Pregenerated sensors for MTMR9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035078Ensembl transcript IDs: ENSMUST00000058679.7, ENSMUST00000225449.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCACCACCTGCTCATTAAGTGGAGGGCCTAACAGGCCATATCTGTaGGTGACTGCCACCTTGCAGTGCTTAGAAGGCCATTACATTACA | + |
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Preference number: 1 (lower is better) Translates to: STTCSLSGGPNRPYL*VTATLQCLEGHYIT Trigger: TGTAATGTAATGGCCTTCTAAGCACTGCAAGGTGGCAGTCACTCACAGATATGGCCTGTTAGGCCCTCCACTTAATGAGCAGGTGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR CCA 90 bp | GAGTTCAGAGGTTTACAACCTAGTCCTATAATCTCAGGTTTCCTCTaGGATGGCTGTGCAAAGGAAGCAGCTGCTATGAACAGTAGATTA | + |
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Preference number: 1 (lower is better) Translates to: EFRGLQPSPIISGFL*DGCAKEAAAMNSRL Trigger: TAATCTACTGTTCATAGCAGCTGCTTCCTTTGCACAGCCATCCCAGAGGAAACCTGAGATTATAGGACTAGGTTGTAAACCTCTGAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR GCA 90 bp | AATGATAGTGCACTTCCATCCAAAGAGCCACATTCAGATACAGGGTaGAATCCTTATGCTCGGCTATTGAAGAAATACACATTCTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: NDSALPSKEPHSDTG*NPYARLLKKYTFFF Trigger: GAAAAAGAATGTGTATTTCTTCAATAGCCGAGCATAAGGATTGCACCCTGTATCTGAATGTGGCTCTTTGGATGGAAGTGCACTATCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR GCA 90 bp | TGCACACAAATGTGCACAGAGAGACATACAATACAAAAAGTGTTCTaGAAGCATTCTCAAGTTTCAGCAAAGCATACATTTCACGCACGT | + |
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Preference number: 1 (lower is better) Translates to: CTQMCTERHTIQKVF*KHSQVSAKHTFHAR Trigger: ACGTGCGTGAAATGTATGCTTTGCTGAAACTTGAGAATGCTTGCAGAACACTTTTTGTATTGTATGTCTCTCTGTGCACATTTGTGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR GCA 90 bp | GTGCAGACTTCCAAACGCTTAGACTTTTCCCTAAGAGTATATGTGTaGACACAAATGTGCACAGAGAGACATACAATACAAAAAGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: VQTSKRLDFSLRVYV*TQMCTERHTIQKVF Trigger: GAACACTTTTTGTATTGTATGTCTCTCTGTGCACATTTGTGTGCACACATATACTCTTAGGGAAAAGTCTAAGCGTTTGGAAGTCTGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR CAA 90 bp | GGCAGTGCTGCACAATGCCACCTCATCACAAGTCACGGCCAACCCTaGACCTGCAAGAGGCTAGAGAGAAAGGTTATCAACATCGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GSAAQCHLITSHGQP*TCKRLERKVINIGS Trigger: GGAGCCGATGTTGATAACCTTTCTCTCTAGCCTCTTGCAGGTCAAGGGTTGGCCGTGACTTGTGATGAGGTGGCATTGTGCAGCACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCACTGTGAACATGAATTaGAGGGCAAACAGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLAVLRRPLHYRDSAPTATVNMN*RANRGR Trigger: TCTCCCTCTGTTTGCCCTTCAATTCATGTTCACAGT...GGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR-3UTR TCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACGGCCATATCTGTGAGTaGCTGCCACCTTGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHGHICE*LPPCSA Trigger: AGCACTGCAAGGTGGCAGTCACTCACAGATATGGCC...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGCTATTTCTCAATGTCATATACCAAGTGACAAACCAACTCAGGGGAACTCAGCACGGGCAGTGCTaGACAATGCCACCTCATCAC | + |
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Preference number: 2 (lower is better) Translates to: KRLFLNVIYQVTNQLRGTQHGQC*TMPPHH Trigger: GTGATGAGGTGGCATTGTGCAGCACTGCCCGTGCTG...AGTTCCCCTGAGTTGGTTTGTCACTTGGTATATGACATTGAGAAATAGCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGTCATATACCAAGTGACAAACCAACTCAGGGGAACTGGCTCCAGTTACATAGGTTTCCTCTGGGATaGCTGTGCAAAGGAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QCHIPSDKPTQGNWLQLHRFPLG*LCKGSS Trigger: GCTGCTTCCTTTGCACAGCCATCCCAGAGGAAACCT...ATGTAACTGGAGCCAGTTCCCCTGAGTTGGTTTGTCACTTGGTATATGACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATTGTTCCTCTGGGATGGCTGTaGAAAGGAAGCAGCTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: SAKHTFHARFAIPCNFIVPLGWL*KGSSCY Trigger: ATAGCAGCTGCTTCCTTTGCACAGCCATCCCAGAGG...AACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGGCTATTTCTCAATGTCATATACCAAGTGACAAACCAACTCAGGGGAACGGCCAACCCTTGACCTaGAAGAGGCTAGAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: QEAISQCHIPSDKPTQGNGQPLT*KRLERK Trigger: CTTTCTCTCTAGCCTCTTGCAGGTCAAGGGTTGGCC...GTTCCCCTGAGTTGGTTTGTCACTTGGTATATGACATTGAGAAATAGCCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATACCTTCCCCAAGCCTTaGAGTTTAAAGTGGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: SFSKAYISRTFCHTVQLHTFPKP*SLKWTQ Trigger: TTGGGTCCACTTTAAACTGCAAGGCTTGGGGAAGGT...ATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATTGTTATCTCAGGTTTCCTCTaGGATGGCTGTGCAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SAKHTFHARFAIPCNFIVISGFL*DGCAKE Trigger: TTCCTTTGCACAGCCATCCCAGAGGAAACCTGAGAT...AACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATTGTTACTACGTGCAAACTTTaGACTTCTGCAAGGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SAKHTFHARFAIPCNFIVTTCKL*TSARLF Trigger: GAACAGCCTTGCAGAAGTGCAAAGTTTGCACGTAGT...AACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACTGGTCTTTTTATAACTaGGAGTGGAGGATAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHWSFYN*EWRIGA Trigger: TGCCCCTATCCTCCACTCCCAGTTATAAAAAGACCA...