Pregenerated sensors for MTO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032342Ensembl transcript IDs: ENSMUST00000034896.13, ENSMUST00000133002.2, ENSMUST00000148238.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCGCTGTGAGGACACACAGCCAGCTTCCTTATGGGCTCGGAACGTaGGCCGGGTGTCAGCATTATCGGGGCGCAGTGACAATCGGAACT | + |
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Preference number: 1 (lower is better) Translates to: IAVRTHSQLPYGLGT*AGCQHYRGAVTIGT Trigger: AGTTCCGATTGTCACTGCGCCCCGATAATGCTGACACCCGGCTCACGTTCCGAGCCCATAAGGAAGCTGGCTGTGTGTCCTCACAGCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 90 bp | ATGGGCTCGGAACGTGAGCCGGGTGTCAGCATTATCGGGGCGCAGTaGCAATCGGAACTCTACTCTGCTAGTGAACATTCGGTATGGCTC | + |
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Preference number: 1 (lower is better) Translates to: MGSEREPGVSIIGAQ*QSELYSASEHSVWL Trigger: GAGCCATACCGAATGTTCACTAGCAGAGTAGAGTTCCGATTGTCACTGCGCCCCGATAATGCTGACACCCGGCTCACGTTCCGAGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR GCA 90 bp | TCACAAGCACCGATTGGCCTGGCGTTCTGTCACTGCTGTCTGCTCTaGCGCGTGCTCCTCACAAATCTGAGCAGATTGATGATGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SQAPIGLAFCHCCLL*RVLLTNLSRLMMAA Trigger: AGCTGCCATCATCAATCTGCTCAGATTTGTGAGGAGCACGCGGCAGAGCAGACAGCAGTGACAGAACGCCAGGCCAATCGGTGCTTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR CCA 90 bp | CTGCCGCGTGCTCCTCACAAATCTGAGCAGATTGATGATGGCAGCTaGTGTCACTCCAGGAATACGACTAGCAGCCCCAATCGTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LPRAPHKSEQIDDGS*CHSRNTTSSPNRLW Trigger: CCACAGACGATTGGGGCTGCTAGTCGTATTCCTGGAGTGACACCAGCTGCCATCATCAATCTGCTCAGATTTGTGAGGAGCACGCGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR GCA 90 bp | CTCATAACTGGCTTCTATTTTCAGTCTTCTGGCGAGCTCTCTACATaGAGTATACTTCTCCAAGGGCTCGGGAAGCACGCCGACGAGCGA | + |
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Preference number: 1 (lower is better) Translates to: LITGFYFQSSGELST*SILLQGLGKHADER Trigger: TCGCTCGTCGGCGTGCTTCCCGAGCCCTTGGAGAAGTATACTGCATGTAGAGAGCTCGCCAGAAGACTGAAAATAGAAGCCAGTTATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 90 bp | CAGCAAAGAACAGCCGCTGAACCAAGTGTGTCTCGAGGGAAGGACTaGTCTGACGGGGGTCTAAATAATCATACTGCACACCATAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: QQRTAAEPSVSRGKD*SDGGLNNHTAHHSL Trigger: CAGGCTATGGTGTGCAGTATGATTATTTAGACCCCCGTCAGATCAGTCCTTCCCTCGAGACACACTTGGTTCAGCGGCTGTTCTTTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 90 bp | TCAAGTGTAGCTTCTCCCGGACTTCCTGGGACAATGACACATCCCTaGTGGTTAGGTAGTCGAGCTCGTGTGGAAGCTGCAAAGCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SSVASPGLPGTMTHP*WLGSRARVEAAKLH Trigger: ATGAAGCTTTGCAGCTTCCACACGAGCTCGACTACCTAACCATCAGGGATGTGTCATTGTCCCAGGAAGTCCGGGAGAAGCTACACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR CCA 90 bp | GATATGACAATACTGACTCATAACTGGCTTCTATTTTCAGTCTTCTaGCGAGCTCTCTACATGCAGTATACTTCTCCAAGGGCTCGGGAA | + |
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Preference number: 1 (lower is better) Translates to: DMTILTHNWLLFSVF*RALYMQYTSPRARE Trigger: TTCCCGAGCCCTTGGAGAAGTATACTGCATGTAGAGAGCTCGCCAGAAGACTGAAAATAGAAGCCAGTTATGAGTCAGTATTGTCATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 90 bp | CTAAATAGTGTTGACCTCATGCAGTGGAAATCTCTGAAAGGCCTATaGATAAGTGTATTTGAGAGTTCCGTTTGTGATCCCTACAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LNSVDLMQWKSLKGL*ISVFESSVCDPYKK Trigger: CTTCTTGTAGGGATCACAAACGGAACTCTCAAATACACTTATTCATAGGCCTTTCAGAGATTTCCACTGCATGAGGTCAACACTATTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR TCA 90 bp | AAATATTCACATACACTAACATGCATTCTTTTTCTTTTCCCTTATTaGGACAAGCCCAACTCTTGTAGCTCAGCTAGCTTGCAGATCATG | + |
