Pregenerated sensors for MTMR6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021987Ensembl transcript IDs: ENSMUST00000022563.9, ENSMUST00000224366.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGCGTCAAAGCTGCTTCTGTTGGACATTAGCTGGCTCCCCCAGTaGTCCCTTCTCTGCCCCTCCTATATTAAGAGTAAGGAAATATGC | + |
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Preference number: 1 (lower is better) Translates to: PASKLLLLDISWLPQ*SLLCPSYIKSKEIC Trigger: GCATATTTCCTTACTCTTAATATAGGAGGGGCAGAGAAGGGAGCACTGGGGGAGCCAGCTAATGTCCAACAGAAGCAGCTTTGACGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR TCA 90 bp | GAGATCAAACATCCTGTCCTCGGCTATAAAACCCACAGAATAAACTaGGAGTCTACTTTAAGGCTGTCCCATAAGTACTTTTCATGGCAC | + |
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Preference number: 1 (lower is better) Translates to: EIKHPVLGYKTHRIN*ESTLRLSHKYFSWH Trigger: GTGCCATGAAAAGTACTTATGGGACAGCCTTAAAGTAGACTCTCAGTTTATTCTGTGGGTTTTATAGCCGAGGACAGGATGTTTGATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR-3UTR GCA 90 bp | CCTATAAAGCAAAATAAACCTTTTCCTGCGTCAAAGCTGCTTCTGTTGGACATTAGCTGGCTCCCCCAGTaGTCCCTTCTCTGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PIKQNKPFPASKLLLLDISWLPQ*SLLCPS Trigger: GGAGGGGCAGAGAAGGGAGCACTGGGGGAGCCAGCT...AATGTCCAACAGAAGCAGCTTTGACGCAGGAAAAGGTTTATTTTGCTTTATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAACACAGCTCCAGAACTaGAAGCACATGCCACATCAG | + |
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Preference number: 2 (lower is better) Translates to: FANVCPVRHSGCFLCEHVTQLQN*KHMPHQ Trigger: CTGATGTGGCATGTGCTTTCAGTTCTGGAGCTGTGT...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCAGCTGCAGCTTGGAACAAATGACAACGAGAACAAAGCCTTCGGTAACATCTCAAGAGTTGCTATaGTCCTTTTCTCAGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: TVSCSLEQMTTRTKPSVTSQELL*SFSQLP Trigger: AGGTAGCTGAGAAAAGGATCATAGCAACTCTTGAGA...TGTTACCGAAGGCTTTGTTCTCGTTGTCATTTGTTCCAAGCTGCAGCTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTCTAAAACCACAACTTaGCTGGAACCAAGGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LLPTYVLYVTQDVFCVSMSKTTT*LEPRHK Trigger: TTTGTGCCTTGGTTCCAGTCAAGTTGTGGTTTTAGA...CATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTTGGATTTTTGTGACTaGAAAATCCACAGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: LLPTYVLYVTQDVFCVSMLDFCD*KIHSHT Trigger: TGTGTGACTGTGGATTTTGCAGTCACAAAAATCCAA...CATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR GCA 72 bp | AAGCTGCTTCTGTTGGACATTAGCTGGCTCCCCCAGTaGTCCCTTCTCTGCCCCTCCTATATTAAGAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: KLLLLDISWLPQ*SLLCPSYIKSK Trigger: CTTACTCTTAATATAGGAGGGGCAGAGAAGGGAGCACTGGGGGAGCCAGCTAATGTCCAACAGAAGCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR TCA 72 bp | GTGACTGCAAAATCCACAGTCACACAGCTCCAGAACTaGAAGCACATGCCACATCAGTCACTGAGGGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: VTAKSTVTQLQN*KHMPHQSLRVQ Trigger: CTGAACCCTCAGTGACTGATGTGGCATGTGCTTTCAGTTCTGGAGCTGTGTGACTGTGGATTTTGCAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR GCA 72 bp | TTGGACATTAGCTGGCTCCCCCAGTGCTCCCTTCTCTaGCCCTCCTATATTAAGAGTAAGGAAATATGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LDISWLPQCSLL*PSYIKSKEICS Trigger: GGAGCATATTTCCTTACTCTTAATATAGGAGGGGCAGAGAAGGGAGCACTGGGGGAGCCAGCTAATGTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR TCA 72 bp | AGCTCCAGAACTGAAAGCACATGCCACATCAGTCACTaGGGGTTCAGGTTGTCAGGTCTGTTTTCTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SSRTESTCHISH*GFRLSGLFSQS Trigger: ACTCTGAGAAAACAGACCTGACAACCTGAACCCTCAGTGACTGATGTGGCATGTGCTTTCAGTTCTGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR TCA 72 bp | GTCAGGTCTGTTTTCTCAGAGTTAGAGGAAAGCTACTaGGCGTGGCTGGAATTAACATCTGAATCAACAGAC | + |
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Preference number: 3 (lower is better) Translates to: VRSVFSELEESY*AWLELTSESTD Trigger: GTCTGTTGATTCAGATGTTAATTCCAGCCACGCTCAGTAGCTTTCCTCTAACTCTGAGAAAACAGACCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR TCA 72 bp | CATCCTGTCCTCGGCTATAAAACCCACAGAATAAACTaGGAGTCTACTTTAAGGCTGTCCCATAAGTACTTT | + |
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Preference number: 3 (lower is better) Translates to: HPVLGYKTHRIN*ESTLRLSHKYF Trigger: AAAGTACTTATGGGACAGCCTTAAAGTAGACTCTCAGTTTATTCTGTGGGTTTTATAGCCGAGGACAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR TCA 72 bp | GTACATACACACACTAGCACTCACTTCCTACAGAAATaGGTATGTTCTTGTTACAAATGGCACTTAGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: VHTHTSTHFLQK*VCSCYKWHLAD Trigger: GTCAGCTAAGTGCCATTTGTAACAAGAACATACTCATTTCTGTAGGAAGTGAGTGCTAGTGTGTGTATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| 3UTR TCA 72 bp | GAAATGAGTATGTTCTTGTTACAAATGGCACTTAGCTaGCTCACTCCTCTCAAGAGTTGCTATGATCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: EMSMFLLQMALS*LTPLKSCYDPF Trigger: AAAAGGATCATAGCAACTCTTGAGAGGAGTGAGTCAGCTAAGTGCCATTTGTAACAAGAACATACTCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GTGCGGCCCCCAAGTAATCAGAGTGCAGTTAGTTCTTCATATGAAATAAGGCTGCCGAGGGAGCACACTTaGGAGGTCCTGTCCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: VRPPSNQSAVSSSYEIRLPREHT*EVLSHP Trigger: TGGGTGGGACAGGACCTCCCAAGTGTGCTCCCTCGG...CAGCCTTATTTCATATGAAGAACTAACTGCACTCTGATTACTTGGGGGCCGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GTATGTCTACAACTTTCCATGGTGGAGCACTGCAGTGTGCGGCCCCCAAGTAATGTAGCGATTATCTGCTaGGCTGCTGCCCTCTATAGC | + |
