RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTMR4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018401

Ensembl transcript IDs: ENSMUST00000092802.12, ENSMUST00000103179.10, ENSMUST00000119628.8, ENSMUST00000123105.8, ENSMUST00000134216.3, ENSMUST00000146871.8

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTGGGACCTCCAGGAGATAGAAGCTGGAGTCACCAACTCAGTGTaGAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAA +
Preference number: 1 (lower is better)
Translates to: SWDLQEIEAGVTNSV*SFQTLGLGQDHHPK
Trigger: TTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTGGTGACTCCAGCTTCTATCTCCTGGAGGTCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 90 bp ATGCACACATCTGAGCCAGAAGCCCAGAGTCTCTCTCCAAGGCCATaGAATCTGTTCACTGATGGGACAGTCCCTCAAAACAGTCACACA +
Preference number: 1 (lower is better)
Translates to: MHTSEPEAQSLSPRP*NLFTDGTVPQNSHT
Trigger: TGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGAACAGATTGCATGGCCTTGGAGAGAGACTCTGGGCTTCTGGCTCAGATGTGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR TCA 90 bp GCCAGAAGCCCAGAGTCTCTCTCCAAGGCCATGCAATCTGTTCACTaGTGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATAC +
Preference number: 1 (lower is better)
Translates to: ARSPESLSKAMQSVH*WDSPSKQSHKVDRY
Trigger: GTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGAACAGATTGCATGGCCTTGGAGAGAGACTCTGGGCTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR GCA 90 bp TTTGGCCACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATaGACACATCTGAGCCAGAAGCCCAGAGTCTCTCTCCAAGGCCAT +
Preference number: 1 (lower is better)
Translates to: FGHIMSLTPTTALKG*THLSQKPRVSLQGH
Trigger: ATGGCCTTGGAGAGAGACTCTGGGCTTCTGGCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR TCA 90 bp AGCCTTTCTATTGCTGTTTGGGCACTGTGCACCAGGCAGTATTTATaGATCATCTTGGGACCTCCAGGAGATAGAAGCTGGAGTCACCAA +
Preference number: 1 (lower is better)
Translates to: SLSIAVWALCTRQYL*IILGPPGDRSWSHQ
Trigger: TTGGTGACTCCAGCTTCTATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 90 bp AGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCAAATTCCTCTaGTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATC +
Preference number: 1 (lower is better)
Translates to: RVSPVEKAPAKFKFL*SGHMVPRRISQDGI
Trigger: GATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CCA 90 bp GCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTaGCCACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATG +
Preference number: 1 (lower is better)
Translates to: AHCMFVTTQLHSLDF*PHHVTYTHNSSKRM
Trigger: CATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR CCA 90 bp TTTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTaGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTCTA +
Preference number: 1 (lower is better)
Translates to: FLQHIACLSQRNCTV*IFGHIMSLTPTTAL
Trigger: TAGAGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR TCA 90 bp GAGAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATaGTCTGCTCTCTTCAAGGTAGAGGAGAGATGGGTCTCACTATCA +
Preference number: 1 (lower is better)
Translates to: ESSTQIGWEFLSHIL*SALFKVEERWVSLS
Trigger: TGATAGTGAGACCCATCTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 90 bp GGTCTCACTATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTaGTGTTTGGGCACTGTGCACCAGGCAGTATTTATGAATCATCTT +
Preference number: 1 (lower is better)
Translates to: GLTITWSLVISKPFY*CLGTVHQAVFMNHL
Trigger: AAGATGATTCATAAATACTGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGATAGTGAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 90 bp TTGGTATCAAGGCTTTCTTCCTTCTGTTTGGGTTCCATTGTTAAGTaGACAGAAATAGACAGCAGCATTTGTACTGAAACCCTCACATAC +
Preference number: 1 (lower is better)
Translates to: LVSRLSSFCLGSIVK*TEIDSSICTETLTY
Trigger: GTATGTGAGGGTTTCAGTACAAATGCTGCTGTCTATTTCTGTGCACTTAACAATGGAACCCAAACAGAAGGAAGAAAGCCTTGATACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR GCA 90 bp TGTATTGAGTTTTTACAGCACATTGCATGTTTGTCACAACGCAACTaGACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACA +
Preference number: 1 (lower is better)
Translates to: CIEFLQHIACLSQRN*TVWIFGHIMSLTPT
Trigger: TGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAAACTCAATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAATCTGCTCCGGTCACATaGTACCAAGGAGGATTTCTC +
Preference number: 2 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQSAPVT*YQGGFL
Trigger: GAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGA...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR TCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTCTTCCAGACTACACCTaGAGCAGATCCTCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLLPDYT*SRSSLQ
Trigger: TTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAG...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR GCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATTCTCATTCTTCACAGTaGGTCCCTCAAAAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNSHSSQ*VPQKQP
Trigger: TGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGA...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR TCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGCTTCCAGACTACACCTaGAGCAGATCCTCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVLPDYT*SRSSLQ
Trigger: TTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAG...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR GCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCAGTAAGCCTTTCTATTaGTGTTTGGGCACTGTGCAC +
Preference number: 2 (lower is better)
Translates to: SLMLATEPDEKCIQASICSKPFY*CLGTVH
Trigger: GTGCACAGTGCCCAAACAGCAATAGAAAGGCTTACT...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTCTTTCTATTGCTGTTTaGGCACTGTGCACCAGGCAG +
Preference number: 2 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTALSIAV*ALCTRQ
Trigger: CTGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAG...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTAAGGGAAAGACAACATaGGGGAAGTGGGCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTAKGKTT*GKWAVE
Trigger: TTCCACTGCCCACTTCCCCCATGTTGTCTTTCCCTT...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR CAA 90 bp GTGCAAAGGGTAGGGCACAATCAGCAGAATTTCACAAGGATAATCTaGCTTTTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VQRVGHNQQNFTRII*LFPSHSSQCVPQKQ
Trigger: CTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAAAAGCAAGATTATCCTTGTGAAATTCTGCTGATTGTGCCCTACCCTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR TCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTAGTGCCTCTAAAGACTaGGCCTTCATGCACAGACAC +
Preference number: 2 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGSASKD*AFMHRH
Trigger: GTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACT...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTCCAGGAGATAGAAGCTaGAGTCACCAACTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVPGDRS*SHQLSV
Trigger: CACACTGAGTTGGTGACTCCAGCTTCTATCTCCTGG...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR TCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGCTTCCAGACTACACCTaGAGCAGATCCTCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: MGIPISYTMICSLQGRGELPDYT*SRSSLQ
Trigger: TTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAG...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR GCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTAGTAAGCCTTTCTATTaGTGTTTGGGCACTGTGCAC +
Preference number: 2 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTASKPFY*CLGTVH
Trigger: GTGCACAGTGCCCAAACAGCAATAGAAAGGCTTACT...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CCA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTGGGGGAAGTGGGCAGTaGAACAACAAAATCCTTTAT +
Preference number: 2 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSGGSGQ*NNKILY
Trigger: ATAAAGGATTTTGTTGTTCCACTGCCCACTTCCCCC...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CCA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTAGTGTTTGGTCCAAATaGACACATCCTCACTCCCAA +
Preference number: 2 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSSVWSK*THPHSQ
Trigger: TTGGGAGTGAGGATGTGTCCATTTGGACCAAACACT...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR CAA 90 bp GTTTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTaGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTCT +
Preference number: 2 (lower is better)
Translates to: VFTAHCMFVTTQLHS*DFWPHHVTYTHNSS
Trigger: AGAGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR TCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTTGCCATACCAGTCTTTaGACCAAACTCCACAGAAGA +
Preference number: 2 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVCHTSL*TKLHRR
Trigger: TCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGCA...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CAA 90 bp ACTATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTaGGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACC +
Preference number: 2 (lower is better)
Translates to: TITWSLVISKPFYCC*GTVHQAVFMNHLGT
Trigger: GGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CCA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTATTTATGAATCATCTTaGGACCTCCAGGAGATAGAA +
Preference number: 2 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECIYESS*DLQEIE
Trigger: TTCTATCTCCTGGAGGTCCCAAGATGATTCATAAAT...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR GCA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTTATCTTTTGGTTAAGTaGCACTGGTACATAGTAAGA +
Preference number: 2 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECYLLVK*HWYIVR
Trigger: TCTTACTATGTACCAGTGGCACTTAACCAAAAGATA...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGGGTCTCACTATCACTTaGAGTTTGGTTATAAGTAAG +
Preference number: 2 (lower is better)
Translates to: MGIPISYTMICSLQGRGEGLTIT*SLVISK
Trigger: CTTACTTATAACCAAACTCCAAGTGATAGTGAGACC...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CCA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTGGTCTCACTATCACTTaGAGTTTGGTTATAAGTAAG +
Preference number: 2 (lower is better)
Translates to: EFNSNRMGIPISYTMICSGLTIT*SLVISK
Trigger: CTTACTTATAACCAAACTCCAAGTGATAGTGAGACC...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAATTTATGAATCATCTTaGGACCTCCAGGAGATAGAA +
Preference number: 2 (lower is better)
Translates to: NSNRMGIPISYTMICSLQIYESS*DLQEIE
Trigger: TTCTATCTCCTGGAGGTCCCAAGATGATTCATAAAT...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CCA 72 bp GACCCAGAGGAGGCAGCGGCCAAGGGAAAGACAACATaGGGGAAGTGGGCAGTGGAACAACAAAATCCTTTA +
Preference number: 3 (lower is better)
Translates to: DPEEAAAKGKTT*GKWAVEQQNPL
Trigger: TAAAGGATTTTGTTGTTCCACTGCCCACTTCCCCCATGTTGTCTTTCCCTTGGCCGCTGCCTCCTCTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CAA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTCCTTTCTATTGCTGTTaGGGCACTGTGCACCAGGCA +
Preference number: 3 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGPFYCC*GTVHQA
Trigger: TGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGG...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR TCA 72 bp CTCCAGGAGATAGAAGCTGGAGTCACCAACTCAGTGTaGAGCTTCCAGACTCTGGGTCTAGGTCAGGACCAT +
Preference number: 3 (lower is better)
Translates to: LQEIEAGVTNSV*SFQTLGLGQDH
Trigger: ATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTGGTGACTCCAGCTTCTATCTCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CCA 72 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTaGGACCTCCAGGAGATAGAAGCTGGAGTCACCAAC +
Preference number: 3 (lower is better)
Translates to: GHCAPGSIYESS*DLQEIEAGVTN
Trigger: GTTGGTGACTCCAGCTTCTATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CAA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCCCTTTCTATTGCTGTTaGGGCACTGTGCACCAGGCA +
Preference number: 3 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSPFYCC*GTVHQA
Trigger: TGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGG...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR TCA 72 bp ATTGCTGTTTGGGCACTGTGCACCAGGCAGTATTTATaGATCATCTTGGGACCTCCAGGAGATAGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: IAVWALCTRQYL*IILGPPGDRSW
Trigger: CCAGCTTCTATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCCAAACAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR TCA 72 bp CCAGAGTCTCTCTCCAAGGCCATGCAATCTGTTCACTaGTGGGACAGTCCCTCAAAACAGTCACACAAAGTA +
Preference number: 3 (lower is better)
Translates to: PESLSKAMQSVH*WDSPSKQSHKV
Trigger: TACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGAACAGATTGCATGGCCTTGGAGAGAGACTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CAA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATCTGCCATACCAGTCTTaGAACCAAACTCCACAGAAG +
Preference number: 3 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNLPYQS*NQTPQK
Trigger: CTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGCAG...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CAA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTACTATCACTTGGAGTTaGGTTATAAGTAAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGTITWS*VISKPF
Trigger: GAAAGGCTTACTTATAACCAAACTCCAAGTGATAGT...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CAA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAACTGCCATACCAGTCTTaGAACCAAACTCCACAGAAG +
Preference number: 3 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKLPYQS*NQTPQK
Trigger: CTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGCAG...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CCA 72 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATaGTACCAAGGAGGATTTCTCAAGACGGTATCTTTG +
Preference number: 3 (lower is better)
Translates to: LLPNSNSSAPVT*YQGGFLKTVSL
Trigger: CAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CAA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTCTCAAGACGGTATCTTaGAGCTCTGTGTTCATGAGC +
Preference number: 3 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTALKTVS*SSVFMS
Trigger: GCTCATGAACACAGAGCTCAAAGATACCGTCTTGAG...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CAA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGCCTTTCTATTGCTGTTaGGGCACTGTGCACCAGGCA +
Preference number: 3 (lower is better)
Translates to: MGIPISYTMICSLQGRGEPFYCC*GTVHQA
Trigger: TGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGG...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 72 bp CCAGTAGAAAAAGCTCCTGCCAAATTCAAATTCCTCTaGTCCGGTCACATGGTACCAAGGAGGATTTCTCAA +
Preference number: 3 (lower is better)
Translates to: PVEKAPAKFKFL*SGHMVPRRISQ
Trigger: TTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAGCTTTTTCTACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CCA 72 bp ATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTaGCCACATCATGTCACTTACACCCACAACAGCTCT +