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Preference number: 1 (lower is better) Translates to: KYSHTLTCILFLFPY*DKPNSCSSASLQIM Trigger: CATGATCTGCAAGCTAGCTGAGCTACAAGAGTTGGGCTTGTCTCAATAAGGGAAAAGAAAAAGAATGCATGTTAGTGTATGTGAATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR CAA 90 bp | CACTGCTGTCTGCTCTGCCGCGTGCTCCTCACAAATCTGAGCAGATaGATGATGGCAGCTGGTGTCACTCCAGGAATACGACTAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: HCCLLCRVLLTNLSR*MMAAGVTPGIRLAA Trigger: GGCTGCTAGTCGTATTCCTGGAGTGACACCAGCTGCCATCATCAATCTGCTCAGATTTGTGAGGAGCACGCGGCAGAGCAGACAGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR TCA 90 bp | CGGAACTCTACTCTGCTAGTGAACATTCGGTATGGCTCACTGGTGCCCAGGGTAACCCTTGCGGGTAGATaGGGTCGGAATCCATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RNSTLLVNIRYGSLVPRVTLAGR*GRNPFL Trigger: AAGGAATGGATTCCGACCTCATCTACCCGCAAGGGT...TACCCTGGGCACCAGTGAGCCATACCGAATGTTCACTAGCAGAGTAGAGTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGGGTGTCAGCATTATCGGGGCGCAGTGACAATCGGAACTCTACTCTGCTACTATGTAGCCTTCTGTaGGACTCACAACAAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SRVSALSGRSDNRNSTLLLCSLL*DSQQRV Trigger: CACCCTTTGTTGTGAGTCGCACAGAAGGCTACATAG...TAGCAGAGTAGAGTTCCGATTGTCACTGCGCCCCGATAATGCTGACACCCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR CCA 90 bp | GATGATGGCAGCTGGTGTCACTCCAGGAATACGACTAGCAGCCCCAATCGTCTGCTTCCTCATAGCCAGTaGTTCCATTTATCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DDGSWCHSRNTTSSPNRLLPHSQ*FHLSVQ Trigger: CTGGACAGATAAATGGAACCACTGGCTATGAGGAAG...CAGACGATTGGGGCTGCTAGTCGTATTCCTGGAGTGACACCAGCTGCCATCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR TCA 90 bp | AGTATACTTCTCCAAGGGCTCGGGAAGCACGCCGACGAGCGACTCCATGTCCACACTCTAAGTCCTCTATaGAATGAAAGTTCACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SILLQGLGKHADERLHVHTLSPL*NESSQA Trigger: TGCTTGTGAACTTTCATTTCATAGAGGACTTAGAGT...GTGGACATGGAGTCGCTCGTCGGCGTGCTTCCCGAGCCCTTGGAGAAGTATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACCCGTTACTGCTTATGTGGCACCAAAGTCACTTCCATATTTGCAAGTCTCGTATGTTTTGCCTCCTaGGAAGAGGGAGCGATTGGC | + |
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Preference number: 2 (lower is better) Translates to: LTRYCLCGTKVTSIFASLVCFAS*EEGAIG Trigger: GCCAATCGCTCCCTCTTCGCAGGAGGCAAAACATAC...GAGACTTGCAAATATGGAAGTGACTTTGGTGCCACATAAGCAGTAACGGGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTTCACAAGCACCGATTGGCCTGGCGTTCTGTCACTGCTGTCTGCTCTGCATACTGACTCATAACTaGCTTCTATTTTCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ESSQAPIGLAFCHCCLLCILTHN*LLFSVF Trigger: GAAGACTGAAAATAGAAGCCAGTTATGAGTCAGTAT...GCAGAGCAGACAGCAGTGACAGAACGCCAGGCCAATCGGTGCTTGTGAACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR CAA 90 bp | CTCTCACCCGTTACTGCTTATGTGGCACCAAAGTCACTTCCATATTaGCAAGTCTCTGGGAACTTCCATAACAAGTTAAACTGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: LSPVTAYVAPKSLPY*QVSGNFHNKLNWST Trigger: AGTACTCCAGTTTAACTTGTTATGGAAGTTCCCAGAGACTTGCAAATATGGAAGTGACTTTGGTGCCACATAAGCAGTAACGGGTGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCCGTTACTGCTTATGTGGCACCAAAGTCACTTCCATATTTGCAAGTCTCTTTTCTTTTCCCTTATTaGGACAAGCCCAACTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SPVTAYVAPKSLPYLQVSFLFPY*DKPNSC Trigger: ACAAGAGTTGGGCTTGTCTCAATAAGGGAAAAGAAA...AGAGACTTGCAAATATGGAAGTGACTTTGGTGCCACATAAGCAGTAACGGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCGGCTCCAACCAAACCTaGTGCAGACGATTTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: YFQCHLYFLFILSKPAVLGSNQT*CRRFGK Trigger: TTTTCCAAATCGTCTGCATCAGGTTTGGTTGGAGCC...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAGTGTATTTGAGAGTTCCGTTTGTGATCCCTACAAGAAGTCCTATGTTACAGTAGCTCAGCTAGCTTaGAGATCATGGTGTATCTGT | + |
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Preference number: 2 (lower is better) Translates to: ISVFESSVCDPYKKSYVTVAQLA*RSWCIC Trigger: ACAGATACACCATGATCTGCAAGCTAGCTGAGCTAC...TGTAACATAGGACTTCTTGTAGGGATCACAAACGGAACTCTCAAATACACTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCACTCTAAGTCCTCTATaGAATGAAAGTTCACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: YFQCHLYFLFILSKPAVLTLSPL*NESSQA Trigger: TGCTTGTGAACTTTCATTTCATAGAGGACTTAGAGT...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| 3UTR TCA 72 bp | AGGACACACAGCCAGCTTCCTTATGGGCTCGGAACGTaGGCCGGGTGTCAGCATTATCGGGGCGCAGTGACA | + |
