Pregenerated sensors for MTMR7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039431Ensembl transcript IDs: ENSMUST00000048890.17, ENSMUST00000048898.17, ENSMUST00000173487.8, ENSMUST00000173957.2, ENSMUST00000174205.8
Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATaGTCACCACCACTGGGAGATCGACAGCTCAAATCCTCCACCCCA | + |
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Preference number: 1 (lower is better) Translates to: ASSESRSLPLSSLGA*SPPLGDRQLKSSTP Trigger: TGGGGTGGAGGATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR GCA 90 bp | CACAGCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTaGATGCTCACCACCACTGGGAGATCGACAGCTCAAATCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: HSFVRVPVLATVFAG*MLTTTGRSTAQILH Trigger: GTGGAGGATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR CCA 90 bp | CCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATGCTCACCACCACTaGGAGATCGACAGCTCAAATCCTCCACCCCAGACTCTTGATCAC | + |
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Preference number: 1 (lower is better) Translates to: PGPCHCLRWVHAHHH*EIDSSNPPPQTLDH Trigger: GTGATCAAGAGTCTGGGGTGGAGGATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR CCA 90 bp | GAAACACAGCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTaGGTGCATGCTCACCACCACTGGGAGATCGACAGCTCAAATCCT | + |
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Preference number: 1 (lower is better) Translates to: ETQLRPSPGPCHCLR*VHAHHHWEIDSSNP Trigger: AGGATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR TCA 90 bp | GCTGTTCCCACTGTAATCCTGAGGGGTGTTGGCTGTGCTGTGGTCTaGGGTAGAGAACCCCGAGTGTTTGCTGGGCTCACTTTGCTTACT | + |
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Preference number: 1 (lower is better) Translates to: AVPTVILRGVGCAVV*GREPRVFAGLTLLT Trigger: AGTAAGCAAAGTGAGCCCAGCAAACACTCGGGGTTCTCTACCTCAGACCACAGCACAGCCAACACCCCTCAGGATTACAGTGGGAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR CCA 90 bp | GGGTTAGAATCAGAGCAGAATCTTCATCACCCTGGGACGGGCTCCTaGATGGGAAGGACTTGCTGTTCCCACTGTAATCCTGAGGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: GLESEQNLHHPGTGS*MGRTCCSHCNPEGC Trigger: ACACCCCTCAGGATTACAGTGGGAACAGCAAGTCCTTCCCATCCAGGAGCCCGTCCCAGGGTGATGAAGATTCTGCTCTGATTCTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR TCA 90 bp | TTTCTGTGTCTTTTACTTTGGAACTCCAAAGGGGAACTTAGGCAGTaGGAAACACAGCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: FLCLLLWNSKGELRQ*ETQLRPSPGPCHCL Trigger: AAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTTCTCACTGCCTAAGTTCCCCTTTGGAGTTCCAAAGTAAAAGACACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR GCA 90 bp | CAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATaGCAGGAAAGACTGTCTGGACAACCTTGGGTGAAGATACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QVWEKPGGLLSRHML*QERLSGQPWVKILS Trigger: AGAGAGTATCTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR TCA 90 bp | TCCAAAACCTGGAGGAAGGAAGGAAGGATAGCACATATCCCAGTCTaGAAGCCCACAATCCCAAGTCTTGTCTTCAGTATCACAGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: SKTWRKEGRIAHIPV*KPTIPSLVFSITAQ Trigger: TTGGGCTGTGATACTGAAGACAAGACTTGGGATTGTGGGCTTTCAGACTGGGATATGTGCTATCCTTCCTTCCTTCCTCCAGGTTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR CCA 90 bp | TCACTATTCACTGAGAGGTCGGGGTCTGAGCTTTTTAAATTGTCTTaGGTTAGAATCAGAGCAGAATCTTCATCACCCTGGGACGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SLFTERSGSELFKLS*VRIRAESSSPWDGL Trigger: GAGCCCGTCCCAGGGTGATGAAGATTCTGCTCTGATTCTAACCCAAGACAATTTAAAAAGCTCAGACCCCGACCTCTCAGTGAATAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR GCA 90 bp | ATGTCCCATGTAAAGCAATGCAGAGAGAAACAGCACTGCCAGAAATaGCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGT | + |
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Preference number: 1 (lower is better) Translates to: MSHVKQCREKQHCQK*QNQIATHLPWWVLC Trigger: ACATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR TCA 90 bp | CAGAAGGAAATGTCAAAGTTCCTGAATGCAACCTGCAACTGGAAGTaGAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QKEMSKFLNATCNWK*NQSPNIIRYGRNQE Trigger: CTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTGCATTCAGGAACTTTGACATTTCCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR GCA 90 bp | GGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTaGCTTGAGGGCGAGGTATCTTATTTATCTACAGCATGTAGAACA | + |
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Preference number: 1 (lower is better) Translates to: GTSCHAGGIFRLIKK*LEGEVSYLSTACRT Trigger: TGTTCTACATGCTGTAGATAAATAAGATACCTCGCCCTCAAGGCACTTTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR CCA 90 bp | GGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTCATATACTTTaGCCTCTGAATGTTAAGTCATTACCAGCTGCAAACCACATCTGG | + |
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Preference number: 1 (lower is better) Translates to: GFMSSKALKLLFHIL*PLNVKSLPAANHIW Trigger: CCAGATGTGGTTTGCAGCTGGTAATGACTTAACATTCAGAGGCCAAAGTATATGAAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR CCA 90 bp | GACATTTGCATTTTCAATAAATCTATCCTAGACAGTAAAGCATTATaGAATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: DICIFNKSILDSKAL*NADGTSCHAGGIFR Trigger: CCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCATTCCATAATGCTTTACTGTCTAGGATAGATTTATTGAAAATGCAAATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR CCA 90 bp | AAACACAGCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATGTCTTCCTCCAGCTGCTaGGACTCCTCCTTCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: KHSFVRVPVLATVFAGCMSSSSC*DSSFTA Trigger: GGCTGTGAAGGAGGAGTCCCAGCAGCTGGAGGAAGA...CATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR-3UTR GCA 90 bp | AAACACAGCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATGGTCAAAGTTCCTGAATaGAACCTGCAACTGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KHSFVRVPVLATVFAGCMVKVPE*NLQLEV Trigger: CACTTCCAGTTGCAGGTTGCATTCAGGAACTTTGAC...CATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR-3UTR CCA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGCCTGGGACGGGCTCCTaGATGGGAAGGACTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LLSRHMLCQERLSGQPWVPGTGS*MGRTCC Trigger: ACAGCAAGTCCTTCCCATCCAGGAGCCCGTCCCAGG...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR CAA 90 bp | GGGGTGTTGGCTGTGCTGTGGTCTGAGGTAGAGAACCCCGAGTGTTaGCTGGGCTCACTTTGCTTACTCTTCACTTTGGTACCATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: GVLAVLWSEVENPEC*LGSLCLLFTLVPCK Trigger: CTTACATGGTACCAAAGTGAAGAGTAAGCAAAGTGAGCCCAGCAAACACTCGGGGTTCTCTACCTCAGACCACAGCACAGCCAACACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGTCTTCGCTGGGTGCATaGTCACCACCACTGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: GLLSRHMLCQERLSGQPWSSLGA*SPPLGD Trigger: ATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGA...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR-3UTR CCA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGGTGTTGGCTGTGCTGTaGTCTGAGGTAGAGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: LLSRHMLCQERLSGQPWVVLAVL*SEVENP Trigger: GGGGTTCTCTACCTCAGACCACAGCACAGCCAACAC...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR-3UTR TCA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGCTGGACAACCTTGGGTaGAGATACTCTCTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLSRHMLCQERLSGQPWVLDNLG*RYSLSL Trigger: CAAGGAGAGAGAGTATCTTCACCCAAGGTTGTCCAG...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGCAGCATGTAGAACAGTaGCTGGGCCACACTAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: GRWISEFKESLVYRVSSRQHVEQ*LGHTKV Trigger: TACTTTAGTGTGGCCCAGGCACTGTTCTACATGCTG...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTGGACAACCTTGGGTaGAGATACTCTCTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SQHYQVWEKPGGLLSRHMLDNLG*RYSLSL Trigger: CAAGGAGAGAGAGTATCTTCACCCAAGGTTGTCCAG...CATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGTGTCCAGCAAAGCCTTaGAGCTCTTATTTCATATAC | + |
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Preference number: 2 (lower is better) Translates to: GGRGRWISEFKESLVYRVCPAKP*SSYFIY Trigger: GTATATGAAATAAGAGCTTCAAGGCTTTGCTGGACA...CACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR CAA 90 bp | CAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTGCCTaGAGGGCGAGGTATCTTATTTATCTACAGCATGTAGAACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: QAVMLGVSSGLLKSA*RARYLIYLQHVEQC Trigger: GCACTGTTCTACATGCTGTAGATAAATAAGATACCTCGCCCTCAAGGCACTTTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGTTTCATAGTCTAGCATaGGCCTCAGGAATGATGATC | + |
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Preference number: 2 (lower is better) Translates to: LEVKSKSQHYQVWEKPGGFHSLA*ASGMMI Trigger: GATCATCATTCCTGAGGCTCATGCTAGACTATGAAA...CCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTGAATGCAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGAGCAGACACATGCTATaGCAGGAAAGACTGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VPECNLQLEVKSKSQHYQSRHML*QERLSG Trigger: TCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCT...CTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTGCATTCAGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR-3UTR GCA 90 bp | GGAATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAATCCCATGTAAAGCAATaGAGAGAGAAACAGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: GMQMEQAVMLGVSSGLLKSHVKQ*REKQHC Trigger: GCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGA...TTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGATATACTTTGGCCTCTaGATGTTAAGTCATTACCAG | + |