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Preference number: 4 (lower is better) Translates to: VCLQLSMVEHCSVRPPSNVAIIC*AAALYS Trigger: GCTATAGAGGGCAGCAGCCCAGCAGATAATCGCTAC...ATTACTTGGGGGCCGCACACTGCAGTGCTCCACCATGGAAAGTTGTAGACATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GTATGTCTACAACTTTCCATGGTGGAGCACTGCAGTGTGCGGCCCCCAAGTAATGCACTGAATCACAAGTaGGCATCCAGAAGTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VCLQLSMVEHCSVRPPSNALNHK*ASRSGQ Trigger: CTGACCACTTCTGGATGCCCACTTGTGATTCAGTGC...ATTACTTGGGGGCCGCACACTGCAGTGCTCCACCATGGAAAGTTGTAGACATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | TCAACAACCCCTCCTGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTCCTGGCACTGAAGCCTaGCAATGGCTGACTACATCG | + |
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Preference number: 4 (lower is better) Translates to: STTPPAHVYRPSSQLYISPGTEA*QWLTTS Trigger: CGATGTAGTCAGCCATTGTCAGGCTTCAGTGCCAGG...AGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCAGGAGGGGTTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | GTATGTCTACAACTTTCCATGGTGGAGCACTGCAGTGTGCGGCCCCCAAGTAATATGTGCTCATGGATCTaGAGAAGAAACGCTTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: VCLQLSMVEHCSVRPPSNMCSWI*RRNASL Trigger: CAACGAAGCGTTTCTTCTTCAGATCCATGAGCACAT...ATTACTTGGGGGCCGCACACTGCAGTGCTCCACCATGGAAAGTTGTAGACATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAGGTTTTCAGGGCAGGTaGTTCAGGGTGGACAGCATG | + |
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Preference number: 4 (lower is better) Translates to: FANVCPVRHSGCFLCEHVGFQGR*FRVDSM Trigger: CATGCTGTCCACCCTGAATCACCTGCCCTGAAAACC...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAGACTACATCGACAAATaGCAGCCTCAGTGCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FANVCPVRHSGCFLCEHVDYIDK*QPQCPA Trigger: GGCAGGGCACTGAGGCTGCCATTTGTCGATGTAGTC...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GTATGTCTACAACTTTCCATGGTGGAGCACTGCAGTGTGCGGCCCCCAAGTAATGAAAGAGGCTGTATTTaGCTCCAAGACTGTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VCLQLSMVEHCSVRPPSNERGCI*LQDCQS Trigger: AGACTGACAGTCTTGGAGCCAAATACAGCCTCTTTC...ATTACTTGGGGGCCGCACACTGCAGTGCTCCACCATGGAAAGTTGTAGACATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAACAGACTGCCGAGGATaGAGCGTCCGATCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: FANVCPVRHSGCFLCEHVTDCRG*SVRSNW Trigger: CCAGTTTGATCGGACGCTCCATCCTCGGCAGTCTGT...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR GCA 90 bp | TCAACAACCCCTCCTGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTTTGGCATCCGACAGTTaGCAGTTTGCATTGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: STTPPAHVYRPSSQLYISLASDS*QFALGT Trigger: AGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAA...AGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCAGGAGGGGTTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR GCA 90 bp | TCAACAACCCCTCCTGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTACAGTAGCGATTATCTaGTGGGCTGCTGCCCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: STTPPAHVYRPSSQLYISTVAII*WAAALY Trigger: ATAGAGGGCAGCAGCCCAGCAGATAATCGCTACTGT...AGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCAGGAGGGGTTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GTGCGGCCCCCAAGTAATCAGAGTGCAGTTAGTTCTTCATATGAAATAAGGCTGGTTGCCAGTTTGCATTaGGCACTCCCATCCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VRPPSNQSAVSSSYEIRLVASLH*ALPSSH Trigger: ATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAAC...CAGCCTTATTTCATATGAAGAACTAACTGCACTCTGATTACTTGGGGGCCGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GCTCCCTTCTCTGCCCCTCCTATATTAAGAGTAAGGAAATATGCTCCACACAAAGAACTCGAAGGCTTGTaGGAACTGCTGAGTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: APFSAPPILRVRKYAPHKELEGL*ELLSQV Trigger: CACCTGACTCAGCAGTTCCCACAAGCCTTCGAGTTC...TTTGTGTGGAGCATATTTCCTTACTCTTAATATAGGAGGGGCAGAGAAGGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | CTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGAAGCCTGACAATGGCTaGCTACATCGACAAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLPTYVLYVTQDVFCVSMKPDNG*LHRQMA Trigger: TGCCATTTGTCGATGTAGTCAGCCATTGTCAGGCTT...CATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | AACAATGAGCCTATAAAGCAAAATAAACCTTTTCCTGCGTCAAAGCTGCTTCTGCTAGGCACCTGGCACTaGAGCCTGACAATGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: NNEPIKQNKPFPASKLLLLGTWH*SLTMAD Trigger: GTCAGCCATTGTCAGGCTTCAGTGCCAGGTGCCTAG...CAGAAGCAGCTTTGACGCAGGAAAAGGTTTATTTTGCTTTATAGGCTCATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GCTCCCTTCTCTGCCCCTCCTATATTAAGAGTAAGGAAATATGCTCCACACAAAGTGGGCATCCAGAAGTaGTCAGAGCAAGTTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: APFSAPPILRVRKYAPHKVGIQK*SEQVSP Trigger: TGGAGAAACTTGCTCTGACCACTTCTGGATGCCCAC...TTTGTGTGGAGCATATTTCCTTACTCTTAATATAGGAGGGGCAGAGAAGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GTGCGGCCCCCAAGTAATCAGAGTGCAGTTAGTTCTTCATATGAAATAAGGCTGCACCCATCGGAACAGTaGACCAACACACTTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: VRPPSNQSAVSSSYEIRLHPSEQ*TNTLAF Trigger: AAATGCAAGTGTGTTGGTCCACTGTTCCGATGGGTG...CAGCCTTATTTCATATGAAGAACTAACTGCACTCTGATTACTTGGGGGCCGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTACTGAAGTTCTTGCACTaGATCACAAGTGGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: FANVCPVRHSGCFLCEHVLKFLH*ITSGHP Trigger: TGGATGCCCACTTGTGATTCAGTGCAAGAACTTCAG...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GATCCTTTTCTCAGCTACCTACTTTCTCACTTACTGCTAAGCCCCAAAGTCACTCATGTAGCGGTTTCCTaGGTTGGCTTTACTAATGGC | + |