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Preference number: 3 (lower is better) Translates to: RTHSQLPYGLGT*AGCQHYRGAVT Trigger: TGTCACTGCGCCCCGATAATGCTGACACCCGGCTCACGTTCCGAGCCCATAAGGAAGCTGGCTGTGTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTATACTTCTCCAAGGGCTCGGGAAGCACGCCGACGAGCGACTCCATGTCCAACTCGTAGACTGGCATaGATTCCAGCTATCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: QYTSPRAREARRRATPCPTRRLA*IPAITP Trigger: GGGGGTGATAGCTGGAATCAATGCCAGTCTACGAGT...TGGACATGGAGTCGCTCGTCGGCGTGCTTCCCGAGCCCTTGGAGAAGTATACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 72 bp | GCTTCTCCCGGACTTCCTGGGACAATGACACATCCCTaGTGGTTAGGTAGTCGAGCTCGTGTGGAAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: ASPGLPGTMTHP*WLGSRARVEAA Trigger: TGCAGCTTCCACACGAGCTCGACTACCTAACCATCAGGGATGTGTCATTGTCCCAGGAAGTCCGGGAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 72 bp | GAACGTGAGCCGGGTGTCAGCATTATCGGGGCGCAGTaGCAATCGGAACTCTACTCTGCTAGTGAACATTCG | + |
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Preference number: 3 (lower is better) Translates to: EREPGVSIIGAQ*QSELYSASEHS Trigger: CGAATGTTCACTAGCAGAGTAGAGTTCCGATTGTCACTGCGCCCCGATAATGCTGACACCCGGCTCACGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR CCA 72 bp | CTCTATGAAATGAAAGTTCACAAGCACCGATTGGCCTaGCGTTCTGTCACTGCTGTCTGCTCTGCCGCGTGC | + |
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Preference number: 3 (lower is better) Translates to: LYEMKVHKHRLA*RSVTAVCSAAC Trigger: GCACGCGGCAGAGCAGACAGCAGTGACAGAACGCCAGGCCAATCGGTGCTTGTGAACTTTCATTTCATAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 72 bp | ACAGCCGCTGAACCAAGTGTGTCTCGAGGGAAGGACTaGTCTGACGGGGGTCTAAATAATCATACTGCACAC | + |
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Preference number: 3 (lower is better) Translates to: TAAEPSVSRGKD*SDGGLNNHTAH Trigger: GTGTGCAGTATGATTATTTAGACCCCCGTCAGATCAGTCCTTCCCTCGAGACACACTTGGTTCAGCGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR CCA 72 bp | GCTCCTCACAAATCTGAGCAGATTGATGATGGCAGCTaGTGTCACTCCAGGAATACGACTAGCAGCCCCAAT | + |
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Preference number: 3 (lower is better) Translates to: APHKSEQIDDGS*CHSRNTTSSPN Trigger: ATTGGGGCTGCTAGTCGTATTCCTGGAGTGACACCAGCTGCCATCATCAATCTGCTCAGATTTGTGAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR CCA 72 bp | CAATCGGAACTCTACTCTGCTAGTGAACATTCGGTATaGCTCACTGGTGCCCAGGGTAGTGAGGTCATCAAT | + |
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Preference number: 3 (lower is better) Translates to: QSELYSASEHSV*LTGAQGSEVIN Trigger: ATTGATGACCTCACTACCCTGGGCACCAGTGAGCCATACCGAATGTTCACTAGCAGAGTAGAGTTCCGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR GCA 72 bp | ATTGAGACAAGCCCAACTCTTGTAGCTCAGCTAGCTTaGAGATCATGGTGTATCTGTTTGAGTAACACCCCC | + |
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Preference number: 3 (lower is better) Translates to: IETSPTLVAQLA*RSWCICLSNTP Trigger: GGGGGTGTTACTCAAACAGATACACCATGATCTGCAAGCTAGCTGAGCTACAAGAGTTGGGCTTGTCTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTTTATTTCTTGTAGCTGATATGACAATACTGACTCATAACTGGCTTCTATTCTCAGCCCATGGCTaGAGACTCCCACAGGGATTG | + |
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Preference number: 3 (lower is better) Translates to: PPLFLVADMTILTHNWLLFSAHG*RLPQGL Trigger: CAATCCCTGTGGGAGTCTCAAGCCATGGGCTGAGAA...TAGAAGCCAGTTATGAGTCAGTATTGTCATATCAGCTACAAGAAATAAAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR TCA 72 bp | AGGTCGGAATCCATTCCTTCAGGCTCCAACCAAACCTaGTGCAGACGATTTGGAAAACGTAAAACCTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: RSESIPSGSNQT*CRRFGKRKTFD Trigger: ATCAAAGGTTTTACGTTTTCCAAATCGTCTGCATCAGGTTTGGTTGGAGCCTGAAGGAATGGATTCCGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| 3UTR-3UTR CAA 90 bp | TACTGCTTATGTGGCACCAAAGTCACTTCCATATTTGCAAGTCTCTGGGAACTTTTTTCTTTTCCCTTATaGAGACAAGCCCAACTCTTG | + |
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Preference number: 3 (lower is better) Translates to: YCLCGTKVTSIFASLWELFSFPL*RQAQLL Trigger: CAAGAGTTGGGCTTGTCTCAATAAGGGAAAAGAAAA...AAGTTCCCAGAGACTTGCAAATATGGAAGTGACTTTGGTGCCACATAAGCAGTA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCACCAAAGTCACTTCCATATTTGCAAGTCTCTGGGAACTTCCATAACAAGTTTCCCCACTCCTTCATaGCTAAAATATTCACATACA | + |
