Pregenerated sensors for MTNR1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054764Ensembl transcript IDs: ENSMUST00000067984.9, ENSMUST00000130141.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGGCAACCCCCAAGACCTGGTTGCCCCAGAGACGAGAGAGTCTaGACACAGACCTCCTCTGCTGATACAAGTTGTCCATTTAACATA | + |
|
Preference number: 1 (lower is better) Translates to: CGQPPRPGCPRDERV*TQTSSADTSCPFNI Trigger: TATGTTAAATGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGACTCTCTCGTCTCTGGGGCAACCAGGTCTTGGGGGTTGCCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR TCA 90 bp | AACATATGGTGTGCCTGTTCAGCATTCCCCTTGATACTAGCAATCTaGTTATGGGGCAGACAGGAGATCCTTTCCAACACTATGGAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: NIWCACSAFPLILAI*LWGRQEILSNTMEA Trigger: TGCCTCCATAGTGTTGGAAAGGATCTCCTGTCTGCCCCATAATCAGATTGCTAGTATCAAGGGGAATGCTGAACAGGCACACCATATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR CCA 90 bp | CATGGTCCCTCTTGTCTTGAGTTCCTTCCACATTTTGTTCAGGTTTaGTCTGTTGCTGTATATTGTAATCCTAAATGTGGGCAACCCCCA | + |
|
Preference number: 1 (lower is better) Translates to: HGPSCLEFLPHFVQV*SVAVYCNPKCGQPP Trigger: TGGGGGTTGCCCACATTTAGGATTACAATATACAGCAACAGACCAAACCTGAACAAAATGTGGAAGGAACTCAAGACAAGAGGGACCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTTGGTCTGTTGCTGTATATTGTAATCCTAAATGTGGGCAACCCCCAAGACCTAGAGACGAGAGAGTCTaGACACAGACCTCCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VWSVAVYCNPKCGQPPRPRDERV*TQTSSA Trigger: AGCAGAGGAGGTCTGTGTGCAGACTCTCTCGTCTCT...AGGTCTTGGGGGTTGCCCACATTTAGGATTACAATATACAGCAACAGACCAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR CAA 90 bp | CCTCTTGTCTTGAGTTCCTTCCACATTTTGTTCAGGTTTGGTCTGTaGCTGTATATTGTAATCCTAAATGTGGGCAACCCCCAAGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: PLVLSSFHILFRFGL*LYIVILNVGNPQDL Trigger: CAGGTCTTGGGGGTTGCCCACATTTAGGATTACAATATACAGCAACAGACCAAACCTGAACAAAATGTGGAAGGAACTCAAGACAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR CAA 90 bp | GAGATCCTTTCCAACACTATGGAGGCAACCCTGAAGAGCTTCAAGTaGGATAGACTGATTTCTAGACAAAAGAAAGCAAACAAGGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: EILSNTMEATLKSFK*DRLISRQKKANKES Trigger: GCTCTCCTTGTTTGCTTTCTTTTGTCTAGAAATCAGTCTATCCAACTTGAAGCTCTTCAGGGTTGCCTCCATAGTGTTGGAAAGGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR CAA 90 bp | AGGAAGGTCCCCATGGTCCCTCTTGTCTTGAGTTCCTTCCACATTTaGTTCAGGTTTGGTCTGTTGCTGTATATTGTAATCCTAAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: RKVPMVPLVLSSFHI*FRFGLLLYIVILNV Trigger: CACATTTAGGATTACAATATACAGCAACAGACCAAACCTGAACAAAATGTGGAAGGAACTCAAGACAAGAGGGACCATGGGGACCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR GCA 72 bp | CCCCCAAGACCTGGTTGCCCCAGAGACGAGAGAGTCTaGACACAGACCTCCTCTGCTGATACAAGTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PPRPGCPRDERV*TQTSSADTSCP Trigger: TGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGACTCTCTCGTCTCTGGGGCAACCAGGTCTTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTGATTATGGGGCAGACAGGAGATCCTTTCCAACACTATGGAGGCAACCCCAGCCAGGACGGTCGTaGTCTCCCTCCCTCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSDYGADRRSFPTLWRQPQPGRS*SPSLPA