Preference number: 3 (lower is better)
Translates to: MFVTTQLHSLDF*PHHVTYTHNSS
Trigger: AGAGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CAA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTCTTTCTTCCTTCTGTTaGGGTTCCATTGTTAAGTGC +
Preference number: 3 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTALSSFC*GSIVKC
Trigger: GCACTTAACAATGGAACCCAAACAGAAGGAAGAAAG...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CAA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTTTCACAAGGATAATCTaGCTTTTCCCTTCTCATTCT +
Preference number: 3 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECFTRII*LFPSHS
Trigger: AGAATGAGAAGGGAAAAGCAAGATTATCCTTGTGAA...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR TCA 72 bp ACTCAAATAGGATGGGAATTCCTATCTCATATACTATaGTCTGCTCTCTTCAAGGTAGAGGAGAGATGGGTC +
Preference number: 3 (lower is better)
Translates to: TQIGWEFLSHIL*SALFKVEERWV
Trigger: GACCCATCTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 72 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTaGTGTTTGGGCACTGTGCACCAGGCAGTATTTATG +
Preference number: 3 (lower is better)
Translates to: ITWSLVISKPFY*CLGTVHQAVFM
Trigger: CATAAATACTGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 72 bp AATAGGATGGGAATTCCTATCTCATATACTATGATCTaGTCTCTTCAAGGTAGAGGAGAGATGGGTCTCACT +
Preference number: 3 (lower is better)
Translates to: NRMGIPISYTMI*SLQGRGEMGLT
Trigger: AGTGAGACCCATCTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 72 bp AGGCTTTCTTCCTTCTGTTTGGGTTCCATTGTTAAGTaGACAGAAATAGACAGCAGCATTTGTACTGAAACC +
Preference number: 3 (lower is better)
Translates to: RLSSFCLGSIVK*TEIDSSICTET
Trigger: GGTTTCAGTACAAATGCTGCTGTCTATTTCTGTGCACTTAACAATGGAACCCAAACAGAAGGAAGAAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR-3UTR CAA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTCAAGACGGTATCTTaGAGCTCTGTGTTCATGAGC +
Preference number: 3 (lower is better)
Translates to: EFNSNRMGIPISYTMICSLKTVS*SSVFMS
Trigger: GCTCATGAACACAGAGCTCAAAGATACCGTCTTGAG...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR-3UTR CAA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGACTATCACTTGGAGTTaGGTTATAAGTAAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: AIPVFEPNSTEDSANQLETITWS*VISKPF
Trigger: GAAAGGCTTACTTATAACCAAACTCCAAGTGATAGT...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR GCA 72 bp TTTTTACAGCACATTGCATGTTTGTCACAACGCAACTaGACAGTTTGGATTTTTGGCCACATCATGTCACTT +
Preference number: 3 (lower is better)
Translates to: FLQHIACLSQRN*TVWIFGHIMSL
Trigger: AAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTGCCAGCTCGCAGGAGTaGCCACACAGAGCACGTCCG +
Preference number: 4 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGASSQE*PHRARP
Trigger: CGGACGTGCTCTGTGTGGGCACTCCTGCGAGCTGGC...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAACCTTCAGGACTGCTGTaGCAGGGCTCCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQPSGLL*QGSRLP
Trigger: AGGCAGCCTGGAGCCCTGGCACAGCAGTCCTGAAGG...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCGCTCCAGGCTGCCTCTaGCCTCCTGAGAGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLAPGCL*PPESGY
Trigger: ATAACCACTCTCAGGAGGTCAGAGGCAGCCTGGAGC...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAATGGCACAGGTGGGTATaGTGGTCCTCCTCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQWHRWV*WSSSVS
Trigger: GCTGACCGAGGAGGACCAGCATACCCACCTGTGCCA...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAACTGGGATCTGGCATCTaGCTACACACAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQLGSGI*LHTARR
Trigger: CCTCCGGGCTGTGTGTAGCCAGATGCCAGATCCCAG...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATATGCAGGGCCCGGACATaGCACACAGGATGCAGGACC +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEICRART*HTGCRT
Trigger: GGTCCTGCATCCTGTGTGTCATGTCCGGGCCCTGCA...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAATCCACTCCCTCACCCTaGAGCACTGTGAAGGGTACC +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQSTPSP*STVKGT
Trigger: GGTACCCTTCACAGTGCTGCAGGGTGAGGGAGTGGA...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTTGTCGACATCGGATGTaGTCTCCTGGCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGCRHRM*SPGWHR
Trigger: CCTGTGCCAGCCAGGAGAGCACATCCGATGTCGACA...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCCAATGGCAGCCCCGTTaGGCAGGTGTCTGTATACCA +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLQWQPR*AGVCIP
Trigger: TGGTATACAGACACCTGCGCAACGGGGCTGCCATTG...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAACTTGAGGGCGAGATCTaGATGGAGTCTAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQLEGEI*MESRWG
Trigger: GCCCCACCTAGACTCCATGCAGATCTCGCCCTCAAG...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATACACAGGTGGGTATGCTaGTCCTCCTCGGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIHRWVC*SSSVSP
Trigger: GGGGCTGACCGAGGAGGACCAGCATACCCACCTGTG...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAATCCTCTGCATTTTCCTaGTGGCCACAGCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQSSAFS*WPQRSP
Trigger: TGGAGACCGCTGTGGCCATCAGGAAAATGCAGAGGA...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTTGCAGGGCCCGGACATaGCACACAGGATGCAGGACC +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSCRART*HTGCRT
Trigger: GGTCCTGCATCCTGTGTGTCATGTCCGGGCCCTGCA...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCGCCAGCTCGCAGGAGTaGCCACACAGAGCACGTCCG +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFASSQE*PHRARP
Trigger: CGGACGTGCTCTGTGTGGGCACTCCTGCGAGCTGGC...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGCCATACCAAGGAACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCACAGGTGGGTATGCTaGTCCTCCTCGGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SHTKEPSRLHLKQILPSNHRWVC*SSSVSP
Trigger: GGGGCTGACCGAGGAGGACCAGCATACCCACCTGTG...ATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGTTCCTTGGTATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAACCAGTTGCTGGGATCTaGCATCTGGCTACACACAGC +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQPVAGI*HLATHS
Trigger: GCTGTGTGTAGCCAGATGCCAGATCCCAGCAACTGG...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCTACCCTGCTCCTCTTaGGCTGAAGGGTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFLPCSS*AEGSGA
Trigger: GGCCCCGGACCCTTCAGCCCAAGAGGAGCAGGGTAG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCCTACCCTGCTCCTCTTaGGCTGAAGGGTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: CSLMLATEPDEKCIQASILPCSS*AEGSGA
Trigger: GGCCCCGGACCCTTCAGCCCAAGAGGAGCAGGGTAG...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTCCTGTTAGGGGGTCCTaGGGAGGCTCAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGPVRGS*GGSGKS
Trigger: TGATTTTCCTGAGCCTCCCCAGGACCCCCTAACAGG...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCCTGCCTCTGACCTCCTaGGAGTGGTTATTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLLPLTS*EWLFRL
Trigger: TAACCTGAATAACCACTCTCAGGAGGTCAGAGGCAG...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCCTCTCCGCTTGGGAATaGAGTCATCATCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLLSAWE*SHHPLE
Trigger: TTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAG...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTGGCACAGGTGGGTATaGTGGTCCTCCTCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSWHRWV*WSSSVS
Trigger: GCTGACCGAGGAGGACCAGCATACCCACCTGTGCCA...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTTGGCACAGGTGGGTATaGTGGTCCTCCTCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFWHRWV*WSSSVS
Trigger: GCTGACCGAGGAGGACCAGCATACCCACCTGTGCCA...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCCCTTCAGGACTGCTGTaGCAGGGCTCCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CSLMLATEPDEKCIQASIPSGLL*QGSRLP
Trigger: AGGCAGCCTGGAGCCCTGGCACAGCAGTCCTGAAGG...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCGTCTATGACTGTCTCTaGTCCTTCAGGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLVYDCL*SFRTAV
Trigger: CACAGCAGTCCTGAAGGAGCAGAGACAGTCATAGAC...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATACTTGAGGGCGAGATCTaGATGGAGTCTAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEILEGEI*MESRWG
Trigger: GCCCCACCTAGACTCCATGCAGATCTCGCCCTCAAG...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAACCTGGCTGGCACAGGTaGGTATGCTGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKPGWHR*VCWSSS
Trigger: CGAGGAGGACCAGCATACCCACCTGTGCCAGCCAGG...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAGGAAGCTATTCCGGATaGCGTGGATGTTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQGSYSG*RGCWPF
Trigger: GAATGGCCAACATCCACGCCATCCGGAATAGCTTCC...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGCTGGGATCTGGCATCTaGCTACACACAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQLGSGI*LHTARR
Trigger: CCTCCGGGCTGTGTGTAGCCAGATGCCAGATCCCAG...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTCTGGGATCTGGCATCTaGCTACACACAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSLGSGI*LHTARR
Trigger: CCTCCGGGCTGTGTGTAGCCAGATGCCAGATCCCAG...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAGAGGAGGTCAGTATTTaGCTCTGGAGTTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQEEVSI*LWSLAG
Trigger: GCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTC...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAACTGTGAAGGGTACCTaGAGATTCTCCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQTVKGT*RFSSSF
Trigger: GAAGGAGGAGGAGAATCTTCAGGTACCCTTCACAGT...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCAGGCAGTCTTCACTGTaGTCAGAGCCAAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLRQSSL*SEPKSS
Trigger: TGAAGACTTTGGCTCTGATCACAGTGAAGACTGCCT...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAATCAGATGTTGGCTCATaGGTTCCCTGGCACGAGATA +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQSDVGS*VPWHEI
Trigger: TATCTCGTGCCAGGGAACTCATGAGCCAACATCTGA...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTAATGAGGGCATCGGTTaGCCGGCCCAGGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLNEGIG*PAQEFH
Trigger: GTGGAATTCCTGGGCCGGGCAACCGATGCCCTCATT...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATAATGAGGGCATCGGTTaGCCGGCCCAGGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNNEGIG*PAQEFH
Trigger: GTGGAATTCCTGGGCCGGGCAACCGATGCCCTCATT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCCATCCTTGCGAGCTCTaGCTCCTGTCGACATCGGAT +
Preference number: 4 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFHPCEL*LLSTSD
Trigger: ATCCGATGTCGACAGGAGGCAGAGCTCGCAAGGATG...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGCAGTTTCTGTGGGGCTaGTGTGCTCTCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQQFLWG*CALHPR
Trigger: TCTGGGGTGGAGAGCACAGCAGCCCCACAGAAACTG...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATCAGTTTCTGTGGGGCTaGTGTGCTCTCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNQFLWG*CALHPR
Trigger: TCTGGGGTGGAGAGCACAGCAGCCCCACAGAAACTG...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCTGGCTGGCACAGGTaGGTATGCTGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSPGWHR*VCWSSS
Trigger: CGAGGAGGACCAGCATACCCACCTGTGCCAGCCAGG...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTATGTGCTCTCCTGGCTaGCACAGGTGGGTATGCTGG +
Preference number: 4 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLMCSPG*HRWVCW
Trigger: CCAGCATACCCACCTGTGCCAGCCAGGAGAGCACAT...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTATGTGCTCTCCTGGCTaGCACAGGTGGGTATGCTGG +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSMCSPG*HRWVCW
Trigger: CCAGCATACCCACCTGTGCCAGCCAGGAGAGCACAT...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATATGTGCTCTCCTGGCTaGCACAGGTGGGTATGCTGG +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNMCSPG*HRWVCW
Trigger: CCAGCATACCCACCTGTGCCAGCCAGGAGAGCACAT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTCTATTCCGGATGGCGTaGATGTTGGCCATTCCCATA +
Preference number: 4 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGLFRMA*MLAIPI
Trigger: TATGGGAATGGCCAACATCCACGCCATCCGGAATAG...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATACAGCCCGGAGGTACTaGAAGCTATTCCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNTARRY*KLFRMA
Trigger: CGCCATCCGGAATAGCTTCCAGTACCTCCGGGCTGT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCACAGCCCGGAGGTACTaGAAGCTATTCCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SLMLATEPDEKCIQASICTARRY*KLFRMA
Trigger: CGCCATCCGGAATAGCTTCCAGTACCTCCGGGCTGT...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTCAGGGCTACAATCTGTaGTGTACGGTCCCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSQGYNL*CTVPAV
Trigger: GACGGCTGGGACCGTACACCACAGATTGTAGCCCTG...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTCTGGCTCTGAGCCACTaGGGAAAGGTAAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGLALSH*GKVKIH
Trigger: ATGGATCTTTACCTTTCCCCAGTGGCTCAGAGCCAG...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCCCTGTTAGGGGGTCCTaGGGAGGCTCAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFPVRGS*GGSGKS
Trigger: TGATTTTCCTGAGCCTCCCCAGGACCCCCTAACAGG...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTTCGGGCCAACTCCAATaGCATTTTTCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGSGQLQ*HFSKAR
Trigger: CCTCGCTTTGGAAAAATGCCATTGGAGTTGGCCCGA...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAGTTGGATCACATCCGTaGGAAAGGGGAGTCCATCAT +
Preference number: 4 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQVGSHP*ERGVHH
Trigger: ATGATGGACTCCCCTTTCCCACGGATGTGATCCAAC...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTCATCCTCATAGTCCATaGGGGGTTCTGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSHPHSP*GVLLEG
Trigger: CCCCTCCAGCAGAACCCCCCATGGACTATGAGGATG...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCCATCCTCATAGTCCATaGGGGGTTCTGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLMLATEPDEKCIQASICHPHSP*GVLLEG
Trigger: CCCCTCCAGCAGAACCCCCCATGGACTATGAGGATG...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTGCTCGCAGGGGTTGTTaGCCAGGAATGTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLARRGC*PGMCRR
Trigger: TCTACGGCACATTCCTGGCCAACAACCCCTGCGAGC...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTCCTCTGCATTTTCCTaGTGGCCACAGCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSSSAFS*WPQRSP
Trigger: TGGAGACCGCTGTGGCCATCAGGAAAATGCAGAGGA...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTTCCTCTGCATTTTCCTaGTGGCCACAGCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGHMVPRRISQDGIFELCSSAFS*WPQRSP