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Preference number: 3 (lower is better) Translates to: WHQSHFHICKSLGTSITSFPTPS*LKYSHT Trigger: TGTATGTGAATATTTTAGCAATGAAGGAGTGGGGAA...ACTTGTTATGGAAGTTCCCAGAGACTTGCAAATATGGAAGTGACTTTGGTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| CDS-3UTR TCA 90 bp | CAAGCACCGATTGGCCTGGCGTTCTGTCACTGCTGTCTGCTCTGCCGCGTGCTCTGTCCACGCGGTGCGTaGGAAGCAGGGTCCGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: QAPIGLAFCHCCLLCRVLCPRGA*EAGSAS Trigger: GCTCGCGGACCCTGCTTCTCACGCACCGCGTGGACA...GAGCACGCGGCAGAGCAGACAGCAGTGACAGAACGCCAGGCCAATCGGTGCTTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| CDS-3UTR GCA 90 bp | TCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATCGTCGAAGTGCGGGGTaGAGGGCGCCGCGCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: SLSQRFSAHGLRLPQGLNRRSAG*RAPRCR Trigger: GCGACAGCGCGGCGCCCTGCACCCCGCACTTCGACG...ATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGAGAACCGCTGGCTTAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS-3UTR GCA 90 bp | GAAAGTTCACAAGCACCGATTGGCCTGGCGTTCTGTCACTGCTGTCTGCTCTGCACTACCACGTCGAAGTaGGGGGTGCAGGGCGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: ESSQAPIGLAFCHCCLLCTTTSK*GVQGAA Trigger: CGCGGCGCCCTGCACCCCGCACTTCGACGTGGTAGT...GCAGAGCAGACAGCAGTGACAGAACGCCAGGCCAATCGGTGCTTGTGAACTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| CDS-3UTR GCA 90 bp | AGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATCGTCGAAGTGCGGGGTaGAGGGCGCCGCGCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: SVIFISYSYSLSQRFSAHRRSAG*RAPRCR Trigger: GCGACAGCGCGGCGCCCTGCACCCCGCACTTCGACG...ATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS-3UTR TCA 90 bp | CATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTTGTCCACGCGGTGCGTaGGAAGCAGGGTCCGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: HLYFLFILSKPAVLSPWLCPRGA*EAGSAS Trigger: GCTCGCGGACCCTGCTTCTCACGCACCGCGTGGACA...AAGCCATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS-3UTR GCA 90 bp | CAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCAACTACCACGTCGAAGTaGGGGGTGCAGGGCGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: QCHLYFLFILSKPAVLSPTTTSK*GVQGAA Trigger: CGCGGCGCCCTGCACCCCGCACTTCGACGTGGTAGT...TGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS-3UTR GCA 90 bp | GAAAGTTCACAAGCACCGATTGGCCTGGCGTTCTGTCACTGCTGTCTGCTCTGCTTTCCGGTCAATCTGTaGTCTCAGTCCCCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: ESSQAPIGLAFCHCCLLCFPVNL*SQSPHS Trigger: GCTGTGTGGGGACTGAGAGCACAGATTGACCGGAAA...GCAGAGCAGACAGCAGTGACAGAACGCCAGGCCAATCGGTGCTTGTGAACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| CDS-3UTR CCA 90 bp | TCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATTCTGAGCCAACCCTATaGAGGGCTGATCCCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SLSQRFSAHGLRLPQGLNSEPTL*RADPPN Trigger: GTTTGGGGGATCAGCCCTCCATAGGGTTGGCTCAGA...ATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGAGAACCGCTGGCTTAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS-3UTR CCA 90 bp | ATTGGCCTGGCGTTCTGTCACTGCTGTCTGCTCTGCCGCGTGCTCCTCACAAATGTGAGTCAAGTAACATaGCAGTTGGTCTTCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IGLAFCHCCLLCRVLLTNVSQVT*QLVFRP Trigger: TGGCCGGAAGACCAACTGCCATGTTACTTGACTCAC...ATTTGTGAGGAGCACGCGGCAGAGCAGACAGCAGTGACAGAACGCCAGGCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| CDS-3UTR GCA 90 bp | TCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATGGCGAGCTCTCTACATaGAGTATACTTCTCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLSQRFSAHGLRLPQGLNGELST*SILLQG Trigger: CCCTTGGAGAAGTATACTGCATGTAGAGAGCTCGCC...ATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGAGAACCGCTGGCTTAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS-3UTR GCA 90 bp | CGGAACTCTACTCTGCTAGTGAACATTCGGTATGGCTCACTGGTGCCCAGGGTAAATGCCCCTTTCCGATaGCACCAAAGGAAGGATTAC | + |
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Preference number: 4 (lower is better) Translates to: RNSTLLVNIRYGSLVPRVNAPFR*HQRKDY Trigger: GTAATCCTTCCTTTGGTGGCATCGGAAAGGGGCATT...TACCCTGGGCACCAGTGAGCCATACCGAATGTTCACTAGCAGAGTAGAGTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