Trigger: GGCGGGGAGGGAGGGAGACCACGACCGTCCTGGCTG...GGGTTGCCTCCATAGTGTTGGAAAGGATCTCCTGTCTGCCCCATAATCAGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | CTAAATGTGGGCAACCCCCAAGACCTGGTTGCCCCAGAGACGAGAGAGTCTGCAACCCTCCGTCTGACCTaGAGGACCAGGACCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: LNVGNPQDLVAPETRESATLRLT*RTRTHI Trigger: GATATGGGTCCTGGTCCTTCAGGTCAGACGGAGGGT...TGCAGACTCTCTCGTCTCTGGGGCAACCAGGTCTTGGGGGTTGCCCACATTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAGACGAGAGAGTCTGCACACAGACCTCCTCTGCTGATACAAGTTGTCTCCTGGGGACCATGGTaGCAGGGTCTGAGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: APETRESAHRPPLLIQVVSWGPW*QGLRPQ Trigger: TTGTGGCCTCAGACCCTGCCACCATGGTCCCCAGGA...GACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGACTCTCTCGTCTCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | CTAAATGTGGGCAACCCCCAAGACCTGGTTGCCCCAGAGACGAGAGAGTCTGCAGGTACACAGACAGGATaGCCAGCAGGTTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNVGNPQDLVAPETRESAGTQTG*PAGCPE Trigger: TTCTGGGCAACCTGCTGGTCATCCTGTCTGTGTACC...TGCAGACTCTCTCGTCTCTGGGGCAACCAGGTCTTGGGGGTTGCCCACATTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | AATCTGATTATGGGGCAGACAGGAGATCCTTTCCAACACTATGGAGGCAACCCTCCGCCTGGAGCCTGCTaGGTGGCATTGAGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NLIMGQTGDPFQHYGGNPPPGAC*VALSSS Trigger: CGAGCTGCTCAATGCCACTCAGCAGGCTCCAGGCGG...AGGGTTGCCTCCATAGTGTTGGAAAGGATCTCCTGTCTGCCCCATAATCAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | CCTAAATGTGGGCAACCCCCAAGACCTGGTTGCCCCAGAGACGAGAGAGTCTGCAAGTTCCTGAAGTCCTaGGGCTTCAGTTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PKCGQPPRPGCPRDERVCKFLKS*GFSLGL Trigger: CAAGCCCAAACTGAAGCCCCAGGACTTCAGGAACTT...GCAGACTCTCTCGTCTCTGGGGCAACCAGGTCTTGGGGGTTGCCCACATTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTTTCCAACACTATGGAGGCAACCCTGAAGAGCTTCAAGTTGGATAGACTGGGATCCTGGGGACCATaGTGGCAGGGTCTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILSNTMEATLKSFKLDRLGSWGP*WQGLRP Trigger: TGGCCTCAGACCCTGCCACCATGGTCCCCAGGATCC...CAGTCTATCCAACTTGAAGCTCTTCAGGGTTGCCTCCATAGTGTTGGAAAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTCTGCACACAGACCTCCTCTGCTGATACAAGTTGTCCATTTAACATATGGGTTTCACCCTCCGTCTaGCCTGAAGGACCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RVCTQTSSADTSCPFNIWVSPSV*PEGPGP Trigger: GGGTCCTGGTCCTTCAGGTCAGACGGAGGGTGAAAC...CCATATGTTAAATGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | AACACTATGGAGGCAACCCTGAAGAGCTTCAAGTTGGATAGACTGATTTCTAGAGCCACTCTGGGATCCTaGGGACCATGGTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTMEATLKSFKLDRLISRATLGS*GPWWQG Trigger: ACCCTGCCACCATGGTCCCCAGGATCCCAGAGTGGC...TCTAGAAATCAGTCTATCCAACTTGAAGCTCTTCAGGGTTGCCTCCATAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | CCCCATGGTCCCTCTTGTCTTGAGTTCCTTCCACATTTTGTTCAGGTTTGGTCTCATGGTGGCAGGGTCTaGGGCCACAATAAGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PHGPSCLEFLPHFVQVWSHGGRV*GHNKTY