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Preference number: 4 (lower is better) Translates to: DPFLSYLLSHLLLSPKVTHVAVS*VGFTNG Trigger: GCCATTAGTAAAGCCAACCCAGGAAACCGCTACATG...AGTGACTTTGGGGCTTAGCAGTAAGTGAGAAAGTAGGTAGCTGAGAAAAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GTATGTCTACAACTTTCCATGGTGGAGCACTGCAGTGTGCGGCCCCCAAGTAATTCAGTCTCTGAGATTTaGAACTGTAGAGAGGATTTA | + |
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Preference number: 4 (lower is better) Translates to: VCLQLSMVEHCSVRPPSNSVSEI*NCREDL Trigger: TAAATCCTCTCTACAGTTCCAAATCTCAGAGACTGA...ATTACTTGGGGGCCGCACACTGCAGTGCTCCACCATGGAAAGTTGTAGACATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | ACTGTCAGCTGCAGCTTGGAACAAATGACAACGAGAACAAAGCCTTCGGTAACAAGCGTCCGATCAAACTaGTGGTACATGTTTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TVSCSLEQMTTRTKPSVTSVRSN*WYMFLQ Trigger: TTGGAGAAACATGTACCACCAGTTTGATCGGACGCT...TGTTACCGAAGGCTTTGTTCTCGTTGTCATTTGTTCCAAGCTGCAGCTGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | CCTATAAAGCAAAATAAACCTTTTCCTGCGTCAAAGCTGCTTCTGTTGGACATTACTCCAAGAACTGAGTaGACACTGGTGAGACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PIKQNKPFPASKLLLLDITPRTE*TLVRPP Trigger: GGGAGGTCTCACCAGTGTTCACTCAGTTCTTGGAGT...AATGTCCAACAGAAGCAGCTTTGACGCAGGAAAAGGTTTATTTTGCTTTATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR GCA 90 bp | ATGAGACATTTACACAGACTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATTGCTCTGTTAGCTATTaGATTGAGCTTGGGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: MRHLHRLLPTYVLYVTQDCSVSY*IELGPG Trigger: ACCAGGCCCAAGCTCAATGCAATAGCTAACAGAGCA...ATCCTGAGTGACGTACAGGACATACGTTGGCAAAAGTCTGTGTAAATGTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR GCA 90 bp | ACTGTCAGCTGCAGCTTGGAACAAATGACAACGAGAACAAAGCCTTCGGTAACATCTCCTTCTGACAGTTaGCAAGGAAGTTCCCAAATT | + |
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Preference number: 4 (lower is better) Translates to: TVSCSLEQMTTRTKPSVTSPSDS*QGSSQI Trigger: AATTTGGGAACTTCCTTGGCAACTGTCAGAAGGAGA...TGTTACCGAAGGCTTTGTTCTCGTTGTCATTTGTTCCAAGCTGCAGCTGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | CTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGACAGAGGCAATATGGTaGTGTAGTATCCAGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLPTYVLYVTQDVFCVSMTEAIW*CSIQVS Trigger: AGAAACCTGGATACTACACCACCATATTGCCTCTGT...CATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | GATCCTTTTCTCAGCTACCTACTTTCTCACTTACTGCTAAGCCCCAAAGTCACTGAACATACAGCTCTCTaGGATAAGTCTCACAGACCT | + |
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Preference number: 4 (lower is better) Translates to: DPFLSYLLSHLLLSPKVTEHTAL*DKSHRP Trigger: AGGTCTGTGAGACTTATCCCAGAGAGCTGTATGTTC...AGTGACTTTGGGGCTTAGCAGTAAGTGAGAAAGTAGGTAGCTGAGAAAAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR CCA 90 bp | ATGAGACATTTACACAGACTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATGGGTCTCCATCCAAATaGCCACACCTCTCTGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: MRHLHRLLPTYVLYVTQDGSPSK*PHLSEN Trigger: ATTTTCAGAGAGGTGTGGCCATTTGGATGGAGACCC...ATCCTGAGTGACGTACAGGACATACGTTGGCAAAAGTCTGTGTAAATGTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | GCTCCCTTCTCTGCCCCTCCTATATTAAGAGTAAGGAAATATGCTCCACACAAAGCTTTACTAATGGCTTaGAGCAAATGCTCATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: APFSAPPILRVRKYAPHKALLMA*SKCSSS Trigger: AGAGGATGAGCATTTGCTTCAAGCCATTAGTAAAGC...TTTGTGTGGAGCATATTTCCTTACTCTTAATATAGGAGGGGCAGAGAAGGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | GATCCTTTTCTCAGCTACCTACTTTCTCACTTACTGCTAAGCCCCAAAGTCACTACTTCCAGTAATTTCTaGAGGCTGGATCTCATGACA | + |
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Preference number: 4 (lower is better) Translates to: DPFLSYLLSHLLLSPKVTTSSNF*RLDLMT Trigger: TGTCATGAGATCCAGCCTTCAGAAATTACTGGAAGT...AGTGACTTTGGGGCTTAGCAGTAAGTGAGAAAGTAGGTAGCTGAGAAAAGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | ATGAGACATTTACACAGACTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATCAGAGTAGAAATCATTaGCAGAAAGCCCCTTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: MRHLHRLLPTYVLYVTQDQSRNH*QKAPCY Trigger: GTAGCAAGGGGCTTTCTGTCAATGATTTCTACTCTG...ATCCTGAGTGACGTACAGGACATACGTTGGCAAAAGTCTGTGTAAATGTCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | TGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATATGGCGAAGCCATCCTaGACTTTCCAAACCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: CPCVQTILTTIHFLHYSHMAKPS*TFQTRV Trigger: TACTCTGGTTTGGAAAGTTCAGGATGGCTTCGCCAT...ATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