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR CAA 90 bp | CAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATaGTTTAAGACACAAATGATAGTGCACTTCCATCCAAAGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: QSIHFTHVLPYRATS*FKTQMIVHFHPKSH Trigger: GTGGCTCTTTGGATGGAAGTGCACTATCATTTGTGTCTTAAACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCAATGAACAGTAGATTATaGGACACAGTGAGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: KFQQSIHFTHVLPYRATSMNSRL*DTVRAE Trigger: TTCTGCTCTCACTGTGTCTCATAATCTACTGTTCAT...TGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATCAAACTTTGCACTTCTaGAAGGCTGTTCATCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: SFSKAYISRTFCHTVQLHQTLHF*KAVHLK Trigger: CTTAAGATGAACAGCCTTGCAGAAGTGCAAAGTTTG...ATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATAGGGTGCAATCCTTATaGTCGGCTATTGAAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: SFSKAYISRTFCHTVQLHRVQSL*SAIEEI Trigger: TATTTCTTCAATAGCCGAGCATAAGGATTGCACCCT...ATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCACCTTGCAGTTTAAAGTaGACCCAATGTCTTAACACA | + |
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Preference number: 2 (lower is better) Translates to: KFQQSIHFTHVLPYRATSPCSLK*TQCLNT Trigger: TGTGTTAAGACATTGGGTCCACTTTAAACTGCAAGG...TGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR CAA 90 bp | GCAAGCATTCTCAAGTTTCAGCAAAGCATACATTTCACGCACGTTTaGCCATACCGTGCAACTTCATTGTTTAAGACACAAATGATAGTG | + |
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Preference number: 2 (lower is better) Translates to: ASILKFQQSIHFTHV*PYRATSLFKTQMIV Trigger: CACTATCATTTGTGTCTTAAACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACTTGAGAATGCTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR TCA 72 bp | TGCTCATTAAGTGGAGGGCCTAACAGGCCATATCTGTaGGTGACTGCCACCTTGCAGTGCTTAGAAGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: CSLSGGPNRPYL*VTATLQCLEGH Trigger: ATGGCCTTCTAAGCACTGCAAGGTGGCAGTCACTCACAGATATGGCCTGTTAGGCCCTCCACTTAATGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR TCA 72 bp | CCTACAGCCAAGTTCAAGGCTACTGTGAACATGAATTaGAGGGCAAACAGAGGGAGAGACGACTCAGGACTA | + |
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Preference number: 3 (lower is better) Translates to: PTAKFKATVNMN*RANRGRDDSGL Trigger: TAGTCCTGAGTCGTCTCTCCCTCTGTTTGCCCTTCAATTCATGTTCACAGTAGCCTTGAACTTGGCTGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR GCA 72 bp | GCTCCAACTGCTCACTACGTGCAAACTTTGCACTTCTaGAAGGCTGTTCATCTTAAGAGTCAGACGAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: APTAHYVQTLHF*KAVHLKSQTSS Trigger: TGAACTCGTCTGACTCTTAAGATGAACAGCCTTGCAGAAGTGCAAAGTTTGCACGTAGTGAGCAGTTGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR CCA 72 bp | GGTTTACAACCTAGTCCTATAATCTCAGGTTTCCTCTaGGATGGCTGTGCAAAGGAAGCAGCTGCTATGAAC | + |
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Preference number: 3 (lower is better) Translates to: GLQPSPIISGFL*DGCAKEAAAMN Trigger: GTTCATAGCAGCTGCTTCCTTTGCACAGCCATCCCAGAGGAAACCTGAGATTATAGGACTAGGTTGTAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR GCA 72 bp | GCACTTCCATCCAAAGAGCCACATTCAGATACAGGGTaGAATCCTTATGCTCGGCTATTGAAGAAATACACA | + |
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Preference number: 3 (lower is better) Translates to: ALPSKEPHSDTG*NPYARLLKKYT Trigger: TGTGTATTTCTTCAATAGCCGAGCATAAGGATTGCACCCTGTATCTGAATGTGGCTCTTTGGATGGAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGACATACAATACAAAAAGTGTTCTGCAAGCATTCTCAAGTTTCAGCAAAGCCAACAGGTTCTAGGTTaGCTTGTGGGAATATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: RDIQYKKCSASILKFQQSQQVLG*LVGISH Trigger: GTGAGATATTCCCACAAGCAAACCTAGAACCTGTTG...GCTTTGCTGAAACTTGAGAATGCTTGCAGAACACTTTTTGTATTGTATGTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR TCA 72 bp | TCTTTTTATAACTGGGAGTGGAGGATAGGGGCAGGATaGCATGTTAAACATACAATTGTGGCTTCCCAATTA | + |
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Preference number: 3 (lower is better) Translates to: SFYNWEWRIGAG*HVKHTIVASQL Trigger: TAATTGGGAAGCCACAATTGTATGTTTAACATGTCATCCTGCCCCTATCCTCCACTCCCAGTTATAAAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR TCA 72 bp | TGTGCAAAGGAAGCAGCTGCTATGAACAGTAGATTATaGGACACAGTGAGAGCAGAACCAAATTTATTAGAA | + |
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Preference number: 3 (lower is better) Translates to: CAKEAAAMNSRL*DTVRAEPNLLE Trigger: TTCTAATAAATTTGGTTCTGCTCTCACTGTGTCTCATAATCTACTGTTCATAGCAGCTGCTTCCTTTGCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR GCA 72 bp | CAAAGAGCCACATTCAGATACAGGGTGCAATCCTTATaGTCGGCTATTGAAGAAATACACATTCTTTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: QRATFRYRVQSL*SAIEEIHILFL Trigger: TAGAAAAAGAATGTGTATTTCTTCAATAGCCGAGCATAAGGATTGCACCCTGTATCTGAATGTGGCTCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR GCA 72 bp | TCAAGTTTCAGCAAAGCATACATTTCACGCACGTTTTaGCATACCGTGCAACTTCATTGTTTAAGACACAAA | + |
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Preference number: 3 (lower is better) Translates to: SSFSKAYISRTF*HTVQLHCLRHK Trigger: TTTGTGTCTTAAACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR GCA 72 bp | TCCAAACGCTTAGACTTTTCCCTAAGAGTATATGTGTaGACACAAATGTGCACAGAGAGACATACAATACAA | + |
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Preference number: 3 (lower is better) Translates to: SKRLDFSLRVYV*TQMCTERHTIQ Trigger: TTGTATTGTATGTCTCTCTGTGCACATTTGTGTGCACACATATACTCTTAGGGAAAAGTCTAAGCGTTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGACATACAATACAAAAAGTGTTCTGCAAGCATTCTCAAGTTTCAGCAAAGCCCTTATGCTCGGCTATaGAAGAAATACACATTCTTT | + |