Trigger: ATAGGTCTTATTGTGGCCTCAGACCCTGCCACCATG...AGACCAAACCTGAACAAAATGTGGAAGGAACTCAAGACAAGAGGGACCATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | GAGTCTGCACACAGACCTCCTCTGCTGATACAAGTTGTCCATTTAACATATGGTCACGAACAGCCACTCTaGGATCCTGGGGACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESAHRPPLLIQVVHLTYGHEQPL*DPGDHG Trigger: ACCATGGTCCCCAGGATCCCAGAGTGGCTGTTCGTG...ACCATATGTTAAATGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | CTAAATGTGGGCAACCCCCAAGACCTGGTTGCCCCAGAGACGAGAGAGTCTGCAATCTGCTTCTTCATTTaGACTCTCCACAAAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LNVGNPQDLVAPETRESAICFFI*TLHKEH Trigger: ATGTTCTTTGTGGAGAGTTCAAATGAAGAAGCAGAT...TGCAGACTCTCTCGTCTCTGGGGCAACCAGGTCTTGGGGGTTGCCCACATTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | AACACTCTGTATCACTCGCTTACAATAAAAGGAAGGTCCCCATGGTCCCTCTTGCCTGGGGCTTCAGTTTaGGCTTGTTGTCGGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTLYHSLTIKGRSPWSLLPGASV*ACCRVS Trigger: TGAAACCCGACAACAAGCCCAAACTGAAGCCCCAGG...CAAGAGGGACCATGGGGACCTTCCTTTTATTGTAAGCGAGTGATACAGAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | ATAAACACTCTGTATCACTCGCTTACAATAAAAGGAAGGTCCCCATGGTCCCTCATATTTTGTCGTACTTaGGGCTGTGGCAAATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: INTLYHSLTIKGRSPWSLIFCRT*GCGKCS Trigger: GCTACATTTGCCACAGCCTCAAGTACGACAAAATAT...GAGGGACCATGGGGACCTTCCTTTTATTGTAAGCGAGTGATACAGAGTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCACACAGACCTCCTCTGCTGATACAAGTTGTCCATTTAACATATGGTGTGATAGGCACGATGAAATaGAAAACCACCACTGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SAHRPPLLIQVVHLTYGVIGTMK*KTTTAI Trigger: GATAGCAGTGGTGGTTTTCCATTTCATCGTGCCTAT...CACACCATATGTTAAATGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGGTCTGTTGCTGTATATTGTAATCCTAAATGTGGGCAACCCCCAAGACCTCACAAATATATTCCCTaGGTTCCTGAGCTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VWSVAVYCNPKCGQPPRPHKYIP*VPELLV Trigger: AACAAGAAGCTCAGGAACTCAGGGAATATATTTGTG...AGGTCTTGGGGGTTGCCCACATTTAGGATTACAATATACAGCAACAGACCAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR CAA 72 bp | TCCAACACTATGGAGGCAACCCTGAAGAGCTTCAAGTaGGATAGACTGATTTCTAGACAAAAGAAAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNTMEATLKSFK*DRLISRQKKAN Trigger: GTTTGCTTTCTTTTGTCTAGAAATCAGTCTATCCAACTTGAAGCTCTTCAGGGTTGCCTCCATAGTGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| 3UTR CAA 72 bp | TTGAGTTCCTTCCACATTTTGTTCAGGTTTGGTCTGTaGCTGTATATTGTAATCCTAAATGTGGGCAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSFHILFRFGL*LYIVILNVGNP Trigger: GGGGTTGCCCACATTTAGGATTACAATATACAGCAACAGACCAAACCTGAACAAAATGTGGAAGGAACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CCA 90 bp | AAAGATGAGGATGAAGGCCAGTGTAGAGGCCAGCCAGGACGGTCGTaGTCTCCCTCCCTCCCCGCCGCCTGGAGCCTGCTGAGTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: KDEDEGQCRGQPGRS*SPSLPAAWSLLSGI