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| CDS-3UTR TCA 90 bp | CCTATAAAGCAAAATAAACCTTTTCCTGCGTCAAAGCTGCTTCTGTTGGACATTCATCCAAAACAGCCTTaGTATGGCGAAGCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIKQNKPFPASKLLLLDIHPKQP*YGEAIL Trigger: CAGGATGGCTTCGCCATATCAAGGCTGTTTTGGATG...AATGTCCAACAGAAGCAGCTTTGACGCAGGAAAAGGTTTATTTTGCTTTATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAGTTCCCAAATTGGCATaGATGAATGTGCTCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FANVCPVRHSGCFLCEHVVPKLA*MNVLMD Trigger: ATCCATGAGCACATTCATTCATGCCAATTTGGGAAC...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAGTGGACCAACACACTTaGATTTTCAACCACTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FANVCPVRHSGCFLCEHVVDQHT*IFNHYC Trigger: GCAATAGTGGTTGAAAATGCAAGTGTGTTGGTCCAC...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR TCA 90 bp | GTGCGGCCCCCAAGTAATCAGAGTGCAGTTAGTTCTTCATATGAAATAAGGCTGCTGGATCTCATGACATaGATATTTTCTATTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: VRPPSNQSAVSSSYEIRLLDLMT*IFSIPT Trigger: CGTTGGAATAGAAAATATTCATGTCATGAGATCCAG...CAGCCTTATTTCATATGAAGAACTAACTGCACTCTGATTACTTGGGGGCCGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR GCA 90 bp | GTGCGGCCCCCAAGTAATCAGAGTGCAGTTAGTTCTTCATATGAAATAAGGCTGATAACCTTTTCCAGCTaGTCTGTTAGCTATTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VRPPSNQSAVSSSYEIRLITFSS*SVSYCI Trigger: AATGCAATAGCTAACAGAGCAGCTGGAAAAGGTTAT...CAGCCTTATTTCATATGAAGAACTAACTGCACTCTGATTACTTGGGGGCCGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAATGTCTTCCTCTAACTaGTTGCTTTGCTCATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FANVCPVRHSGCFLCEHVMSSSN*LLCSFI Trigger: TATGAATGAGCAAAGCAAGCAGTTAGAGGAAGACAT...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTTCTCTGCCCCTCCTATATTAAGAGTAAGGAAATATGCTCCACACAAAATGCCATTTTTGCATTaGTTAATTTTAGCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: APFSAPPILRVRKYAPHKMPFLH*LILASR Trigger: CCTCGAGGCTAAAATTAAGCAATGCAAAAATGGCAT...TTTGTGTGGAGCATATTTCCTTACTCTTAATATAGGAGGGGCAGAGAAGGGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATAAAACAGCCTTGATATaGCGAAGCCATCCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CPCVQTILTTIHFLHYSHKTALI*RSHPEL Trigger: AAGTTCAGGATGGCTTCGCCATATCAAGGCTGTTTT...ATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR TCA 90 bp | GTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATCCAGGGACAGGTTTCTTTTTGCTaGGCGTCAATAAATAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYRPSSQLYISYTTVIQGQVSFC*ASINNR Trigger: CCTATTATTTATTGACGCTCAGCAAAAAGAAACCTG...TCCCTGGATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATCAACCACTATTGCTTTaGCTAAGAAGATTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPCVQTILTTIHFLHYSHQPLLL*LRRLQH Trigger: ATGCTGCAATCTTCTTAGCCAAAGCAATAGTGGTTG...ATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CCA 90 bp | AACAATGAGCCTATAAAGCAAAATAAACCTTTTCCTGCGTCAAAGCTGCTTCTGGTCCGATCAAACTGGTaGTACATGTTTCTCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NNEPIKQNKPFPASKLLLVRSNW*YMFLQN Trigger: GTTTTGGAGAAACATGTACCACCAGTTTGATCGGAC...CAGAAGCAGCTTTGACGCAGGAAAAGGTTTATTTTGCTTTATAGGCTCATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATCAGTATCATTTTGCTTaGGATTATAAGAGAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPCVQTILTTIHFLHYSHQYHFA*DYKRRH Trigger: ATGCCTTCTCTTATAATCCCAAGCAAAATGATACTG...ATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS GCA 90 bp | TGGCAGCCTCAGTGCCCTGCCGGCAGTAGGATAGGACCGGAAGTCTaGCCTTGCTCCGGAAGTTGGAACTGCCCACGATCACCGGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: WQPQCPAGSRIGPEV*PCSGSWNCPRSPAG Trigger: GCCGGCCGGTGATCGTGGGCAGTTCCAACTTCCGGAGCAAGGGCAGACTTCCGGTCCTATCCTACTGCCGGCAGGGCACTGAGGCTGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS TCA 90 bp | GTGGGAACTGCTGAGTCAGGTGCCAGACACACTCCAAGAACTGAGTaGACACTGGTGAGACCTCCCTCGGGTCTCCATCCAAATGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGTAESGARHTPRTE*TLVRPPSGLHPNGH Trigger: GTGGCCATTTGGATGGAGACCCGAGGGAGGTCTCACCAGTGTTCACTCAGTTCTTGGAGTGTGTCTGGCACCTGACTCAGCAGTTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS GCA 90 bp | CTCACAGACCTTGTACTCTCGGTTGGCATCCGACAGTTGCCAGTTTaGATTGGGCACTCCCATCCTCTCATACTCCGCAGCAAGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTDLVLSVGIRQLPV*IGHSHPLILRSKVN Trigger: ATTGACCTTGCTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGGTCTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS GCA 90 bp | CTCCGACTTAGAAAATTCCTCGGCATAGTCACAGTAGCGATTATCTaGTGGGCTGCTGCCCTCTATAGCTCGGAGTGTGTCCTTCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLRKFLGIVTVAII*WAAALYSSECVLHG Trigger: CCCGTGAAGGACACACTCCGAGCTATAGAGGGCAGCAGCCCAGCAGATAATCGCTACTGTGACTATGCCGAGGAATTTTCTAAGTCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS-3UTR CAA 90 bp | GTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATCCAGGGAGCCGAGGGAGCACACTaGGGAGGTCCTGTCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VYRPSSQLYISYTTVIQGAEGAH*GGPVPP Trigger: GGGTGGGACAGGACCTCCCAAGTGTGCTCCCTCGGC...TCCCTGGATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS CCA 90 bp | CATACAGCTCTCTGGGATAAGTCTCACAGACCTTGTACTCTCGGTTaGCATCCGACAGTTGCCAGTTTGCATTGGGCACTCCCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTALWDKSHRPCTLG*HPTVASLHWALPSS Trigger: AGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGGTCTGTGAGACTTATCCCAGAGAGCTGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS CCA 90 bp | CGACTTAGAAAATTCCTCGGCATAGTCACAGTAGCGATTATCTGCTaGGCTGCTGCCCTCTATAGCTCGGAGTGTGTCCTTCACGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLRKFLGIVTVAIIC*AAALYSSECVLHGK Trigger: CTTCCCGTGAAGGACACACTCCGAGCTATAGAGGGCAGCAGCCCAGCAGATAATCGCTACTGTGACTATGCCGAGGAATTTTCTAAGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS CCA 90 bp | GGCTCTTTGAGACACAGCGAGGTTTTCAGGGCAGGTGATTCAGGGTaGACAGCATGCAGCAACTCCTTCGTTAGGATGCCATTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSLRHSEVFRAGDSG*TACSNSFVRMPFLH Trigger: ATGCAAAAATGGCATCCTAACGAAGGAGTTGCTGCATGCTGTCCACCCTGAATCACCTGCCCTGAAAACCTCGCTGTGTCTCAAAGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS CCA 90 bp | TGTCCTTTTGTGTATCCCACCAGCTCTGCATGCGATGCTTGGGCCTaGTATCCACAACATACATGTAGCGGTTTCCTGGGTTGGCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CPFVYPTSSACDAWA*YPQHTCSGFLGWLY Trigger: GTAAAGCCAACCCAGGAAACCGCTACATGTATGTTGTGGATACCAGGCCCAAGCATCGCATGCAGAGCTGGTGGGATACACAAAAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224366.2 |