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Preference number: 2 (lower is better) Translates to: LPEMPKSDSHASSLVGFMIYFGL*MLSHYQ Trigger: CTGGTAATGACTTAACATTCAGAGGCCAAAGTATAT...CATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTATTGAATCGTATGCTGTaGTTTCAACACAGGCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: VKSKSQHYQVWEKPGGLLLNRML*FQHRLA Trigger: GGCTAGCCTGTGTTGAAACCACAGCATACGATTCAA...TAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR-3UTR CCA 90 bp | TCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGGCTTACTCTTCACTTTaGTACCATGTAAGTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: SQHYQVWEKPGGLLSRHMAYSSL*YHVSGL Trigger: AAGTCCACTTACATGGTACCAAAGTGAAGAGTAAGC...CATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR-3UTR TCA 90 bp | GGAATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAGCATGCAGGCATTTCTaGTACAGGATTAATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: GMQMEQAVMLGVSSGLLKACRHF*YRINIL Trigger: CAGAATATTAATCCTGTATCAGAAATGCCTGCATGC...TTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGACAGCTGTAATTTTATaGTTCTGGATAGAACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LEVKSKSQHYQVWEKPGGTAVIL*FWIELA Trigger: GGCAAGTTCTATCCAGAACCATAAAATTACAGCTGT...CCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR-3UTR CCA 90 bp | TTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAACAGCTGTAATTTTATaGTTCTGGATAGAACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSGMGETRRAFKQTHAMPTAVIL*FWIELA Trigger: GGCAAGTTCTATCCAGAACCATAAAATTACAGCTGT...TGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR-3UTR GCA 90 bp | GGAATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAACTCCATTTCCTTTCTTaGATTTCCAACAATTACGCT | + |
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Preference number: 2 (lower is better) Translates to: GMQMEQAVMLGVSSGLLKLHFLS*ISNNYA Trigger: AGCGTAATTGTTGGAAATGCAAGAAAGGAAATGGAG...TTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCAGGCATTTCTGATACAGGATTAATATTCTGCTGTGCTGTCAGAAATGATAGAGAGAAACAGCACTaGCAGAAATGCCAAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: HAGISDTGLIFCCAVRNDREKQH*QKCQNQ Trigger: CTGATTTTGGCATTTCTGGCAGTGCTGTTTCTCTCT...ATCATTTCTGACAGCACAGCAGAATATTAATCCTGTATCAGAAATGCCTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR-3UTR GCA 90 bp | GGAATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAACAGGATTAATATTCTaGTGTGCTGTCAGAAATGAT | + |
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Preference number: 2 (lower is better) Translates to: GMQMEQAVMLGVSSGLLKTGLIF*CAVRND Trigger: ATCATTTCTGACAGCACAGCAGAATATTAATCCTGT...TTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
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| 3UTR CCA 72 bp | CTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTaGGTGCATGCTCACCACCACTGGGAGATCGACAGC | + |
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Preference number: 3 (lower is better) Translates to: LRPSPGPCHCLR*VHAHHHWEIDS Trigger: GCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR GCA 72 bp | GTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTaGATGCTCACCACCACTGGGAGATCGACAGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: VRVPVLATVFAG*MLTTTGRSTAQ Trigger: TTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR GCA 72 bp | GAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATaGTCACCACCACTGGGAGATCGACAGCTCAAATCC | + |
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Preference number: 3 (lower is better) Translates to: ESRSLPLSSLGA*SPPLGDRQLKS Trigger: GGATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR CCA 72 bp | TGCCACTGTCTTCGCTGGGTGCATGCTCACCACCACTaGGAGATCGACAGCTCAAATCCTCCACCCCAGACT | + |
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Preference number: 3 (lower is better) Translates to: CHCLRWVHAHHH*EIDSSNPPPQT Trigger: AGTCTGGGGTGGAGGATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR TCA 72 bp | ACTGTAATCCTGAGGGGTGTTGGCTGTGCTGTGGTCTaGGGTAGAGAACCCCGAGTGTTTGCTGGGCTCACT | + |
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Preference number: 3 (lower is better) Translates to: TVILRGVGCAVV*GREPRVFAGLT Trigger: AGTGAGCCCAGCAAACACTCGGGGTTCTCTACCTCAGACCACAGCACAGCCAACACCCCTCAGGATTACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR CCA 72 bp | TCTTGGGTTAGAATCAGAGCAGAATCTTCATCACCCTaGGACGGGCTCCTGGATGGGAAGGACTTGCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: SWVRIRAESSSP*DGLLDGKDLLF Trigger: GAACAGCAAGTCCTTCCCATCCAGGAGCCCGTCCCAGGGTGATGAAGATTCTGCTCTGATTCTAACCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR TCA 72 bp | CTTTTACTTTGGAACTCCAAAGGGGAACTTAGGCAGTaGGAAACACAGCTTCGTCCGAGTCCCGGTCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: LLLWNSKGELRQ*ETQLRPSPGPC Trigger: GCAAGGACCGGGACTCGGACGAAGCTGTGTTTCTCACTGCCTAAGTTCCCCTTTGGAGTTCCAAAGTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
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| 3UTR GCA 72 bp | GAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATaGCAGGAAAGACTGTCTGGACAACCTTGGGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EKPGGLLSRHML*QERLSGQPWVK Trigger: CTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| 3UTR-3UTR CAA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGCCACAATCCCAAGTCTaGTCTTCAGTATCACAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSRHMLCQERLSGQPWVPQSQV*SSVSQP Trigger: GGGCTGTGATACTGAAGACAAGACTTGGGATTGTGG...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGGAGAACCCCGAGTGTTaGCTGGGCTCACTTTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SQHYQVWEKPGGLLSRHMENPEC*LGSLCL Trigger: TAAGCAAAGTGAGCCCAGCAAACACTCGGGGTTCTC...CATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| 3UTR GCA 72 bp | GAGGTAGAGAACCCCGAGTGTTTGCTGGGCTCACTTTaGTTACTCTTCACTTTGGTACCATGTAAGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: EVENPECLLGSL*LLFTLVPCKWT Trigger: AGTCCACTTACATGGTACCAAAGTGAAGAGTAAGCAAAGTGAGCCCAGCAAACACTCGGGGTTCTCTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| 3UTR GCA 72 bp | GTAAAGCAATGCAGAGAGAAACAGCACTGCCAGAAATaGCAAAATCAGATAGCCACGCATCTTCCCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VKQCREKQHCQK*QNQIATHLPWW Trigger: CCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGTTTGCTGGGCTCACTTaGCTTACTCTTCACTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SQHYQVWEKPGGLLSRHMFAGLT*LTLHFG Trigger: ACCAAAGTGAAGAGTAAGCAAAGTGAGCCCAGCAAA...CATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| 3UTR GCA 72 bp | ATGTCCCATGTAAAGCAATGCAGAGAGAAACAGCACTaGCAGAAATGCCAAAATCAGATAGCCACGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: MSHVKQCREKQH*QKCQNQIATHL Trigger: AAGATGCGTGGCTATCTGATTTTGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| 3UTR TCA 72 bp | ACACAGTGTGTGAGACTGTTGAATACAAGCCTGAAGTaGCTCAAATGGAGACCATGCTTTAGGCATTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TQCVRLLNTSLK*LKWRPCFRHLV Trigger: CACTAAATGCCTAAAGCATGGTCTCCATTTGAGTCACTTCAGGCTTGTATTCAACAGTCTCACACACTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| 3UTR GCA 72 bp | TGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTaGCTTGAGGGCGAGGTATCTTATTTATCTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CHAGGIFRLIKK*LEGEVSYLSTA Trigger: TGCTGTAGATAAATAAGATACCTCGCCCTCAAGGCACTTTTTAATAAGCCTGAAGATACCCCCAGCATGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTCGGGGTCTGAGCTTTTTAAATTGTCTTGGGTTAGAATCAGAGCAGAATTGCTTACTCTTCACTTaGGTACCATGTAAGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RGRGLSFLNCLGLESEQNCLLFT*VPCKWT Trigger: AGTCCACTTACATGGTACCAAAGTGAAGAGTAAGCA...ATTCTGCTCTGATTCTAACCCAAGACAATTTAAAAAGCTCAGACCCCGACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| 3UTR GCA 72 bp | AGGCATGCAGGCATTTCTGATACAGGATTAATATTCTaGTGTGCTGTCAGAAATGATACTGAGGGAACTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RHAGISDTGLIF*CAVRNDTEGTS Trigger: ACTAGTTCCCTCAGTATCATTTCTGACAGCACAGCAGAATATTAATCCTGTATCAGAAATGCCTGCATGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGTTTTGTACAAGGCATGCAGGCATTTCTGATACAGGATTAATATTCTGCCCTCCATTTCCTTTCTaGCATTTCCAACAATTACGC | + |
|
Preference number: 3 (lower is better) Translates to: VLFCTRHAGISDTGLIFCPPFPF*HFQQLR Trigger: GCGTAATTGTTGGAAATGCAAGAAAGGAAATGGAGG...GCAGAATATTAATCCTGTATCAGAAATGCCTGCATGCCTTGTACAAAACAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCACACTTTCCCCTTAATTaGAAAGTGTTTCTGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPHFPLN*KVFLCL Trigger: AAGACACAGAAACACTTTCAAATTAAGGGGAAAGTG...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| 3UTR-3UTR CAA 90 bp | CAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAACACTTTCCCCTTAATTaGAAAGTGTTTCTGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QPATGSEIKVPTLSGMGEHFPLN*KVFLCL Trigger: AAGACACAGAAACACTTTCAAATTAAGGGGAAAGTG...TTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| 3UTR GCA 72 bp | TGTCAATTTCTAAAGGGAATGTCCCATGTAAAGCAATaGAGAGAGAAACAGCACTGCCAGAAATGCCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CQFLKGMSHVKQ*REKQHCQKCQN Trigger: ATTTTGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACATTCCCTTTAGAAATTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| 3UTR CCA 72 bp | ATTTTCAATAAATCTATCCTAGACAGTAAAGCATTATaGAATGCAGATGGAACAAGCTGTCATGCTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IFNKSILDSKAL*NADGTSCHAGG Trigger: ACCCCCAGCATGACAGCTTGTTCCATCTGCATTCCATAATGCTTTACTGTCTAGGATAGATTTATTGAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | CCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATGCTCACCACCACTGGGTGCCTCAGCCAGCCTaGGTTCTCCAGTCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPGPCHCLRWVHAHHHWVPQPA*VLQSPQ Trigger: CTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCAC...CCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| 3UTR CAA 72 bp | GCAGTGAGAAACACAGCTTCGTCCGAGTCCCGGTCCTaGCCACTGTCTTCGCTGGGTGCATGCTCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AVRNTASSESRS*PLSSLGACSPP Trigger: TGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTTCTCACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | GTCAGCTCTAAACAGAGGATTGAGGTAGTCAGCTCGATTCTTCCACAGGTTGGACCAGGCACCGAGCGCTaGAGCCGGAAAGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSKQRIEVVSSILPQVGPGTER*SRKGAG Trigger: GCCAGCCCCTTTCCGGCTTCAGCGCTCGGTGCCTGG...TCCAACCTGTGGAAGAATCGAGCTGACTACCTCAATCCTCTGTTTAGAGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | GGGAATGTCCCATGTAAAGCAATGCAGAGAGAAACAGCACTGCCAGAAATGCCACCAGGCACCGAGCGCTaGAGCCGGAAAGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNVPCKAMQRETALPEMPPGTER*SRKGAG Trigger: GCCAGCCCCTTTCCGGCTTCAGCGCTCGGTGCCTGG...TGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | AAACACAGCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATGGAGATGTACACGTCGTaGCAGTCTCTCTCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHSFVRVPVLATVFAGCMEMYTS*QSLSCG Trigger: TCCACAGGAGAGAGACTGCCACGACGTGTACATCTC...CATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGGCTCCCCTGGGTCTaGCTGTGGTCAGCTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRWISEFKESLVYRVRLPWV*LWSALN Trigger: GTTTAGAGCTGACCACAGTCAGACCCAGGGGAGCCT...CACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGCCGAGTCCCGGTCCTTaGCACTGTCTTCGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLSRHMLCQERLSGQPWPSPGP*HCLRWV Trigger: CACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGG...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | TCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGGCCACCGAGCACACCTaGGCCGTTCTGTCCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQHYQVWEKPGGLLSRHMATEHT*AVLSQP Trigger: CGGCTGGGACAGAACGGCCCAGGTGTGCTCGGTGGC...CATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CACGCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTGCCACCGAGCACACCTaGGCCGTTCTGTCCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HASSLVGFMSSKALKLLFATEHT*AVLSQP Trigger: CGGCTGGGACAGAACGGCCCAGGTGTGCTCGGTGGC...AAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | GTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTACCAGGCACCGAGCGCTaGAGCCGGAAAGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSKSQHYQVWEKPGGLLPGTER*SRKGAG Trigger: GCCAGCCCCTTTCCGGCTTCAGCGCTCGGTGCCTGG...TAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GGGAATGTCCCATGTAAAGCAATGCAGAGAGAAACAGCACTGCCAGAAATGCCAGTGCCTCAGCCAGCCTaGGTTCTCCAGTCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GNVPCKAMQRETALPEMPVPQPA*VLQSPQ Trigger: CTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCAC...TGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGCAGCCGTCAGAACAGTaGACAAGCACACTTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRWISEFKESLVYRVQPSEQ*TSTLAP Trigger: AGGGGCAAGTGTGCTTGTTCACTGTTCTGACGGCTG...CACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCCTCCTTCACAGCCATGAGGTAATCTGTAACAGACTGTCGAGGCTGCAACAGGAAATCGCCGTCTaGTCCGGAACTTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLLHSHEVICNRLSRLQQEIAV*SGTWSC Trigger: GCAGCTCCAAGTTCCGGAGCAGACGGCGATTTCCTG...TTGCAGCCTCGACAGTCTGTTACAGATTACCTCATGGCTGTGAAGGAGGAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR GCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGCGGAAAGGGGCTGGCTaGTCCTGCAGATGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRWISEFKESLVYRVSSRRKGAG*SCRWRH Trigger: ATGCCTCCATCTGCAGGAGCAGCCAGCCCCTTTCCG...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGGTGCCGTGGCCGATCTaGGGACGTACAGTTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPEMPKSDSHASSLVGFMVPWPI*GRTVPW Trigger: CCACGGAACTGTACGTCCCCAGATCGGCCACGGCAC...CATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | CACGCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTTGGAGCTGCCCACGATaGTGTGTGCCGTGGCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: HASSLVGFMSSKALKLLFWSCPR*CVPWPI Trigger: GATCGGCCACGGCACACATCATCGTGGGCAGCTCCA...AAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGCGGAAAGGGGCTGGCTaGTCCTGCAGATGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSRHMLCQERLSGQPWVRKGAG*SCRWRH Trigger: ATGCCTCCATCTGCAGGAGCAGCCAGCCCCTTTCCG...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGAAGCGGAAAGGGGCTGGCTaGTCCTGCAGATGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRHMLCQERLSGQPWVKRKGAG*SCRWRH Trigger: ATGCCTCCATCTGCAGGAGCAGCCAGCCCCTTTCCG...CTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | GGACTCCTCCTTCACAGCCATGAGGTAATCTGTAACAGACTGTCGAGGCTGCAAATGGCTTGGAGCATCTaGTCATCCTCCAGGCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLLLHSHEVICNRLSRLQMAWSI*SSSRHR Trigger: TCGGTGCCTGGAGGATGAGCAGATGCTCCAAGCCAT...TTGCAGCCTCGACAGTCTGTTACAGATTACCTCATGGCTGTGAAGGAGGAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR GCA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGACTGTCTTCGCTGGGTaGATGCTCACCACCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLSRHMLCQERLSGQPWTVFAG*MLTTTG Trigger: CCCAGTGGTGGTGAGCATGCACCCAGCGAAGACAGT...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | AAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACATGGAGCTGCCCACGATaGTGTGTGCCGTGGCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KVPTLSGMGETRRAFKQTWSCPR*CVPWPI Trigger: GATCGGCCACGGCACACATCATCGTGGGCAGCTCCA...TGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | TTGGCTGTGCTGTGGTCTGAGGTAGAGAACCCCGAGTGTTTGCTGGGCTCACTTACTTGCCCCTTCCTCTaGAACTGCCTTTGCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVLWSEVENPECLLGSLTCPFL*NCLCNE Trigger: TTCATTGCAAAGGCAGTTTCAGAGGAAGGGGCAAGT...AAGTGAGCCCAGCAAACACTCGGGGTTCTCTACCTCAGACCACAGCACAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | AAACACAGCTTCGTCCGAGTCCCGGTCCTTGCCACTGTCTTCGCTGGGTGCATGTTTTTCCATTCTCATTaGGTTCTCGCCTCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KHSFVRVPVLATVFAGCMFFHSH*VLASPS Trigger: AGAAGGAGAGGCGAGAACTCAATGAGAATGGAAAAA...CATGCACCCAGCGAAGACAGTGGCAAGGACCGGGACTCGGACGAAGCTGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR GCA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGACCAGCAACCAGCCCTaGTCCCGTTCTTCCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSRHMLCQERLSGQPWTSNQP*SRSSLS Trigger: GGATAAGGAAGAACGGGAGCAGGGCTGGTTGCTGGT...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAATCTTCGCTGGGTGCATaGTCACCACCACTGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLLSRHMLCQERLSGQSSLGA*SPPLGD Trigger: ATCTCCCAGTGGTGGTGAGCATGCACCCAGCGAAGA...TTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | AAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACAGTGCCGTGGCCGATCTaGGGACGTACAGTTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVPTLSGMGETRRAFKQTVPWPI*GRTVPW Trigger: CCACGGAACTGTACGTCCCCAGATCGGCCACGGCAC...TGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGGGCTGCTCCTGCAGATaGAGGCATGGCTGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GRWISEFKESLVYRVSSRGCSCR*RHGCLY Trigger: GTAAAGACAGCCATGCCTCCATCTGCAGGAGCAGCC...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGTCCAAAGCCGGAAAGGGGCTaGCTGCTCCTGCAGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKCQNQIATHLPWWVLCPKPERG*LLLQME Trigger: CTCCATCTGCAGGAGCAGCCAGCCCCTTTCCGGCTT...TGGACATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAAGTGTTGGCTGTGCTGTaGTCTGAGGTAGAGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLLSRHMLCQERLSGQVLAVL*SEVENP Trigger: GGGGTTCTCTACCTCAGACCACAGCACAGCCAACAC...TTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGACTTGCCCCTTCCTCTaGAACTGCCTTTGCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRWISEFKESLVYRVTCPFL*NCLCNE Trigger: TTCATTGCAAAGGCAGTTTCAGAGGAAGGGGCAAGT...CACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGAAGATGGCTTGGAGCATCTaGTCATCCTCCAGGCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRHMLCQERLSGQPWVKMAWSI*SSSRHR Trigger: TCGGTGCCTGGAGGATGAGCAGATGCTCCAAGCCAT...CTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGATGGCTTGGAGCATCTaGTCATCCTCCAGGCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPEMPKSDSHASSLVGFMMAWSI*SSSRHR Trigger: TCGGTGCCTGGAGGATGAGCAGATGCTCCAAGCCAT...CATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGCTCATAGCCTTTCCCTaGAGCACGATTTGCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRWISEFKESLVYRVSSRLIAFP*STICHR Trigger: GCGATGGCAAATCGTGCTGCAGGGAAAGGCTATGAG...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGCTCCCCTGGGTCTGACTGTGGTCAGCTCTAAACAGAGGATTGAGGTAGGACGTACAGTTCCGTaGGGTAAGAGTCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: MKAPLGLTVVSSKQRIEVGRTVP*GKSHKL Trigger: GAGTTTGTGACTCTTACCCCACGGAACTGTACGTCC...TACCTCAATCCTCTGTTTAGAGCTGACCACAGTCAGACCCAGGGGAGCCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR CCA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGTGCCGTGGCCGATCTaGGGACGTACAGTTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPVPWPI*GRTVPW Trigger: CCACGGAACTGTACGTCCCCAGATCGGCCACGGCAC...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGCTGCTCCTGCAGATaGAGGCATGGCTGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RAFKQTHAMPGKTVWTTLGCSCR*RHGCLY Trigger: GTAAAGACAGCCATGCCTCCATCTGCAGGAGCAGCC...CAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGCTTTCCTGATGGCTTaGAGCATCTGCTCATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSRHMLCQERLSGQPWAFLMA*SICSSS Trigger: GGAGGATGAGCAGATGCTCCAAGCCATCAGGAAAGC...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGGCTTTCCTGATGGCTTaGAGCATCTGCTCATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRWISEFKESLVYRVSSRAFLMA*SICSSS Trigger: GGAGGATGAGCAGATGCTCCAAGCCATCAGGAAAGC...