Trigger: AATGCCACTCAGCAGGCTCCAGGCGGCGGGGAGGGAGGGAGACCACGACCGTCCTGGCTGGCCTCTACACTGGCCTTCATCCTCATCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | CTGATTATGGGGCAGACAGGAGATCCTTTCCAACACTATGGAGGCAACCCTGAAAGGATGACCAGCAGGTaGCCCAGAATGTCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: LIMGQTGDPFQHYGGNPERMTSR*PRMSTT Trigger: CGTGGTGGACATTCTGGGCAACCTGCTGGTCATCCT...TTCAGGGTTGCCTCCATAGTGTTGGAAAGGATCTCCTGTCTGCCCCATAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | ATTATGGGGCAGACAGGAGATCCTTTCCAACACTATGGAGGCAACCCTGAAGAGCTGGAGTGTTCCGGTTaGCAGGTTGGGCATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: IMGQTGDPFQHYGGNPEELECSG*QVGHDG Trigger: GCCATCATGCCCAACCTGCAAACCGGAACACTCCAG...CTCTTCAGGGTTGCCTCCATAGTGTTGGAAAGGATCTCCTGTCTGCCCCATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | CAAGACCTGGTTGCCCCAGAGACGAGAGAGTCTGCACACAGACCTCCTCTGCTGTTGTTACTGTATATTTaGTCGTACTTGAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QDLVAPETRESAHRPPLLLLLYI*SYLRLW Trigger: CCACAGCCTCAAGTACGACAAAATATACAGTAACAA...CAGCAGAGGAGGTCTGTGTGCAGACTCTCTCGTCTCTGGGGCAACCAGGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTCCAACACTATGGAGGCAACCCTGAAGAGCTTCAAGTTGGATAGACTGGCGATCCCCGTGATGTaGAATATCGAGCCGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: ILSNTMEATLKSFKLDRLAIPVM*NIEPMT Trigger: TGTCATCGGCTCGATATTCAACATCACGGGGATCGC...CAGTCTATCCAACTTGAAGCTCTTCAGGGTTGCCTCCATAGTGTTGGAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | TCTGCACACAGACCTCCTCTGCTGATACAAGTTGTCCATTTAACATATGGTGTGGGCTTCAGTTTGGGCTaGTTGTCGGGTTTCACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAHRPPLLIQVVHLTYGVGFSLG*LSGFTL Trigger: GAGGGTGAAACCCGACAACAAGCCCAAACTGAAGCC...CACACCATATGTTAAATGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTTGCTGTATATTGTAATCCTAAATGTGGGCAACCCCCAAGACCTGGTTGCTTCCTGAGCTTCTTGTaGCGGTACACAGACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SVAVYCNPKCGQPPRPGCFLSFL*RYTDRM Trigger: CATCCTGTCTGTGTACCGCAACAAGAAGCTCAGGAA...GCAACCAGGTCTTGGGGGTTGCCCACATTTAGGATTACAATATACAGCAACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | GTCTGCACACAGACCTCCTCTGCTGATACAAGTTGTCCATTTAACATATGGTGTGAGTTCCTGAGCTTCTaGTTGCGGTACACAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCTQTSSADTSCPFNIWCEFLSF*LRYTDR Trigger: CCTGTCTGTGTACCGCAACAAGAAGCTCAGGAACTC...ACACCATATGTTAAATGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | AACACTATGGAGGCAACCCTGAAGAGCTTCAAGTTGGATAGACTGATTTCTAGATTCAGTTTGGGCTTGTaGTCGGGTTTCACCCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NTMEATLKSFKLDRLISRFSLGL*SGFTLR Trigger: ACGGAGGGTGAAACCCGACAACAAGCCCAAACTGAA...TCTAGAAATCAGTCTATCCAACTTGAAGCTCTTCAGGGTTGCCTCCATAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGGTCTGTTGCTGTATATTGTAATCCTAAATGTGGGCAACCCCCAAGACCTATAAGACCTATGAGGTaGAGTGGGGCCCAACAAATG | + |
|