||
| CDS TCA 90 bp | GGCATGAATGAATGTGCTCATGGATCTGAAGAAGAAACGCTTCGTTaGACTCGAAGGCTTGTGGGAACTGCTGAGTCAGGTGCCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GMNECAHGSEEETLR*TRRLVGTAESGARH Trigger: GTGTCTGGCACCTGACTCAGCAGTTCCCACAAGCCTTCGAGTTCAACGAAGCGTTTCTTCTTCAGATCCATGAGCACATTCATTCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS CCA 90 bp | CTCATGGATCTGAAGAAGAAACGCTTCGTTGAACTCGAAGGCTTGTaGGAACTGCTGAGTCAGGTGCCAGACACACTCCAAGAACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LMDLKKKRFVELEGL*ELLSQVPDTLQELS Trigger: ACTCAGTTCTTGGAGTGTGTCTGGCACCTGACTCAGCAGTTCCCACAAGCCTTCGAGTTCAACGAAGCGTTTCTTCTTCAGATCCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS-3UTR CAA 90 bp | GTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATCCAGGGACCCTTGCTCCGGAAGTaGGAACTGCCCACGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: VYRPSSQLYISYTTVIQGPLLRK*ELPTIT Trigger: GGTGATCGTGGGCAGTTCCAACTTCCGGAGCAAGGG...TCCCTGGATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CAA 90 bp | TCAACAACCCCTCCTGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTGTTGAACTCGAAGGCTaGTGGGAACTGCTGAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: STTPPAHVYRPSSQLYISVELEG*WELLSQ Trigger: CTGACTCAGCAGTTCCCACAAGCCTTCGAGTTCAAC...AGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCAGGAGGGGTTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS GCA 90 bp | AGACACAGCGAGGTTTTCAGGGCAGGTGATTCAGGGTGGACAGCATaGAGCAACTCCTTCGTTAGGATGCCATTTTTGCATTGCTTAATT | + |
|
Preference number: 5 (lower is better) Translates to: RHSEVFRAGDSGWTA*SNSFVRMPFLHCLI Trigger: AATTAAGCAATGCAAAAATGGCATCCTAACGAAGGAGTTGCTGCATGCTGTCCACCCTGAATCACCTGCCCTGAAAACCTCGCTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAGCTGCAGCTTGGAACAAATGACAACGAGAACAAAGCCTTCGGTAACAGCATCCAAAACAGCCTaGATATGGCGAAGCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: TVSCSLEQMTTRTKPSVTASKTA*IWRSHP Trigger: AGGATGGCTTCGCCATATCAAGGCTGTTTTGGATGC...TGTTACCGAAGGCTTTGTTCTCGTTGTCATTTGTTCCAAGCTGCAGCTGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CAA 90 bp | GTATGTCTACAACTTTCCATGGTGGAGCACTGCAGTGTGCGGCCCCCAAGTAATTCAACCACTATTGCTTaGGCTAAGAAGATTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCLQLSMVEHCSVRPPSNSTTIA*AKKIAA Trigger: TGCTGCAATCTTCTTAGCCAAAGCAATAGTGGTTGA...ATTACTTGGGGGCCGCACACTGCAGTGCTCCACCATGGAAAGTTGTAGACATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGAGAAGAAACGCTTCGTaGAACTCGAAGGCTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPTYVLYVTQDVFCVSMRRNAS*NSKACG Trigger: CCCACAAGCCTTCGAGTTCAACGAAGCGTTTCTTCT...CATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS TCA 90 bp | CTTTCCCTGGGAACAATGAAATGCACAATCCTGAAGTTCTTGCACTaGATCACAAGTGGGCATCCAGAAGTGGTCAGAGCAAGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLGTMKCTILKFLH*ITSGHPEVVRASFS Trigger: GGAGAAACTTGCTCTGACCACTTCTGGATGCCCACTTGTGATTCAGTGCAAGAACTTCAGGATTGTGCATTTCATTGTTCCCAGGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTTTACTTGTTCAACCTaGGTTGTCCGGATGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPTYVLYVTQDVFCVSMFTCST*VVRMCS Trigger: GGAGCACATCCGGACAACCAAGGTTGAACAAGTAAA...CATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCAAGTTGCCAGTTTGCATaGGGCACTCCCATCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPMCTDHPHNYTFLTLQSSCQFA*GTPILS Trigger: TGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACT...TGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS GCA 90 bp | TGCTTGCTTTGCTCATTCATATTCATAATTATGCTCAGCACAGACTaGCGAGGATGGAGCGTCCGATCAAACTGGTGGTACATGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLCSFIFIIMLSTD*RGWSVRSNWWYMFL Trigger: GAGAAACATGTACCACCAGTTTGATCGGACGCTCCATCCTCGGCAGTCTGTGCTGAGCATAATTATGAATATGAATGAGCAAAGCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAGCTGCAGCTTGGAACAAATGACAACGAGAACAAAGCCTTCGGTAACAGGCTTTACTAATGGCTaGAAGCAAATGCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TVSCSLEQMTTRTKPSVTGFTNG*KQMLIL Trigger: GAGGATGAGCATTTGCTTCAAGCCATTAGTAAAGCC...TGTTACCGAAGGCTTTGTTCTCGTTGTCATTTGTTCCAAGCTGCAGCTGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS TCA 90 bp | GAAGATTGCAGCATCCAAAACAGCCTTGATATGGCGAAGCCATCCTaGACTTTCCAAACCAGAGTAGAAATCATTGACAGAAAGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDCSIQNSLDMAKPS*TFQTRVEIIDRKPL Trigger: AAGGGGCTTTCTGTCAATGATTTCTACTCTGGTTTGGAAAGTTCAGGATGGCTTCGCCATATCAAGGCTGTTTTGGATGCTGCAATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS CCA 90 bp | AACAATGAAATGCACAATCCTGAAGTTCTTGCACTGAATCACAAGTaGGCATCCAGAAGTGGTCAGAGCAAGTTTCTCCACAGAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: NNEMHNPEVLALNHK*ASRSGQSKFLHRGN Trigger: ATTGCCTCTGTGGAGAAACTTGCTCTGACCACTTCTGGATGCCCACTTGTGATTCAGTGCAAGAACTTCAGGATTGTGCATTTCATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS TCA 90 bp | CCACTATTGCTTTGGCTAAGAAGATTGCAGCATCCAAAACAGCCTTaGTATGGCGAAGCCATCCTGAACTTTCCAAACCAGAGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLWLRRLQHPKQP*YGEAILNFPNQSRN