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| CDS-3UTR CCA 90 bp | TCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATGTGAGTCAAGTAACATaGCAGTTGGTCTTCCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSQRFSAHGLRLPQGLNVSQVT*QLVFRL Trigger: AAGCCGGAAGACCAACTGCCATGTTACTTGACTCAC...ATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGAGAACCGCTGGCTTAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS-3UTR GCA 90 bp | CTAGTGAACATTCGGTATGGCTCACTGGTGCCCAGGGTAGTGAGGTCATCAATCACTTCTCTCATCAAATaGCCCTTTCCGATGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVNIRYGSLVPRVVRSSITSLIK*PFPMPP Trigger: TGGTGGCATCGGAAAGGGGCATTTGATGAGAGAAGT...GATTGATGACCTCACTACCCTGGGCACCAGTGAGCCATACCGAATGTTCACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCATCGTGTCCACGCGGTaGGTGAGAAGCAGGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YFQCHLYFLFILSKPAVLIVSTR*VRSRVR Trigger: GCGGACCCTGCTTCTCACGCACCGCGTGGACACGAT...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATATCACCCCCTGAGCTaGAGCTTCCTCATAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCHLYFLFILSKPAVLSPYHPLS*SFLIAS Trigger: ACTGGCTATGAGGAAGCTGCAGCTCAGGGGGTGATA...TGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCAAGTGAACATTCGGTATaGCTCACTGGTGCCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCHLYFLFILSKPAVLSPSEHSV*LTGAQG Trigger: ACCCTGGGCACCAGTGAGCCATACCGAATGTTCACT...TGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR CCA 90 bp | CAAACCCTAAGTGCTCTCTCACCCGTTACTGCTTATGTGGCACCAAAGTCACTTATTGATGATGGCAGCTaGTGTCACTCCAGGAATACG | + |
|
Preference number: 4 (lower is better) Translates to: QTLSALSPVTAYVAPKSLIDDGS*CHSRNT Trigger: CGTATTCCTGGAGTGACACCAGCTGCCATCATCAAT...AAGTGACTTTGGTGCCACATAAGCAGTAACGGGTGAGAGAGCACTTAGGGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATTAGATATTTACATTATAACCCTATGGAGGGCTaGTCCCCCAAACGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAHGLRLPQGLNIRYLHYNPMEG*SPKRPA Trigger: TGCAGGACGTTTGGGGGATCAGCCCTCCATAGGGTT...ATAATGTAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR GCA 90 bp | AGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATTTTCCGGTCAATCTGTaGTCTCAGTCCCCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVIFISYSYSLSQRFSAHFPVNL*SQSPHS Trigger: GCTGTGTGGGGACTGAGAGCACAGATTGACCGGAAA...ATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCACATCCACTCGGGGGTTaGTGTGAGTCAAGTAACATG | + |
|
Preference number: 4 (lower is better) Translates to: QCHLYFLFILSKPAVLSPHPLGG*CESSNM Trigger: CATGTTACTTGACTCACACCAACCCCCGAGTGGATG...TGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS-3UTR TCA 90 bp | CATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTGGCTCCAACCAAACCTaGTGCAGACGATTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLYFLFILSKPAVLSPWLGSNQT*CRRFGK Trigger: TTTTCCAAATCGTCTGCATCAGGTTTGGTTGGAGCC...AAGCCATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR TCA 90 bp | AGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATTCTTTCAAATCGCTGTaGGGACACACAGCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVIFISYSYSLSQRFSAHSFKSL*GHTASF Trigger: GAAGCTGGCTGTGTGTCCTCACAGCGATTTGAAAGA...ATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCACTATGTAGCCTTCTGTaGGACTCACAACAAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCHLYFLFILSKPAVLSPLCSLL*DSQQRV Trigger: CACCCTTTGTTGTGAGTCGCACAGAAGGCTACATAG...TGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR CCA 90 bp | TCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATACTGACTCATAACTaGCTTCTATTTTCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSQRFSAHGLRLPQGLNILTHN*LLFSVF Trigger: GAAGACTGAAAATAGAAGCCAGTTATGAGTCAGTAT...ATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGAGAACCGCTGGCTTAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR TCA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAACTTCTCCAGAGTCTaGGCCAACCCTATGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFQCHLYFLFILSKPAVLNFSRV*ANPMEG Trigger: GCCCTCCATAGGGTTGGCTCAGACTCTGGAGAAGTT...