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTGCCACCGAGCACACCTaGGCCGTTCTGTCCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LDRTCHFSTFLLRIALSPATEHT*AVLSQP Trigger: CGGCTGGGACAGAACGGCCCAGGTGTGCTCGGTGGC...AGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| 3UTR CAA 72 bp | GCTGTGCTGTGGTCTGAGGTAGAGAACCCCGAGTGTTaGCTGGGCTCACTTTGCTTACTCTTCACTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AVLWSEVENPEC*LGSLCLLFTLV Trigger: TACCAAAGTGAAGAGTAAGCAAAGTGAGCCCAGCAAACACTCGGGGTTCTCTACCTCAGACCACAGCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGCTCCCCTGGGTCTGACTGTGGTCAGCTCTAAACAGAGGATTGAGGTATCCACGAATATGACGTaGGTGGCCGTCAGATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: MKAPLGLTVVSSKQRIEVSTNMT*VAVRYK Trigger: TTTGTATCTGACGGCCACTCACGTCATATTCGTGGA...TACCTCAATCCTCTGTTTAGAGCTGACCACAGTCAGACCCAGGGGAGCCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR GCA 90 bp | GGAATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAACAGGAAATCGCCGTCTaGTCCGGAACTTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GMQMEQAVMLGVSSGLLKQEIAV*SGTWSC Trigger: GCAGCTCCAAGTTCCGGAGCAGACGGCGATTTCCTG...TTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGCTCTAAACAGAGGATTGAGGTAGTCAGCTCGATTCTTCCACAGGTTGGACTCATAGCCTTTCCCTaGAGCACGATTTGCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSKQRIEVVSSILPQVGLIAFP*STICHR Trigger: GCGATGGCAAATCGTGCTGCAGGGAAAGGCTATGAG...TCCAACCTGTGGAAGAATCGAGCTGACTACCTCAATCCTCTGTTTAGAGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR GCA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGCTCATAGCCTTTCCCTaGAGCACGATTTGCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSRHMLCQERLSGQPWVLIAFP*STICHR Trigger: GCGATGGCAAATCGTGCTGCAGGGAAAGGCTATGAG...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CACGCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTGCACGTTTTCAACCTTaGGCGTGCGGATGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HASSLVGFMSSKALKLLFARFQP*ACGCAP Trigger: TGGAGCACATCCGCACGCCCAAGGTTGAAAACGTGC...AAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | GGGAATGTCCCATGTAAAGCAATGCAGAGAGAAACAGCACTGCCAGAAATGCCAGAGATGTACACGTCGTaGCAGTCTCTCTCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNVPCKAMQRETALPEMPEMYTS*QSLSCG Trigger: TCCACAGGAGAGAGACTGCCACGACGTGTACATCTC...TGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACATTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAAGCCGGAAAGGGGCTaGCTGCTCCTGCAGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSKSQHYQVWEKPGGLLKPERG*LLLQME Trigger: CTCCATCTGCAGGAGCAGCCAGCCCCTTTCCGGCTT...TAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTCTTCCTCCAGCTGCTaGGACTCCTCCTTCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVKSKSQHYQVWEKPGGLSSSSC*DSSFTA Trigger: GGCTGTGAAGGAGGAGTCCCAGCAGCTGGAGGAAGA...AAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTGCCACTGTCTTCGCTaGGTGCATGCTCACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EVKSKSQHYQVWEKPGGLCHCLR*VHAHHH Trigger: GTGGTGGTGAGCATGCACCCAGCGAAGACAGTGGCA...AAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAATCAATGGTGGAGATCTaGCTGTGCAGAATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLLSRHMLCQERLSGQSMVEI*LCRIQV Trigger: AACCTGGATTCTGCACAGTCAGATCTCCACCATTGA...TTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | CTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTGGAGCTGCCCACGATaGTGTGTGCCGTGGCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: LDRTCHFSTFLLRIALSPWSCPR*CVPWPI Trigger: GATCGGCCACGGCACACATCATCGTGGGCAGCTCCA...AGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GGACCACAAAGAGTAGGTTCTTTCTTGAATCGTATGCTGTGGTTTCAACACAGGCAGCCGTCAGAACAGTaGACAAGCACACTTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPQRVGSFLNRMLWFQHRQPSEQ*TSTLAP Trigger: AGGGGCAAGTGTGCTTGTTCACTGTTCTGACGGCTG...CCTGTGTTGAAACCACAGCATACGATTCAAGAAAGAACCTACTCTTTGTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | GCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGCAGCCGTCAGAACAGTaGACAAGCACACTTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATGSEIKVPTLSGMGETRQPSEQ*TSTLAP Trigger: AGGGGCAAGTGTGCTTGTTCACTGTTCTGACGGCTG...CCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | GGAATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAACCAGCAACCAGCCCTaGTCCCGTTCTTCCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GMQMEQAVMLGVSSGLLKTSNQP*SRSSLS Trigger: GGATAAGGAAGAACGGGAGCAGGGCTGGTTGCTGGT...TTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCACAGGAAATCGCCGTCTaGTCCGGAACTTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPQEIAV*SGTWSC Trigger: GCAGCTCCAAGTTCCGGAGCAGACGGCGATTTCCTG...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| CDS-3UTR CCA 90 bp | AAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACAGCACGTTTTCAACCTTaGGCGTGCGGATGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVPTLSGMGETRRAFKQTARFQP*ACGCAP Trigger: TGGAGCACATCCGCACGCCCAAGGTTGAAAACGTGC...TGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
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| CDS-3UTR CCA 90 bp | AGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGACGTACAGTTCCGTaGGGTAAGAGTCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RAFKQTHAMPGKTVWTTLGRTVP*GKSHKL Trigger: GAGTTTGTGACTCTTACCCCACGGAACTGTACGTCC...CAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGAATGCAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGAATCTTCATCACCCTaGGACGGGCTCCTGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPECNLQLEVKSKSQHYQESSSP*DGLLDG Trigger: CCCATCCAGGAGCCCGTCCCAGGGTGATGAAGATTC...CTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTGCATTCAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGAAGCATTTTCCACGAATATaGCGTGAGTGGCCGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRHMLCQERLSGQPWVKHFPRI*REWPSD Trigger: ATCTGACGGCCACTCACGTCATATTCGTGGAAAATG...CTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGAAGTCAATGGTGGAGATCTaGCTGTGCAGAATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRHMLCQERLSGQPWVKSMVEI*LCRIQV Trigger: AACCTGGATTCTGCACAGTCAGATCTCCACCATTGA...CTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GGGAATGTCCCATGTAAAGCAATGCAGAGAGAAACAGCACTGCCAGAAATGCCATCAATGGTGGAGATCTaGCTGTGCAGAATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GNVPCKAMQRETALPEMPSMVEI*LCRIQV Trigger: AACCTGGATTCTGCACAGTCAGATCTCCACCATTGA...TGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGTATCCAGCTTGGGGTTaGAGGAAAAGCAGTATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLSRHMLCQERLSGQPWYPAWG*RKSSIA Trigger: AGCTATACTGCTTTTCCTTCAACCCCAAGCTGGATA...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | TTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAGCCAGACACACTCAATaGACTGGTCGATTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGMGETRRAFKQTHAMPARHTQ*TGRLLE Trigger: CTCCAGTAATCGACCAGTTCATTGAGTGTGTCTGGC...TGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | CAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGTCCAGCCAGACACACTCAATaGACTGGTCGATTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKCQNQIATHLPWWVLCPARHTQ*TGRLLE Trigger: CTCCAGTAATCGACCAGTTCATTGAGTGTGTCTGGC...TGGACATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCCTCCTTCACAGCCATGAGGTAATCTGTAACAGACTGTCGAGGCTGCAATGCAATGAAGATCCCTaGATCCATGATGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLLLHSHEVICNRLSRLQCNEDP*IHDGFD Trigger: ATCAAAGCCATCATGGATGCAGGGATCTTCATTGCA...TTGCAGCCTCGACAGTCTGTTACAGATTACCTCATGGCTGTGAAGGAGGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR GCA 90 bp | TCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGAGAACCCCGAGTGTTTaGTGGGCTCACTTTGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQHYQVWEKPGGLLSRHMRTPSV*WAHFAY Trigger: GTAAGCAAAGTGAGCCCAGCAAACACTCGGGGTTCT...CATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGTGGATGGGAAGGACTTaGTGTTCCCACTGTAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAFKQTHAMPGKTVWTTLWMGRT*CSHCNP Trigger: AGGATTACAGTGGGAACAGCAAGTCCTTCCCATCCA...CAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGTCGCCTGCTTTTCAATaGTGGAGATCTGACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAFKQTHAMPGKTVWTTLSPAFQ*WRSDCA Trigger: TGCACAGTCAGATCTCCACCATTGAAAAGCAGGCGA...CAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGGAGATGTACACGTCGTaGCAGTCTCTCTCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ATGSEIKVPTLSGMGETREMYTS*QSLSCG Trigger: TCCACAGGAGAGAGACTGCCACGACGTGTACATCTC...CCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGTCCAGGACGTACAGTTCCGTaGGGTAAGAGTCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QKCQNQIATHLPWWVLCPGRTVP*GKSHKL Trigger: GAGTTTGTGACTCTTACCCCACGGAACTGTACGTCC...TGGACATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTCGGGGTCTGAGCTTTTTAAATTGTCTTGGGTTAGAATCAGAGCAGAATGGCTGCTCCTGCAGATaGAGGCATGGCTGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGRGLSFLNCLGLESEQNGCSCR*RHGCLY Trigger: GTAAAGACAGCCATGCCTCCATCTGCAGGAGCAGCC...ATTCTGCTCTGATTCTAACCCAAGACAATTTAAAAAGCTCAGACCCCGACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | TTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATGCCACATTTTCCACGAATATaGCGTGAGTGGCCGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSGMGETRRAFKQTHAMPHFPRI*REWPSD Trigger: ATCTGACGGCCACTCACGTCATATTCGTGGAAAATG...TGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGCTCTATTCACATCGCTaGGCTGCCAATAATTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLSRHMLCQERLSGQPWLYSHR*AANNYQ Trigger: CTGATAATTATTGGCAGCTCAGCGATGTGAATAGAG...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGGTGCCTCAGCCAGCCTaGGTTCTCCAGTCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ELAISQHFYYELHFPLNLVPQPA*VLQSPQ Trigger: CTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCAC...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGTTCTTTCTTGAATCTTaGGTTCTCGCCTCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRWISEFKESLVYRVSSRFFLES*VLASPS Trigger: AGAAGGAGAGGCGAGAACTCAAGATTCAAGAAAGAA...