTCCATGCTGCTGATACGAACTAGCTCGTaGAGGATCAGCAAGGCTCCGTGGATTCGATCATCTCGATTCATA +
Preference number: 6 (lower is better)
Translates to: SLRRSPSMLLIRTSS*RISKAPWIRSSRFI
Trigger: TATGAATCGAGATGATCGAATCCACGGAGCCTTGCTGATCCTCAACGAGCTAGTTCGTATCAGCAGCATGGAGGGAGAGCGTCTGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GGCACACCTGATCAAATTTCTCTTCCATCAAGTCTCTaGAACAGCGGCTTTCCACCAGAGTGGACTTGGCAG +
Preference number: 6 (lower is better)
Translates to: GTPDQISLPSSL*NSGFPPEWTWQ
Trigger: CTGCCAAGTCCACTCTGGTGGAAAGCCGCTGTTGCAGAGACTTGATGGAAGAGAAATTTGATCAGGTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp AACATGCTGATGCACGTGAATACGGTGGCATCCACCTaGACGGTTTTCTGCCTCTTGTGGGCAAAGTCCTTT +
Preference number: 6 (lower is better)
Translates to: NMLMHVNTVAST*TVFCLLWAKSF
Trigger: AAAGGACTTTGCCCACAAGAGGCAGAAAACCGTGCAGGTGGATGCCACCGTATTCACGTGCATCAGCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp TTCACCAGGCCAAAGAGCTGCATCACTCGTTCATCCTaGCGCAGATCTTCATGGCCTTTCAGGAGGAAAACA +
Preference number: 6 (lower is better)
Translates to: FTRPKSCITRSS*RRSSWPFRRKT
Trigger: TGTTTTCCTCCTGAAAGGCCATGAAGATCTGCGGCAGGATGAACGAGTGATGCAGCTCTTTGGCCTGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp CTGGATCGCTTGAGGGGAGGAGGTTTCGAAGGTAGTTaGCAAATCTGCCAATTCTGGTGGAATTCCCACCTT +
Preference number: 6 (lower is better)
Translates to: LDRLRGGGFEGS*QICQFWWNSHL
Trigger: AAGGTGGGAATTCCACCAGAATTGGCAGATTTGCCAACTACCTTCGAAACCTCCTCCCCTCAAGCGATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS CCA 72 bp TGCTGCTGCATGGTCTGCACAAAGTGTTGCATGTGCTaGAAGGCGTCAATCTTCCGAGCACTTTTCCACATG +
Preference number: 6 (lower is better)
Translates to: CCCMVCTKCCMC*KASIFRALFHM
Trigger: CATGTGGAAAAGTGCTCGGAAGATTGACGCCTTCCAGCACATGCAACACTTTGTGCAGACCATGCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TTGCAAAGACGGGGCTATGGATTGAATGCGAATGATTaGCTGGTTGGGGTCGTATGTTCCTGGCACAGCCAA +
Preference number: 6 (lower is better)
Translates to: LQRRGYGLNAND*LVGVVCSWHSQ
Trigger: TTGGCTGTGCCAGGAACATACGACCCCAACCAGCCAATCATTCGCATTCAATCCATAGCCCCGTCTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp TTTCTACTGACTGGCCGGCAGAGTAGGAGTCTGTCCTaGTCCGGGACCGCTTATTGCCTTTGGTATTTGTGT +
Preference number: 6 (lower is better)
Translates to: FLLTGRQSRSLS*SGTAYCLWYLC
Trigger: ACACAAATACCAAAGGCAATAAGCGGTCCCGGACAAGGACAGACTCCTACTCTGCCGGCCAGTCAGTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GTCTTGAGAAGTGAGAGCCAACTCAATACTCCTGATGAGCTCATCTaGCTGGTCTTCATTCAGCTCAGACCAGCAGGACACAAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: VLRSESQLNTPDELI*LVFIQLRPAGHKGS
Trigger: GCTGCCTTTGTGTCCTGCTGGTCTGAGCTGAATGAAGACCAGCAAGATGAGCTCATCAGGAGTATTGAGTTGGCTCTCACTTCTCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp CGAATCAGCTCTTCACTCACCATCATGGCCTGCTGGACCAGCGTGTaGCTGTGTTCACACATGTTCTTCAAGATCTTGTTGGCTGCATTG +
Preference number: 6 (lower is better)
Translates to: RISSSLTIMACWTSV*LCSHMFFKILLAAL
Trigger: CAATGCAGCCAACAAGATCTTGAAGAACATGTGTGAACACAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAGTGAAGAGCTGATTCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GCAGAGGTTCTCGTGAGATGTTGCCTGCTTGATAAGCAGCTCCACTaGGGTTGGAACATCCAAAGTGTCATCATGAGAGAAATCCCGACC +