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR TCA 90 bp | TCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATTAGATATTTACATTATACCCTTGCGGGTAGATaGGGTCGGAATCCATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAHGLRLPQGLNIRYLHYTLAGR*GRNPFL Trigger: AAGGAATGGATTCCGACCTCATCTACCCGCAAGGGT...ATAATGTAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR TCA 90 bp | TTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCATTATCGGGGCGCAGTaGCAATCGGAACTCTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQCHLYFLFILSKPAVLSIIGAQ*QSELYS Trigger: AGAGTAGAGTTCCGATTGTCACTGCGCCCCGATAAT...GCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR TCA 90 bp | CTTATGTGGCACCAAAGTCACTTCCATATTTGCAAGTCTCTGGGAACTTCCATAACAATGACACATCCCTaGTGGTTAGGTAGTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMWHQSHFHICKSLGTSITMTHP*WLGSRA Trigger: AGCTCGACTACCTAACCATCAGGGATGTGTCATTGT...TATGGAAGTTCCCAGAGACTTGCAAATATGGAAGTGACTTTGGTGCCACATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
||
| 3UTR CAA 72 bp | TCATACTCTCTAAGCCAGCGGTTCTCAGCCCATGGCTaGAGACTCCCACAGGGATTGAATATTAGATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SYSLSQRFSAHG*RLPQGLNIRYL Trigger: TAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGAGAACCGCTGGCTTAGAGAGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCATCCCCCAAACGTCCTaGAGGATGCATCTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: YFQCHLYFLFILSKPAVLIPQTS*RMHLQS Trigger: GGATTGGAGATGCATCCTGCAGGACGTTTGGGGGAT...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR CCA 90 bp | AGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATGCTGAATGGTATGGATaGATCATCTGGTGTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVIFISYSYSLSQRFSAHAEWYG*IIWCVL Trigger: AAGCACACACCAGATGATCCATCCATACCATTCAGC...ATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR TCA 90 bp | TCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATTAGATATTTACATTATACAATGACACATCCCTaGTGGTTAGGTAGTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAHGLRLPQGLNIRYLHYTMTHP*WLGSRA Trigger: AGCTCGACTACCTAACCATCAGGGATGTGTCATTGT...ATAATGTAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATTAGATATTTACATTATAATGCCCCTTTCCGATaGCACCAAAGGAAGGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SAHGLRLPQGLNIRYLHYNAPFR*HQRKDY Trigger: GTAATCCTTCCTTTGGTGGCATCGGAAAGGGGCATT...ATAATGTAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS-3UTR GCA 90 bp | TCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATTAGATATTTACATTATACTTCTCTCATCAAATaGCCCTTTCCGATGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SAHGLRLPQGLNIRYLHYTSLIK*PFPMPP Trigger: TGGTGGCATCGGAAAGGGGCATTTGATGAGAGAAGT...ATAATGTAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS-3UTR CCA 90 bp | TTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCTTCCTCATAGCCAGTaGTTCCATTTATCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQCHLYFLFILSKPAVLSLPHSQ*FHLSVQ Trigger: CTGGACAGATAAATGGAACCACTGGCTATGAGGAAG...GCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS-3UTR CCA 90 bp | TCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATTAGATATTTACATTATATTGATGATGGCAGCTaGTGTCACTCCAGGAATACG | + |
|
Preference number: 4 (lower is better) Translates to: SAHGLRLPQGLNIRYLHYIDDGS*CHSRNT Trigger: CGTATTCCTGGAGTGACACCAGCTGCCATCATCAAT...ATAATGTAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS-3UTR TCA 90 bp | CATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTAAAGCTTCATCTTGCTaGACCTCCTTTATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLYFLFILSKPAVLSPWLKASSC*TSFISC Trigger: ACAAGAAATAAAGGAGGTTCAGCAAGATGAAGCTTT...AAGCCATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS-3UTR TCA 90 bp | AACTGCATGGTACTAAATAGTGTTGACCTCATGCAGTGGAAATCTCTGAAAGGCAAAGCTTCATCTTGCTaGACCTCCTTTATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCMVLNSVDLMQWKSLKGKASSC*TSFISC Trigger: ACAAGAAATAAAGGAGGTTCAGCAAGATGAAGCTTT...GCCTTTCAGAGATTTCCACTGCATGAGGTCAACACTATTTAGTACCATGCAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