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Preference number: 3 (lower is better) Translates to: RDIQYKKCSASILKFQQSPYARL*KKYTFF Trigger: AAAGAATGTGTATTTCTTCAATAGCCGAGCATAAGG...GCTTTGCTGAAACTTGAGAATGCTTGCAGAACACTTTTTGTATTGTATGTCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| 3UTR TCA 72 bp | TTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTaGCACAGATTTATCACAAATAACTATTCCGATTTT | + |
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Preference number: 3 (lower is better) Translates to: LMKLSEDHTCCP*HRFITNNYSDF Trigger: AAAATCGGAATAGTTATTTGTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| 3UTR GCA 72 bp | ATGTGCACAGAGAGACATACAATACAAAAAGTGTTCTaGAAGCATTCTCAAGTTTCAGCAAAGCATACATTT | + |
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Preference number: 3 (lower is better) Translates to: MCTERHTIQKVF*KHSQVSAKHTF Trigger: AAATGTATGCTTTGCTGAAACTTGAGAATGCTTGCAGAACACTTTTTGTATTGTATGTCTCTCTGTGCACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| CDS-3UTR GCA 90 bp | CACCTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCACCTCCTCCCGTTTGTaGCGGTCAGGGGCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: HLAVLRRPLHYRDSAPTATSSRL*RSGADH Trigger: GTGGTCAGCCCCTGACCGGCACAAACGGGAGGAGGT...GGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR GCA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTTGGAGGCCTCCAACTTaGCGAGCCACCGGTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSWRPPT*RATGPC Trigger: ACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCA...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTACAGCGCTGTTGGAATaGGTGACCAGCCTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSTALLE*VTSLQP Trigger: TGGCTGCAGGCTGGTCACCCATTCCAACAGCGCTGT...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR GCA 90 bp | CACCTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGGAGCAAGGGAACTaGCGGAGGATCTGCCACACG | + |
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Preference number: 4 (lower is better) Translates to: HLAVLRRPLHYRDSAPTAKEQGN*RRICHT Trigger: CGTGTGGCAGATCCTCCGGCAGTTCCCTTGCTCCTT...GGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR TCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCGCTGCTGCAATAGGCTaGCTGTGCACAGCGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFAAAIG*LCTALL Trigger: CAACAGCGCTGTGCACAGTCAGCCTATTGCAGCAGC...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR GCA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTCCCACTTCTGCTTGCTaGTGCAATAGGCTGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSPTSAC*CNRLTV Trigger: CACAGTCAGCCTATTGCAGCAGCAAGCAGAAGTGGG...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGGACAGGATCAGGTGGTaGCCTGTCAGACACAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKDRIRW*PVRHRV Trigger: GACCCTGTGTCTGACAGGCCACCACCTGATCCTGTC...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTGCGTCGATATTTGAATaGAGGAGCCAGAGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSASIFE*RSQSSS Trigger: GGAGGAGCTCTGGCTCCTCCATTCAAATATCGACGC...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CACCTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCGGTTCCAGGATGATCTaGGCCAGAGAAGTCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: HLAVLRRPLHYRDSAPTAGSRMI*AREVTC Trigger: GCAGGTGACTTCTCTGGCCCAGATCATCCTGGAACC...GGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR TCA 90 bp | AGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCAAGGCTACTGTGAAGGGTACATCAGGGTaGCCGAGTCCAGAGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: RPLHYRDSAPTAKFKATVKGTSG*PSPEWT Trigger: TGTCCACTCTGGACTCGGTCACCCTGATGTACCCTT...CACAGTAGCCTTGAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR TCA 90 bp | AGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCAAGGCTACTGTGCGGACTTGGGCACAATaGCAGTTGGTGGGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLHYRDSAPTAKFKATVRTWAQ*QLVGRK Trigger: CTTCCTACCCACCAACTGTCATTGTGCCCAAGTCCG...CACAGTAGCCTTGAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCCTCTCAATGGACTTGTaGATCCGCCTCCACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFLSMDL*IRLHWG Trigger: TCCCCAGTGGAGGCGGATTCACAAGTCCATTGAGAG...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTTGCTACCTTCCGAAGTaGTTCGTCATCGACGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSCYLPK*FVIDGL Trigger: AAGTCCGTCGATGACGAAGCACTTCGGAAGGTAGCA...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCGCTTCTCGTCTTCCTTaGACCTCCTCCCGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFASRLP*TSSRLC Trigger: GCACAAACGGGAGGAGGTGCAAGGAAGACGAGAAGC...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR TCA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTCCCATGAATCAACACTaGTGCACCTTCCCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSPMNQH*CTFPVN Trigger: ATTGACAGGGAAGGTGCATCAGTGTTGATTCATGGG...