Preference number: 6 (lower is better)
Translates to: AEVLVRCCLLDKQLH*GWNIQSVIMREIPT
Trigger: GGTCGGGATTTCTCTCATGATGACACTTTGGATGTTCCAACCCAAGTGGAGCTGCTTATCAAGCAGGCAACATCTCACGAGAACCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp TCACACATGTTCTTCAAGATCTTGTTGGCTGCATTGTaGCGGGCTGTGGTGGTAGACTTAGAAGCCACCGTC +
Preference number: 6 (lower is better)
Translates to: SHMFFKILLAAL*RAVVVDLEATV
Trigger: GACGGTGGCTTCTAAGTCTACCACCACAGCCCGTCACAATGCAGCCAACAAGATCTTGAAGAACATGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GTGAGAGCCAACTCAATACTCCTGATGAGCTCATCTTaGTGGTCTTCATTCAGCTCAGACCAGCAGGACACA +
Preference number: 6 (lower is better)
Translates to: VRANSILLMSSS*WSSFSSDQQDT
Trigger: TGTGTCCTGCTGGTCTGAGCTGAATGAAGACCAGCAAGATGAGCTCATCAGGAGTATTGAGTTGGCTCTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp CTTCACTCACCATCATGGCCTGCTGGACCAGCGTGTTaGTGTGTTCACACATGTTCTTCAAGATCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: LHSPSWPAGPAC*CVHTCSSRSCW
Trigger: CCAACAAGATCTTGAAGAACATGTGTGAACACAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAGTGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TTGGCTGTTGTCATGCATGAAGACCCGCAGCATGTGTaGGATCAACTGGGGCAGATAAAGCTTAAATTCCCC +
Preference number: 6 (lower is better)
Translates to: LAVVMHEDPQHV*DQLGQIKLKFP
Trigger: GGGGAATTTAAGCTTTATCTGCCCCAGTTGATCCCACACATGCTGCGGGTCTTCATGCATGACAACAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TTTGGTATTTGTGTCCATCAGCCTCCAGTTGAGCAGTaGGTCATAGACAAAGGCTTCCAGCACAGCCATGAC +
Preference number: 6 (lower is better)
Translates to: FGICVHQPPVEQ*VIDKGFQHSHD
Trigger: GTCATGGCTGTGCTGGAAGCCTTTGTCTATGACCCACTGCTCAACTGGAGGCTGATGGACACAAATACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp AGTGAGAGCCAACTCAATACTCCTGATGAGCTCATCTaGCTGGTCTTCATTCAGCTCAGACCAGCAGGACAC +
Preference number: 6 (lower is better)
Translates to: SESQLNTPDELI*LVFIQLRPAGH
Trigger: GTGTCCTGCTGGTCTGAGCTGAATGAAGACCAGCAAGATGAGCTCATCAGGAGTATTGAGTTGGCTCTCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp AGTCAGCTTCCGAGGCCTCTGCTTGGATGTGATGACTaGCAAAGACGGGGCTATGGATTGAATGCGAATGAT +
Preference number: 6 (lower is better)
Translates to: SQLPRPLLGCDD*QRRGYGLNAND
Trigger: ATCATTCGCATTCAATCCATAGCCCCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCTCGGAAGCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp GATGGCCAAGATGCCACCCTTCCTCTCATTGGCATCTaGGCTGGAAACCAGTTCAAAAATGTGATGGTTCAG +
Preference number: 6 (lower is better)
Translates to: DGQDATLPLIGI*AGNQFKNVMVQ
Trigger: CTGAACCATCACATTTTTGAACTGGTTTCCAGCTCAGATGCCAATGAGAGGAAGGGTGGCATCTTGGCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS TCA 72 bp TCCCACACAGCCACAAAAATGTTGTCAAAGAAGGGCTaGACTTGCTGGAAGAAGAAGGTGGGGACACTGATG +
Preference number: 6 (lower is better)
Translates to: SHTATKMLSKKG*TCWKKKVGTLM
Trigger: CATCAGTGTCCCCACCTTCTTCTTCCAGCAAGTTCAGCCCTTCTTTGACAACATTTTTGTGGCTGTGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057580.8