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| CDS-3UTR CCA 90 bp | TCAGCCCATGGCTTGAGACTCCCACAGGGATTGAATATTAGATATTTACATTATACTGAGAAAGCTGAATaGTATGGATGGATCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAHGLRLPQGLNIRYLHYTEKAE*YGWIIW Trigger: CCAGATGATCCATCCATACCATTCAGCTTTCTCAGT...ATAATGTAAATATCTAATATTCAATCCCTGTGGGAGTCTCAAGCCATGGGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| 3UTR CAA 72 bp | GTTACTGCTTATGTGGCACCAAAGTCACTTCCATATTaGCAAGTCTCTGGGAACTTCCATAACAAGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTAYVAPKSLPY*QVSGNFHNKLN Trigger: GTTTAACTTGTTATGGAAGTTCCCAGAGACTTGCAAATATGGAAGTGACTTTGGTGCCACATAAGCAGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133002.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATCAGAATTACACTCTCTaGATAAATTGTACTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVIFISYSYSLSQRFSAHQNYTL*INCTSI Trigger: GATGGAAGTACAATTTATGCAGAGAGTGTAATTCTG...ATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR GCA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAAACGTCCTGCAGGATaGATCTCCAATCCAATTATG | + |
|
Preference number: 4 (lower is better) Translates to: YFQCHLYFLFILSKPAVLKRPAG*ISNPIM Trigger: CATAATTGGATTGGAGATGCATCCTGCAGGACGTTT...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS-3UTR GCA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCGGATCATCTGGTGTGTaGTTGTTTAGAATGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFQCHLYFLFILSKPAVLGSSGV*LFRMEK Trigger: TTTCTCCATTCTAAACAAGCACACACCAGATGATCC...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS GCA 90 bp | AGGGCGCCGCGCTGTCGCTGCGGAGGCGACGCAAAGGCAGCCGTCTaGCGAGGGACGCTGCGGCCCAATGGCCACGGCCTCGGAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RAPRCRCGGDAKAAV*RGTLRPNGHGLGEG Trigger: TCCTTCTCCGAGGCCGTGGCCATTGGGCCGCAGCGTCCCTCGGCAGACGGCTGCCTTTGCGTCGCCTCCGCAGCGACAGCGCGGCGCCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS GCA 90 bp | GCCTCGGTCCCCGCGTGCCCTCCTCCGATAACTACCACGTCGAAGTaGGGGGTGCAGGGCGCCGCGCTGTCGCTGCGGAGGCGACGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ASVPACPPPITTTSK*GVQGAALSLRRRRK Trigger: TTTGCGTCGCCTCCGCAGCGACAGCGCGGCGCCCTGCACCCCGCACTTCGACGTGGTAGTTATCGGAGGAGGGCACGCGGGGACCGAGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS TCA 90 bp | CACTCTCTGCATAAATTGTACTTCCATCTGCCAGGACAACACCTCTaGCCCTGGACTTCCCAGGGTACCCAGGCTCTGGTTCTGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HSLHKLYFHLPGQHL*PWTSQGTQALVLQE Trigger: TTCTTGCAGAACCAGAGCCTGGGTACCCTGGGAAGTCCAGGGTCAGAGGTGTTGTCCTGGCAGATGGAAGTACAATTTATGCAGAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS GCA 90 bp | GACCATCCAAGGCATCCACTTCTCTCATCAAATGCCCCTTTCCGATaGCACCAAAGGAAGGATTACAGGACATCTGACCGATCGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DHPRHPLLSSNAPFR*HQRKDYRTSDRSCP Trigger: TGGACACGATCGGTCAGATGTCCTGTAATCCTTCCTTTGGTGGCATCGGAAAGGGGCATTTGATGAGAGAAGTGGATGCCTTGGATGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS GCA 90 bp | CAGAGTCTGAGCCAACCCTATGGAGGGCTGATCCCCCAAACGTCCTaGAGGATGCATCTCCAATCCAATTATGATCATGCCTCTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSLSQPYGGLIPQTS*RMHLQSNYDHASQK Trigger: TTTCTGAGAGGCATGATCATAATTGGATTGGAGATGCATCCTGCAGGACGTTTGGGGGATCAGCCCTCCATAGGGTTGGCTCAGACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR CAA 90 bp | CATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCAGCCCATGGCTTACTCGTAGACTGGCATaGATTCCAGCTATCACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLYFLFILSKPAVLSPWLTRRLA*IPAITP Trigger: GGGGGTGATAGCTGGAATCAATGCCAGTCTACGAGT...AAGCCATGGGCTGAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS GCA 90 bp | GATCATGCCTCTCAGAAATGTCCCAGTAGTCAGAATTACACTCTCTaGATAAATTGTACTTCCATCTGCCAGGACAACACCTCTGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: DHASQKCPSSQNYTL*INCTSICQDNTSDP Trigger: AGGGTCAGAGGTGTTGTCCTGGCAGATGGAAGTACAATTTATGCAGAGAGTGTAATTCTGACTACTGGGACATTTCTGAGAGGCATGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS GCA 90 bp | CTGTCACTGAGAAAGCTGAATGGTATGGATGGATCATCTGGTGTGTaGTTGTTTAGAATGGAGAAATTAATGGACTCTTTAGCGAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLRKLNGMDGSSGV*LFRMEKLMDSLASR Trigger: CCGACTCGCTAAAGAGTCCATTAATTTCTCCATTCTAAACAAGCACACACCAGATGATCCATCCATACCATTCAGCTTTCTCAGTGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS-3UTR CAA 90 bp | TATTTTCAGTGTCATCTTTATTTCCTATTCATACTCTCTAAGCCAGCGGTTCTCCAAGTAACATGGCAGTaGGTCTTCCGGCTTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YFQCHLYFLFILSKPAVLQVTWQ*VFRLDP Trigger: TGGATCAAGCCGGAAGACCAACTGCCATGTTACTTG...GAGAACCGCTGGCTTAGAGAGTATGAATAGGAAATAAAGATGACACTGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS GCA 72 bp | CGTCGAAGTGCGGGGTGCAGGGCGCCGCGCTGTCGCTaGGGAGGCGACGCAAAGGCAGCCGTCTGCCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSAGCRAPRCR*GGDAKAAVCRG Trigger: CCCTCGGCAGACGGCTGCCTTTGCGTCGCCTCCGCAGCGACAGCGCGGCGCCCTGCACCCCGCACTTCGACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS GCA 72 bp | CCCGCGTGCCCTCCTCCGATAACTACCACGTCGAAGTaGGGGGTGCAGGGCGCCGCGCTGTCGCTGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PACPPPITTTSK*GVQGAALSLRR Trigger: CCTCCGCAGCGACAGCGCGGCGCCCTGCACCCCGCACTTCGACGTGGTAGTTATCGGAGGAGGGCACGCGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS TCA 72 bp | TACAGGACATCTGACCGATCGTGTCCACGCGGTGCGTaGGAAGCAGGGTCCGCGAGCCACAGCGAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: YRTSDRSCPRGA*EAGSASHSERR Trigger: CCGCCGCTCGCTGTGGCTCGCGGACCCTGCTTCTCACGCACCGCGTGGACACGATCGGTCAGATGTCCTGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
||
| CDS TCA 72 bp | ACATGGCAGTTGGTCTTCCGGCCAGGACAACACCTCTaGCCCTGGACTTCCCAGGGTACCCAGGCTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TWQLVFRPGQHL*PWTSQGTQALV Trigger: AACCAGAGCCTGGGTACCCTGGGAAGTCCAGGGTCAGAGGTGTTGTCCTGGCCGGAAGACCAACTGCCATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148238.2 |
||
| CDS TCA 72 bp | CATAAATTGTACTTCCATCTGCCAGGACAACACCTCTaGCCCTGGACTTCCCAGGGTACCCAGGCTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HKLYFHLPGQHL*PWTSQGTQALV Trigger: AACCAGAGCCTGGGTACCCTGGGAAGTCCAGGGTCAGAGGTGTTGTCCTGGCAGATGGAAGTACAATTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
||
| CDS GCA 72 bp | AGCCAACCCTATGGAGGGCTGATCCCCCAAACGTCCTaGAGGATGCATCTCCAATCCAATTATGATCATGCC | + |
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Preference number: 6 (lower is better) Translates to: SQPYGGLIPQTS*RMHLQSNYDHA Trigger: GGCATGATCATAATTGGATTGGAGATGCATCCTGCAGGACGTTTGGGGGATCAGCCCTCCATAGGGTTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS GCA 72 bp | AGGCATCCACTTCTCTCATCAAATGCCCCTTTCCGATaGCACCAAAGGAAGGATTACAGGACATCTGACCGA | + |
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Preference number: 6 (lower is better) Translates to: RHPLLSSNAPFR*HQRKDYRTSDR Trigger: TCGGTCAGATGTCCTGTAATCCTTCCTTTGGTGGCATCGGAAAGGGGCATTTGATGAGAGAAGTGGATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS GCA 72 bp | CACAGACCATCCAAGGCATCCACTTCTCTCATCAAATaGCCCTTTCCGATGCCACCAAAGGAAGGATTACAG | + |
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Preference number: 6 (lower is better) Translates to: HRPSKASTSLIK*PFPMPPKEGLQ Trigger: CTGTAATCCTTCCTTTGGTGGCATCGGAAAGGGGCATTTGATGAGAGAAGTGGATGCCTTGGATGGTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS TCA 72 bp | GGTTCTGCAAGAACTAGATCTTCTACAGCTCCCTTCTaGACAGTGAGTAGGGGCGTGCTCAGGATTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSARTRSSTAPF*TVSRGVLRISF Trigger: GAAAGAAATCCTGAGCACGCCCCTACTCACTGTTCAGAAGGGAGCTGTAGAAGATCTAGTTCTTGCAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034896.13 ENSMUST00000148238.2 |
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| CDS CAA 90 bp | TCACTGAGAAAGCTGAATGGTATGGATGGATCATCTGGTGTGTGCTaGTTTAGAATGGAGAAATTAATGGACTCTTTAGCGAGTCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: SLRKLNGMDGSSGVC*FRMEKLMDSLASRG Trigger: ACCCCGACTCGCTAAAGAGTCCATTAATTTCTCCATTCTAAACAAGCACACACCAGATGATCCATCCATACCATTCAGCTTTCTCAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS GCA 72 bp | TCTCAGAAATGTCCCAGTAGTCAGAATTACACTCTCTaGATAAATTGTACTTCCATCTGCCAGGACAACACC | + |
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Preference number: 6 (lower is better) Translates to: SQKCPSSQNYTL*INCTSICQDNT Trigger: GGTGTTGTCCTGGCAGATGGAAGTACAATTTATGCAGAGAGTGTAATTCTGACTACTGGGACATTTCTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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| CDS GCA 72 bp | AGAAAGCTGAATGGTATGGATGGATCATCTGGTGTGTaGTTGTTTAGAATGGAGAAATTAATGGACTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RKLNGMDGSSGV*LFRMEKLMDSL Trigger: TAAAGAGTCCATTAATTTCTCCATTCTAAACAAGCACACACCAGATGATCCATCCATACCATTCAGCTTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034896.13 |
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