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR TCA 90 bp | GGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACAGCACCACCTCAAAGAGTGGATTGGTaGACTTACTCAGCTCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GNSIGHRCHICSEVTAPPQRVDW*TYSARR Trigger: CCGGCGAGCTGAGTAAGTTCACCAATCCACTCTTTG...AGGTGGTGCTGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | GGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACAGCACCACCTGTAGCCACGCTTTCCTaGCCTGAGGGTGGCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GNSIGHRCHICSEVTAPPVATLS*PEGGIY Trigger: ATAAATGCCACCCTCAGGGCAGGAAAGCGTGGCTAC...AGGTGGTGCTGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCTGTGTGTCAGCCAATTaGAGGCCTCCAACTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFCVSAN*RPPTCR Trigger: TCGGCAAGTTGGAGGCCTCCAATTGGCTGACACACA...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| 3UTR CAA 72 bp | GCACAATGCCACCTCATCACAAGTCACGGCCAACCCTaGACCTGCAAGAGGCTAGAGAGAAAGGTTATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQCHLITSHGQP*TCKRLERKVIN Trigger: GTTGATAACCTTTCTCTCTAGCCTCTTGCAGGTCAAGGGTTGGCCGTGACTTGTGATGAGGTGGCATTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| CDS-3UTR GCA 90 bp | CTAGAGATGGGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACACCCATGTCGGAAGGCTaGTACCTTCCGAAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEMGNSIGHRCHICSEVTPMSEG*YLPKCF Trigger: GAAGCACTTCGGAAGGTAGCAGCCTTCCGACATGGG...TGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCCCATCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCCCTTTGGCTCTAGCTTaGTGGGCCACATTTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFPLALA*WATFRD Trigger: ATCCCTAAATGTGGCCCAGCAAGCTAGAGCCAAAGG...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGGCCAGAGAAGTCACCTaGAGTGTGGAATCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKAREVT*SVESVP Trigger: AGGAACTGATTCCACACTGCAGGTGACTTCTCTGGC...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CCA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGGGGCACAATGACAGTTaGTGGGTAGGAAGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKGHNDS*WVGRTD Trigger: ATCTGTCCTTCCTACCCACCAACTGTCATTGTGCCC...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCAAGGCTACTGTGTTGGCTCTAGCTTGCTaGGCCACATTTAGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLHYRDSAPTAKFKATVLALAC*ATFRDL Trigger: CAGATCCCTAAATGTGGCCCAGCAAGCTAGAGCCAA...CACAGTAGCCTTGAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR TCA 90 bp | CTAGAGATGGGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACAGATGGCGTCGATATTTaGATGGAGGAGCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEMGNSIGHRCHICSEVTDGVDI*MEEPEL Trigger: GAGCTCTGGCTCCTCCATTCAAATATCGACGCCATC...TGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCCCATCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCGAATGTCCCGAACTGTaGGGCATAAGCATGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFECPEL*GISMLK Trigger: TTTGAGCATGCTTATGCCTCACAGTTCGGGACATTC...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCGGGCCGATTGACCCATaGCCACAAAGACATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFGPIDP*PQRHCF Trigger: AAAACAATGTCTTTGTGGTCATGGGTCAATCGGCCC...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACAACTGCCGGAGGATCTaGCACACGCAGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHNCRRI*HTQSRK Trigger: CTTCCTGGACTGCGTGTGGCAGATCCTCCGGCAGTT...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTTTTCACTTTCATTGTTaGCCAGGAATGTCCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSFHFHC*PGMSRT Trigger: AGTTCGGGACATTCCTGGGCAACAATGAAAGTGAAA...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CTAGAGATGGGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACACCTCAAAGCCTCGGATaGTCCTGCTTCTTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEMGNSIGHRCHICSEVTPQSLG*SCFLVP Trigger: TGGAACCAAGAAGCAGGACCATCCGAGGCTTTGAGG...TGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCCCATCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR TCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACCACGCTTTCCTGCCCTaGGGGTGGCATTTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHHAFLP*GWHLSA Trigger: AGCTGATAAATGCCACCCTCAGGGCAGGAAAGCGTG...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR TCA 90 bp | AGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCAAGGCTACTGTGATGCTTCCACGAGTTTaGTTAGGCTCTCCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPLHYRDSAPTAKFKATVMLPRV*LGSPEE Trigger: TTCTTCAGGAGAGCCTAATCAAACTCGTGGAAGCAT...CACAGTAGCCTTGAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR TCA 90 bp | CAAGAGGCTATTTCTCAATGTCATATACCAAGTGACAAACCAACTCAGGGGAACGTTCCAGCTCTGGAGTaGGTGCTGTCTTCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QEAISQCHIPSDKPTQGNVPALE*VLSSGQ Trigger: TTGGCCTGAAGACAGCACTCACTCCAGAGCTGGAAC...GTTCCCCTGAGTTGGTTTGTCACTTGGTATATGACATTGAGAAATAGCCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| CDS-3UTR TCA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTGATTAGGCTCTCCTaGAGAACATGGTATCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKLIRLS*RTWYLS Trigger: TGAGAGATACCATGTTCTTCAGGAGAGCCTAATCAA...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR GCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACCCTCCCACTTCTGCTTaGTGCTGCAATAGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHPPTSA*CCNRLT Trigger: AGTCAGCCTATTGCAGCAGCAAGCAGAAGTGGGAGG...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGCAATCACTTCAAACATaGGTCGGTAGAAGAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKQSLQT*VGRRKG Trigger: ACCCTTTCTTCTACCGACCCATGTTTGAAGTGATTG...