Trigger: TGGAGACCGCTGTGGCCATCAGGAAAATGCAGAGGA...ACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACGCTCCAGGCTGCCTCTaGCCTCCTGAGAGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYAPGCL*PPESGY
Trigger: ATAACCACTCTCAGGAGGTCAGAGGCAGCCTGGAGC...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATAAGAGACACTGCAGAGTaGGCTGACAGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIRDTAE*ADSFLL
Trigger: GAGAAGGAAGCTGTCAGCTCACTCTGCAGTGTCTCT...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATATCACTGATCTGGCTCTaGGAAATTGGCTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEISLIWL*EIGFRA
Trigger: GGCCCGAAAGCCAATTTCTCAGAGCCAGATCAGTGA...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTGGAGGGGCACAGCAATaGCGAATGTCTAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFGGAQQ*RMSSLI
Trigger: GATGAGGCTAGACATTCGTCATTGCTGTGCCCCTCC...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCTCCACTCCCTCACCCTaGAGCACTGTGAAGGGTACC +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFSTPSP*STVKGT
Trigger: GGTACCCTTCACAGTGCTGCAGGGTGAGGGAGTGGA...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCACTCTCCAGACATTCTaGAGGTCAAAACCCATCCTT +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLTLQTF*RSKPIL
Trigger: AAGGATGGGTTTTGACCTGCAGAATGTCTGGAGAGT...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCAGTTTCTGTGGGGCTaGTGTGCTCTCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFQFLWG*CALHPR
Trigger: TCTGGGGTGGAGAGCACAGCAGCCCCACAGAAACTG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCTTTCCTCTCCAAGGGTaGATGGAGATGACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFFPLQG*MEMTQA
Trigger: TGCCTGCGTCATCTCCATGCACCCTTGGAGAGGAAA...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCTCAGAAGTCCTACCCTaGTCCTCTTGGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLMLATEPDEKCIQASICSEVLP*SSWAEG
Trigger: CCCTTCAGCCCAAGAGGAGCAGGGTAGGACTTCTGA...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCTTGAGGGCGAGATCTaGATGGAGTCTAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFLEGEI*MESRWG
Trigger: GCCCCACCTAGACTCCATGCAGATCTCGCCCTCAAG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATTCCCTCCTGGGCCTGTaGAGTGTCCATTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNSLLGL*SVHWND
Trigger: GTCATTCCAATGGACACTGCACAGGCCCAGGAGGGA...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCTCCCTCCTGGGCCTGTaGAGTGTCCATTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: SLMLATEPDEKCIQASICSLLGL*SVHWND
Trigger: GTCATTCCAATGGACACTGCACAGGCCCAGGAGGGA...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTCCAGTTGCTGGGATCTaGCATCTGGCTACACACAGC +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSPVAGI*HLATHS
Trigger: GCTGTGTGTAGCCAGATGCCAGATCCCAGCAACTGG...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACCAGGGCTACAATCTGTaGTGTACGGTCCCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYQGYNL*CTVPAV
Trigger: GACGGCTGGGACCGTACACCACAGATTGTAGCCCTG...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGCTACCCTGCTCCTCTTaGGCTGAAGGGTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVLPCSS*AEGSGA
Trigger: GGCCCCGGACCCTTCAGCCCAAGAGGAGCAGGGTAG...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCCTGTTAGGGGGTCCTaGGGAGGCTCAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFPVRGS*GGSGKS
Trigger: TGATTTTCCTGAGCCTCCCCAGGACCCCCTAACAGG...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACGCTCTGGAGTTTGGCTaGCCACACTTGGTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYALEFG*PHLVGC
Trigger: GCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGC...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTGCTCTGGAGTTTGGCTaGCCACACTTGGTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECALEFG*PHLVGC
Trigger: GCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGC...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCGCTCTGGAGTTTGGCTaGCCACACTTGGTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFALEFG*PHLVGC
Trigger: GCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGC...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTCAGTGGGATGCCATATaGTCTGGAACCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: SGHMVPRRISQDGIFELCQWDAI*SGTQRV
Trigger: GACTCGCTGGGTTCCAGACCATATGGCATCCCACTG...ACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCGTTACAGACGAGAACTaGGTCATAGAGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLVTDEN*VIELLI
Trigger: GATCAGCAACTCTATGACCCAGTTCTCGTCTGTAAC...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACGCTCGCAGGGGTTGTTaGCCAGGAATGTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYARRGC*PGMCRR
Trigger: TCTACGGCACATTCCTGGCCAACAACCCCTGCGAGC...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGTGCAGGGCCCGGACATaGCACACAGGATGCAGGACC +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVCRART*HTGCRT
Trigger: GGTCCTGCATCCTGTGTGTCATGTCCGGGCCCTGCA...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACAAGGGTGCATGGAGATaGCGCAGGCAGATAAACAGC +
Preference number: 4 (lower is better)
Translates to: SANQLEGVPLKTEPSCTDKGAWR*RRQINS
Trigger: GCTGTTTATCTGCCTGCGTCATCTCCATGCACCCTT...GTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCCAACTCCAGAGTCTATaGCTGTCTCTGCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFQLQSL*LSLLLQ
Trigger: CTGAAGGAGCAGAGACAGTCATAGACTCTGGAGTTG...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATACACTGCAGAGTGAGCTaGCAGCTTCCTTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIHCRVS*QLPSLE
Trigger: TTCTAGAGAAGGAAGCTGTCAGCTCACTCTGCAGTG...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTAGAGACACTGCAGAGTaGGCTGACAGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGHMVPRRISQDGIFELCRDTAE*ADSFLL
Trigger: GAGAAGGAAGCTGTCAGCTCACTCTGCAGTGTCTCT...ACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCAGGGGGATCTTGGCTaGGGAGGTCAGTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: PVFEPNSTEDSANQLEGVQGDLG*GGQYLA
Trigger: AGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTG...CACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTCACTGATCTGGCTCTaGGAAATTGGCTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSSLIWL*EIGFRA
Trigger: GGCCCGAAAGCCAATTTCTCAGAGCCAGATCAGTGA...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGAGACTTGCTTCGGATaGCTGGAAAACCACATCCGG +
Preference number: 4 (lower is better)
Translates to: SGHMVPRRISQDGIFELCETCFG*LENHIR
Trigger: CCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTC...ACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACCATCCTTGCGAGCTCTaGCTCCTGTCGACATCGGAT +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYHPCEL*LLSTSD
Trigger: ATCCGATGTCGACAGGAGGCAGAGCTCGCAAGGATG...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTTTTGGTACTCTCCAGTaGCGACAACCAGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSFGTLQ*RQPVAG
Trigger: CCCAGCAACTGGTTGTCGGCACTGGAGAGTACCAAA...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTTTTCCTCTCCAAGGGTaGATGGAGATGACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSFPLQG*MEMTQA
Trigger: TGCCTGCGTCATCTCCATGCACCCTTGGAGAGGAAA...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGCCTTCAGGACTGCTGTaGCAGGGCTCCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGEPSGLL*QGSRLP
Trigger: AGGCAGCCTGGAGCCCTGGCACAGCAGTCCTGAAGG...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAATCAGAAGTCCTACCCTaGTCCTCTTGGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKSEVLP*SSWAEG
Trigger: CCCTTCAGCCCAAGAGGAGCAGGGTAGGACTTCTGA...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTTATTGCTCGGCCTCTTaGTACAACAGCCATAAGCAA +
Preference number: 4 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGYCSAS*YNSHKQ
Trigger: TTGCTTATGGCTGTTGTAGCAAGAGGCCGAGCAATA...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACAACAGATCCTTGGCTTaGATGTACTCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SANQLEGVPLKTEPSCTDNRSLA*MYSRLG
Trigger: CCCCAGCCTGGAGTACATCCAAGCCAAGGATCTGTT...GTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTAACAGATCCTTGGCTTaGATGTACTCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSNRSLA*MYSRLG
Trigger: CCCCAGCCTGGAGTACATCCAAGCCAAGGATCTGTT...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATAACAGATCCTTGGCTTaGATGTACTCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNNRSLA*MYSRLG
Trigger: CCCCAGCCTGGAGTACATCCAAGCCAAGGATCTGTT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACGGGGGAACAGATCCTTaGCTTGGATGTACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYGGTDP*LGCTPG
Trigger: GCCTGGAGTACATCCAAGCCAAGGATCTGTTCCCCC...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGCACAGGTGGGTATGCTaGTCCTCCTCGGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVHRWVC*SSSVSP
Trigger: GGGGCTGACCGAGGAGGACCAGCATACCCACCTGTG...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTGGAAGCTATTCCGGATaGCGTGGATGTTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFGSYSG*RGCWPF
Trigger: GAATGGCCAACATCCACGCCATCCGGAATAGCTTCC...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTGGAAGCTATTCCGGATaGCGTGGATGTTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSGSYSG*RGCWPF
Trigger: GAATGGCCAACATCCACGCCATCCGGAATAGCTTCC...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACCCAGTTGCTGGGATCTaGCATCTGGCTACACACAGC +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYPVAGI*HLATHS
Trigger: GCTGTGTGTAGCCAGATGCCAGATCCCAGCAACTGG...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACCCGACAACCAGTTGCTaGGATCTGGCATCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYPTTSC*DLASGY
Trigger: GTAGCCAGATGCCAGATCCCAGCAACTGGTTGTCGG...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCCGACAACCAGTTGCTaGGATCTGGCATCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFPTTSC*DLASGY
Trigger: GTAGCCAGATGCCAGATCCCAGCAACTGGTTGTCGG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATAGTGCTGCAGCCATTTaGTACTCTCCAGTGCCGACA +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNSAAAI*YSPVPT
Trigger: TGTCGGCACTGGAGAGTACCAAATGGCTGCAGCACT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACGACTCCACTAACACTTaGAAGCCCTCCAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SANQLEGVPLKTEPSCTDDSTNT*KPSRVL
Trigger: CAGGACTCTGGAGGGCTTCCAAGTGTTAGTGGAGTC...GTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGGACTCCACTAACACTTaGAAGCCCTCCAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQDSTNT*KPSRVL
Trigger: CAGGACTCTGGAGGGCTTCCAAGTGTTAGTGGAGTC...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCTCCCACAGTCAGCTGTaGGCTTCCAACTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFSHSQL*ASNSRV
Trigger: GACTCTGGAGTTGGAAGCCCACAGCTGACTGTGGGA...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGTGCATGGAGTCTAGGTaGGGCTGTTGGGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: PVFEPNSTEDSANQLEGVCMESR*GCWGVP
Trigger: AGGTACTCCCCAACAGCCCCACCTAGACTCCATGCA...CACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATGAGCTAGGCTGTTCCTaGTGGGAGATACTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNELGCS*WEILAV
Trigger: TACGGCAAGTATCTCCCACCAGGAACAGCCTAGCTC...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTCATCCTCATAGTCCATaGGGGGTTCTGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTAHPHSP*GVLLEG
Trigger: CCCCTCCAGCAGAACCCCCCATGGACTATGAGGATG...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGGATGCCATATGGTCTaGAACCCAGCGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTGCHMV*NPASHL
Trigger: GAGGTGACTCGCTGGGTTCCAGACCATATGGCATCC...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCCAGTGGGATGCCATATaGTCTGGAACCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSQWDAI*SGTQRV
Trigger: GACTCGCTGGGTTCCAGACCATATGGCATCCCACTG...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCCAGTGGGATGCCATATaGTCTGGAACCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: CSLMLATEPDEKCIQASIQWDAI*SGTQRV
Trigger: GACTCGCTGGGTTCCAGACCATATGGCATCCCACTG...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCACTGTGAAGGGTACCTaGAGATTCTCCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLMLATEPDEKCIQASICTVKGT*RFSSSF
Trigger: GAAGGAGGAGGAGAATCTTCAGGTACCCTTCACAGT...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGACTGTGAAGGGTACCTaGAGATTCTCCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQTVKGT*RFSSSF
Trigger: GAAGGAGGAGGAGAATCTTCAGGTACCCTTCACAGT...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp AGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACCTGCCTCTGACCTCCTaGGAGTGGTTATTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SANQLEGVPLKTEPSCTDLPLTS*EWLFRL
Trigger: TAACCTGAATAACCACTCTCAGGAGGTCAGAGGCAG...GTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCAGCTCCAGGCTGCCTCTaGCCTCCTGAGAGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSAPGCL*PPESGY
Trigger: ATAACCACTCTCAGGAGGTCAGAGGCAGCCTGGAGC...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGCAACTCCAGAGTCTATaGCTGTCTCTGCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQQLQSL*LSLLLQ
Trigger: CTGAAGGAGCAGAGACAGTCATAGACTCTGGAGTTG...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTCACTGATCTGGCTCTaGGAAATTGGCTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: CSLMLATEPDEKCIQASISLIWL*EIGFRA
Trigger: GGCCCGAAAGCCAATTTCTCAGAGCCAGATCAGTGA...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTCTCTCCGCTTGGGAATaGAGTCATCATCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSLSAWE*SHHPLE
Trigger: TTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAG...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGTTCCCAGCTTGCTTCTaGAAGGCAGTCTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQFPACF*KAVFTV
Trigger: CACAGTGAAGACTGCCTTTCAGAAGCAAGCTGGGAA...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATACCACTTTGGAGTCCTTaGAGGCAATGTGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIPLWSP*RQCATE
Trigger: TTCAGTTGCACATTGCCTGCAAGGACTCCAAAGTGG...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCATGTCGACATCGGATGTaGTCTCCTGGCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSCRHRM*SPGWHR
Trigger: CCTGTGCCAGCCAGGAGAGCACATCCGATGTCGACA...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGCATCCTTGCGAGCTCTaGCTCCTGTCGACATCGGAT +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLEHPCEL*LLSTSD
Trigger: ATCCGATGTCGACAGGAGGCAGAGCTCGCAAGGATG...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATAATACCACAACAGGGATaGGTTTCCAAGAGCGGAAAG +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIIPQQG*VSKSGK
Trigger: CTTTCCGCTCTTGGAAACGCATCCCTGTTGTGGTAT...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAATGGCAGCCCCGTTaGGCAGGTGTCTGTATACCA +
Preference number: 4 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGQWQPR*AGVCIP