ENSMUST00000103221.10
CDS TCA 72 bp AGCTCCACTTGGGTTGGAACATCCAAAGTGTCATCATaGGAGAAATCCCGACCAGTGAGCTTATCTCGAACC +
Preference number: 6 (lower is better)
Translates to: SSTWVGTSKVSS*EKSRPVSLSRT
Trigger: GGTTCGAGATAAGCTCACTGGTCGGGATTTCTCTCATGATGACACTTTGGATGTTCCAACCCAAGTGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS GCA 72 bp GCTGTGTTCACACATGTTCTTCAAGATCTTGTTGGCTaGATTGTGACGGGCTGTGGTGGTAGACTTAGAAGC +
Preference number: 6 (lower is better)
Translates to: AVFTHVLQDLVG*IVTGCGGRLRS
Trigger: GCTTCTAAGTCTACCACCACAGCCCGTCACAATGCAGCCAACAAGATCTTGAAGAACATGTGTGAACACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp AGAGCCAACTCAATACTCCTGATGAGCTCATCTTGCTaGTCTTCATTCAGCTCAGACCAGCAGGACACAAAG +
Preference number: 6 (lower is better)
Translates to: RANSILLMSSSC*SSFSSDQQDTK
Trigger: CTTTGTGTCCTGCTGGTCTGAGCTGAATGAAGACCAGCAAGATGAGCTCATCAGGAGTATTGAGTTGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp TGGATGGATTCTGGCACAGTGGTCCCTGCTTTCTTATaGGCTGGTTCTCCAAGTTCTACACCGTCCAAAATT +
Preference number: 6 (lower is better)
Translates to: WMDSGTVVPAFL*AGSPSSTPSKI
Trigger: AATTTTGGACGGTGTAGAACTTGGAGAACCAGCCCATAAGAAAGCAGGGACCACTGTGCCAGAATCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp AACCACAGGGTGAGGACTCTTAGTGTATCCTGGAGGTaGTTGCCTCTTGACAAGGAGATAGAACGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: NHRVRTLSVSWR*LPLDKEIERKK
Trigger: CTTCTTCCGTTCTATCTCCTTGTCAAGAGGCAACAACCTCCAGGATACACTAAGAGTCCTCACCCTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp TCTTCACTCACCATCATGGCCTGCTGGACCAGCGTGTaGCTGTGTTCACACATGTTCTTCAAGATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SSLTIMACWTSV*LCSHMFFKILL
Trigger: CAACAAGATCTTGAAGAACATGTGTGAACACAGCAACACGCTGGTCCAGCAGGCCATGATGGTGAGTGAAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CTTGGATGTGATGACTTGCAAAGACGGGGCTATGGATaGAATGCGAATGATTGGCTGGTTGGGGTCGTATGT +
Preference number: 6 (lower is better)
Translates to: LGCDDLQRRGYG*NANDWLVGVVC
Trigger: ACATACGACCCCAACCAGCCAATCATTCGCATTCAATCCATAGCCCCGTCTTTGCAAGTCATCACATCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GCCCTTGTCACTGTGTTCCATGAACTCAGCCAAGTTCAGGAGGGTTaGTGTGACTTCAGCAATGTCTTGAGAAGTGAGAGCCAACTCAAT +
Preference number: 6 (lower is better)
Translates to: ALVTVFHELSQVQEG*CDFSNVLRSESQLN
Trigger: ATTGAGTTGGCTCTCACTTCTCAAGACATTGCTGAAGTCACACAAACCCTCCTGAACTTGGCTGAGTTCATGGAACACAGTGACAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 90 bp GAACTCAGCCAAGTTCAGGAGGGTTTGTGTGACTTCAGCAATGTCTaGAGAAGTGAGAGCCAACTCAATACTCCTGATGAGCTCATCTTG +
Preference number: 6 (lower is better)
Translates to: ELSQVQEGLCDFSNV*RSESQLNTPDELIL
Trigger: CAAGATGAGCTCATCAGGAGTATTGAGTTGGCTCTCACTTCTCAAGACATTGCTGAAGTCACACAAACCCTCCTGAACTTGGCTGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp ACCATTGGAATGAAGATCTGGTACTTCTTCCCCAGTTaGAAGACAAGCGAAGACAGAGTGTCCATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: TIGMKIWYFFPS*KTSEDRVSMAV