Trigger: ATTTCTACTCTGGTTTGGAAAGTTCAGGATGGCTTCGCCATATCAAGGCTGTTTTGGATGCTGCAATCTTCTTAGCCAAAGCAATAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS GCA 90 bp | TGGACAGCATGCAGCAACTCCTTCGTTAGGATGCCATTTTTGCATTaGTTAATTTTAGCCTCGAGGTCTTTAATGTCTTCCTCTAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WTACSNSFVRMPFLH*LILASRSLMSSSNC Trigger: GCAGTTAGAGGAAGACATTAAAGACCTCGAGGCTAAAATTAAGCAATGCAAAAATGGCATCCTAACGAAGGAGTTGCTGCATGCTGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS CCA 90 bp | TGCTCATTCATATTCATAATTATGCTCAGCACAGACTGCCGAGGATaGAGCGTCCGATCAAACTGGTGGTACATGTTTCTCCAAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSFIFIIMLSTDCRG*SVRSNWWYMFLQNL Trigger: TAAGTTTTGGAGAAACATGTACCACCAGTTTGATCGGACGCTCCATCCTCGGCAGTCTGTGCTGAGCATAATTATGAATATGAATGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS-3UTR CAA 90 bp | TCAACAACCCCTCCTGCCCATGTGTACAGACCATCCTCACAACTATACATTTCTCATATTTTGCTTGTTTaGATAGCTGCAGGAGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STTPPAHVYRPSSQLYISHILLV*IAAGES Trigger: ACTCTCTCCTGCAGCTATCAAAACAAGCAAAATATG...AGAAATGTATAGTTGTGAGGATGGTCTGTACACATGGGCAGGAGGGGTTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CAA 90 bp | GTGTACAGACCATCCTCACAACTATACATTTCTTACACTACAGTCATCCAGGGAAGTGGACCAACACACTaGCATTTTCAACCACTATTG | + |
|
Preference number: 5 (lower is better) Translates to: VYRPSSQLYISYTTVIQGSGPTH*HFQPLL Trigger: CAATAGTGGTTGAAAATGCAAGTGTGTTGGTCCACT...TCCCTGGATGACTGTAGTGTAAGAAATGTATAGTTGTGAGGATGGTCTGTACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAACGTATGTCCTGTACGTCACTCAGGATGTTTTCTGTGTGAGCATGTAGATGCCATTTTTGCATaGCTTAATTTTAGCCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FANVCPVRHSGCFLCEHVDAIFA*LNFSLE Trigger: CTCGAGGCTAAAATTAAGCAATGCAAAAATGGCATC...TACATGCTCACACAGAAAACATCCTGAGTGACGTACAGGACATACGTTGGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022563.9 |
||
| CDS GCA 90 bp | ATTTTAGCCTCGAGGTCTTTAATGTCTTCCTCTAACTGCTTGCTTTaGTCATTCATATTCATAATTATGCTCAGCACAGACTGCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILASRSLMSSSNCLL*SFIFIIMLSTDCRG Trigger: TCCTCGGCAGTCTGTGCTGAGCATAATTATGAATATGAATGAGCAAAGCAAGCAGTTAGAGGAAGACATTAAAGACCTCGAGGCTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS GCA 90 bp | CATTGCTTAATTTTAGCCTCGAGGTCTTTAATGTCTTCCTCTAACTaGTTGCTTTGCTCATTCATATTCATAATTATGCTCAGCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HCLILASRSLMSSSN*LLCSFIFIIMLSTD Trigger: GTCTGTGCTGAGCATAATTATGAATATGAATGAGCAAAGCAAGCAGTTAGAGGAAGACATTAAAGACCTCGAGGCTAAAATTAAGCAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
||
| CDS GCA 72 bp | CAGTGCCCTGCCGGCAGTAGGATAGGACCGGAAGTCTaGCCTTGCTCCGGAAGTTGGAACTGCCCACGATCA | + |
|
Preference number: 6 (lower is better) Translates to: QCPAGSRIGPEV*PCSGSWNCPRS Trigger: TGATCGTGGGCAGTTCCAACTTCCGGAGCAAGGGCAGACTTCCGGTCCTATCCTACTGCCGGCAGGGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS TCA 72 bp | GCTGAGTCAGGTGCCAGACACACTCCAAGAACTGAGTaGACACTGGTGAGACCTCCCTCGGGTCTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: AESGARHTPRTE*TLVRPPSGLHP Trigger: TGGATGGAGACCCGAGGGAGGTCTCACCAGTGTTCACTCAGTTCTTGGAGTGTGTCTGGCACCTGACTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS TCA 72 bp | GTGCCAGACACACTCCAAGAACTGAGTGAACACTGGTaGGACCTCCCTCGGGTCTCCATCCAAATGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: VPDTLQELSEHW*DLPRVSIQMAT Trigger: TGTGGCCATTTGGATGGAGACCCGAGGGAGGTCTCACCAGTGTTCACTCAGTTCTTGGAGTGTGTCTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS TCA 72 bp | CGGCTCTTTGAGACACAGCGAGGTTTTCAGGGCAGGTaGTTCAGGGTGGACAGCATGCAGCAACTCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: RLFETQRGFQGR*FRVDSMQQLLR Trigger: ACGAAGGAGTTGCTGCATGCTGTCCACCCTGAATCACCTGCCCTGAAAACCTCGCTGTGTCTCAAAGAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS GCA 72 bp | CTTGTACTCTCGGTTGGCATCCGACAGTTGCCAGTTTaGATTGGGCACTCCCATCCTCTCATACTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LVLSVGIRQLPV*IGHSHPLILRS Trigger: GCTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | ACTCTCGGTTGGCATCCGACAGTTGCCAGTTTGCATTaGGCACTCCCATCCTCTCATACTCCGCAGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: TLGWHPTVASLH*ALPSSHTPQQG Trigger: ACCTTGCTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | TACTCTCGGTTGGCATCCGACAGTTGCCAGTTTGCATaGGGCACTCCCATCCTCTCATACTCCGCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: YSRLASDSCQFA*GTPILSYSAAR Trigger: CCTTGCTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | CCTTGTACTCTCGGTTGGCATCCGACAGTTGCCAGTTaGCATTGGGCACTCCCATCCTCTCATACTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PCTLGWHPTVAS*HWALPSSHTPQ Trigger: CTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | GGGATAAGTCTCACAGACCTTGTACTCTCGGTTGGCATCCGACAGTaGCCAGTTTGCATTGGGCACTCCCATCCTCTCATACTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GISLTDLVLSVGIRQ*PVCIGHSHPLILRS Trigger: GCTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGGTCTGTGAGACTTATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | TCTATAGCTCGGAGTGTGTCCTTCACGGGAAGCAGACTCGGCTCTTaGAGACACAGCGAGGTTTTCAGGGCAGGTGATTCAGGGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: SIARSVSFTGSRLGS*RHSEVFRAGDSGWT Trigger: TGTCCACCCTGAATCACCTGCCCTGAAAACCTCGCTGTGTCTCAAAGAGCCGAGTCTGCTTCCCGTGAAGGACACACTCCGAGCTATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | AGACACAGCGAGGTTTTCAGGGCAGGTGATTCAGGGTaGACAGCATGCAGCAACTCCTTCGTTAGGATGCCA | + |