Preference number: 5 (lower is better) Translates to: VWSVAVYCNPKCGQPPRPIRPMR*SGAQQM Trigger: CATTTGTTGGGCCCCACTCAACCTCATAGGTCTTAT...AGGTCTTGGGGGTTGCCCACATTTAGGATTACAATATACAGCAACAGACCAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS-3UTR CAA 90 bp | GTCTGCACACAGACCTCCTCTGCTGATACAAGTTGTCCATTTAACATATGGTGTTCCACAAAGAACATCTaGGCTGTGCACAACGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: VCTQTSSADTSCPFNIWCSTKNI*AVHNET Trigger: TGTCTCGTTGTGCACAGCCAAGATGTTCTTTGTGGA...ACACCATATGTTAAATGGACAACTTGTATCAGCAGAGGAGGTCTGTGTGCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS TCA 90 bp | CCACAAATATATTCCCAGACGGATATAAAGGGTTCTGGGGTACTGTaGAGGAACAGACAGGAAAGAAGAACCGTAACAGAATCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQIYSQTDIKGSGVL*RNRQERRTVTESRA Trigger: TGCTCTGGATTCTGTTACGGTTCTTCTTTCCTGTCTGTTCCTTCACAGTACCCCAGAACCCTTTATATCCGTCTGGGAATATATTTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130141.2 |
||
| CDS CCA 90 bp | GCTAAACTCACCACAAATATATTCCCAGACGGATATAAAGGGTTCTaGGGTACTGTGAAGGAACAGACAGGAAAGAAGAACCGTAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AKLTTNIFPDGYKGF*GTVKEQTGKKNRNR Trigger: TCTGTTACGGTTCTTCTTTCCTGTCTGTTCCTTCACAGTACCCCAGAACCCTTTATATCCGTCTGGGAATATATTTGTGGTGAGTTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130141.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGATCCTTTCCAACACTATGGAGGCAACCCTGAAGAGCTTCAAGTTGGATATCTGCTTCTTCATTaGAACTCTCCACAAAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: TGDPFQHYGGNPEELQVGYLLLH*NSPQRT Trigger: TGTTCTTTGTGGAGAGTTCAAATGAAGAAGCAGATA...TCCAACTTGAAGCTCTTCAGGGTTGCCTCCATAGTGTTGGAAAGGATCTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CCA 72 bp | CCAGGACGGTCGTGGTCTCCCTCCCTCCCCGCCGCCTaGAGCCTGCTGAGTGGCATTGAGCAGCTCGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGRSWSPSLPAA*SLLSGIEQLAD Trigger: GTCAGCGAGCTGCTCAATGCCACTCAGCAGGCTCCAGGCGGCGGGGAGGGAGGGAGACCACGACCGTCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CCA 72 bp | GATGAAGGCCAGTGTAGAGGCCAGCCAGGACGGTCGTaGTCTCCCTCCCTCCCCGCCGCCTGGAGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DEGQCRGQPGRS*SPSLPAAWSLL Trigger: CAGCAGGCTCCAGGCGGCGGGGAGGGAGGGAGACCACGACCGTCCTGGCTGGCCTCTACACTGGCCTTCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS TCA 72 bp | CGTGGTCTCCCTCCCTCCCCGCCGCCTGGAGCCTGCTaGGTGGCATTGAGCAGCTCGCTGACATTGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGLPPSPPPGAC*VALSSSLTLPF Trigger: GAAGGGCAATGTCAGCGAGCTGCTCAATGCCACTCAGCAGGCTCCAGGCGGCGGGGAGGGAGGGAGACCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CAA 72 bp | GGAGTAGATCCGGGGATCGTACTGGAGTGTTCCGGTTaGCAGGTTGGGCATGATGGCGATGAGTGTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GVDPGIVLECSG*QVGHDGDECQH Trigger: ATGCTGACACTCATCGCCATCATGCCCAACCTGCAAACCGGAACACTCCAGTACGATCCCCGGATCTACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CAA 72 bp | ATCCGGGGATCGTACTGGAGTGTTCCGGTTTGCAGGTaGGGCATGATGGCGATGAGTGTCAGCATCCATATC | + |
|