Trigger: TGGTATACAGACACCTGCGCAACGGGGCTGCCATTG...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAATTTGGTACTCTCCAGTaGCGACAACCAGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKFGTLQ*RQPVAG
Trigger: CCCAGCAACTGGTTGTCGGCACTGGAGAGTACCAAA...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACTTTGGTACTCTCCAGTaGCGACAACCAGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYFGTLQ*RQPVAG
Trigger: CCCAGCAACTGGTTGTCGGCACTGGAGAGTACCAAA...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGATCAGAAGTCCTACCCTaGTCCTCTTGGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGSEVLP*SSWAEG
Trigger: CCCTTCAGCCCAAGAGGAGCAGGGTAGGACTTCTGA...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCACACTTGGTGGGTTaGAAAGGCTGCCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSPHLVG*KGCPDC
Trigger: ACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGG...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATAGAAGAGAAGGCTTTGTaGTGGAGACTTGCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIEEKAL*WRLASD
Trigger: ATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTC...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGCCGACAACCAGTTGCTaGGATCTGGCATCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVPTTSC*DLASGY
Trigger: GTAGCCAGATGCCAGATCCCAGCAACTGGTTGTCGG...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTCCCGATCTACCGTATTaGCTACCAACACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSPDLPY*LPTQLL
Trigger: AAGCAGCTGTGTTGGTAGCCAATACGGTAGATCGGG...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTCAGGGCTACAATCTGTaGTGTACGGTCCCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGQGYNL*CTVPAV
Trigger: GACGGCTGGGACCGTACACCACAGATTGTAGCCCTG...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTTCCCACAGTCAGCTGTaGGCTTCCAACTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTASHSQL*ASNSRV
Trigger: GACTCTGGAGTTGGAAGCCCACAGCTGACTGTGGGA...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTCTCAAGTACTCTTTCTaGCTACTGGGCAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLLKYSF*LLGRGG
Trigger: TCCTCCTCTGCCCAGTAGCCAGAAAGAGTACTTGAG...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTTGCATGGAGTCTAGGTaGGGCTGTTGGGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTACMESR*GCWGVP
Trigger: AGGTACTCCCCAACAGCCCCACCTAGACTCCATGCA...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp CCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGGAGGAGGTCAGTATTTaGCTCTGGAGTTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVFEPNSTEDSANQLEGVEEVSI*LWSLAG
Trigger: GCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTC...CACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTGAACCAGGGGGATCTTaGCTGAGGAGGTCAGTATTT +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSEPGGS*LRRSVF
Trigger: AAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTC...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATGAACCAGGGGGATCTTaGCTGAGGAGGTCAGTATTT +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNEPGGS*LRRSVF
Trigger: AAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTC...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTTCGGGCCAACTCCAATaGCATTTTTCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFSGQLQ*HFSKAR
Trigger: CCTCGCTTTGGAAAAATGCCATTGGAGTTGGCCCGA...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTCTGGCTCTGAGAAATTaGCTTTCGGGCCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSLALRN*LSGQLQ
Trigger: TTGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAG...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATAGAAGTCATCATCCCTTaGAAGCTGTCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIEVIIP*KLSQFD
Trigger: GTCAAACTGGGACAGCTTCCAAGGGATGATGACTTC...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCGTTGTTCTTCCCTCCTaGGCCTGTGCAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSVVLPS*ACAVSI
Trigger: AATGGACACTGCACAGGCCCAGGAGGGAAGAACAAC...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAGTTGTTCTTCCCTCCTaGGCCTGTGCAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKVVLPS*ACAVSI
Trigger: AATGGACACTGCACAGGCCCAGGAGGGAAGAACAAC...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGCCATACCAAGGAACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATGAGAAGGCTTTGTGCTaGAGACTTGCTTCGGATGAC +
Preference number: 4 (lower is better)
Translates to: SHTKEPSRLHLKQILPSNEKALC*RLASDD
Trigger: GTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTC...ATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGTTCCTTGGTATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGAGAAGGCTTTGTGCTaGAGACTTGCTTCGGATGAC +
Preference number: 4 (lower is better)
Translates to: SGHMVPRRISQDGIFELCEKALC*RLASDD
Trigger: GTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTC...ACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTGTTGGATCACATCCGTaGGAAAGGGGAGTCCATCAT +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSVGSHP*ERGVHH
Trigger: ATGATGGACTCCCCTTTCCCACGGATGTGATCCAAC...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTGCCGTAACCTGTGTTaGATCACATCCGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSCRNLC*ITSVGK
Trigger: CTTTCCCACGGATGTGATCCAACACAGGTTACGGCA...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTTGCCGTAACCTGTGTTaGATCACATCCGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSCRNLC*ITSVGK
Trigger: CTTTCCCACGGATGTGATCCAACACAGGTTACGGCA...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGAAGGGTGCATGGAGATaGCGCAGGCAGATAAACAGC +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVKGAWR*RRQINS
Trigger: GCTGTTTATCTGCCTGCGTCATCTCCATGCACCCTT...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTCAGGGGGATCTTGGCTaGGGAGGTCAGTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGQGDLG*GGQYLA
Trigger: AGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTG...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATACAGTGTCCATTGGAATaGCTAGAACAGACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIQCPLE*LEQTGD
Trigger: ATCTCCTGTCTGTTCTAGTCATTCCAATGGACACTG...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCCAGTGTCCATTGGAATaGCTAGAACAGACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFQCPLE*LEQTGD
Trigger: ATCTCCTGTCTGTTCTAGTCATTCCAATGGACACTG...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTTTCCCAGCTTGCTTCTaGAAGGCAGTCTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTFPACF*KAVFTV
Trigger: CACAGTGAAGACTGCCTTTCAGAAGCAAGCTGGGAA...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCACTCTCCAGACATTCTaGAGGTCAAAACCCATCCTT +
Preference number: 4 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFTLQTF*RSKPIL
Trigger: AAGGATGGGTTTTGACCTGCAGAATGTCTGGAGAGT...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTATACCACAACAGGGATaGGTTTCCAAGAGCGGAAAG +
Preference number: 4 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFIPQQG*VSKSGK
Trigger: CTTTCCGCTCTTGGAAACGCATCCCTGTTGTGGTAT...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTCAATGGCAGCCCCGTTaGGCAGGTGTCTGTATACCA +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVQWQPR*AGVCIP
Trigger: TGGTATACAGACACCTGCGCAACGGGGCTGCCATTG...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTTGCTGTGTAGGACCGTaGATCCAGGATCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECCCVGP*IQDQQF
Trigger: AAACTGCTGATCCTGGATGCACGGTCCTACACAGCA...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp AGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACATCACTGACAAGTGCTaGAGCCATTTGGTACTCTCC +
Preference number: 4 (lower is better)
Translates to: SANQLEGVPLKTEPSCTDITDKC*SHLVLS
Trigger: GGAGAGTACCAAATGGCTGCAGCACTTGTCAGTGAT...GTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGAGCATCACTGACAAGTaGTGCAGCCATTTGGTACTC +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQSITDK*CSHLVL
Trigger: GAGTACCAAATGGCTGCAGCACTTGTCAGTGATGCT...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTAGCATCACTGACAAGTaGTGCAGCCATTTGGTACTC +
Preference number: 4 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLSITDK*CSHLVL
Trigger: GAGTACCAAATGGCTGCAGCACTTGTCAGTGATGCT...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTCCACACTTGGTGGGTTaGAAAGGCTGCCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGPHLVG*KGCPDC
Trigger: ACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGG...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCACCACACTTGGTGGGTTaGAAAGGCTGCCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSPHLVG*KGCPDC
Trigger: ACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGG...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACTACCCTGCTTCGATCTaGCGTAACCTGTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYYPASI*RNLCWI
Trigger: GATCCAACACAGGTTACGGCAGATCGAAGCAGGGTA...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTGTTAAAGCAGTGGGATaGCATATGGTCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSVKAVG*HMVWNP
Trigger: TGGGTTCCAGACCATATGGCATCCCACTGCTTTAAC...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCTGTTGGCCAGGAATGTaGCGTAGAGACACGAGTATG +
Preference number: 4 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSCWPGM*RRDTSM
Trigger: CATACTCGTGTCTCTACGGCACATTCCTGGCCAACA...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTTCCGTTTATAGATGTTaGGCTTCTCTCGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECSVYRC*ASLARR
Trigger: CCTGCGAGCGAGAGAAGCGCAACATCTATAAACGGA...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAATCCGTTTATAGATGTTaGGCTTCTCTCGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKSVYRC*ASLARR
Trigger: CCTGCGAGCGAGAGAAGCGCAACATCTATAAACGGA...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCAGGGGGAACAGATCCTTaGCTTGGATGTACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSGGTDP*LGCTPG
Trigger: GCCTGGAGTACATCCAAGCCAAGGATCTGTTCCCCC...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGCACCTCACCACTTTaGAGTCCTTGCAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLEGTSPL*SPCRQC
Trigger: ACATTGCCTGCAAGGACTCCAAAGTGGTGAGGTGCC...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTTGAGAGCCACTCTTaGCACTGCTTGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFLESHS*HCLKVE
Trigger: CTCTACTTTCAAGCAGTGCCAAGAGTGGCTCTCAAG...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCCTGGCTGGCACAGGTaGGTATGCTGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EFNSNRMGIPISYTMICSPGWHR*VCWSSS
Trigger: CGAGGAGGACCAGCATACCCACCTGTGCCAGCCAGG...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAACTATTCCGGATGGCGTaGATGTTGGCCATTCCCATA +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKLFRMA*MLAIPI
Trigger: TATGGGAATGGCCAACATCCACGCCATCCGGAATAG...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGAAGTGCTGCAGCCATTTaGTACTCTCCAGTGCCGACA +
Preference number: 4 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGSAAAI*YSPVPT
Trigger: TGTCGGCACTGGAGAGTACCAAATGGCTGCAGCACT...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCCCGATCTACCGTATTaGCTACCAACACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFPDLPY*LPTQLL
Trigger: AAGCAGCTGTGTTGGTAGCCAATACGGTAGATCGGG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCCCCGATCTACCGTATTaGCTACCAACACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CSLMLATEPDEKCIQASIPDLPY*LPTQLL
Trigger: AAGCAGCTGTGTTGGTAGCCAATACGGTAGATCGGG...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCGATCCAGTAGTATTTTaGCCAGGGCTACAATCTGTG +
Preference number: 4 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFDPVVF*PGLQSV
Trigger: CACAGATTGTAGCCCTGGCCAAAATACTACTGGATC...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGAGACTCCACTAACACTTaGAAGCCCTCCAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGDSTNT*KPSRVL
Trigger: CAGGACTCTGGAGGGCTTCCAAGTGTTAGTGGAGTC...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCCTGGCTCTGAGCCACTaGGGAAAGGTAAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSLALSH*GKVKIH
Trigger: ATGGATCTTTACCTTTCCCCAGTGGCTCAGAGCCAG...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCAACTCTTTCTGGCTACTaGGCAGAGGAGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSTLSGY*AEEEEG
Trigger: GCCTTCCTCCTCCTCTGCCCAGTAGCCAGAAAGAGT...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTACTCTTTCTGGCTACTaGGCAGAGGAGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVTLSGY*AEEEEG
Trigger: GCCTTCCTCCTCCTCTGCCCAGTAGCCAGAAAGAGT...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCATGCATGGAGTCTAGGTaGGGCTGTTGGGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSCMESR*GCWGVP
Trigger: AGGTACTCCCCAACAGCCCCACCTAGACTCCATGCA...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGGAACCAGGGGGATCTTaGCTGAGGAGGTCAGTATTT +
Preference number: 4 (lower is better)
Translates to: PVFEPNSTEDSANQLEGVEPGGS*LRRSVF
Trigger: AAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTC...CACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGAGAGCTAGGCTGTTCCTaGTGGGAGATACTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGELGCS*WEILAV
Trigger: TACGGCAAGTATCTCCCACCAGGAACAGCCTAGCTC...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCCTGGCTCTGAGAAATTaGCTTTCGGGCCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: CSLMLATEPDEKCIQASILALRN*LSGQLQ
Trigger: TTGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAG...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATGAAGTCATCATCCCTTaGAAGCTGTCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNEVIIP*KLSQFD
Trigger: GTCAAACTGGGACAGCTTCCAAGGGATGATGACTTC...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCCTTGCTTCGGATGACTaGAAAACCACATCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLMLATEPDEKCIQASICLASDD*KTTSGC
Trigger: ACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAG...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTCTTGCTTCGGATGACTaGAAAACCACATCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSLASDD*KTTSGC
Trigger: ACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAG...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCGTTGGATCACATCCGTaGGAAAGGGGAGTCCATCAT +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFVGSHP*ERGVHH
Trigger: ATGATGGACTCCCCTTTCCCACGGATGTGATCCAAC...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCTGCCGTAACCTGTGTTaGATCACATCCGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSCRNLC*ITSVGK
Trigger: CTTTCCCACGGATGTGATCCAACACAGGTTACGGCA...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTGGATGCCATATGGTCTaGAACCCAGCGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVGCHMV*NPASHL