Trigger: CACAGCCATGGACACTCTGTCTTCGCTTGTCTTTCAACTGGGGAAGAAGTACCAGATCTTCATTCCAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp ATACGAACTAGCTCGTTGAGGATCAGCAAGGCTCCGTaGATTCGATCATCTCGATTCATACCCTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: IRTSSLRISKAP*IRSSRFIPFSL
Trigger: CAAAGAGAAGGGTATGAATCGAGATGATCGAATCCACGGAGCCTTGCTGATCCTCAACGAGCTAGTTCGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp AGATGTTGCCTGCTTGATAAGCAGCTCCACTTGGGTTaGAACATCCAAAGTGTCATCATGAGAGAAATCCCG +
Preference number: 6 (lower is better)
Translates to: RCCLLDKQLHLG*NIQSVIMREIP
Trigger: CGGGATTTCTCTCATGATGACACTTTGGATGTTCCAACCCAAGTGGAGCTGCTTATCAAGCAGGCAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CACCATTGGAATGAAGATCTGGTACTTCTTCCCCAGTaGAAAGACAAGCGAAGACAGAGTGTCCATGGCTGT +
Preference number: 6 (lower is better)
Translates to: HHWNEDLVLLPQ*KDKRRQSVHGC
Trigger: ACAGCCATGGACACTCTGTCTTCGCTTGTCTTTCAACTGGGGAAGAAGTACCAGATCTTCATTCCAATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp ACTGTGTTCCATGAACTCAGCCAAGTTCAGGAGGGTTaGTGTGACTTCAGCAATGTCTTGAGAAGTGAGAGC +
Preference number: 6 (lower is better)
Translates to: TVFHELSQVQEG*CDFSNVLRSES
Trigger: GCTCTCACTTCTCAAGACATTGCTGAAGTCACACAAACCCTCCTGAACTTGGCTGAGTTCATGGAACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CTCGTGAGATGTTGCCTGCTTGATAAGCAGCTCCACTaGGGTTGGAACATCCAAAGTGTCATCATGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LVRCCLLDKQLH*GWNIQSVIMRE
Trigger: TTCTCTCATGATGACACTTTGGATGTTCCAACCCAAGTGGAGCTGCTTATCAAGCAGGCAACATCTCACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp TCCGGTGTCGCACGAGGACTTTATTCACCATTGGAATaGAGATCTGGTACTTCTTCCCCAGTTGAAAGACAA +
Preference number: 6 (lower is better)
Translates to: SGVARGLYSPLE*RSGTSSPVERQ
Trigger: TTGTCTTTCAACTGGGGAAGAAGTACCAGATCTTCATTCCAATGGTGAATAAAGTCCTCGTGCGACACCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp AAGTTCAGGAGGGTTTGTGTGACTTCAGCAATGTCTTaGGAAGTGAGAGCCAACTCAATACTCCTGATGAGC +
Preference number: 6 (lower is better)
Translates to: KFRRVCVTSAMS*EVRANSILLMS
Trigger: GCTCATCAGGAGTATTGAGTTGGCTCTCACTTCTCAAGACATTGCTGAAGTCACACAAACCCTCCTGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CCA 72 bp GTTGATCCGGTGTCGCACGAGGACTTTATTCACCATTaGAATGAAGATCTGGTACTTCTTCCCCAGTTGAAA +
Preference number: 6 (lower is better)
Translates to: VDPVSHEDFIHH*NEDLVLLPQLK
Trigger: TTTCAACTGGGGAAGAAGTACCAGATCTTCATTCCAATGGTGAATAAAGTCCTCGTGCGACACCGGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS CAA 72 bp CAAGTTCAGGAGGGTTTGTGTGACTTCAGCAATGTCTaGAGAAGTGAGAGCCAACTCAATACTCCTGATGAG +
Preference number: 6 (lower is better)
Translates to: QVQEGLCDFSNV*RSESQLNTPDE
Trigger: CTCATCAGGAGTATTGAGTTGGCTCTCACTTCTCAAGACATTGCTGAAGTCACACAAACCCTCCTGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10
CDS TCA 72 bp CGACCAGTGAGCTTATCTCGAACCCTGTTAATAATCTaGATAGCTTTCTTGTTTAAGGCTTCTGGTTTCACC +
Preference number: 6 (lower is better)
Translates to: RPVSLSRTLLII*IAFLFKASGFT
Trigger: GGTGAAACCAGAAGCCTTAAACAAGAAAGCTATTCAGATTATTAACAGGGTTCGAGATAAGCTCACTGGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103221.10