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACGATGGTCCTGCTTCTTaGTTCCAGGATGATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHDGPAS*FQDDLG Trigger: GCCCAGATCATCCTGGAACCAAGAAGCAGGACCATC...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR TCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACTTCTTGGTTCCAGGATaGTCTGGGCCAGAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHFLVPG*SGPEKS Trigger: TGACTTCTCTGGCCCAGATCATCCTGGAACCAAGAA...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACCACATTGTCTACCCGTaGGGTTTTAATCAGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHHIVYP*GFNQLR Trigger: GCGGAGCTGATTAAAACCCCACGGGTAGACAATGTG...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR GCA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGAGCATGATGAGAAAATaGTCATTAAACTCGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKSMMRK*SLNSKE Trigger: CTCCTTCGAGTTTAATGAGCATTTTCTCATCATGCT...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CCA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCATGCCTCAATGGAACTaGCTATATTTAAACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFMPQWN*LYLNTP Trigger: AGGAGTGTTTAAATATAGCCAGTTCCATTGAGGCAT...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCAAGGCTACTGTGTGGACAATGCCTCAATaGAACTGGCTATATTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLHYRDSAPTAKFKATVWTMPQ*NWLYLN Trigger: GTTTAAATATAGCCAGTTCCATTGAGGCATTGTCCA...CACAGTAGCCTTGAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACAAGTCACCTGCAGTGTaGAATCAGTTCCTTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHKSPAV*NQFLLS Trigger: GGACAGAAGGAACTGATTCCACACTGCAGGTGACTT...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| 3UTR CAA 72 bp | TACAAATCTCTAAGGACTAAGCAACAGGTTCTAGGTTaGCTTGTGGGAATATCTCACCTTCCCCAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKSLRTKQQVLG*LVGISHLPQAL Trigger: CAAGGCTTGGGGAAGGTGAGATATTCCCACAAGCAAACCTAGAACCTGTTGCTTAGTCCTTAGAGATTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| CDS-3UTR TCA 90 bp | ACACAAATGTGCACAGAGAGACATACAATACAAAAAGTGTTCTGCAAGCATTCTCAAAGAGTGGATTGGTaGACTTACTCAGCTCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TQMCTERHTIQKVFCKHSQRVDW*TYSARR Trigger: CCGGCGAGCTGAGTAAGTTCACCAATCCACTCTTTG...AGAATGCTTGCAGAACACTTTTTGTATTGTATGTCTCTCTGTGCACATTTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| CDS-3UTR CCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACCACCGGTCCATGTTGTaGGTTTGTTCATTACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHHRSML*VCSLHA Trigger: AGCATGTAATGAACAAACCCACAACATGGACCGGTG...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACTCAGGAAGGAAAGAATaGCAGCCATCTTCAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHSGRKE*QPSSIT Trigger: AGTGATTGAAGATGGCTGGCATTCTTTCCTTCCTGA...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCATTTCACTTTCATTGTTaGCCAGGAATGTCCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KFQQSIHFTHVLPYRATSFHFHC*PGMSRT Trigger: AGTTCGGGACATTCCTGGGCAACAATGAAAGTGAAA...TGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| 3UTR CAA 72 bp | CATTTCACGCACGTTTTGCCATACCGTGCAACTTCATaGTTTAAGACACAAATGATAGTGCACTTCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFTHVLPYRATS*FKTQMIVHFHP Trigger: TGGATGGAAGTGCACTATCATTTGTGTCTTAAACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGTGCACAGAGAGACATACAATACAAAAAGTGTTCTGCAAGCATTCTCAAGGGCCGATTGACCCATaGCCACAAAGACATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QMCTERHTIQKVFCKHSQGPIDP*PQRHCF Trigger: AAAACAATGTCTTTGTGGTCATGGGTCAATCGGCCC...TTGAGAATGCTTGCAGAACACTTTTTGTATTGTATGTCTCTCTGTGCACATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| CDS-3UTR GCA 90 bp | CTTAATGAAGTTATCAGAGGACCACACCTGTTGCCCTTGACACAGATTTATCACAACCATTTCCTCATATaGTTCATCCAGATACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNEVIRGPHLLPLTQIYHNHFLI*FIQILG Trigger: TCCAAGTATCTGGATGAAGCATATGAGGAAATGGTT...GTGATAAATCTGTGTCAAGGGCAACAGGTGTGGTCCTCTGATAACTTCATTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGCTATTTCTCAATGTCATATACCAAGTGACAAACCAACTCAGGGGAACAACCATTTCCTCATATaGTTCATCCAGATACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEAISQCHIPSDKPTQGNNHFLI*FIQILG Trigger: TCCAAGTATCTGGATGAAGCATATGAGGAAATGGTT...GTTCCCCTGAGTTGGTTTGTCACTTGGTATATGACATTGAGAAATAGCCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| 3UTR CAA 72 bp | CTCAAGTTTCAGCAAAGCATACATTTCACGCACGTTTaGCCATACCGTGCAACTTCATTGTTTAAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LKFQQSIHFTHV*PYRATSLFKTQ Trigger: TTGTGTCTTAAACAATGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| CDS TCA 90 bp | TGTCAATGCACTGGGCCGCCAGGCAGGCGGTGGTCAGAATCTCCTTaGTGTGTGTCAGCCAATTGGAGGCCTCCAACTTGCCGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CQCTGPPGRRWSESP*CVSANWRPPTCRAT Trigger: GGTGGCTCGGCAAGTTGGAGGCCTCCAATTGGCTGACACACATCAAGGAGATTCTGACCACCGCCTGCCTGGCGGCCCAGTGCATTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS GCA 90 bp | GCGTCGATATTTGAATGGAGGAGCCAGAGCTCCTCCGTGTTGTCCTaGCGGGAAGACAGGATCAGGTGGTGGCCTGTCAGACACAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASIFEWRSQSSSVLS*REDRIRWWPVRHRV Trigger: GACCCTGTGTCTGACAGGCCACCACCTGATCCTGTCTTCCCGGCAGGACAACACGGAGGAGCTCTGGCTCCTCCATTCAAATATCGACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 90 bp | CACCTGCAGTGTGGAATCAGTTCCTTCTGTCCCATGAATCAACACTaGTGCACCTTCCCTGTCAATGCACTGGGCCGCCAGGCAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLQCGISSFCPMNQH*CTFPVNALGRQAGG Trigger: ACCGCCTGCCTGGCGGCCCAGTGCATTGACAGGGAAGGTGCATCAGTGTTGATTCATGGGACAGAAGGAACTGATTCCACACTGCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CCA 90 bp | CTCCCTCTCTATCAGGGCCTCAAAGCCTCGGATGGTCCTGCTTCTTaGTTCCAGGATGATCTGGGCCAGAGAAGTCACCTGCAGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPLYQGLKASDGPAS*FQDDLGQRSHLQCG Trigger: TCCACACTGCAGGTGACTTCTCTGGCCCAGATCATCCTGGAACCAAGAAGCAGGACCATCCGAGGCTTTGAGGCCCTGATAGAGAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CAA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTGCACCTCCTCCCGTTaGTGCCGGTCAGGGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKCTSSR*CRSGAD Trigger: GTCAGCCCCTGACCGGCACAAACGGGAGGAGGTGCA...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 90 bp | GGTACCCAGAGAGCCCACAAATCGTTTGTCGATGGCGTCGATATTTaGATGGAGGAGCCAGAGCTCCTCCGTGTTGTCCTGCCGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTQRAHKSFVDGVDI*MEEPELLRVVLPGR Trigger: TCTTCCCGGCAGGACAACACGGAGGAGCTCTGGCTCCTCCATTCAAATATCGACGCCATCGACAAACGATTTGTGGGCTCTCTGGGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CAA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCCAGAGCTCCTCCGTGTaGTCCTGCCGGGAAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFQSSSV*SCREDR Trigger: CCTGTCTTCCCGGCAGGACAACACGGAGGAGCTCTG...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CAA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCTTGGAGGCCTCCAACTaGCCGAGCCACCGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFLEASN*PSHRSM Trigger: CATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAA...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 90 bp | GCCAGAGAAGTCACCTGCAGTGTGGAATCAGTTCCTTCTGTCCCATaGATCAACACTGATGCACCTTCCCTGTCAATGCACTGGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AREVTCSVESVPSVP*INTDAPSLSMHWAA Trigger: GGCGGCCCAGTGCATTGACAGGGAAGGTGCATCAGTGTTGATTCATGGGACAGAAGGAACTGATTCCACACTGCAGGTGACTTCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 90 bp | TCAGGGCCTCAAAGCCTCGGATGGTCCTGCTTCTTGGTTCCAGGATaGTCTGGGCCAGAGAAGTCACCTGCAGTGTGGAATCAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGPQSLGWSCFLVPG*SGPEKSPAVWNQFL Trigger: AAGGAACTGATTCCACACTGCAGGTGACTTCTCTGGCCCAGATCATCCTGGAACCAAGAAGCAGGACCATCCGAGGCTTTGAGGCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CCA 90 bp | GCCTCAAAGCCTCGGATGGTCCTGCTTCTTGGTTCCAGGATGATCTaGGCCAGAGAAGTCACCTGCAGTGTGGAATCAGTTCCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKPRMVLLLGSRMI*AREVTCSVESVPSV Trigger: GACAGAAGGAACTGATTCCACACTGCAGGTGACTTCTCTGGCCCAGATCATCCTGGAACCAAGAAGCAGGACCATCCGAGGCTTTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CAA 90 bp | CGACTCAGGACTAGACAGGTCCTCAGGACAGGTAGGCGATCTTTCAAGGACTCTAGCTTCTCGTCTTCCTaGCACCTCCTCCCGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLRTRQVLRTGRRSFKDSSFSSS*HLLPFV Trigger: CACAAACGGGAGGAGGTGCAAGGAAGACGAGAAGCT...AGAGTCCTTGAAAGATCGCCTACCTGTCCTGAGGACCTGTCTAGTCCTGAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CAA 90 bp | GGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACAGCACCACCTTCAAAGCCACCTCCTTaGGCTCTAGCTTGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GNSIGHRCHICSEVTAPPSKPPP*ALACWA Trigger: GGCCCAGCAAGCTAGAGCCAAAGGAGGTGGCTTTGA...AGGTGGTGCTGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CCA 90 bp | AGCCAATTGGAGGCCTCCAACTTGCCGAGCCACCGGTCCATGTTGTaGGTTTGTTCATTACATGCTTCCACGAGTTTGATTAGGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQLEASNLPSHRSML*VCSLHASTSLIRLS Trigger: GGAGAGCCTAATCAAACTCGTGGAAGCATGTAATGAACAAACCCACAACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAATTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CAA 90 bp | GGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACAGCACCACCTCGGTGCAGCACCACATaGTCTACCCGTGGGGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GNSIGHRCHICSEVTAPPRCSTT*STRGVL Trigger: TAAAACCCCACGGGTAGACAATGTGGTGCTGCACCG...AGGTGGTGCTGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CAA 90 bp | CTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGATGTGTGTCAGCCAATaGGAGGCCTCCAACTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LAVLRRPLHYRDSAPTAKMCVSQ*EASNLP Trigger: CGGCAAGTTGGAGGCCTCCAATTGGCTGACACACAT...CTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CAA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCCGATGGCGTCGATATTaGAATGGAGGAGCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFRWRRY*NGGARA Trigger: AGCTCTGGCTCCTCCATTCAAATATCGACGCCATCG...