Trigger: GAGGTGACTCGCTGGGTTCCAGACCATATGGCATCC...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTGGATGCCATATGGTCTaGAACCCAGCGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGGCHMV*NPASHL
Trigger: GAGGTGACTCGCTGGGTTCCAGACCATATGGCATCC...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATATGGGCAGCTTAAGGTaGCAGCATCCAGCACAAAAT +
Preference number: 4 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNMGSLR*QHPAQN
Trigger: ATTTTGTGCTGGATGCTGCCACCTTAAGCTGCCCAT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACATGGGCAGCTTAAGGTaGCAGCATCCAGCACAAAAT +
Preference number: 4 (lower is better)
Translates to: SANQLEGVPLKTEPSCTDMGSLR*QHPAQN
Trigger: ATTTTGTGCTGGATGCTGCCACCTTAAGCTGCCCAT...GTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTATGGGCAGCTTAAGGTaGCAGCATCCAGCACAAAAT +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSMGSLR*QHPAQN
Trigger: ATTTTGTGCTGGATGCTGCCACCTTAAGCTGCCCAT...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCAGGCAATGTGCAACTaGAACATATCACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFQAMCN*NISRLS
Trigger: GGAAAGCCGTGATATGTTTCAGTTGCACATTGCCTG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTGCTTGTAATTGCTGTTaGTATGCGAGACTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLACNCC*YARLSR
Trigger: TCTGGAGAGTCTCGCATATCAACAGCAATTACAAGC...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAACTTTGGCAATGGACGTaGCGAGGTATTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKLWQWT*RGIHHQ
Trigger: CTGATGATGAATACCTCGTCACGTCCATTGCCAAAG...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTAAGGGTGCATGGAGATaGCGCAGGCAGATAAACAGC +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGKGAWR*RRQINS
Trigger: GCTGTTTATCTGCCTGCGTCATCTCCATGCACCCTT...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGCTGCCTCTGACCTCCTaGGAGTGGTTATTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVLPLTS*EWLFRL
Trigger: TAACCTGAATAACCACTCTCAGGAGGTCAGAGGCAG...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACTTTCTTCCAGGACCTTaGTGTCAGAGGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYFLPGP*CQRCCS
Trigger: AGAGCAACACCTCTGACATCAAGGTCCTGGAAGAAA...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCTTTCTTCCAGGACCTTaGTGTCAGAGGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSFLPGP*CQRCCS
Trigger: AGAGCAACACCTCTGACATCAAGGTCCTGGAAGAAA...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTCACTGCAGAGTGAGCTaGCAGCTTCCTTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTAHCRVS*QLPSLE
Trigger: TTCTAGAGAAGGAAGCTGTCAGCTCACTCTGCAGTG...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGCACTGCAGAGTGAGCTaGCAGCTTCCTTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLEHCRVS*QLPSLE
Trigger: TTCTAGAGAAGGAAGCTGTCAGCTCACTCTGCAGTG...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTAGAGACACTGCAGAGTaGGCTGACAGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGRDTAE*ADSFLL
Trigger: GAGAAGGAAGCTGTCAGCTCACTCTGCAGTGTCTCT...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGCTCTCCGCTTGGGAATaGAGTCATCATCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVLSAWE*SHHPLE
Trigger: TTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAG...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTGAGACTTGCTTCGGATaGCTGGAAAACCACATCCGG +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGETCFG*LENHIR
Trigger: CCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTC...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTGAGACTTGCTTCGGATaGCTGGAAAACCACATCCGG +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVETCFG*LENHIR
Trigger: CCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTC...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGGGAGGGGCACAGCAATaGCGAATGTCTAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVGGAQQ*RMSSLI
Trigger: GATGAGGCTAGACATTCGTCATTGCTGTGCCCCTCC...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCAGGCAGTCTTCACTGTaGTCAGAGCCAAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSLMLATEPDEKCIQASIRQSSL*SEPKSS
Trigger: TGAAGACTTTGGCTCTGATCACAGTGAAGACTGCCT...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTTTCCCAGCTTGCTTCTaGAAGGCAGTCTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSFPACF*KAVFTV
Trigger: CACAGTGAAGACTGCCTTTCAGAAGCAAGCTGGGAA...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTTCAGATGTTGGCTCATaGGTTCCCTGGCACGAGATA +
Preference number: 4 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSSDVGS*VPWHEI
Trigger: TATCTCGTGCCAGGGAACTCATGAGCCAACATCTGA...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGTCAGATGTTGGCTCATaGGTTCCCTGGCACGAGATA +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVSDVGS*VPWHEI
Trigger: TATCTCGTGCCAGGGAACTCATGAGCCAACATCTGA...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGTGTCGACATCGGATGTaGTCTCCTGGCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLCRHRM*SPGWHR
Trigger: CCTGTGCCAGCCAGGAGAGCACATCCGATGTCGACA...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTACTCTCCAGACATTCTaGAGGTCAAAACCCATCCTT +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSTLQTF*RSKPIL
Trigger: AAGGATGGGTTTTGACCTGCAGAATGTCTGGAGAGT...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACATACCACAACAGGGATaGGTTTCCAAGAGCGGAAAG +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYIPQQG*VSKSGK
Trigger: CTTTCCGCTCTTGGAAACGCATCCCTGTTGTGGTAT...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGTGCTGTGTAGGACCGTaGATCCAGGATCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLECCVGP*IQDQQF
Trigger: AAACTGCTGATCCTGGATGCACGGTCCTACACAGCA...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGGTCTATGACTGTCTCTaGTCCTTCAGGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVVYDCL*SFRTAV
Trigger: CACAGCAGTCCTGAAGGAGCAGAGACAGTCATAGAC...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGTCTATGACTGTCTCTaGTCCTTCAGGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLEVYDCL*SFRTAV
Trigger: CACAGCAGTCCTGAAGGAGCAGAGACAGTCATAGAC...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTTACCCTGCTTCGATCTaGCGTAACCTGTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTAYPASI*RNLCWI
Trigger: GATCCAACACAGGTTACGGCAGATCGAAGCAGGGTA...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACCTTGAGAGCCACTCTTaGCACTGCTTGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYLESHS*HCLKVE
Trigger: CTCTACTTTCAAGCAGTGCCAAGAGTGGCTCTCAAG...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTAGTGCTGCAGCCATTTaGTACTCTCCAGTGCCGACA +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVSAAAI*YSPVPT
Trigger: TGTCGGCACTGGAGAGTACCAAATGGCTGCAGCACT...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGGATCCAGTAGTATTTTaGCCAGGGCTACAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQDPVVF*PGLQSV
Trigger: CACAGATTGTAGCCCTGGCCAAAATACTACTGGATC...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTGATCCAGTAGTATTTTaGCCAGGGCTACAATCTGTG +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSDPVVF*PGLQSV
Trigger: CACAGATTGTAGCCCTGGCCAAAATACTACTGGATC...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGACTCTTTCTGGCTACTaGGCAGAGGAGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGETLSGY*AEEEEG
Trigger: GCCTTCCTCCTCCTCTGCCCAGTAGCCAGAAAGAGT...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGCTCAAGTACTCTTTCTaGCTACTGGGCAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVLKYSF*LLGRGG
Trigger: TCCTCCTCTGCCCAGTAGCCAGAAAGAGTACTTGAG...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGCTAGGCTGTTCCTGGTaGGAGATACTTGCCGTAGAA +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVLGCSW*EILAVE
Trigger: TTCTACGGCAAGTATCTCCCACCAGGAACAGCCTAG...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGCTGGCTCTGAGAAATTaGCTTTCGGGCCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLELALRN*LSGQLQ
Trigger: TTGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAG...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGAGAGAAGGCTTTGTGCTaGAGACTTGCTTCGGATGAC +
Preference number: 4 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGEKALC*RLASDD
Trigger: GTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTC...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTGTTACAGACGAGAACTaGGTCATAGAGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSVTDEN*VIELLI
Trigger: GATCAGCAACTCTATGACCCAGTTCTCGTCTGTAAC...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAGCTTGTAATTGCTGTTaGTATGCGAGACTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKACNCC*YARLSR
Trigger: TCTGGAGAGTCTCGCATATCAACAGCAATTACAAGC...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCACAACTCCAGAGTCTATaGCTGTCTCTGCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSQLQSL*LSLLLQ
Trigger: CTGAAGGAGCAGAGACAGTCATAGACTCTGGAGTTG...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGGGAGGGGCACAGCAATaGCGAATGTCTAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLGGAQQ*RMSSLI
Trigger: GATGAGGCTAGACATTCGTCATTGCTGTGCCCCTCC...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGAGCATCACTGACAAGTaGTGCAGCCATTTGGTACTC +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLESITDK*CSHLVL
Trigger: GAGTACCAAATGGCTGCAGCACTTGTCAGTGATGCT...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTTCATTTTGGTCCTCTaGATTTTCCTGATGGCCACA +
Preference number: 4 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLFILVL*IFLMAT
Trigger: TGTGGCCATCAGGAAAATGCAGAGGACCAAAATGAA...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGTATTGCTCGGCCTCTTaGTACAACAGCCATAAGCAA +
Preference number: 4 (lower is better)
Translates to: PVFEPNSTEDSANQLEGVYCSAS*YNSHKQ
Trigger: TTGCTTATGGCTGTTGTAGCAAGAGGCCGAGCAATA...CACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGAAGAGAAGGCTTTGTaGTGGAGACTTGCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: AIPVFEPNSTEDSANQLEEEKAL*WRLASD
Trigger: ATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTC...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTTACCCTGCTTCGATCTaGCGTAACCTGTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVYPASI*RNLCWI
Trigger: GATCCAACACAGGTTACGGCAGATCGAAGCAGGGTA...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGAGTTAAAGCAGTGGGATaGCATATGGTCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGVKAVG*HMVWNP
Trigger: TGGGTTCCAGACCATATGGCATCCCACTGCTTTAAC...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTCGTTCCCACAATTTCTaGAATGATGTCTTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSRSHNF*NDVFVW
Trigger: CCAAACGAAGACATCATTGCAGAAATTGTGGGAACG...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTCGTTCCCACAATTTCTaGAATGATGTCTTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSRSHNF*NDVFVW
Trigger: CCAAACGAAGACATCATTGCAGAAATTGTGGGAACG...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACCACGAGTATGTGTGCTaGACCAGCTTTACCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYHEYVC*TSFTRN
Trigger: ATTTCTGGTAAAGCTGGTGCAGCACACATACTCGTG...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGGGCACCTCACCACTTTaGAGTCCTTGCAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVGTSPL*SPCRQC
Trigger: ACATTGCCTGCAAGGACTCCAAAGTGGTGAGGTGCC...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGGAGGAGGTCAGTATTTaGCTCTGGAGTTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVEEVSI*LWSLAG
Trigger: GCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTC...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGGAGCTAGGCTGTTCCTaGTGGGAGATACTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVELGCS*WEILAV
Trigger: TACGGCAAGTATCTCCCACCAGGAACAGCCTAGCTC...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGGTTGTTCTTCCCTCCTaGGCCTGTGCAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVVVLPS*ACAVSI
Trigger: AATGGACACTGCACAGGCCCAGGAGGGAAGAACAAC...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGCTTGCTTCGGATGACTaGAAAACCACATCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVLASDD*KTTSGC
Trigger: ACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAG...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACTCACAGTTAAAGCAGTaGGATGCCATATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYSQLKQ*DAIWSG
Trigger: TCCAGACCATATGGCATCCCACTGCTTTAACTGTGA...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CAA 72 bp CATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTaGGCCACATCATGTCACTTACACCCACAACAGCTC +
Preference number: 4 (lower is better)
Translates to: HVCHNATAQFGF*ATSCHLHPQQL
Trigger: GAGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
3UTR CAA 72 bp GCACATTGCATGTTTGTCACAACGCAACTGCACAGTTaGGATTTTTGGCCACATCATGTCACTTACACCCAC +
Preference number: 4 (lower is better)
Translates to: AHCMFVTTQLHS*DFWPHHVTYTH
Trigger: GTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTCAGGCAATGTGCAACTaGAACATATCACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVQAMCN*NISRLS
Trigger: GGAAAGCCGTGATATGTTTCAGTTGCACATTGCCTG...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTCTTTGGCAATGGACGTaGCGAGGTATTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGLWQWT*RGIHHQ
Trigger: CTGATGATGAATACCTCGTCACGTCCATTGCCAAAG...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp TCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTAATGTGTTCATAACATaGGTTACAGACGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: SGHMVPRRISQDGIFELCNVFIT*VTDENW
Trigger: CCAGTTCTCGTCTGTAACTCATGTTATGAACACATT...ACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCAATGTGTTCATAACATaGGTTACAGACGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: SLMLATEPDEKCIQASICNVFIT*VTDENW
Trigger: CCAGTTCTCGTCTGTAACTCATGTTATGAACACATT...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAAATGAGGGCATCGGTTaGCCGGCCCAGGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQNEGIG*PAQEFH
Trigger: GTGGAATTCCTGGGCCGGGCAACCGATGCCCTCATT...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACGAAATCTGTGTCACATaGCTCACTGGCATCATTAGT +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYEICVT*LTGIIS
Trigger: ACTAATGATGCCAGTGAGGCATGTGACACAGATTTC...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCGAAATCTGTGTCACATaGCTCACTGGCATCATTAGT +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFEICVT*LTGIIS
Trigger: ACTAATGATGCCAGTGAGGCATGTGACACAGATTTC...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGTGCTGTGTAGGACCGTaGATCCAGGATCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGECCVGP*IQDQQF
Trigger: AAACTGCTGATCCTGGATGCACGGTCCTACACAGCA...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCGTTCCCACAATTTCTaGAATGATGTCTTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFRSHNF*NDVFVW
Trigger: CCAAACGAAGACATCATTGCAGAAATTGTGGGAACG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGTGTTGGCCAGGAATGTaGCGTAGAGACACGAGTATG +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVCWPGM*RRDTSM