Preference number: 6 (lower is better) Translates to: IRGSYWSVPVCR*GMMAMSVSIHI Trigger: GATATGGATGCTGACACTCATCGCCATCATGCCCAACCTGCAAACCGGAACACTCCAGTACGATCCCCGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CAA 90 bp | GAAGGTACAGGAGTAGATCCGGGGATCGTACTGGAGTGTTCCGGTTaGCAGGTTGGGCATGATGGCGATGAGTGTCAGCATCCATATCAG | + |
|
Preference number: 6 (lower is better) Translates to: EGTGVDPGIVLECSG*QVGHDGDECQHPYQ Trigger: CTGATATGGATGCTGACACTCATCGCCATCATGCCCAACCTGCAAACCGGAACACTCCAGTACGATCCCCGGATCTACTCCTGTACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS TCA 72 bp | TCAGTTTGGGCTTGTTGTCGGGTTTCACCCTCCGTCTaGCCTGAAGGACCAGGACCCATATCCTTAAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVWACCRVSPSV*PEGPGPISLSS Trigger: GCTACTTAAGGATATGGGTCCTGGTCCTTCAGGTCAGACGGAGGGTGAAACCCGACAACAAGCCCAAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CAA 72 bp | TTCTTGTTGCGGTACACAGACAGGATGACCAGCAGGTaGCCCAGAATGTCCACCACGATGGTAAAGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLLRYTDRMTSR*PRMSTTMVKMR Trigger: CCTCATCTTTACCATCGTGGTGGACATTCTGGGCAACCTGCTGGTCATCCTGTCTGTGTACCGCAACAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CAA 72 bp | CTCACCACAAATATATTCCCTGAGTTCCTGAGCTTCTaGTTGCGGTACACAGACAGGATGACCAGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTTNIFPEFLSF*LRYTDRMTSRL Trigger: CAACCTGCTGGTCATCCTGTCTGTGTACCGCAACAAGAAGCTCAGGAACTCAGGGAATATATTTGTGGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CAA 90 bp | ACAGCTAAACTCACCACAAATATATTCCCTGAGTTCCTGAGCTTCTaGTTGCGGTACACAGACAGGATGACCAGCAGGTTGCCCAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: TAKLTTNIFPEFLSF*LRYTDRMTSRLPRM Trigger: CATTCTGGGCAACCTGCTGGTCATCCTGTCTGTGTACCGCAACAAGAAGCTCAGGAACTCAGGGAATATATTTGTGGTGAGTTTAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||
| CDS CAA 72 bp | CAGGAAAGAAGAACCGTAACAGAATCCAGAGCAAGTTaGATGTCTTCTGAGTTCCTGAGCTTCTTGTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QERRTVTESRAS*MSSEFLSFLLR Trigger: CCGCAACAAGAAGCTCAGGAACTCAGAAGACATCAAACTTGCTCTGGATTCTGTTACGGTTCTTCTTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130141.2 |
||
| CDS TCA 72 bp | TATTCCCAGACGGATATAAAGGGTTCTGGGGTACTGTaGAGGAACAGACAGGAAAGAAGAACCGTAACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: YSQTDIKGSGVL*RNRQERRTVTE Trigger: TTCTGTTACGGTTCTTCTTTCCTGTCTGTTCCTTCACAGTACCCCAGAACCCTTTATATCCGTCTGGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130141.2 |
||
| CDS CCA 72 bp | ACCACAAATATATTCCCAGACGGATATAAAGGGTTCTaGGGTACTGTGAAGGAACAGACAGGAAAGAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TTNIFPDGYKGF*GTVKEQTGKKN Trigger: GTTCTTCTTTCCTGTCTGTTCCTTCACAGTACCCCAGAACCCTTTATATCCGTCTGGGAATATATTTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130141.2 |
||
| CDS CAA 90 bp | TTAATCTTATCTGCTTCTTCATTTGAACTCTCCACAAAGAACATCTaGGCTGTGCACAACGAGACAATAATCTTTTTGTATTCCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LILSASSFELSTKNI*AVHNETIIFLYSFL Trigger: CAGAAAGGAATACAAAAAGATTATTGTCTCGTTGTGCACAGCCAAGATGTTCTTTGTGGAGAGTTCAAATGAAGAAGCAGATAAGATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067984.9 |
||