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACATCCACCCCAGACTCTTaGTCACTATTCACTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVPTLSGMGETRRAFKQTSTPDS*SLFTER Trigger: CCTCTCAGTGAATAGTGATCAAGAGTCTGGGGTGGA...TGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GGGAATGTCCCATGTAAAGCAATGCAGAGAGAAACAGCACTGCCAGAAATGCCACCTGCTTTTCAATGGTaGAGATCTGACTGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GNVPCKAMQRETALPEMPPAFQW*RSDCAE Trigger: TTCTGCACAGTCAGATCTCCACCATTGAAAAGCAGG...TGGCATTTCTGGCAGTGCTGTTTCTCTCTGCATTGCTTTACATGGGACATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCAAGCCGGAAAGGGGCTaGCTGCTCCTGCAGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FWIELAISQHFYYELHFPKPERG*LLLQME Trigger: CTCCATCTGCAGGAGCAGCCAGCCCCTTTCCGGCTT...GGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAGCTTTCCTGATGGCTTaGAGCATCTGCTCATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPATGSEIKVPTLSGMGEAFLMA*SICSSS Trigger: GGAGGATGAGCAGATGCTCCAAGCCATCAGGAAAGC...TTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAAGAACTGGTCGATTACTaGAGAGATTTCTTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLLSRHMLCQERLSGQELVDY*RDFFWV Trigger: GACCCAAAAGAAATCTCTCCAGTAATCGACCAGTTC...TTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGGAACTGGTCGATTACTaGAGAGATTTCTTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRWISEFKESLVYRVSSRELVDY*RDFFWV Trigger: GACCCAAAAGAAATCTCTCCAGTAATCGACCAGTTC...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGATTCTTCCACAGGTTaGACCACAAAGAGTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAFKQTHAMPGKTVWTTLDSSTG*TTKSRF Trigger: GAACCTACTCTTTGTGGTCCAACCTGTGGAAGAATC...CAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| 3UTR CAA 72 bp | CTTCCACAGGTTGGACCACAAAGAGTAGGTTCTTTCTaGAATCGTATGCTGTGGTTTCAACACAGGCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPQVGPQRVGSF*NRMLWFQHRLA Trigger: GGCTAGCCTGTGTTGAAACCACAGCATACGATTCAAGAAAGAACCTACTCTTTGTGGTCCAACCTGTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR TCA 90 bp | CAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGTCCATATCCAGCTTGGGGTTaGAGGAAAAGCAGTATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKCQNQIATHLPWWVLCPYPAWG*RKSSIA Trigger: AGCTATACTGCTTTTCCTTCAACCCCAAGCTGGATA...TGGACATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | TTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAACTTCCAGCATTTTCTaGAGACTGTTCCTCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSGMGETRRAFKQTHAMPTSSIF*RLFLMT Trigger: CGTCATGAGGAACAGTCTTCAGAAAATGCTGGAAGT...TGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGAAGTTCTTTCTTGAATCTTaGGTTCTCGCCTCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRHMLCQERLSGQPWVKFFLES*VLASPS Trigger: AGAAGGAGAGGCGAGAACTCAAGATTCAAGAAAGAA...CTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | TTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATGCCACAAAGTTCCCAGCGCTaGCTTTTTACAAGACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGMGETRRAFKQTHAMPQSSQR*LFTRHS Trigger: AGAGTGTCTTGTAAAAAGGCAGCGCTGGGAACTTTG...TGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTGTAGCTGTTGTCGCCTaGTTTTCAATGGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: EVKSKSQHYQVWEKPGGLVAVVA*FSMVEI Trigger: GATCTCCACCATTGAAAAGCAGGCGACAACAGCTAC...AAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | CTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTACCAGCAACCAGCCCTaGTCCCGTTCTTCCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LDRTCHFSTFLLRIALSPTSNQP*SRSSLS Trigger: GGATAAGGAAGAACGGGAGCAGGGCTGGTTGCTGGT...AGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | CTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGAACTGTTCCGTTAGCTaGCAGACACACTCAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LEVKSKSQHYQVWEKPGGNCSVS*QTHSMN Trigger: GTTCATTGAGTGTGTCTGGCAGCTAACGGAACAGTT...CCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | CACGCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTAACTGTTCCGTTAGCTaGCAGACACACTCAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HASSLVGFMSSKALKLLFNCSVS*QTHSMN Trigger: GTTCATTGAGTGTGTCTGGCAGCTAACGGAACAGTT...AAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGACAAGTTGTACGATCTaGAAGTTCTTGCAGCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GRWISEFKESLVYRVSSRTSCTI*KFLQRI Trigger: TATTCGCTGCAAGAACTTCCAGATCGTACAACTTGT...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGGAACTGGTCGATTACTaGAGAGATTTCTTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSRHMLCQERLSGQPWVELVDY*RDFFWV Trigger: GACCCAAAAGAAATCTCTCCAGTAATCGACCAGTTC...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CACGCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTGATTCTTCCACAGGTTaGACCACAAAGAGTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HASSLVGFMSSKALKLLFDSSTG*TTKSRF Trigger: GAACCTACTCTTTGTGGTCCAACCTGTGGAAGAATC...AAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGCCTGGGACGGGCTCCTaGATGGGAAGGACTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELAISQHFYYELHFPLNLPGTGS*MGRTCC Trigger: ACAGCAAGTCCTTCCCATCCAGGAGCCCGTCCCAGG...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGAGGCTCCCCTGGGTCTaGCTGTGGTCAGCTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELAISQHFYYELHFPLNLRLPWV*LWSALN Trigger: GTTTAGAGCTGACCACAGTCAGACCCAGGGGAGCCT...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | GTTCCTGAATGCAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGCCCTGCAGCACGATTTaGCATCGCATTAAGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPECNLQLEVKSKSQHYQPCSTI*HRIKFR Trigger: CCTAAACTTAATGCGATGGCAAATCGTGCTGCAGGG...CTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTGCATTCAGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAATCGCCTGCTTTTCAATaGTGGAGATCTGACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPATGSEIKVPTLSGMGESPAFQ*WRSDCA Trigger: TGCACAGTCAGATCTCCACCATTGAAAAGCAGGCGA...TTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | GTGCTGTTTTGTACAAGGCATGCAGGCATTTCTGATACAGGATTAATATTCTGCTCCACGAATATGACGTaGGTGGCCGTCAGATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFCTRHAGISDTGLIFCSTNMT*VAVRYK Trigger: TTTGTATCTGACGGCCACTCACGTCATATTCGTGGA...GCAGAATATTAATCCTGTATCAGAAATGCCTGCATGCCTTGTACAAAACAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | GTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTATATCCAGCTTGGGGTTaGAGGAAAAGCAGTATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKSKSQHYQVWEKPGGLLYPAWG*RKSSIA Trigger: AGCTATACTGCTTTTCCTTCAACCCCAAGCTGGATA...TAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCACAAAGTTCCCAGCGCTaGCTTTTTACAAGACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPQSSQR*LFTRHS Trigger: AGAGTGTCTTGTAAAAAGGCAGCGCTGGGAACTTTG...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | ATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTCAAAGTTCCCAGCGCTaGCTTTTTACAAGACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MQMEQAVMLGVSSGLLKSQSSQR*LFTRHS Trigger: AGAGTGTCTTGTAAAAAGGCAGCGCTGGGAACTTTG...ACTTTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGTTTTGTACAAGGCATGCAGGCATTTCTGATACAGGATTAATATTCTGCCCCTGCAGCACGATTTaGCATCGCATTAAGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLFCTRHAGISDTGLIFCPCSTI*HRIKFR Trigger: CCTAAACTTAATGCGATGGCAAATCGTGCTGCAGGG...GCAGAATATTAATCCTGTATCAGAAATGCCTGCATGCCTTGTACAAAACAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTGCAATGAAGATCCCTaGATCCATGATGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EVKSKSQHYQVWEKPGGLCNEDP*IHDGFD Trigger: ATCAAAGCCATCATGGATGCAGGGATCTTCATTGCA...AAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | TTCTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCACAGACTGTCGAGGCTaGAACCCCTTTTCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FWIELAISQHFYYELHFPTDCRG*NPFSKR Trigger: CCGCTTTGAAAAGGGGTTGCAGCCTCGACAGTCTGT...GGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | TGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAGTTCTTCCTCCAGCTaGTGGGACTCCTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: WIELAISQHFYYELHFPLSSSSS*WDSSFT Trigger: TGTGAAGGAGGAGTCCCAGCAGCTGGAGGAAGAACT...AAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGGCACGTTTTCAACCTTaGGCGTGCGGATGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELAISQHFYYELHFPLNLARFQP*ACGCAP Trigger: TGGAGCACATCCGCACGCCCAAGGTTGAAAACGTGC...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGAATCCTGAGGGGTGTTaGCTGTGCTGTGGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELAISQHFYYELHFPLNLNPEGC*LCCGLR Trigger: CCTCAGACCACAGCACAGCCAACACCCCTCAGGATT...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| 3UTR CAA 72 bp | CACATATCCCAGTCTGAAAGCCCACAATCCCAAGTCTaGTCTTCAGTATCACAGCCCAACATATTAATAACC | + |
|