Trigger: CATACTCGTGTCTCTACGGCACATTCCTGGCCAACA...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGGGCACCTCACCACTTTaGAGTCCTTGCAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLGTSPL*SPCRQC
Trigger: ACATTGCCTGCAAGGACTCCAAAGTGGTGAGGTGCC...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTCTTGAGAGCCACTCTTaGCACTGCTTGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGLESHS*HCLKVE
Trigger: CTCTACTTTCAAGCAGTGCCAAGAGTGGCTCTCAAG...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGTCGGGCCAACTCCAATaGCATTTTTCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVSGQLQ*HFSKAR
Trigger: CCTCGCTTTGGAAAAATGCCATTGGAGTTGGCCCGA...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTGAAGTCATCATCCCTTaGAAGCTGTCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGEVIIP*KLSQFD
Trigger: GTCAAACTGGGACAGCTTCCAAGGGATGATGACTTC...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR TCA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTAAAATGAGAACTCACTaGTCTGGCTCTGAGAAATTG +
Preference number: 4 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTKMRTH*SGSEKL
Trigger: CAATTTCTCAGAGCCAGATCAGTGAGTTCTCATTTT...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTAATGTGTTCATAACATaGGTTACAGACGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECNVFIT*VTDENW
Trigger: CCAGTTCTCGTCTGTAACTCATGTTATGAACACATT...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGATCACTGACAAGTGCTaGAGCCATTTGGTACTCTCC +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVITDKC*SHLVLS
Trigger: GGAGAGTACCAAATGGCTGCAGCACTTGTCAGTGAT...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGATCACTGACAAGTGCTaGAGCCATTTGGTACTCTCC +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGEITDKC*SHLVLS
Trigger: GGAGAGTACCAAATGGCTGCAGCACTTGTCAGTGAT...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTCTCGAATATGCTTATTaGTCGGCCTCTTGCTACAAC +
Preference number: 4 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVLEYAY*SASCYN
Trigger: GTTGTAGCAAGAGGCCGAGCAATAAGCATATTCGAG...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGGAAGAGAAGGCTTTGTaGTGGAGACTTGCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVEEKAL*WRLASD
Trigger: ATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTC...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGCTGGCTCTGAGCCACTaGGGAAAGGTAAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLLALSH*GKVKIH
Trigger: ATGGATCTTTACCTTTCCCCAGTGGCTCAGAGCCAG...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAATCCCACAGTCAGCTGTaGGCTTCCAACTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQSHSQL*ASNSRV
Trigger: GACTCTGGAGTTGGAAGCCCACAGCTGACTGTGGGA...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGCTCAAGTACTCTTTCTaGCTACTGGGCAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLLKYSF*LLGRGG
Trigger: TCCTCCTCTGCCCAGTAGCCAGAAAGAGTACTTGAG...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTTCACAGTTAAAGCAGTaGGATGCCATATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGSQLKQ*DAIWSG
Trigger: TCCAGACCATATGGCATCCCACTGCTTTAACTGTGA...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CCA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACAATGATGTCTTCGTTTaGCCAACCAGAATTCACAGT +
Preference number: 4 (lower is better)
Translates to: PRRISQDGIFELCVHEPYNDVFV*PTRIHS
Trigger: ACTGTGAATTCTGGTTGGCCAAACGAAGACATCATT...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CAA 72 bp AAAATGCATCCAAGCCTCTATCTGCCATACCAGTCTTaGAACCAAACTCCACAGAAGACAGTGCTAATCAAC +
Preference number: 4 (lower is better)
Translates to: KMHPSLYLPYQS*NQTPQKTVLIN
Trigger: GTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGCAGATAGAGGCTTGGATGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGGCTTGTAATTGCTGTTaGTATGCGAGACTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGEACNCC*YARLSR
Trigger: TCTGGAGAGTCTCGCATATCAACAGCAATTACAAGC...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGCAGTGTCCATTGGAATaGCTAGAACAGACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVQCPLE*LEQTGD
Trigger: ATCTCCTGTCTGTTCTAGTCATTCCAATGGACACTG...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGCCACTTTGGAGTCCTTaGAGGCAATGTGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLPLWSP*RQCATE
Trigger: TTCAGTTGCACATTGCCTGCAAGGACTCCAAAGTGG...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGATGCAGGACCAGAAATaGTTCATTGAACTCAAACAG +
Preference number: 4 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVMQDQK*FIELKQ
Trigger: CTGTTTGAGTTCAATGAAGCATTTCTGGTCCTGCAT...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092802.12
CDS-3UTR GCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGTATTGCTCGGCCTCTTaGTACAACAGCCATAAGCAA +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGEYCSAS*YNSHKQ
Trigger: TTGCTTATGGCTGTTGTAGCAAGAGGCCGAGCAATA...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGCTCGAATATGCTTATTaGTCGGCCTCTTGCTACAAC +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVLEYAY*SASCYN
Trigger: GTTGTAGCAAGAGGCCGAGCAATAAGCATATTCGAG...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGGTTAAAGCAGTGGGATaGCATATGGTCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLVKAVG*HMVWNP
Trigger: TGGGTTCCAGACCATATGGCATCCCACTGCTTTAAC...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTCAGCTTTACCAGAAATaGTTCATTGAACTCAAACAG +
Preference number: 4 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTQLYQK*FIELKQ
Trigger: CTGTTTGAGTTCAATGAAGCATTTCTGGTAAAGCTG...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAACAGCTTTACCAGAAATaGTTCATTGAACTCAAACAG +
Preference number: 4 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKQLYQK*FIELKQ
Trigger: CTGTTTGAGTTCAATGAAGCATTTCTGGTAAAGCTG...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGCACGAGTATGTGTGCTaGACCAGCTTTACCAGAAAT +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGEHEYVC*TSFTRN
Trigger: ATTTCTGGTAAAGCTGGTGCAGCACACATACTCGTG...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTAGGCTGTTCCTGGTaGGAGATACTTGCCGTAGAA +
Preference number: 4 (lower is better)
Translates to: EFNSNRMGIPISYTMICSLGCSW*EILAVE
Trigger: TTCTACGGCAAGTATCTCCCACCAGGAACAGCCTAG...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTTTTCTTCCAGGACCTTaGTGTCAGAGGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EFNSNRMGIPISYTMICSFLPGP*CQRCCS
Trigger: AGAGCAACACCTCTGACATCAAGGTCCTGGAAGAAA...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGTTCATTTTGGTCCTCTaGATTTTCCTGATGGCCACA +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGEFILVL*IFLMAT
Trigger: TGTGGCCATCAGGAAAATGCAGAGGACCAAAATGAA...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAACTATTCCGGATGGCGTaGATGTTGGCCATTCCCATA +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQLFRMA*MLAIPI
Trigger: TATGGGAATGGCCAACATCCACGCCATCCGGAATAG...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAACTTTGGCAATGGACGTaGCGAGGTATTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQLWQWT*RGIHHQ
Trigger: CTGATGATGAATACCTCGTCACGTCCATTGCCAAAG...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGAAAATGAGAACTCACTaGTCTGGCTCTGAGAAATTG +
Preference number: 4 (lower is better)
Translates to: MGIPISYTMICSLQGRGEKMRTH*SGSEKL
Trigger: CAATTTCTCAGAGCCAGATCAGTGAGTTCTCATTTT...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR TCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAAGGCAGTCTTCACTGTaGTCAGAGCCAAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQRQSSL*SEPKSS
Trigger: TGAAGACTTTGGCTCTGATCACAGTGAAGACTGCCT...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGAATGATGTCTTCGTTTaGCCAACCAGAATTCACAGT +
Preference number: 4 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVNDVFV*PTRIHS
Trigger: ACTGTGAATTCTGGTTGGCCAAACGAAGACATCATT...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTGTTACAGACGAGAACTaGGTCATAGAGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: EFNSNRMGIPISYTMICSVTDEN*VIELLI
Trigger: GATCAGCAACTCTATGACCCAGTTCTCGTCTGTAAC...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CAA 72 bp TGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTaGGGCACTGTGCACCAGGCAGTATTTATGAATCAT +
Preference number: 4 (lower is better)
Translates to: WSLVISKPFYCC*GTVHQAVFMNH
Trigger: ATGATTCATAAATACTGCCTGGTGCACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTTTCATTTTGGTCCTCTaGATTTTCCTGATGGCCACA +
Preference number: 4 (lower is better)
Translates to: EFNSNRMGIPISYTMICSFILVL*IFLMAT
Trigger: TGTGGCCATCAGGAAAATGCAGAGGACCAAAATGAA...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR GCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAACTCGAATATGCTTATTaGTCGGCCTCTTGCTACAAC +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQLEYAY*SASCYN
Trigger: GTTGTAGCAAGAGGCCGAGCAATAAGCATATTCGAG...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAATCACAGTTAAAGCAGTaGGATGCCATATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQSQLKQ*DAIWSG
Trigger: TCCAGACCATATGGCATCCCACTGCTTTAACTGTGA...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
3UTR CAA 72 bp TTGAACTGTATTGAGTTTTTACAGCACATTGCATGTTaGTCACAACGCAACTGCACAGTTTGGATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LNCIEFLQHIAC*SQRNCTVWIFG
Trigger: GCCAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAAACTCAATACAGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR GCA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGAAATCTGTGTCACATaGCTCACTGGCATCATTAGT +
Preference number: 4 (lower is better)
Translates to: NSNRMGIPISYTMICSLQEICVT*LTGIIS
Trigger: ACTAATGATGCCAGTGAGGCATGTGACACAGATTTC...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp GCCTCCACCCTTGGCCCGGTTAGCCACGGCTGCTGTGTAGGACCGTaGATCCAGGATCAGCAGTTTCTGTGGGGCTGCTGTGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ASTLGPVSHGCCVGP*IQDQQFLWGCCALH
Trigger: GTGGAGAGCACAGCAGCCCCACAGAAACTGCTGATCCTGGATGCACGGTCCTACACAGCAGCCGTGGCTAACCGGGCCAAGGGTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp CCAGGCACCACGCATGGTAGGCAAAGGCAAAGAGATCCTCGGGCTTaGCAGGTCTCGCTGTGGCCCGGCTTAGCCTTGAGAGCCACTCTT +
Preference number: 5 (lower is better)
Translates to: PGTTHGRQRQRDPRA*QVSLWPGLALRATL
Trigger: AAGAGTGGCTCTCAAGGCTAAGCCGGGCCACAGCGAGACCTGCCAAGCCCGAGGATCTCTTTGCCTTTGCCTACCATGCGTGGTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS-3UTR CAA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTAGCCCCCACTGGCCCTaGTCCCTGGGTCTAAGGCGC +
Preference number: 5 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGSPHWP*SLGLRR
Trigger: GCGCCTTAGACCCAGGGACAAGGGCCAGTGGGGGCT...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp TTCTTCACATTCACAGCCTCCACCCTTGGCCCGGTTAGCCACGGCTaGTGTGTAGGACCGTGCATCCAGGATCAGCAGTTTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: FFTFTASTLGPVSHG*CVGPCIQDQQFLWG
Trigger: GCCCCACAGAAACTGCTGATCCTGGATGCACGGTCCTACACAGCAGCCGTGGCTAACCGGGCCAAGGGTGGAGGCTGTGAATGTGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp CAGCTCGCAGGAGTGCCCACACAGAGCACGTCCGTTTATAGATGTTaGGCTTCTCTCGCTCGCAGGGGTTGTTGGCCAGGAATGTGCCGT +
Preference number: 5 (lower is better)
Translates to: QLAGVPTQSTSVYRC*ASLARRGCWPGMCR
Trigger: ACGGCACATTCCTGGCCAACAACCCCTGCGAGCGAGAGAAGCGCAACATCTATAAACGGACGTGCTCTGTGTGGGCACTCCTGCGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp TCAGGTGGCTTCCCTAAGCCATCAGAAGTCCTACCCTGCTCCTCTTaGGCTGAAGGGTCCGGGGCCAGTGCTTCAGTTTCTTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: SGGFPKPSEVLPCSS*AEGSGASASVSSRT
Trigger: GGTCCTGGAAGAAACTGAAGCACTGGCCCCGGACCCTTCAGCCCAAGAGGAGCAGGGTAGGACTTCTGATGGCTTAGGGAAGCCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp CTTGATGTGCAGCCGGTAGTTAGAGATGGCAATGAGGGCATCGGTTaGCCGGCCCAGGAATTCCACTCCCTCACCCTGCAGCACTGTGAA +
Preference number: 5 (lower is better)
Translates to: LDVQPVVRDGNEGIG*PAQEFHSLTLQHCE
Trigger: TTCACAGTGCTGCAGGGTGAGGGAGTGGAATTCCTGGGCCGGGCAACCGATGCCCTCATTGCCATCTCTAACTACCGGCTGCACATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000123105.8
ENSMUST00000134216.3
ENSMUST00000146871.8
CDS GCA 90 bp GACTCTCCAGACATTCTGCAGGTCAAAACCCATCCTTGCGAGCTCTaGCTCCTGTCGACATCGGATGTGCTCTCCTGGCTGGCACAGGTG +
Preference number: 5 (lower is better)
Translates to: DSPDILQVKTHPCEL*LLSTSDVLSWLAQV
Trigger: CACCTGTGCCAGCCAGGAGAGCACATCCGATGTCGACAGGAGGCAGAGCTCGCAAGGATGGGTTTTGACCTGCAGAATGTCTGGAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS GCA 90 bp CCACACTTGGTGGGTTGCAAAGGCTGCCCTGACTGTGATCTGGAGTaGACCTTGAGGGCGAGATCTGCATGGAGTCTAGGTGGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: PHLVGCKGCPDCDLE*TLRARSAWSLGGAV
Trigger: AACAGCCCCACCTAGACTCCATGCAGATCTCGCCCTCAAGGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp TTGGCTCTGGAGTTTGGCTGGCCACACTTGGTGGGTTGCAAAGGCTaGCCTGACTGTGATCTGGAGTGCACCTTGAGGGCGAGATCTGCA +
Preference number: 5 (lower is better)
Translates to: LALEFGWPHLVGCKG*PDCDLECTLRARSA
Trigger: TGCAGATCTCGCCCTCAAGGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp GGTCAGTATTTGGCTCTGGAGTTTGGCTGGCCACACTTGGTGGGTTaGAAAGGCTGCCCTGACTGTGATCTGGAGTGCACCTTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: GQYLALEFGWPHLVG*KGCPDCDLECTLRA
Trigger: CGCCCTCAAGGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp CAAGGCAGGGCCCTGCAGCTCGAATATGCTTATTGCTCGGCCTCTTaGTACAACAGCCATAAGCAAGCAGGCGCCGAGGAGTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: QGRALQLEYAYCSAS*YNSHKQAGAEEWSL
Trigger: GAGAGACCACTCCTCGGCGCCTGCTTGCTTATGGCTGTTGTAGCAAGAGGCCGAGCAATAAGCATATTCGAGCTGCAGGGCCCTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp TTTCATCCCTTCTCTCTGAGCCCACTGGCCCCCAAGGCAGGGCCCTaGAGCTCGAATATGCTTATTGCTCGGCCTCTTGCTACAACAGCC +
Preference number: 5 (lower is better)
Translates to: FHPFSLSPLAPKAGP*SSNMLIARPLATTA
Trigger: GGCTGTTGTAGCAAGAGGCCGAGCAATAAGCATATTCGAGCTGCAGGGCCCTGCCTTGGGGGCCAGTGGGCTCAGAGAGAAGGGATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp CGTAGAACCAGGGGGATCTTGGCTGAGGAGGTCAGTATTTGGCTCTaGAGTTTGGCTGGCCACACTTGGTGGGTTGCAAAGGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RRTRGILAEEVSIWL*SLAGHTWWVAKAAL
Trigger: CAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTCTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp GGTCTCGCTGTGGCCCGGCTTAGCCTTGAGAGCCACTCTTGGCACTaGTTGAAAGTAGAGAAGTGGCACCTCACCACTTTGGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GLAVARLSLESHSWH*LKVEKWHLTTLESL
Trigger: CAAGGACTCCAAAGTGGTGAGGTGCCACTTCTCTACTTTCAAGCAGTGCCAAGAGTGGCTCTCAAGGCTAAGCCGGGCCACAGCGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS GCA 90 bp TGTCGCCGTAGCTGTTCCACCTCTTGCCTGTACCCTGCTTCGATCTaGCGTAACCTGTGTTGGATCACATCCGTGGGAAAGGGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: CRRSCSTSCLYPASI*RNLCWITSVGKGSP