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Preference number: 6 (lower is better) Translates to: RHSEVFRAGDSG*TACSNSFVRMP Trigger: TGGCATCCTAACGAAGGAGTTGCTGCATGCTGTCCACCCTGAATCACCTGCCCTGAAAACCTCGCTGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | GTGTATCCCACCAGCTCTGCATGCGATGCTTGGGCCTaGTATCCACAACATACATGTAGCGGTTTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: VYPTSSACDAWA*YPQHTCSGFLG Trigger: ACCCAGGAAACCGCTACATGTATGTTGTGGATACCAGGCCCAAGCATCGCATGCAGAGCTGGTGGGATACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224366.2 |
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| CDS CAA 90 bp | CAGACCTTGTACTCTCGGTTGGCATCCGACAGTTGCCAGTTTGCATaGGGCACTCCCATCCTCTCATACTCCGCAGCAAGGTCAATAAGC | + |
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Preference number: 6 (lower is better) Translates to: QTLYSRLASDSCQFA*GTPILSYSAARSIS Trigger: GCTTATTGACCTTGCTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | TCTCACAGACCTTGTACTCTCGGTTGGCATCCGACAGTTGCCAGTTaGCATTGGGCACTCCCATCCTCTCATACTCCGCAGCAAGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SHRPCTLGWHPTVAS*HWALPSSHTPQQGQ Trigger: TTGACCTTGCTGCGGAGTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGGTCTGTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS GCA 72 bp | TCACAGACCTTGTACTCTCGGTTGGCATCCGACAGTTaGCAGTTTGCATTGGGCACTCCCATCCTCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: SQTLYSRLASDS*QFALGTPILSY Trigger: GTATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGGTCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | CTCACAGACCTTGTACTCTCGGTTGGCATCCGACAGTaGCCAGTTTGCATTGGGCACTCCCATCCTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: LTDLVLSVGIRQ*PVCIGHSHPLI Trigger: TATGAGAGGATGGGAGTGCCCAATGCAAACTGGCAACTGTCGGATGCCAACCGAGAGTACAAGGTCTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | GTGCTCATGGATCTGAAGAAGAAACGCTTCGTTGAACTCGAAGGCTaGTGGGAACTGCTGAGTCAGGTGCCAGACACACTCCAAGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: VLMDLKKKRFVELEG*WELLSQVPDTLQEL Trigger: CAGTTCTTGGAGTGTGTCTGGCACCTGACTCAGCAGTTCCCACAAGCCTTCGAGTTCAACGAAGCGTTTCTTCTTCAGATCCATGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | CTGAAGAAGAAACGCTTCGTTGAACTCGAAGGCTTGTaGGAACTGCTGAGTCAGGTGCCAGACACACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LKKKRFVELEGL*ELLSQVPDTLQ Trigger: TTGGAGTGTGTCTGGCACCTGACTCAGCAGTTCCCACAAGCCTTCGAGTTCAACGAAGCGTTTCTTCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | AAATTCCTCGGCATAGTCACAGTAGCGATTATCTGCTaGGCTGCTGCCCTCTATAGCTCGGAGTGTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: KFLGIVTVAIIC*AAALYSSECVL Trigger: AAGGACACACTCCGAGCTATAGAGGGCAGCAGCCCAGCAGATAATCGCTACTGTGACTATGCCGAGGAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | GATCTGAAGAAGAAACGCTTCGTTGAACTCGAAGGCTaGTGGGAACTGCTGAGTCAGGTGCCAGACACACTC | + |
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Preference number: 6 (lower is better) Translates to: DLKKKRFVELEG*WELLSQVPDTL Trigger: GAGTGTGTCTGGCACCTGACTCAGCAGTTCCCACAAGCCTTCGAGTTCAACGAAGCGTTTCTTCTTCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS GCA 72 bp | GAGGTTTTCAGGGCAGGTGATTCAGGGTGGACAGCATaGAGCAACTCCTTCGTTAGGATGCCATTTTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: EVFRAGDSGWTA*SNSFVRMPFLH Trigger: ATGCAAAAATGGCATCCTAACGAAGGAGTTGCTGCATGCTGTCCACCCTGAATCACCTGCCCTGAAAACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS GCA 72 bp | TGCCAATGTCCTTTTGTGTATCCCACCAGCTCTGCATaGGATGCTTGGGCCTGGTATCCACAACATACATGT | + |
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Preference number: 6 (lower is better) Translates to: CQCPFVYPTSSA*DAWAWYPQHTC Trigger: ACATGTATGTTGTGGATACCAGGCCCAAGCATCGCATGCAGAGCTGGTGGGATACACAAAAGGACATTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224366.2 |
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| CDS GCA 72 bp | ATTCTGCCAATGTCCTTTTGTGTATCCCACCAGCTCTaGATGCGATGCTTGGGCCTGGTATCCACAACATAC | + |
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Preference number: 6 (lower is better) Translates to: ILPMSFCVSHQL*MRCLGLVSTTY Trigger: GTATGTTGTGGATACCAGGCCCAAGCATCGCATGCAGAGCTGGTGGGATACACAAAAGGACATTGGCAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224366.2 |
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| CDS TCA 72 bp | GAATGTGCTCATGGATCTGAAGAAGAAACGCTTCGTTaGACTCGAAGGCTTGTGGGAACTGCTGAGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ECAHGSEEETLR*TRRLVGTAESG Trigger: ACCTGACTCAGCAGTTCCCACAAGCCTTCGAGTTCAACGAAGCGTTTCTTCTTCAGATCCATGAGCACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | GGGCCTGGTATCCACAACATACATGTAGCGGTTTCCTaGGTTGGCTTTACTAATGGCTTGAAGCAAATGCTC | + |