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CAA 90 bp | CACCTTGCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCGTGGTCAGAATCTCCTaGATGTGTGTCAGCCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: HLAVLRRPLHYRDSAPTAVVRIS*MCVSQL Trigger: CAATTGGCTGACACACATCAAGGAGATTCTGACCAC...GGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGCAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CAA 90 bp | AGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCAAGGCTACTGTGAGCCACCGGTCCATGTaGTGGGTTTGTTCATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLHYRDSAPTAKFKATVSHRSM*WVCSLH Trigger: ATGTAATGAACAAACCCACAACATGGACCGGTGGCT...CACAGTAGCCTTGAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS-3UTR CAA 90 bp | AGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCAAGGCTACTGTGCTTTCACTTTCATTGTaGCCCAGGAATGTCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLHYRDSAPTAKFKATVLSLSL*PRNVPN Trigger: GTTCGGGACATTCCTGGGCAACAATGAAAGTGAAAG...CACAGTAGCCTTGAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS TCA 90 bp | CAATCACTTCAAACATGGGTCGGTAGAAGAAAGGGTACATCAGGGTaGCCGAGTCCAGAGTGGACAATGCCTCAATGGAACTGGCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: QSLQTWVGRRKGTSG*PSPEWTMPQWNWLY Trigger: ATATAGCCAGTTCCATTGAGGCATTGTCCACTCTGGACTCGGTCACCCTGATGTACCCTTTCTTCTACCGACCCATGTTTGAAGTGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CCA 90 bp | CCGAAGTGCTTCGTCATCGACGGACTTGGGCACAATGACAGTTGGTaGGTAGGAAGGACAGATAGAAAAGTCCTTATTGATATAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PKCFVIDGLGHNDSW*VGRTDRKVLIDIAQ Trigger: CTGAGCTATATCAATAAGGACTTTTCTATCTGTCCTTCCTACCCACCAACTGTCATTGTGCCCAAGTCCGTCGATGACGAAGCACTTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CAA 90 bp | GCAGTGCTTAGAAGGCCATTACATTACAGGGATTCCGCACCTACAGCCAAGTTCCTCAGGACATTGACCTaGGCTTGTAACTCCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: AVLRRPLHYRDSAPTAKFLRTLT*ACNSLL Trigger: TAACAAGGAGTTACAAGCCAAGGTCAATGTCCTGAG...GAACTTGGCTGTAGGTGCGGAATCCCTGTAATGTAATGGCCTTCTAAGCACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CAA 90 bp | GGGAACAGCATAGGGCATAGGTGTCATATATGTAGTGAGGTGACAGCACCACCTGTAGAACTCAAATTCTaGCTCAGGAAGGAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GNSIGHRCHICSEVTAPPVELKF*LRKERM Trigger: CATTCTTTCCTTCCTGAGCAAGAATTTGAGTTCTAC...AGGTGGTGCTGTCACCTCACTACATATATGACACCTATGCCCTATGCTGTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS-3UTR CAA 90 bp | AAGTTTCAGCAAAGCATACATTTCACGCACGTTTTGCCATACCGTGCAACTTCACTTTCACTTTCATTGTaGCCCAGGAATGTCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KFQQSIHFTHVLPYRATSLSLSL*PRNVPN Trigger: GTTCGGGACATTCCTGGGCAACAATGAAAGTGAAAG...TGAAGTTGCACGGTATGGCAAAACGTGCGTGAAATGTATGCTTTGCTGAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| CDS CAA 90 bp | CTGTCAATGCACTGGGCCGCCAGGCAGGCGGTGGTCAGAATCTCCTaGATGTGTGTCAGCCAATTGGAGGCCTCCAACTTGCCGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSMHWAARQAVVRIS*MCVSQLEASNLPSH Trigger: GTGGCTCGGCAAGTTGGAGGCCTCCAATTGGCTGACACACATCAAGGAGATTCTGACCACCGCCTGCCTGGCGGCCCAGTGCATTGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS TCA 72 bp | ACTGGGCCGCCAGGCAGGCGGTGGTCAGAATCTCCTTaGTGTGTGTCAGCCAATTGGAGGCCTCCAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGPPGRRWSESP*CVSANWRPPTC Trigger: GCAAGTTGGAGGCCTCCAATTGGCTGACACACATCAAGGAGATTCTGACCACCGCCTGCCTGGCGGCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS GCA 72 bp | AGCTCTGGAGTGAGTGCTGTCTTCAGGCCAACACAGTaGAGTAAGAGCGCAGACCTCGGGCTCACGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGVSAVFRPTQ*SKSADLGLTGA Trigger: AGCACCCGTGAGCCCGAGGTCTGCGCTCTTACTGCACTGTGTTGGCCTGAAGACAGCACTCACTCCAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
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| CDS CAA 72 bp | CACTGGGCCGCCAGGCAGGCGGTGGTCAGAATCTCCTaGATGTGTGTCAGCCAATTGGAGGCCTCCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: HWAARQAVVRIS*MCVSQLEASNL Trigger: CAAGTTGGAGGCCTCCAATTGGCTGACACACATCAAGGAGATTCTGACCACCGCCTGCCTGGCGGCCCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CAA 90 bp | GCCAGGCAGGCGGTGGTCAGAATCTCCTTGATGTGTGTCAGCCAATaGGAGGCCTCCAACTTGCCGAGCCACCGGTCCATGTTGTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ARQAVVRISLMCVSQ*EASNLPSHRSMLWV Trigger: AACCCACAACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAATTGGCTGACACACATCAAGGAGATTCTGACCACCGCCTGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CAA 90 bp | TCGATGGCGTCGATATTTGAATGGAGGAGCCAGAGCTCCTCCGTGTaGTCCTGCCGGGAAGACAGGATCAGGTGGTGGCCTGTCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SMASIFEWRSQSSSV*SCREDRIRWWPVRH Trigger: GTGTCTGACAGGCCACCACCTGATCCTGTCTTCCCGGCAGGACAACACGGAGGAGCTCTGGCTCCTCCATTCAAATATCGACGCCATCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CAA 72 bp | GCGGTGGTCAGAATCTCCTTGATGTGTGTCAGCCAATaGGAGGCCTCCAACTTGCCGAGCCACCGGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: AVVRISLMCVSQ*EASNLPSHRSM Trigger: CATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAATTGGCTGACACACATCAAGGAGATTCTGACCACCGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS GCA 72 bp | TCCCATGAATCAACACTGATGCACCTTCCCTGTCAATaGACTGGGCCGCCAGGCAGGCGGTGGTCAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: SHESTLMHLPCQ*TGPPGRRWSES Trigger: AGATTCTGACCACCGCCTGCCTGGCGGCCCAGTGCATTGACAGGGAAGGTGCATCAGTGTTGATTCATGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS GCA 72 bp | AGAGAAGAAACACGGGGGCCTCCCACTTCTGCTTGCTaGTGCAATAGGCTGACTGTGCACAGCGCTGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: REETRGPPTSAC*CNRLTVHSAVG Trigger: TCCAACAGCGCTGTGCACAGTCAGCCTATTGCAGCAGCAAGCAGAAGTGGGAGGCCCCCGTGTTTCTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS GCA 72 bp | GGAAGAGAAGAAACACGGGGGCCTCCCACTTCTGCTTaGTGCTGCAATAGGCTGACTGTGCACAGCGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GREETRGPPTSA*CCNRLTVHSAV Trigger: AACAGCGCTGTGCACAGTCAGCCTATTGCAGCAGCAAGCAGAAGTGGGAGGCCCCCGTGTTTCTTCTCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CAA 72 bp | TCGATATTTGAATGGAGGAGCCAGAGCTCCTCCGTGTaGTCCTGCCGGGAAGACAGGATCAGGTGGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SIFEWRSQSSSV*SCREDRIRWWP Trigger: AGGCCACCACCTGATCCTGTCTTCCCGGCAGGACAACACGGAGGAGCTCTGGCTCCTCCATTCAAATATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CAA 90 bp | TGGTACCCAGAGAGCCCACAAATCGTTTGTCGATGGCGTCGATATTaGAATGGAGGAGCCAGAGCTCCTCCGTGTTGTCCTGCCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WYPESPQIVCRWRRY*NGGARAPPCCPAGK Trigger: CTTCCCGGCAGGACAACACGGAGGAGCTCTGGCTCCTCCATTCAAATATCGACGCCATCGACAAACGATTTGTGGGCTCTCTGGGTACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CCA 72 bp | TATCAGGGCCTCAAAGCCTCGGATGGTCCTGCTTCTTaGTTCCAGGATGATCTGGGCCAGAGAAGTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: YQGLKASDGPAS*FQDDLGQRSHL Trigger: CAGGTGACTTCTCTGGCCCAGATCATCCTGGAACCAAGAAGCAGGACCATCCGAGGCTTTGAGGCCCTGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS TCA 72 bp | AGAGCCCACAAATCGTTTGTCGATGGCGTCGATATTTaGATGGAGGAGCCAGAGCTCCTCCGTGTTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAHKSFVDGVDI*MEEPELLRVVL Trigger: CAGGACAACACGGAGGAGCTCTGGCTCCTCCATTCAAATATCGACGCCATCGACAAACGATTTGTGGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS TCA 72 bp | TCCTTGCACCTCCTCCCGTTTGTGCCGGTCAGGGGCTaGCCACTTCGCATAATCACCATGCCATTCTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLHLLPFVPVRG*PLRIITMPFFL Trigger: TAAAAAGAATGGCATGGTGATTATGCGAAGTGGTCAGCCCCTGACCGGCACAAACGGGAGGAGGTGCAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS GCA 72 bp | GCCTCCTGTTCAAAGCCACCTCCTTTGGCTCTAGCTTaGTGGGCCACATTTAGGGATCTGGTGTCAATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASCSKPPPLALA*WATFRDLVSIR Trigger: CCTTATTGACACCAGATCCCTAAATGTGGCCCAGCAAGCTAGAGCCAAAGGAGGTGGCTTTGAACAGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CAA 72 bp | GAGAGCCCACAAATCGTTTGTCGATGGCGTCGATATTaGAATGGAGGAGCCAGAGCTCCTCCGTGTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ESPQIVCRWRRY*NGGARAPPCCP Trigger: AGGACAACACGGAGGAGCTCTGGCTCCTCCATTCAAATATCGACGCCATCGACAAACGATTTGTGGGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CAA 72 bp | TTGGAGGCCTCCAACTTGCCGAGCCACCGGTCCATGTaGTGGGTTTGTTCATTACATGCTTCCACGAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LEASNLPSHRSM*WVCSLHASTSL Trigger: CAAACTCGTGGAAGCATGTAATGAACAAACCCACAACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CAA 90 bp | GTCAGCCAATTGGAGGCCTCCAACTTGCCGAGCCACCGGTCCATGTaGTGGGTTTGTTCATTACATGCTTCCACGAGTTTGATTAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VSQLEASNLPSHRSM*WVCSLHASTSLIRL Trigger: GAGCCTAATCAAACTCGTGGAAGCATGTAATGAACAAACCCACAACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAATTGGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CAA 90 bp | GTCAGAATCTCCTTGATGTGTGTCAGCCAATTGGAGGCCTCCAACTaGCCGAGCCACCGGTCCATGTTGTGGGTTTGTTCATTACATGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRISLMCVSQLEASN*PSHRSMLWVCSLHA Trigger: AGCATGTAATGAACAAACCCACAACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAATTGGCTGACACACATCAAGGAGATTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 72 bp | CAAACATGGGTCGGTAGAAGAAAGGGTACATCAGGGTaGCCGAGTCCAGAGTGGACAATGCCTCAATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QTWVGRRKGTSG*PSPEWTMPQWN Trigger: GTTCCATTGAGGCATTGTCCACTCTGGACTCGGTCACCCTGATGTACCCTTTCTTCTACCGACCCATGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 72 bp | CACTCTGTTGAGATGATGGGTGTTCCAGCTCTGGAGTaGGTGCTGTCTTCAGGCCAACACAGTGCAGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HSVEMMGVPALE*VLSSGQHSAVR Trigger: TCTTACTGCACTGTGTTGGCCTGAAGACAGCACTCACTCCAGAGCTGGAACACCCATCATCTCAACAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225449.2 |
||
| CDS CCA 72 bp | GAGGCCTCCAACTTGCCGAGCCACCGGTCCATGTTGTaGGTTTGTTCATTACATGCTTCCACGAGTTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: EASNLPSHRSML*VCSLHASTSLI Trigger: AATCAAACTCGTGGAAGCATGTAATGAACAAACCCACAACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 72 bp | GTCACCTGCAGTGTGGAATCAGTTCCTTCTGTCCCATaGATCAACACTGATGCACCTTCCCTGTCAATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VTCSVESVPSVP*INTDAPSLSMH Trigger: GTGCATTGACAGGGAAGGTGCATCAGTGTTGATTCATGGGACAGAAGGAACTGATTCCACACTGCAGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS CCA 72 bp | TGCTTCGTCATCGACGGACTTGGGCACAATGACAGTTaGTGGGTAGGAAGGACAGATAGAAAAGTCCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: CFVIDGLGHNDS*WVGRTDRKVLI Trigger: AATAAGGACTTTTCTATCTGTCCTTCCTACCCACCAACTGTCATTGTGCCCAAGTCCGTCGATGACGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
||
| CDS TCA 72 bp | TTCACTTTCATTGTTGCCCAGGAATGTCCCGAACTGTaGGGCATAAGCATGCTCAAAGAGCATGATGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: FTFIVAQECPEL*GISMLKEHDEK Trigger: TTTCTCATCATGCTCTTTGAGCATGCTTATGCCTCACAGTTCGGGACATTCCTGGGCAACAATGAAAGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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| CDS CAA 90 bp | GCTCAGTCTCCATTCACTGGTAGCAGAAGAGTAGAACTCAAATTCTaGCTCAGGAAGGAAAGAATGCCAGCCATCTTCAATCACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: AQSPFTGSRRVELKF*LRKERMPAIFNHFK Trigger: TTTGAAGTGATTGAAGATGGCTGGCATTCTTTCCTTCCTGAGCAAGAATTTGAGTTCTACTCTTCTGCTACCAGTGAATGGAGACTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058679.7 |
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