Preference number: 4 (lower is better) Translates to: HISQSESPQSQV*SSVSQPNILIT Trigger: GGTTATTAATATGTTGGGCTGTGATACTGAAGACAAGACTTGGGATTGTGGGCTTTCAGACTGGGATATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| 3UTR CAA 72 bp | GCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTaGAAGCTCTTATTTCATATACTTTGGCCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSLVGFMSSKA*KLLFHILWPLN Trigger: ATTCAGAGGCCAAAGTATATGAAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTCCACGAATATGACGTaGGTGGCCGTCAGATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDRTCHFSTFLLRIALSPSTNMT*VAVRYK Trigger: TTTGTATCTGACGGCCACTCACGTCATATTCGTGGA...AGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | TCCATTTCCTTTCTTGCATTTCCAACAATTACGCTGACGGGAACTTGTAGTGTTACTTCCAGCATTTTCTaGAGACTGTTCCTCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SISFLAFPTITLTGTCSVTSSIF*RLFLMT Trigger: CGTCATGAGGAACAGTCTTCAGAAAATGCTGGAAGT...AACACTACAAGTTCCCGTCAGCGTAATTGTTGGAAATGCAAGAAAGGAAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCGCCAGACACACTCAATaGACTGGTCGATTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLDRTCHFSTFLLRIALSARHTQ*TGRLLE Trigger: CTCCAGTAATCGACCAGTTCATTGAGTGTGTCTGGC...GGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | ATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTTGCAATGAAGATCCCTaGATCCATGATGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MQMEQAVMLGVSSGLLKSCNEDP*IHDGFD Trigger: ATCAAAGCCATCATGGATGCAGGGATCTTCATTGCA...ACTTTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR GCA 90 bp | CAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAATTGCTGGGCTCACTTTaGTTACTCTTCACTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPATGSEIKVPTLSGMGELLGSL*LLFTLV Trigger: TACCAAAGTGAAGAGTAAGCAAAGTGAGCCCAGCAA...TTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CATGCAGGCATTTCTGATACAGGATTAATATTCTGCTGTGCTGTCAGAAATGATTCGCCTGCTTTTCAATaGTGGAGATCTGACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HAGISDTGLIFCCAVRNDSPAFQ*WRSDCA Trigger: TGCACAGTCAGATCTCCACCATTGAAAAGCAGGCGA...ATCATTTCTGACAGCACAGCAGAATATTAATCCTGTATCAGAAATGCCTGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | GGACCACAAAGAGTAGGTTCTTTCTTGAATCGTATGCTGTGGTTTCAACACAGGACAAGTTGTACGATCTaGAAGTTCTTGCAGCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GPQRVGSFLNRMLWFQHRTSCTI*KFLQRI Trigger: TATTCGCTGCAAGAACTTCCAGATCGTACAACTTGT...CCTGTGTTGAAACCACAGCATACGATTCAAGAAAGAACCTACTCTTTGTGGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR CCA 90 bp | GCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGACACACTCAATGAACTaGTCGATTACTGGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ATGSEIKVPTLSGMGETRTHSMN*SITGEI Trigger: AATCTCTCCAGTAATCGACCAGTTCATTGAGTGTGT...CCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | TTCTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCATGCTCACCACCACTaGGAGATCGACAGCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FWIELAISQHFYYELHFPHAHHH*EIDSSN Trigger: ATTTGAGCTGTCGATCTCCCAGTGGTGGTGAGCATG...GGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| 3UTR CAA 72 bp | ATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTGCCTaGAGGGCGAGGTATCTTATTTATCTACAGCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: MLGVSSGLLKSA*RARYLIYLQHV Trigger: TACATGCTGTAGATAAATAAGATACCTCGCCCTCAAGGCACTTTTTAATAAGCCTGAAGATACCCCCAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | TCCATTTCCTTTCTTGCATTTCCAACAATTACGCTGACGGGAACTTGTAGTGTTCTCTATTCACATCGCTaGGCTGCCAATAATTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SISFLAFPTITLTGTCSVLYSHR*AANNYQ Trigger: CTGATAATTATTGGCAGCTCAGCGATGTGAATAGAG...AACACTACAAGTTCCCGTCAGCGTAATTGTTGGAAATGCAAGAAAGGAAATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCACTTGCCCCTTCCTCTaGAACTGCCTTTGCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FWIELAISQHFYYELHFPTCPFL*NCLCNE Trigger: TTCATTGCAAAGGCAGTTTCAGAGGAAGGGGCAAGT...GGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAACACACTCAATGAACTaGTCGATTACTGGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPTHSMN*SITGEI Trigger: AATCTCTCCAGTAATCGACCAGTTCATTGAGTGTGT...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR TCA 90 bp | CTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTCTCTATTCACATCGCTaGGCTGCCAATAATTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDRTCHFSTFLLRIALSPLYSHR*AANNYQ Trigger: CTGATAATTATTGGCAGCTCAGCGATGTGAATAGAG...AGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGGTAGCTGTTGTCGCCTaGTTTTCAATGGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ELAISQHFYYELHFPLNLVAVVA*FSMVEI Trigger: GATCTCCACCATTGAAAAGCAGGCGACAACAGCTAC...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGCCCTGCAGCACGATTTaGCATCGCATTAAGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELAISQHFYYELHFPLNLPCSTI*HRIKFR Trigger: CCTAAACTTAATGCGATGGCAAATCGTGCTGCAGGG...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR GCA 90 bp | TGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAACTGTTCCGTTAGCTaGCAGACACACTCAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WIELAISQHFYYELHFPLNCSVS*QTHSMN Trigger: GTTCATTGAGTGTGTCTGGCAGCTAACGGAACAGTT...AAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | TTCTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCCTGCTTTTCAATGGTaGAGATCTGACTGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FWIELAISQHFYYELHFPPAFQW*RSDCAE Trigger: TTCTGCACAGTCAGATCTCCACCATTGAAAAGCAGG...GGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTTTGTACAAGGCATGCAGGCATTTCTGATACAGGATTAATATTCTGCACACACTCAATGAACTaGTCGATTACTGGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VLFCTRHAGISDTGLIFCTHSMN*SITGEI Trigger: AATCTCTCCAGTAATCGACCAGTTCATTGAGTGTGT...GCAGAATATTAATCCTGTATCAGAAATGCCTGCATGCCTTGTACAAAACAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTGCTTACTCTTCACTTTaGTACCATGTAAGTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LDRTCHFSTFLLRIALSPAYSSL*YHVSGL Trigger: AAGTCCACTTACATGGTACCAAAGTGAAGAGTAAGC...AGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CCA 90 bp | TGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTACAAGTTGTACGATCTaGAAGTTCTTGCAGCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: WIELAISQHFYYELHFPLTSCTI*KFLQRI Trigger: TATTCGCTGCAAGAACTTCCAGATCGTACAACTTGT...AAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS TCA 90 bp | GGGCAGGAAATCGCCGTCTGCTCCGGAACTTGGAGCTGCCCACGATaGTGTGTGCCGTGGCCGATCTGGGGACGTACAGTTCCGTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GQEIAVCSGTWSCPR*CVPWPIWGRTVPWG Trigger: ACCCCACGGAACTGTACGTCCCCAGATCGGCCACGGCACACATCATCGTGGGCAGCTCCAAGTTCCGGAGCAGACGGCGATTTCCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS TCA 90 bp | GCCACCGAGCACACCTGGGCCGTTCTGTCCCAGCCGTCAGAACAGTaGACAAGCACACTTGCCCCTTCCTCTGAAACTGCCTTTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ATEHTWAVLSQPSEQ*TSTLAPSSETAFAM Trigger: CATTGCAAAGGCAGTTTCAGAGGAAGGGGCAAGTGTGCTTGTTCACTGTTCTGACGGCTGGGACAGAACGGCCCAGGTGTGCTCGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGCGCACGTTTTCAACCTaGGGCGTGCGGATGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSRHMLCQERLSGQPWVRTFST*GVRMCS Trigger: GGAGCACATCCGCACGCCCAAGGTTGAAAACGTGCG...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGCGCACGTTTTCAACCTaGGGCGTGCGGATGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPEMPKSDSHASSLVGFMRTFST*GVRMCS Trigger: GGAGCACATCCGCACGCCCAAGGTTGAAAACGTGCG...CATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS GCA 90 bp | ACTGCCTTTGCAATGAAGATCCCTGCATCCATGATGGCTTTGATGTaGCTCAGCCAGCCTGAGTTCTCCAGTCCCCACAGGAAATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: TAFAMKIPASMMALM*LSQPEFSSPHRKSL Trigger: GAGTGATTTCCTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCACATCAAAGCCATCATGGATGCAGGGATCTTCATTGCAAAGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS CCA 90 bp | ACGTCGTGGCAGTCTCTCTCCTGTGGAATGACAAGTTGTACGATCTaGAAGTTCTTGCAGCGAATAAGCAGAGGGCAGCCCGTAGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSWQSLSCGMTSCTI*KFLQRISRGQPVAV Trigger: AACAGCTACGGGCTGCCCTCTGCTTATTCGCTGCAAGAACTTCCAGATCGTACAACTTGTCATTCCACAGGAGAGAGACTGCCACGACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS TCA 90 bp | GAAGATCCCTGCATCCATGATGGCTTTGATGTGCCTCAGCCAGCCTaGGTTCTCCAGTCCCCACAGGAAATCACTCATAGAGGGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: EDPCIHDGFDVPQPA*VLQSPQEITHRGRF Trigger: AAATCTCCCTCTATGAGTGATTTCCTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCACATCAAAGCCATCATGGATGCAGGGATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS GCA 90 bp | CCCATTCGCTTGTATTCTTCACTAAGGTCAACCAGCAACCAGCCCTaGTCCCGTTCTTCCTTATCCAGCTTGGGGTTGAAGGAAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIRLYSSLRSTSNQP*SRSSLSSLGLKEKQ Trigger: CTGCTTTTCCTTCAACCCCAAGCTGGATAAGGAAGAACGGGAGCAGGGCTGGTTGCTGGTTGACCTTAGTGAAGAATACAAGCGAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS CCA 90 bp | TACTTCACTGGCCGTGCAAGGCGTATCAGAGAGATGTACACGTCGTaGCAGTCTCTCTCCTGTGGAATGACAAGTTGTACGATCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YFTGRARRIREMYTS*QSLSCGMTSCTIWK Trigger: CTTCCAGATCGTACAACTTGTCATTCCACAGGAGAGAGACTGCCACGACGTGTACATCTCTCTGATACGCCTTGCACGGCCAGTGAAGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAAGAGAACCCCGAGTGTTaGCTGGGCTCACTTTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGGLLSRHMLCQERLSGQENPEC*LGSLCL Trigger: TAAGCAAAGTGAGCCCAGCAAACACTCGGGGTTCTC...TTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | TTGGCTGTGCTGTGGTCTGAGGTAGAGAACCCCGAGTGTTTGCTGGGCTCACTTCTTTTTCCATTCTCATaGAGTTCTCGCCTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAVLWSEVENPECLLGSLLFPFS*SSRLSF Trigger: GAAGGAGAGGCGAGAACTCAATGAGAATGGAAAAAG...AAGTGAGCCCAGCAAACACTCGGGGTTCTCTACCTCAGACCACAGCACAGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR CAA 90 bp | TCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGGGCTTTCCTGATGGCTaGGAGCATCTGCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQHYQVWEKPGGLLSRHMGFPDG*EHLLIL Trigger: GAGGATGAGCAGATGCTCCAAGCCATCAGGAAAGCC...CATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | CAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGTCCAGGCTTTCCTGATGGCTaGGAGCATCTGCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QKCQNQIATHLPWWVLCPGFPDG*EHLLIL Trigger: GAGGATGAGCAGATGCTCCAAGCCATCAGGAAAGCC...TGGACATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGTGGATTTCTGAGTTCAAGGAAAGCCTGGTCTACAGAGTGAGTTCTAGGAAGTCACTTCCAGGATaGGCTTTCCTGATGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRWISEFKESLVYRVSSRKSLPG*AFLMAW Trigger: CCAAGCCATCAGGAAAGCCAATCCTGGAAGTGACTT...CCTAGAACTCACTCTGTAGACCAGGCTTTCCTTGAACTCAGAAATCCACCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGAGTGAACAAGCACACTaGCCCCTTCCTCTGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLSRHMLCQERLSGQPWSEQAH*PLPLKL Trigger: CAGTTTCAGAGGAAGGGGCAAGTGTGCTTGTTCACT...CCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS TCA 90 bp | GGCAGGAATAAACATGATGCTGAATGTGAGTCAGAAACCTCTCGTTaGACTCAAAGGCGCAAGGGAACTGTTCCGTTAGCTGCCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GRNKHDAECESETSR*TQRRKGTVPLAARH Trigger: GTGTCTGGCAGCTAACGGAACAGTTCCCTTGCGCCTTTGAGTTCAACGAGAGGTTTCTGACTCACATTCAGCATCATGTTTATTCCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS GCA 90 bp | CACGAATATGACGTGAGTGGCCGTCAGATACAAAGTTCCCAGCGCTaGCTTTTTACAAGACACTCTGTCTACCAAGCGCACGTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HEYDVSGRQIQSSQR*LFTRHSVYQAHVFN Trigger: GTTGAAAACGTGCGCTTGGTAGACAGAGTGTCTTGTAAAAAGGCAGCGCTGGGAACTTTGTATCTGACGGCCACTCACGTCATATTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGAAGAGTGAACAAGCACACTaGCCCCTTCCTCTGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRHMLCQERLSGQPWVKSEQAH*PLPLKL Trigger: CAGTTTCAGAGGAAGGGGCAAGTGTGCTTGTTCACT...CTTCACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS CCA 90 bp | AAGGCGTATCAGAGAGATGTACACGTCGTGGCAGTCTCTCTCCTGTaGAATGACAAGTTGTACGATCTGGAAGTTCTTGCAGCGAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KAYQRDVHVVAVSLL*NDKLYDLEVLAANK Trigger: CTTATTCGCTGCAAGAACTTCCAGATCGTACAACTTGTCATTCCACAGGAGAGAGACTGCCACGACGTGTACATCTCTCTGATACGCCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAATGCCAAAATCAGATAGCCACGCATCTTCCCTGGTGGGTTTTATGTCCAGGGAGGCCCATTCGCTaGTATTCTTCACTAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QKCQNQIATHLPWWVLCPGRPIR*YSSLRS Trigger: TGACCTTAGTGAAGAATACAAGCGAATGGGCCTCCC...TGGACATAAAACCCACCAGGGAAGATGCGTGGCTATCTGATTTTGGCATTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGCTTTCCTGATGGCTaGGAGCATCTGCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPGFPDG*EHLLIL Trigger: GAGGATGAGCAGATGCTCCAAGCCATCAGGAAAGCC...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | TTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAGCAGACACATGCTATGCCAAAGTCACTTCCAGGATaGGCTTTCCTGATGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSGMGETRRAFKQTHAMPKSLPG*AFLMAW Trigger: CCAAGCCATCAGGAAAGCCAATCCTGGAAGTGACTT...TGGCATAGCATGTGTCTGCTTAAAAGCCCTCCTGGTTTCTCCCATACCTGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | CACGCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTAGTGAACAAGCACACTaGCCCCTTCCTCTGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HASSLVGFMSSKALKLLFSEQAH*PLPLKL Trigger: CAGTTTCAGAGGAAGGGGCAAGTGTGCTTGTTCACT...AAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTGTCAGAAACCTCTCGTaGAACTCAAAGGCGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EVKSKSQHYQVWEKPGGLVRNLS*NSKAQG Trigger: CCCTTGCGCCTTTGAGTTCAACGAGAGGTTTCTGAC...AAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS TCA 90 bp | GAATCCAGGTTTCTTTTCTTGTGTCAGGTGCATTTTCCACGAATATaGCGTGAGTGGCCGTCAGATACAAAGTTCCCAGCGCTGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESRFLFLCQVHFPRI*REWPSDTKFPALPF Trigger: AAAAGGCAGCGCTGGGAACTTTGTATCTGACGGCCACTCACGTCATATTCGTGGAAAATGCACCTGACACAAGAAAAGAAACCTGGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000174205.8 |
||
| CDS TCA 90 bp | CCGTGGGGTAAGAGTCACAAACTCTGTAGTCTCTATTCACATCGCTaGGCTGCCAATAATTATCAGGGAGGCCCATTCGCTTGTATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWGKSHKLCSLYSHR*AANNYQGGPFACIL Trigger: AAGAATACAAGCGAATGGGCCTCCCTGATAATTATTGGCAGCTCAGCGATGTGAATAGAGACTACAGAGTTTGTGACTCTTACCCCACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTAAGCAGACACATGCTATGCCAGGAAAGACTGTCTGGACAACCTTGGGTGTTATCCAGCTTGGGGTaGAAGGAAAAGCAGTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSRHMLCQERLSGQPWVLSSLG*KEKQYS Trigger: GCTATACTGCTTTTCCTTCAACCCCAAGCTGGATAA...CACCCAAGGTTGTCCAGACAGTCTTTCCTGGCATAGCATGTGTCTGCTTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS TCA 90 bp | TCTTCCACAGGTTGGACCACAAAGAGTAGGTTCTTTCTTGAATCTTaGGTTCTCGCCTCTCCTTCTGGCTATTACACAGGAAGTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSTGWTTKSRFFLES*VLASPSGYYTGSSQ Trigger: TTGGGAACTTCCTGTGTAATAGCCAGAAGGAGAGGCGAGAACTCAAGATTCAAGAAAGAACCTACTCTTTGTGGTCCAACCTGTGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS GCA 90 bp | GGAGATCTGACTGTGCAGAATCCAGGTTTCTTTTCTTGTGTCAGGTaGATTTTCCACGAATATGACGTGAGTGGCCGTCAGATACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GDLTVQNPGFFSCVR*IFHEYDVSGRQIQS Trigger: ACTTTGTATCTGACGGCCACTCACGTCATATTCGTGGAAAATGCACCTGACACAAGAAAAGAAACCTGGATTCTGCACAGTCAGATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCTGAATGCAACCTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGGGAGGCCCATTCGCTaGTATTCTTCACTAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPECNLQLEVKSKSQHYQGRPIR*YSSLRS Trigger: TGACCTTAGTGAAGAATACAAGCGAATGGGCCTCCC...CTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAGGTTGCATTCAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTTTTGTACAAGGCATGCAGGCATTTCTGATACAGGATTAATATTCTGCGTCAGAAACCTCTCGTaGAACTCAAAGGCGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLFCTRHAGISDTGLIFCVRNLS*NSKAQG Trigger: CCCTTGCGCCTTTGAGTTCAACGAGAGGTTTCTGAC...GCAGAATATTAATCCTGTATCAGAAATGCCTGCATGCCTTGTACAAAACAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTGTGGAATGACAAGTaGTACGATCTGGAAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LEVKSKSQHYQVWEKPGGLWNDK*YDLEVL Trigger: AAGAACTTCCAGATCGTACAACTTGTCATTCCACAG...CCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | ATTATTATTATAGGTGAAGTTGCATGGAGCTGTAGGCAGATGAAGGCTCCCCTGTTATCCAGCTTGGGGTaGAAGGAAAAGCAGTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIIIGEVAWSCRQMKAPLLSSLG*KEKQYS Trigger: GCTATACTGCTTTTCCTTCAACCCCAAGCTGGATAA...CAGGGGAGCCTTCATCTGCCTACAGCTCCATGCAACTTCACCTATAATAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR CAA 90 bp | CACGCATCTTCCCTGGTGGGTTTTATGTCCAGCAAAGCCTTGAAGCTCTTATTTAGAGTAGGTTCTTTCTaGAATCTTGAGTTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HASSLVGFMSSKALKLLFRVGSF*NLEFSP Trigger: AGGCGAGAACTCAAGATTCAAGAAAGAACCTACTCT...AAATAAGAGCTTCAAGGCTTTGCTGGACATAAAACCCACCAGGGAAGATGCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGTGCTTACTCTTCACTTaGGTACCATGTAAGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LEVKSKSQHYQVWEKPGGCLLFT*VPCKWT Trigger: AGTCCACTTACATGGTACCAAAGTGAAGAGTAAGCA...CCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | CTGGATAGAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTGGGAGGCCCATTCGCTaGTATTCTTCACTAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDRTCHFSTFLLRIALSPGRPIR*YSSLRS Trigger: TGACCTTAGTGAAGAATACAAGCGAATGGGCCTCCC...AGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTCTATCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCGGGGTCTGAGCTTTTTAAATTGTCTTGGGTTAGAATCAGAGCAGAATCTGGAGAGATTTCTTTaGGGTCACCATCTAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGRGLSFLNCLGLESEQNLERFL*GHHLSC Trigger: GCAACTTAGATGGTGACCCAAAAGAAATCTCTCCAG...ATTCTGCTCTGATTCTAACCCAAGACAATTTAAAAAGCTCAGACCCCGACCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS-3UTR CAA 90 bp | GTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTACTGGAGAGATTTCTTTaGGGTCACCATCTAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKSKSQHYQVWEKPGGLLLERFL*GHHLSC Trigger: GCAACTTAGATGGTGACCCAAAAGAAATCTCTCCAG...TAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | ATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTCTGGAGAGATTTCTTTaGGGTCACCATCTAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MQMEQAVMLGVSSGLLKSLERFL*GHHLSC Trigger: GCAACTTAGATGGTGACCCAAAAGAAATCTCTCCAG...ACTTTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | GCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGAGTAGGTTCTTTCTaGAATCTTGAGTTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ATGSEIKVPTLSGMGETRRVGSF*NLEFSP Trigger: AGGCGAGAACTCAAGATTCAAGAAAGAACCTACTCT...CCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCATTTGCTGGGCTCACTTaGCTTACTCTTCACTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPFAGLT*LTLHFG Trigger: ACCAAAGTGAAGAGTAAGCAAAGTGAGCCCAGCAAA...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | GTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTATCCAGGTTTCTTTTCTaGTGTCAGGTGCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKSKSQHYQVWEKPGGLLSRFLF*CQVHFP Trigger: TGGAAAATGCACCTGACACAAGAAAAGAAACCTGGA...TAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | CTGCAACTGGAAGTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCATCCAGGTTTCTTTTCTaGTGTCAGGTGCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQLEVKSKSQHYQVWEKPSRFLF*CQVHFP Trigger: TGGAAAATGCACCTGACACAAGAAAAGAAACCTGGA...TGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCACTTCCAGTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | ATGCAGATGGAACAAGCTGTCATGCTGGGGGTATCTTCAGGCTTATTAAAAAGTTCCAGGTTTCTTTTCTaGTGTCAGGTGCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MQMEQAVMLGVSSGLLKSSRFLF*CQVHFP Trigger: TGGAAAATGCACCTGACACAAGAAAAGAAACCTGGA...ACTTTTTAATAAGCCTGAAGATACCCCCAGCATGACAGCTTGTTCCATCTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGGTCAGAAACCTCTCGTaGAACTCAAAGGCGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELAISQHFYYELHFPLNLVRNLS*NSKAQG Trigger: CCCTTGCGCCTTTGAGTTCAACGAGAGGTTTCTGAC...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTTTTGTACAAGGCATGCAGGCATTTCTGATACAGGATTAATATTCTGCCTGTGGAATGACAAGTaGTACGATCTGGAAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLFCTRHAGISDTGLIFCLWNDK*YDLEVL Trigger: AAGAACTTCCAGATCGTACAACTTGTCATTCCACAG...GCAGAATATTAATCCTGTATCAGAAATGCCTGCATGCCTTGTACAAAACAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | CATGCAGGCATTTCTGATACAGGATTAATATTCTGCTGTGCTGTCAGAAATGATTTATCCAGCTTGGGGTaGAAGGAAAAGCAGTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: HAGISDTGLIFCCAVRNDLSSLG*KEKQYS Trigger: GCTATACTGCTTTTCCTTCAACCCCAAGCTGGATAA...ATCATTTCTGACAGCACAGCAGAATATTAATCCTGTATCAGAAATGCCTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174205.8 |