Trigger: TGGACTCCCCTTTCCCACGGATGTGATCCAACACAGGTTACGGCAGATCGAAGCAGGGTACAGGCAAGAGGTGGAACAGCTACGGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp TTGGCAGGTCTCGCTGTGGCCCGGCTTAGCCTTGAGAGCCACTCTTaGCACTGCTTGAAAGTAGAGAAGTGGCACCTCACCACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LAGLAVARLSLESHS*HCLKVEKWHLTTLE
Trigger: CTCCAAAGTGGTGAGGTGCCACTTCTCTACTTTCAAGCAGTGCCAAGAGTGGCTCTCAAGGCTAAGCCGGGCCACAGCGAGACCTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS CCA 90 bp ACTGGGCAGAGGAGGAGGAAGGCCCATTTCTCCCACAGTCAGCTGTaGGCTTCCAACTCCAGAGTCTATGACTGTCTCTGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TGQRRRKAHFSHSQL*ASNSRVYDCLCSFR
Trigger: CCTGAAGGAGCAGAGACAGTCATAGACTCTGGAGTTGGAAGCCCACAGCTGACTGTGGGAGAAATGGGCCTTCCTCCTCCTCTGCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp GCTGAGGAGGTCAGTATTTGGCTCTGGAGTTTGGCTGGCCACACTTaGTGGGTTGCAAAGGCTGCCCTGACTGTGATCTGGAGTGCACCT +
Preference number: 5 (lower is better)
Translates to: AEEVSIWLWSLAGHT*WVAKAALTVIWSAP
Trigger: AGGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp GGCTGTTCCTGGTGGGAGATACTTGCCGTAGAACCAGGGGGATCTTaGCTGAGGAGGTCAGTATTTGGCTCTGGAGTTTGGCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: GCSWWEILAVEPGGS*LRRSVFGSGVWLAT
Trigger: TGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTCTACGGCAAGTATCTCCCACCAGGAACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAGCAATGGCAGCCCCGTaGCGCAGGTGTCTGTATACC +
Preference number: 5 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQAMAAP*RRCLYT
Trigger: GGTATACAGACACCTGCGCAACGGGGCTGCCATTGC...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp AGAAACTGTTCAGGTGGCTTCCCTAAGCCATCAGAAGTCCTACCCTaGTCCTCTTGGGCTGAAGGGTCCGGGGCCAGTGCTTCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RNCSGGFPKPSEVLP*SSWAEGSGASASVS
Trigger: AGAAACTGAAGCACTGGCCCCGGACCCTTCAGCCCAAGAGGAGCAGGGTAGGACTTCTGATGGCTTAGGGAAGCCACCTGAACAGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp ACTTGCCGTAGAACCAGGGGGATCTTGGCTGAGGAGGTCAGTATTTaGCTCTGGAGTTTGGCTGGCCACACTTGGTGGGTTGCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: TCRRTRGILAEEVSI*LWSLAGHTWWVAKA
Trigger: AGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTCTACGGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp TCGGCCTCTTGCTACAACAGCCATAAGCAAGCAGGCGCCGAGGAGTaGTCTCTCCGCTTGGGAATGAAGTCATCATCCCTTGGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: SASCYNSHKQAGAEE*SLRLGMKSSSLGSC
Trigger: ACAGCTTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAGACCACTCCTCGGCGCCTGCTTGCTTATGGCTGTTGTAGCAAGAGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGAGCCCCCACTGGCCCTaGTCCCTGGGTCTAAGGCGC +
Preference number: 5 (lower is better)
Translates to: PVFEPNSTEDSANQLEGVSPHWP*SLGLRR
Trigger: GCGCCTTAGACCCAGGGACAAGGGCCAGTGGGGGCT...CACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp AGAGAGGAGGCACTGGGGAAGGGCAGCTCAGAAGAGAAGGCTTTGTaGTGGAGACTTGCTTCGGATGACTGGAAAACCACATCCGGTTGT +
Preference number: 5 (lower is better)
Translates to: REEALGKGSSEEKAL*WRLASDDWKTTSGC
Trigger: ACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTCTGAGCTGCCCTTCCCCAGTGCCTCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp GAGGAGGCACTGGGGAAGGGCAGCTCAGAAGAGAAGGCTTTGTGCTaGAGACTTGCTTCGGATGACTGGAAAACCACATCCGGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: EEALGKGSSEEKALC*RLASDDWKTTSGCS
Trigger: AGAACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTCTGAGCTGCCCTTCCCCAGTGCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp TGTACCCTGCTTCGATCTGCCGTAACCTGTGTTGGATCACATCCGTaGGAAAGGGGAGTCCATCATCATCCAGGTAGAGAGGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: CTLLRSAVTCVGSHP*ERGVHHHPGREEAL
Trigger: CAGTGCCTCCTCTCTACCTGGATGATGATGGACTCCCCTTTCCCACGGATGTGATCCAACACAGGTTACGGCAGATCGAAGCAGGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp ACGTCCGTTTATAGATGTTGCGCTTCTCTCGCTCGCAGGGGTTGTTaGCCAGGAATGTGCCGTAGAGACACGAGTATGTGTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: TSVYRCCASLARRGC*PGMCRRDTSMCAAP
Trigger: TGGTGCAGCACACATACTCGTGTCTCTACGGCACATTCCTGGCCAACAACCCCTGCGAGCGAGAGAAGCGCAACATCTATAAACGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTTGGCACCTCACCACTTaGGAGTCCTTGCAGGCAATG +
Preference number: 5 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGWHLTT*ESLQAM
Trigger: CATTGCCTGCAAGGACTCCAAAGTGGTGAGGTGCCA...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTAGCCCCCACTGGCCCTaGTCCCTGGGTCTAAGGCGC +
Preference number: 5 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTASPHWP*SLGLRR
Trigger: GCGCCTTAGACCCAGGGACAAGGGCCAGTGGGGGCT...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACTCACAGCCTCCACCCTaGGCCCGGTTAGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: PRRISQDGIFELCVHEPYSQPPP*ARLATA
Trigger: AGCCGTGGCTAACCGGGCCAAGGGTGGAGGCTGTGA...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCCGGATGGCGTGGATGTaGGCCATTCCCATAAACAAG +
Preference number: 5 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLRMAWM*AIPINK
Trigger: CTTGTTTATGGGAATGGCCAACATCCACGCCATCCG...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCGAGTGGTCTCTCCGCTaGGGAATGAAGTCATCATCC +
Preference number: 5 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLEWSLR*GMKSSS
Trigger: GGATGATGACTTCATTCCCAAGCGGAGAGACCACTC...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATTCTCGCTCGCAGGGGTaGTTGGCCAGGAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNSRSQG*LARNVP
Trigger: CGGCACATTCCTGGCCAACAACCCCTGCGAGCGAGA...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 90 bp GGAAAGGTAAAGATCCATATTTTCCTCTCCAAGGGTGCATGGAGATaGCGCAGGCAGATAAACAGCTGTCCAGAGGTGCAGGGCCCGGAC +
Preference number: 5 (lower is better)
Translates to: GKVKIHIFLSKGAWR*RRQINSCPEVQGPD
Trigger: GTCCGGGCCCTGCACCTCTGGACAGCTGTTTATCTGCCTGCGTCATCTCCATGCACCCTTGGAGAGGAAAATATGGATCTTTACCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp AGCTCAGAAGAGAAGGCTTTGTGCTGGAGACTTGCTTCGGATGACTaGAAAACCACATCCGGTTGTTCTTCCCTCCTGGGCCTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SSEEKALCWRLASDD*KTTSGCSSLLGLCS
Trigger: ACTGCACAGGCCCAGGAGGGAAGAACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCTGGCCCGGCTTAGCCTaGAGAGCCACTCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: SLMLATEPDEKCIQASICWPGLA*RATLGT
Trigger: AGTGCCAAGAGTGGCTCTCAAGGCTAAGCCGGGCCA...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTTGGCCCGGCTTAGCCTaGAGAGCCACTCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFWPGLA*RATLGT
Trigger: AGTGCCAAGAGTGGCTCTCAAGGCTAAGCCGGGCCA...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATAGGTCAAAACCCATCCTaGCGAGCTCTGCCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIGQNPS*RALPPV
Trigger: GACAGGAGGCAGAGCTCGCAAGGATGGGTTTTGACC...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCTCTAAGGCGCAGGCTTaGGCAATGGACGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFSKAQA*AMDVTR
Trigger: CCTCGTCACGTCCATTGCCAAAGCCTGCGCCTTAGA...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGTCACAGCCTCCACCCTaGGCCCGGTTAGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: AIPVFEPNSTEDSANQLESQPPP*ARLATA
Trigger: AGCCGTGGCTAACCGGGCCAAGGGTGGAGGCTGTGA...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACACAGAGCACAGAGGTGAGTGGTCTCTCCGCTaGGGAATGAAGTCATCATCC +
Preference number: 5 (lower is better)
Translates to: EGVPLKTEPSCTDTEHRGEWSLR*GMKSSS
Trigger: GGATGATGACTTCATTCCCAAGCGGAGAGACCACTC...ACCTCTGTGCTCTGTGTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTTCTCGCTCGCAGGGGTaGTTGGCCAGGAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTSRSQG*LARNVP
Trigger: CGGCACATTCCTGGCCAACAACCCCTGCGAGCGAGA...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 90 bp AAGTGGCACCTCACCACTTTGGAGTCCTTGCAGGCAATGTGCAACTaGAACATATCACGGCTTTCCACACTGTCAATCATCCGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: KWHLTTLESLQAMCN*NISRLSTLSIIRRG
Trigger: GCCCCTCCGGATGATTGACAGTGTGGAAAGCCGTGATATGTTTCAGTTGCACATTGCCTGCAAGGACTCCAAAGTGGTGAGGTGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS-3UTR CAA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAACACTCTTGGCACTGCTaGAAAGTAGAGAAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQHSWHC*KVEKWH
Trigger: GTGCCACTTCTCTACTTTCAAGCAGTGCCAAGAGTG...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TGCCAGGAGAGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAATGGCCCGGCTTAGCCTaGAGAGCCACTCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: CQERSRCSFHFSTRTTRKWPGLA*RATLGT
Trigger: AGTGCCAAGAGTGGCTCTCAAGGCTAAGCCGGGCCA...TTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCTCTCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCATCACAGCCTCCACCCTaGGCCCGGTTAGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSSQPPP*ARLATA
Trigger: AGCCGTGGCTAACCGGGCCAAGGGTGGAGGCTGTGA...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCAGTGCCGACAACCAGTaGCTGGGATCTGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: SLMLATEPDEKCIQASICSADNQ*LGSGIW
Trigger: CCAGATGCCAGATCCCAGCAACTGGTTGTCGGCACT...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATACAGGCTCCACCACACTaGCTAGAGACACTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: GHCAPGSIYESSWDLQEIQAPPH*LETLQS
Trigger: ACTCTGCAGTGTCTCTAGCAAGTGTGGTGGAGCCTG...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp CGCCGAGGAGTGGTCTCTCCGCTTGGGAATGAAGTCATCATCCCTTaGAAGCTGTCCCAGTTTGACCCTAAAAATGAGAACTCACTGATC +
Preference number: 5 (lower is better)
Translates to: RRGVVSPLGNEVIIP*KLSQFDPKNENSLI
Trigger: GATCAGTGAGTTCTCATTTTTAGGGTCAAACTGGGACAGCTTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAGACCACTCCTCGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp TTGCTTCGGATGACTGGAAAACCACATCCGGTTGTTCTTCCCTCCTaGGCCTGTGCAGTGTCCATTGGAATGACTAGAACAGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: LLRMTGKPHPVVLPS*ACAVSIGMTRTDRR
Trigger: TCTCCTGTCTGTTCTAGTCATTCCAATGGACACTGCACAGGCCCAGGAGGGAAGAACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp TGTCTTCGTTTGGCCAACCAGAATTCACAGTCACAGTTAAAGCAGTaGGATGCCATATGGTCTGGAACCCAGCGAGTCACCTCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: CLRLANQNSQSQLKQ*DAIWSGTQRVTSVS
Trigger: GGAGACTGAGGTGACTCGCTGGGTTCCAGACCATATGGCATCCCACTGCTTTAACTGTGACTGTGAATTCTGGTTGGCCAAACGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTGAACAGATCCTTGGCTaGGATGTACTCCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSEQILG*DVLQAG
Trigger: CCCAGCCTGGAGTACATCCAAGCCAAGGATCTGTTC...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGGCACCTCACCACTTaGGAGTCCTTGCAGGCAATG +
Preference number: 5 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLWHLTT*ESLQAM
Trigger: CATTGCCTGCAAGGACTCCAAAGTGGTGAGGTGCCA...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGAGCAATGGCAGCCCCGTaGCGCAGGTGTCTGTATACC +
Preference number: 5 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGAMAAP*RRCLYT
Trigger: GGTATACAGACACCTGCGCAACGGGGCTGCCATTGC...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CACATCATGTCACTTACACCCACAACAGCTCTAAAAGGATGCACACATCTGAGCTCTAAGGCGCAGGCTTaGGCAATGGACGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: HIMSLTPTTALKGCTHLSSKAQA*AMDVTR
Trigger: CCTCGTCACGTCCATTGCCAAAGCCTGCGCCTTAGA...GCTCAGATGTGTGCATCCTTTTAGAGCTGTTGTGGGTGTAAGTGACATGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATAAGTGCTGCAGCCATTaGGTACTCTCCAGTGCCGAC +
Preference number: 5 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNKCCSH*VLSSAD
Trigger: GTCGGCACTGGAGAGTACCAAATGGCTGCAGCACTT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCAAGTGCTGCAGCCATTaGGTACTCTCCAGTGCCGAC +
Preference number: 5 (lower is better)
Translates to: SLMLATEPDEKCIQASICKCCSH*VLSSAD
Trigger: GTCGGCACTGGAGAGTACCAAATGGCTGCAGCACTT...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCCAGCGGTCTCCAAACTaGTGTCCGAAATCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFQRSPN*CPKSSQ
Trigger: TTGGCTGGATTTCGGACACAAGTTTGGAGACCGCTG...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CAACTCAGTGTGAAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAACCAGAAATGCTTCATaGAACTCAAACAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: QLSVKLPDSGSRSGPSPQTRNAS*NSNRQG
Trigger: CCCCTGCCTGTTTGAGTTCAATGAAGCATTTCTGGT...TTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTTCACACTGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AGTGTAGCTAGGAAGTCCTATAAGCCAAGGAGACTGTATCTGTCCCAACCACAGCAGGCTCCACCACACTaGCTAGAGACACTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: SVARKSYKPRRLYLSQPQQAPPH*LETLQS
Trigger: ACTCTGCAGTGTCTCTAGCAAGTGTGGTGGAGCCTG...CTGTGGTTGGGACAGATACAGTCTCCTTGGCTTATAGGACTTCCTAGCTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp GGGCACTGTGCACCAGGCAGTATTTATGAATCATCTTGGGACCTCCAGGAGATATCTGGCTCTGAGAAATaGGCTTTCGGGCCAACTCCA +
Preference number: 5 (lower is better)
Translates to: GHCAPGSIYESSWDLQEISGSEK*AFGPTP
Trigger: TGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAGA...TATCTCCTGGAGGTCCCAAGATGATTCATAAATACTGCCTGGTGCACAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCGGGTTTCTTCAGATGTaGGCTCATGAGTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFGFLQM*AHEFPG
Trigger: GCCAGGGAACTCATGAGCCAACATCTGAAGAAACCC...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp TCGTTTGGCCAACCAGAATTCACAGTCACAGTTAAAGCAGTGGGATaGCATATGGTCTGGAACCCAGCGAGTCACCTCAGTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SFGQPEFTVTVKAVG*HMVWNPASHLSLLL
Trigger: AAGAAGGAGACTGAGGTGACTCGCTGGGTTCCAGACCATATGGCATCCCACTGCTTTAACTGTGACTGTGAATTCTGGTTGGCCAAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp CCACGTCTGAACCAGGTGTATAGAGGAAGTTATGAAAGTTCTTGTTaGCAGCTCGCAGGAGTGCCCACACAGAGCACGTCCGTTTATAGA +
Preference number: 5 (lower is better)
Translates to: PRLNQVYRGSYESSC*QLAGVPTQSTSVYR
Trigger: TCTATAAACGGACGTGCTCTGTGTGGGCACTCCTGCGAGCTGGCAACAAGAACTTTCATAACTTCCTCTATACACCTGGTTCAGACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 90 bp GCCAACCAGAATTCACAGTCACAGTTAAAGCAGTGGGATGCCATATaGTCTGGAACCCAGCGAGTCACCTCAGTCTCCTTCTTATCAACG +
Preference number: 5 (lower is better)
Translates to: ANQNSQSQLKQWDAI*SGTQRVTSVSFLST
Trigger: CGTTGATAAGAAGGAGACTGAGGTGACTCGCTGGGTTCCAGACCATATGGCATCCCACTGCTTTAACTGTGACTGTGAATTCTGGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAACAGATCCTTGGCTaGGATGTACTCCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTEQILG*DVLQAG
Trigger: CCCAGCCTGGAGTACATCCAAGCCAAGGATCTGTTC...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACGAACAGATCCTTGGCTaGGATGTACTCCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PRRISQDGIFELCVHEPYEQILG*DVLQAG