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Preference number: 6 (lower is better) Translates to: GPGIHNIHVAVS*VGFTNGLKQML Trigger: GAGCATTTGCTTCAAGCCATTAGTAAAGCCAACCCAGGAAACCGCTACATGTATGTTGTGGATACCAGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS GCA 72 bp | TGCTCATTCATATTCATAATTATGCTCAGCACAGACTaGCGAGGATGGAGCGTCCGATCAAACTGGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: CSFIFIIMLSTD*RGWSVRSNWWY Trigger: GTACCACCAGTTTGATCGGACGCTCCATCCTCGGCAGTCTGTGCTGAGCATAATTATGAATATGAATGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | ATGCACAATCCTGAAGTTCTTGCACTGAATCACAAGTaGGCATCCAGAAGTGGTCAGAGCAAGTTTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: MHNPEVLALNHK*ASRSGQSKFLH Trigger: GTGGAGAAACTTGCTCTGACCACTTCTGGATGCCCACTTGTGATTCAGTGCAAGAACTTCAGGATTGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | TCCTGTCCCACCCATCGGAACAGTGGACCAACACACTaGCATTTTCAACCACTATTGCTTTGGCTAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SCPTHRNSGPTH*HFQPLLLWLRR Trigger: TCTTCTTAGCCAAAGCAATAGTGGTTGAAAATGCAAGTGTGTTGGTCCACTGTTCCGATGGGTGGGACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CCA 72 bp | ATATTCATAATTATGCTCAGCACAGACTGCCGAGGATaGAGCGTCCGATCAAACTGGTGGTACATGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: IFIIMLSTDCRG*SVRSNWWYMFL Trigger: GAGAAACATGTACCACCAGTTTGATCGGACGCTCCATCCTCGGCAGTCTGTGCTGAGCATAATTATGAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | GCTTTGGCTAAGAAGATTGCAGCATCCAAAACAGCCTaGATATGGCGAAGCCATCCTGAACTTTCCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: ALAKKIAASKTA*IWRSHPELSKP Trigger: TGGTTTGGAAAGTTCAGGATGGCTTCGCCATATCAAGGCTGTTTTGGATGCTGCAATCTTCTTAGCCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | TCAGGGTGGACAGCATGCAGCAACTCCTTCGTTAGGATGCCATTTTaGCATTGCTTAATTTTAGCCTCGAGGTCTTTAATGTCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SGWTACSNSFVRMPF*HCLILASRSLMSSS Trigger: AGAGGAAGACATTAAAGACCTCGAGGCTAAAATTAAGCAATGCAAAAATGGCATCCTAACGAAGGAGTTGCTGCATGCTGTCCACCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | AGGTGTGTGGCCGTAAGATACAGTGTTCCTGTCAGTGACTTGTTGTaGGTACTAAACCGGTCAAGTAACTTTACTTGTTCAACCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RCVAVRYSVPVSDLL*VLNRSSNFTCSTLV Trigger: AACCAAGGTTGAACAAGTAAAGTTACTTGACCGGTTTAGTACCAACAACAAGTCACTGACAGGAACACTGTATCTTACGGCCACACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | GTGGCCGTAAGATACAGTGTTCCTGTCAGTGACTTGTaGTTGGTACTAAACCGGTCAAGTAACTTTACTTGT | + |
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Preference number: 6 (lower is better) Translates to: VAVRYSVPVSDL*LVLNRSSNFTC Trigger: ACAAGTAAAGTTACTTGACCGGTTTAGTACCAACAACAAGTCACTGACAGGAACACTGTATCTTACGGCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | TGTGTGGCCGTAAGATACAGTGTTCCTGTCAGTGACTaGTTGTTGGTACTAAACCGGTCAAGTAACTTTACT | + |
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Preference number: 6 (lower is better) Translates to: CVAVRYSVPVSD*LLVLNRSSNFT Trigger: AGTAAAGTTACTTGACCGGTTTAGTACCAACAACAAGTCACTGACAGGAACACTGTATCTTACGGCCACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | AATAGGTGTGTGGCCGTAAGATACAGTGTTCCTGTCAGTGACTTGTaGTTGGTACTAAACCGGTCAAGTAACTTTACTTGTTCAACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NRCVAVRYSVPVSDL*LVLNRSSNFTCSTL Trigger: CAAGGTTGAACAAGTAAAGTTACTTGACCGGTTTAGTACCAACAACAAGTCACTGACAGGAACACTGTATCTTACGGCCACACACCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS TCA 72 bp | GCAATATGGTGGTGTAGTATCCAGGTTTCTTTTTGCTaGGCGTCAATAAATAATAGGTGTGTGGCCGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AIWWCSIQVSFC*ASINNRCVAVR Trigger: TCTTACGGCCACACACCTATTATTTATTGACGCTCAGCAAAAAGAAACCTGGATACTACACCACCATATTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS GCA 72 bp | TGCAGCAACTCCTTCGTTAGGATGCCATTTTTGCATTaGTTAATTTTAGCCTCGAGGTCTTTAATGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CSNSFVRMPFLH*LILASRSLMSS Trigger: GGAAGACATTAAAGACCTCGAGGCTAAAATTAAGCAATGCAAAAATGGCATCCTAACGAAGGAGTTGCTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | GCCGTAAGATACAGTGTTCCTGTCAGTGACTTGTTGTaGGTACTAAACCGGTCAAGTAACTTTACTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AVRYSVPVSDLL*VLNRSSNFTCS Trigger: TGAACAAGTAAAGTTACTTGACCGGTTTAGTACCAACAACAAGTCACTGACAGGAACACTGTATCTTACGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | ACAGCATGCAGCAACTCCTTCGTTAGGATGCCATTTTaGCATTGCTTAATTTTAGCCTCGAGGTCTTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: TACSNSFVRMPF*HCLILASRSLM Trigger: CATTAAAGACCTCGAGGCTAAAATTAAGCAATGCAAAAATGGCATCCTAACGAAGGAGTTGCTGCATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | AATAATAGGTGTGTGGCCGTAAGATACAGTGTTCCTGTCAGTGACTaGTTGTTGGTACTAAACCGGTCAAGTAACTTTACTTGTTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: NNRCVAVRYSVPVSD*LLVLNRSSNFTCST Trigger: GGTTGAACAAGTAAAGTTACTTGACCGGTTTAGTACCAACAACAAGTCACTGACAGGAACACTGTATCTTACGGCCACACACCTATTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 90 bp | TGCTTAATTTTAGCCTCGAGGTCTTTAATGTCTTCCTCTAACTGCTaGCTTTGCTCATTCATATTCATAATTATGCTCAGCACAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLILASRSLMSSSNC*LCSFIFIIMLSTDC Trigger: GCAGTCTGTGCTGAGCATAATTATGAATATGAATGAGCAAAGCAAGCAGTTAGAGGAAGACATTAAAGACCTCGAGGCTAAAATTAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | TTAGCCTCGAGGTCTTTAATGTCTTCCTCTAACTGCTaGCTTTGCTCATTCATATTCATAATTATGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LASRSLMSSSNC*LCSFIFIIMLS Trigger: GCTGAGCATAATTATGAATATGAATGAGCAAAGCAAGCAGTTAGAGGAAGACATTAAAGACCTCGAGGCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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| CDS CAA 72 bp | AAGAGAAGGCATAGAGATCTTCATATTTTGCTTGTTTaGATAGCTGCAGGAGAGAGTTATAAATATCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KRRHRDLHILLV*IAAGESYKYRG Trigger: GCCACGATATTTATAACTCTCTCCTGCAGCTATCAAAACAAGCAAAATATGAAGATCTCTATGCCTTCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022563.9 ENSMUST00000224366.2 |
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