||
| CDS-3UTR CAA 90 bp | GAACTTGCCATTTCTCAACATTTTTACTACGAATTGCACTTTCCCCTTAATTTGAAGTCACTTCCAGGATaGGCTTTCCTGATGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELAISQHFYYELHFPLNLKSLPG*AFLMAW Trigger: CCAAGCCATCAGGAAAGCCAATCCTGGAAGTGACTT...CAAATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 |
||
| CDS-3UTR CAA 90 bp | GTGAAATCAAAGTCCCAACATTATCAGGTATGGGAGAAACCAGGAGGGCTTTTAAACCGTGAACCCTTTTaGCTTTTTCCATTCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VKSKSQHYQVWEKPGGLLNREPF*LFPFSL Trigger: CAATGAGAATGGAAAAAGCAAAAAGGGTTCACGGTT...TAAAAGCCCTCCTGGTTTCTCCCATACCTGATAATGTTGGGACTTTGATTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048890.17 |
||
| CDS GCA 72 bp | TCTGCTCCGGAACTTGGAGCTGCCCACGATGATGTGTaGCGTGGCCGATCTGGGGACGTACAGTTCCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAPELGAAHDDV*RGRSGDVQFRG Trigger: CCCACGGAACTGTACGTCCCCAGATCGGCCACGGCACACATCATCGTGGGCAGCTCCAAGTTCCGGAGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS CCA 72 bp | TCCTCCAGGCACCGAGCGCTGAAGCCGGAAAGGGGCTaGCTGCTCCTGCAGATGGAGGCATGGCTGTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSRHRALKPERG*LLLQMEAWLSL Trigger: TAAAGACAGCCATGCCTCCATCTGCAGGAGCAGCCAGCCCCTTTCCGGCTTCAGCGCTCGGTGCCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | ATCGCCGTCTGCTCCGGAACTTGGAGCTGCCCACGATaGTGTGTGCCGTGGCCGATCTGGGGACGTACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: IAVCSGTWSCPR*CVPWPIWGRTV Trigger: AACTGTACGTCCCCAGATCGGCCACGGCACACATCATCGTGGGCAGCTCCAAGTTCCGGAGCAGACGGCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | CACACCTGGGCCGTTCTGTCCCAGCCGTCAGAACAGTaGACAAGCACACTTGCCCCTTCCTCTGAAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HTWAVLSQPSEQ*TSTLAPSSETA Trigger: GGCAGTTTCAGAGGAAGGGGCAAGTGTGCTTGTTCACTGTTCTGACGGCTGGGACAGAACGGCCCAGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
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| CDS GCA 72 bp | GCAATGAAGATCCCTGCATCCATGATGGCTTTGATGTaGCTCAGCCAGCCTGAGTTCTCCAGTCCCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AMKIPASMMALM*LSQPEFSSPHR Trigger: CCTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCACATCAAAGCCATCATGGATGCAGGGATCTTCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | GTAGCTGTTGTCGCCTGCTTTTCAATGGTGGAGATCTaGCTGTGCAGAATCTTGGGCGTGCGGATGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VAVVACFSMVEI*LCRILGVRMCS Trigger: GGAGCACATCCGCACGCCCAAGATTCTGCACAGTCAGATCTCCACCATTGAAAAGCAGGCGACAACAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173957.2 |
||
| CDS CCA 72 bp | GGCCGTGCAAGGCGTATCAGAGAGATGTACACGTCGTaGCAGTCTCTCTCCTGTGGAATGACAAGTTGTACG | + |
|
Preference number: 6 (lower is better) Translates to: GRARRIREMYTS*QSLSCGMTSCT Trigger: CGTACAACTTGTCATTCCACAGGAGAGAGACTGCCACGACGTGTACATCTCTCTGATACGCCTTGCACGGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS CAA 72 bp | GCCTTTGCAATGAAGATCCCTGCATCCATGATGGCTTaGATGTGCCTCAGCCAGCCTGAGTTCTCCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AFAMKIPASMMA*MCLSQPEFSSP Trigger: GGGACTGGAGAACTCAGGCTGGCTGAGGCACATCAAAGCCATCATGGATGCAGGGATCTTCATTGCAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS CAA 90 bp | CAGTCTCTCTCCTGTGGAATGACAAGTTGTACGATCTGGAAGTTCTaGCAGCGAATAAGCAGAGGGCAGCCCGTAGCTGTTGTCGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QSLSCGMTSCTIWKF*QRISRGQPVAVVAC Trigger: GCAGGCGACAACAGCTACGGGCTGCCCTCTGCTTATTCGCTGCAAGAACTTCCAGATCGTACAACTTGTCATTCCACAGGAGAGAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS GCA 72 bp | GACGTGAGTGGCCGTCAGATACAAAGTTCCCAGCGCTaGCTTTTTACAAGACACTCTGTCTACCAAGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DVSGRQIQSSQR*LFTRHSVYQAH Trigger: GTGCGCTTGGTAGACAGAGTGTCTTGTAAAAAGGCAGCGCTGGGAACTTTGTATCTGACGGCCACTCACGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000174205.8 |
||
| CDS CCA 72 bp | TGTGTGCCGTGGCCGATCTGGGGACGTACAGTTCCGTaGGGTAAGAGTCACAAACTCTGTAGTCTCTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: CVPWPIWGRTVP*GKSHKLCSLYS Trigger: TGAATAGAGACTACAGAGTTTGTGACTCTTACCCCACGGAACTGTACGTCCCCAGATCGGCCACGGCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS CAA 90 bp | TCTGAAACTGCCTTTGCAATGAAGATCCCTGCATCCATGATGGCTTaGATGTGCCTCAGCCAGCCTGAGTTCTCCAGTCCCCACAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SETAFAMKIPASMMA*MCLSQPEFSSPHRK Trigger: TTTCCTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCACATCAAAGCCATCATGGATGCAGGGATCTTCATTGCAAAGGCAGTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | TGCATCCATGATGGCTTTGATGTGCCTCAGCCAGCCTaGGTTCTCCAGTCCCCACAGGAAATCACTCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: CIHDGFDVPQPA*VLQSPQEITHR Trigger: TCTATGAGTGATTTCCTGTGGGGACTGGAGAACTCAGGCTGGCTGAGGCACATCAAAGCCATCATGGATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS CCA 72 bp | CAGTCTCTCTCCTGTGGAATGACAAGTTGTACGATCTaGAAGTTCTTGCAGCGAATAAGCAGAGGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QSLSCGMTSCTI*KFLQRISRGQP Trigger: GGGCTGCCCTCTGCTTATTCGCTGCAAGAACTTCCAGATCGTACAACTTGTCATTCCACAGGAGAGAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | TTTCTTGTGTCAGGTGCATTTTCCACGAATATGACGTaGGTGGCCGTCAGATACAAAGTTCCCAGCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FLVSGAFSTNMT*VAVRYKVPSAA Trigger: GGCAGCGCTGGGAACTTTGTATCTGACGGCCACTCACGTCATATTCGTGGAAAATGCACCTGACACAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000174205.8 |
||
| CDS GCA 72 bp | TTGTATTCTTCACTAAGGTCAACCAGCAACCAGCCCTaGTCCCGTTCTTCCTTATCCAGCTTGGGGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LYSSLRSTSNQP*SRSSLSSLGLK Trigger: CTTCAACCCCAAGCTGGATAAGGAAGAACGGGAGCAGGGCTGGTTGCTGGTTGACCTTAGTGAAGAATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS CAA 72 bp | TCCTGTGGAATGACAAGTTGTACGATCTGGAAGTTCTaGCAGCGAATAAGCAGAGGGCAGCCCGTAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SCGMTSCTIWKF*QRISRGQPVAV Trigger: AACAGCTACGGGCTGCCCTCTGCTTATTCGCTGCAAGAACTTCCAGATCGTACAACTTGTCATTCCACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | AGATGTACACGTCGTGGCAGTCTCTCTCCTGTGGAATaGCAAGTTGTACGATCTGGAAGTTCTTGCAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RCTRRGSLSPVE*QVVRSGSSCSE Trigger: TTCGCTGCAAGAACTTCCAGATCGTACAACTTGTCATTCCACAGGAGAGAGACTGCCACGACGTGTACATCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS GCA 72 bp | GTCTTCATTCTCATAGCCTTTCCCTGCAGCACGATTTaGCATCGCATTAAGTTTAGGCCTTGTGTCCACGAC | + |
|
Preference number: 6 (lower is better) Translates to: VFILIAFPCSTI*HRIKFRPCVHD Trigger: GTCGTGGACACAAGGCCTAAACTTAATGCGATGGCAAATCGTGCTGCAGGGAAAGGCTATGAGAATGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS CCA 72 bp | CAGAGAGATGTACACGTCGTGGCAGTCTCTCTCCTGTaGAATGACAAGTTGTACGATCTGGAAGTTCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QRDVHVVAVSLL*NDKLYDLEVLA Trigger: TGCAAGAACTTCCAGATCGTACAACTTGTCATTCCACAGGAGAGAGACTGCCACGACGTGTACATCTCTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS CCA 72 bp | ATACATCCCATTCCAAAACTTATAGGTGAAGTTGCATaGAGCTGTAGGCAGATGAAGGCTCCCCTGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IHPIPKLIGEVA*SCRQMKAPLGL Trigger: CAGACCCAGGGGAGCCTTCATCTGCCTACAGCTCCATGCAACTTCACCTATAAGTTTTGGAATGGGATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048898.17 ENSMUST00000173487.8 |
||
| CDS TCA 72 bp | TTTCTTTTCTTGTGTCAGGTGCATTTTCCACGAATATaGCGTGAGTGGCCGTCAGATACAAAGTTCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLFLCQVHFPRI*REWPSDTKFPA Trigger: CGCTGGGAACTTTGTATCTGACGGCCACTCACGTCATATTCGTGGAAAATGCACCTGACACAAGAAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | GTAGCTGTTGTCGCCTGCTTTTCAATGGTGGAGATCTaGCTGTGCAGAATCCAGGTTTCTTTTCTTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VAVVACFSMVEI*LCRIQVSFLVS Trigger: TGACACAAGAAAAGAAACCTGGATTCTGCACAGTCAGATCTCCACCATTGAAAAGCAGGCGACAACAGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | AAGAGTCACAAACTCTGTAGTCTCTATTCACATCGCTaGGCTGCCAATAATTATCAGGGAGGCCCATTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: KSHKLCSLYSHR*AANNYQGGPFA Trigger: AGCGAATGGGCCTCCCTGATAATTATTGGCAGCTCAGCGATGTGAATAGAGACTACAGAGTTTGTGACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173957.2 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | AAGGGAACTGTTCCGTTAGCTGCCAGACACACTCAATaGACTGGTCGATTACTGGAGAGATTTCTTTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KGTVPLAARHTQ*TGRLLERFLLG Trigger: ACCCAAAAGAAATCTCTCCAGTAATCGACCAGTTCATTGAGTGTGTCTGGCAGCTAACGGAACAGTTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048890.17 ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
||
| CDS TCA 72 bp | GGTTGGACCACAAAGAGTAGGTTCTTTCTTGAATCTTaGGTTCTCGCCTCTCCTTCTGGCTATTACACAGGA | + |
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Preference number: 6 (lower is better) Translates to: GWTTKSRFFLES*VLASPSGYYTG Trigger: TCCTGTGTAATAGCCAGAAGGAGAGGCGAGAACTCAAGATTCAAGAAAGAACCTACTCTTTGTGGTCCAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048898.17 ENSMUST00000173487.8 ENSMUST00000174205.8 |
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| CDS CAA 90 bp | CCCACTGACTTAAAAATGGCTTGTGCTACATTTATATTCCAGATCTaGAGGATCTTCCTCGAGGTAATGCTCAAGACAGGGGCACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PTDLKMACATFIFQI*RIFLEVMLKTGAQE Trigger: TTCCTGTGCCCCTGTCTTGAGCATTACCTCGAGGAAGATCCTCAAGATCTGGAATATAAATGTAGCACAAGCCATTTTTAAGTCAGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173487.8 |
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| CDS TCA 72 bp | TTAGGTTTGGGCTTCATTGTCTGGGTGTTGACCCACTaGCTTAAAAATGGCTTGTGCTACATTTATATTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGLGFIVWVLTH*LKNGLCYIYIP Trigger: TGGAATATAAATGTAGCACAAGCCATTTTTAAGTCAGTGGGTCAACACCCAGACAATGAAGCCCAAACCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173487.8 |
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