Trigger: CCCAGCCTGGAGTACATCCAAGCCAAGGATCTGTTC...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATATCCGGAGGGGCACGTaGATGACAGAGTCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNIRRGT*MTESLN
Trigger: GTTCAAAGACTCTGTCATCAACGTGCCCCTCCGGAT...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCCACTCTTGGCACTGCTaGAAAGTAGAGAAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFHSWHC*KVEKWH
Trigger: GTGCCACTTCTCTACTTTCAAGCAGTGCCAAGAGTG...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGATCTAAGGCGCAGGCTTaGGCAATGGACGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGSKAQA*AMDVTR
Trigger: CCTCGTCACGTCCATTGCCAAAGCCTGCGCCTTAGA...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTCGGATGGCGTGGATGTaGGCCATTCCCATAAACAAG +
Preference number: 5 (lower is better)
Translates to: NSSAPVTWYQGGFLKTVSRMAWM*AIPINK
Trigger: CTTGTTTATGGGAATGGCCAACATCCACGCCATCCG...AGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTCGGATGGCGTGGATGTaGGCCATTCCCATAAACAAG +
Preference number: 5 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLRMAWM*AIPINK
Trigger: CTTGTTTATGGGAATGGCCAACATCCACGCCATCCG...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AACTGCACAGTTTGGATTTTTGGCCACATCATGTCACTTACACCCACAACAGCTAGTGCCGACAACCAGTaGCTGGGATCTGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: NCTVWIFGHIMSLTPTTASADNQ*LGSGIW
Trigger: CCAGATGCCAGATCCCAGCAACTGGTTGTCGGCACT...AGCTGTTGTGGGTGTAAGTGACATGATGTGGCCAAAAATCCAAACTGTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGAGTGCCGACAACCAGTaGCTGGGATCTGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: AIPVFEPNSTEDSANQLESADNQ*LGSGIW
Trigger: CCAGATGCCAGATCCCAGCAACTGGTTGTCGGCACT...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AAGCTTCCAGACTCTGGGTCTAGGTCAGGACCATCACCCCAAAGTGAGGGTCTCCCCTTGAAAGGTTTATaGCTCAAGTACTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: KLPDSGSRSGPSPQSEGLPLKGL*LKYSFW
Trigger: CCAGAAAGAGTACTTGAGCAATAAACCTTTCAAGGG...GAGACCCTCACTTTGGGGTGATGGTCCTGACCTAGACCCAGAGTCTGGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGATTTGGCTCTGGAGTTaGGCTGGCCACACTTGGTGG +
Preference number: 5 (lower is better)
Translates to: PVFEPNSTEDSANQLEGVIWLWS*AGHTWW
Trigger: CCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAAT...CACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTGAGTGGTCTCTCCGCTaGGGAATGAAGTCATCATCC +
Preference number: 5 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLEWSLR*GMKSSS
Trigger: GGATGATGACTTCATTCCCAAGCGGAGAGACCACTC...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAAAACCACATCCGGTaGTTCTTCCCTCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTENHIR*FFPPGP
Trigger: AGGCCCAGGAGGGAAGAACAACCGGATGTGGTTTTC...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCAACGGGTTCCCAGCTaGCTTCTGAAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFQRVPS*LLKGSL
Trigger: AAGACTGCCTTTCAGAAGCAAGCTGGGAACCCGTTG...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTGGGTTTCTTCAGATGTaGGCTCATGAGTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFGFLQM*AHEFPG
Trigger: GCCAGGGAACTCATGAGCCAACATCTGAAGAAACCC...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 90 bp TCCCTTGGAAGCTGTCCCAGTTTGACCCTAAAAATGAGAACTCACTaGTCTGGCTCTGAGAAATTGGCTTTCGGGCCAACTCCAATGGCA +
Preference number: 5 (lower is better)
Translates to: SLGSCPSLTLKMRTH*SGSEKLAFGPTPMA
Trigger: TGCCATTGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAGATCAGTGAGTTCTCATTTTTAGGGTCAAACTGGGACAGCTTCCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 90 bp TGTATAGAGGAAGTTATGAAAGTTCTTGTTGCCAGCTCGCAGGAGTaGCCACACAGAGCACGTCCGTTTATAGATGTTGCGCTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: CIEEVMKVLVASSQE*PHRARPFIDVALLS
Trigger: CGAGAGAAGCGCAACATCTATAAACGGACGTGCTCTGTGTGGGCACTCCTGCGAGCTGGCAACAAGAACTTTCATAACTTCCTCTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCAGGTCAAAACCCATCCTaGCGAGCTCTGCCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSGQNPS*RALPPV
Trigger: GACAGGAGGCAGAGCTCGCAAGGATGGGTTTTGACC...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCAGCGGTCTCCAAACTaGTGTCCGAAATCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFQRSPN*CPKSSQ
Trigger: TTGGCTGGATTTCGGACACAAGTTTGGAGACCGCTG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCTTGATGTCAGAGGTGTaGCTCTTCATTTCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFLMSEV*LFISQD
Trigger: GTCCTGGGAAATGAAGAGCAACACCTCTGACATCAA...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGGAAAACCACATCCGGTaGTTCTTCCCTCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVENHIR*FFPPGP
Trigger: AGGCCCAGGAGGGAAGAACAACCGGATGTGGTTTTC...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTGAAAACCACATCCGGTaGTTCTTCCCTCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSENHIR*FFPPGP
Trigger: AGGCCCAGGAGGGAAGAACAACCGGATGTGGTTTTC...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCAACGGGTTCCCAGCTaGCTTCTGAAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFQRVPS*LLKGSL
Trigger: AAGACTGCCTTTCAGAAGCAAGCTGGGAACCCGTTG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CTCCTGCCAAATTCAAATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTAACTGGGTCATAGAGTaGCTGATCAGGAATGGGCAG +
Preference number: 5 (lower is better)
Translates to: LLPNSNSSAPVTWYQGGFNWVIE*LIRNGQ
Trigger: CTGCCCATTCCTGATCAGCAACTCTATGACCCAGTT...AAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAATTTGAATTTGGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCTGCTTGATGACAGAGTCTTaGAACTTGATGTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SLMLATEPDEKCIQASICLMTES*NLMCSR
Trigger: CCGGCTGCACATCAAGTTCAAAGACTCTGTCATCAA...GCAGATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTTTGATGACAGAGTCTTaGAACTTGATGTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SGHMVPRRISQDGIFELCLMTES*NLMCSR
Trigger: CCGGCTGCACATCAAGTTCAAAGACTCTGTCATCAA...ACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AGATCAAGGTGTAGCTTCCATTTTAGCACCAGGACAACTAGGAAAAGTCAGGTGATCCGGAGGGGCACGTaGATGACAGAGTCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: RSRCSFHFSTRTTRKSQVIRRGT*MTESLN
Trigger: GTTCAAAGACTCTGTCATCAACGTGCCCCTCCGGAT...CACCTGACTTTTCCTAGTTGTCCTGGTGCTAAAATGGAAGCTACACCTTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTTGGCACCTCACCACTTaGGAGTCCTTGCAGGCAATG +
Preference number: 5 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGWHLTT*ESLQAM
Trigger: CATTGCCTGCAAGGACTCCAAAGTGGTGAGGTGCCA...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCACTCTTGGCACTGCTaGAAAGTAGAGAAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFHSWHC*KVEKWH
Trigger: GTGCCACTTCTCTACTTTCAAGCAGTGCCAAGAGTG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACCATCACCCCAAAGTGAGGGTCTCTCCAGTAGAAAAAGCTCCTGCCAAATTCAGGACACTGTTCATTTaGGTCCTCTGCATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: DHHPKVRVSPVEKAPAKFRTLFI*VLCIFL
Trigger: CAGGAAAATGCAGAGGACCAAAATGAACAGTGTCCT...GAATTTGGCAGGAGCTTTTTCTACTGGAGAGACCCTCACTTTGGGGTGATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TTCCCTTCTCATTCTTCACAGTGCGTCCCTCAAAAGCAGCCACTGCATAACAGTTTGATGTCAGAGGTGTaGCTCTTCATTTCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: FPSHSSQCVPQKQPLHNSLMSEV*LFISQD
Trigger: GTCCTGGGAAATGAAGAGCAACACCTCTGACATCAA...ACTGTTATGCAGTGGCTGCTTTTGAGGGACGCACTGTGAAGAATGAGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTGTTTCTTCCAGGACCTaGATGTCAGAGGTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECVSSRT*MSEVLL
Trigger: GAGCAACACCTCTGACATCAAGGTCCTGGAAGAAAC...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCACAGGCTCCACCACACTaGCTAGAGACACTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSQAPPH*LETLQS
Trigger: ACTCTGCAGTGTCTCTAGCAAGTGTGGTGGAGCCTG...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTATTTGGCTCTGGAGTTaGGCTGGCCACACTTGGTGG +
Preference number: 5 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVIWLWS*AGHTWW
Trigger: CCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAAT...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ACCAGGACAACTAGGAAAAGTCAGGTGCAAAGGGTAGGGCACAATCAGCAGAATCTTTGTGCTGGAGACTaGCTTCGGATGACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: TRTTRKSQVQRVGHNQQNLCAGD*LRMTGK
Trigger: TTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAG...ATTCTGCTGATTGTGCCCTACCCTTTGCACCTGACTTTTCCTAGTTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ATTCCTCTGCTCCGGTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTCTTTGTGCTGGAGACTaGCTTCGGATGACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: IPLLRSHGTKEDFSRRYLLCAGD*LRMTGK
Trigger: TTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAG...AAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGACCGGAGCAGAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTAACTGGGTCATAGAGTaGCTGATCAGGAATGGGCAG +
Preference number: 5 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTNWVIE*LIRNGQ
Trigger: CTGCCCATTCCTGATCAGCAACTCTATGACCCAGTT...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTGGGTTTCTTCAGATGTaGGCTCATGAGTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSGFLQM*AHEFPG
Trigger: GCCAGGGAACTCATGAGCCAACATCTGAAGAAACCC...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTGGATCCAGTAGTATTTaGGCCAGGGCTACAATCTGT +
Preference number: 5 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECGSSSI*ARATIC
Trigger: ACAGATTGTAGCCCTGGCCAAAATACTACTGGATCC...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp CCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGGATCCAGTAGTATTTaGGCCAGGGCTACAATCTGT +
Preference number: 5 (lower is better)
Translates to: PNSTEDSANQLEGVPLKTGSSSI*ARATIC
Trigger: ACAGATTGTAGCCCTGGCCAAAATACTACTGGATCC...AGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CAGCCCAGAATAACTGGTTCTCACAAGACTAAGCATTACCAGAGTTCTTCTGTTCAGCGGTCTCCAAACTaGTGTCCGAAATCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: QPRITGSHKTKHYQSSSVQRSPN*CPKSSQ
Trigger: TTGGCTGGATTTCGGACACAAGTTTGGAGACCGCTG...AACAGAAGAACTCTGGTAATGCTTAGTCTTGTGAGAACCAGTTATTCTGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AGTGCTAATCAACTAGAGGGAGTGCCTCTAAAGACTGAGCCTTCATGCACAGACAGGACACTGTTCATTTaGGTCCTCTGCATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: SANQLEGVPLKTEPSCTDRTLFI*VLCIFL
Trigger: CAGGAAAATGCAGAGGACCAAAATGAACAGTGTCCT...GTCTGTGCATGAAGGCTCAGTCTTTAGAGGCACTCCCTCTAGTTGATTAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp CCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCATGAGCCATACTTGATGTCAGAGGTGTaGCTCTTCATTTCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PRRISQDGIFELCVHEPYLMSEV*LFISQD
Trigger: GTCCTGGGAAATGAAGAGCAACACCTCTGACATCAA...GTATGGCTCATGAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ACCTTCCAGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGAGTTTCTTCCAGGACCTaGATGTCAGAGGTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: TFQTTPEADPPFKSAKNGVSSRT*MSEVLL
Trigger: GAGCAACACCTCTGACATCAAGGTCCTGGAAGAAAC...TCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCTGGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGATTTGGCTCTGGAGTTaGGCTGGCCACACTTGGTGG +
Preference number: 5 (lower is better)
Translates to: MGIPISYTMICSLQGRGEIWLWS*AGHTWW
Trigger: CCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAAT...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTCCCCGAATGTTTCTTACTTCCTCTCTaGCCAGCATCCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DSPSKQSHKVDRYSLPECFLLPL*PASSFL
Trigger: CAAGAAGGAGGATGCTGGCAAGAGAGGAAGTAAGAA...ACATTCGGGGAGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp TGTTCACTGATGCTAGCCACTGAGCCTGATGAAAAATGCATCCAAGCCTCTATCCTTTGTGCTGGAGACTaGCTTCGGATGACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: CSLMLATEPDEKCIQASILCAGD*LRMTGK
Trigger: TTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAG...GATAGAGGCTTGGATGCATTTTTCATCAGGCTCAGTGGCTAGCATCAGTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGAACTGGGTCATAGAGTaGCTGATCAGGAATGGGCAG +
Preference number: 5 (lower is better)
Translates to: AIPVFEPNSTEDSANQLENWVIE*LIRNGQ
Trigger: CTGCCCATTCCTGATCAGCAACTCTATGACCCAGTT...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 90 bp CTGTCCCAGTTTGACCCTAAAAATGAGAACTCACTGATCTGGCTCTaGGAAATTGGCTTTCGGGCCAACTCCAATGGCATTTTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LSQFDPKNENSLIWL*EIGFRANSNGIFPK
Trigger: CTTTGGAAAAATGCCATTGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAGATCAGTGAGTTCTCATTTTTAGGGTCAAACTGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGATCCGGAGGGGCACGTaGATGACAGAGTCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: MGIPISYTMICSLQGRGEIRRGT*MTESLN
Trigger: GTTCAAAGACTCTGTCATCAACGTGCCCCTCCGGAT...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGCAATGGCAGCCCCGTaGCGCAGGTGTCTGTATACC +
Preference number: 5 (lower is better)
Translates to: NSNRMGIPISYTMICSLQAMAAP*RRCLYT
Trigger: GGTATACAGACACCTGCGCAACGGGGCTGCCATTGC...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGAAGTGCTGCAGCCATTaGGTACTCTCCAGTGCCGAC +
Preference number: 5 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLKCCSH*VLSSAD
Trigger: GTCGGCACTGGAGAGTACCAAATGGCTGCAGCACTT...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp TCACTGATGGGACAGTCCCTCAAAACAGTCACACAAAGTAGACAGATACAGTCTACCAGAAATGCTTCATaGAACTCAAACAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SLMGQSLKTVTQSRQIQSTRNAS*NSNRQG
Trigger: CCCCTGCCTGTTTGAGTTCAATGAAGCATTTCTGGT...AGACTGTATCTGTCTACTTTGTGTGACTGTTTTGAGGGACTGTCCCATCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp ATCACTTGGAGTTTGGTTATAAGTAAGCCTTTCTATTGCTGTTTGGGCACTGTGTCTGGCTCTGAGAAATaGGCTTTCGGGCCAACTCCA +
Preference number: 5 (lower is better)
Translates to: ITWSLVISKPFYCCLGTVSGSEK*AFGPTP
Trigger: TGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAGA...CACAGTGCCCAAACAGCAATAGAAAGGCTTACTTATAACCAAACTCCAAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGTCTGGCTCTGAGAAATaGGCTTTCGGGCCAACTCCA +
Preference number: 5 (lower is better)
Translates to: MGIPISYTMICSLQGRGESGSEK*AFGPTP
Trigger: TGGAGTTGGCCCGAAAGCCAATTTCTCAGAGCCAGA...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 90 bp GCTCATGAGTTCCCTGGCACGAGATACTTGAATGTGTTCATAACATaGGTTACAGACGAGAACTGGGTCATAGAGTTGCTGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: AHEFPGTRYLNVFIT*VTDENWVIELLIRN
Trigger: ATTCCTGATCAGCAACTCTATGACCCAGTTCTCGTCTGTAACTCATGTTATGAACACATTCAAGTATCTCGTGCCAGGGAACTCATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTCAAAACCCATCCTaGCGAGCTCTGCCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: NSNRMGIPISYTMICSLQGQNPS*RALPPV
Trigger: GACAGGAGGCAGAGCTCGCAAGGATGGGTTTTGACC...TTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTGGATCCAGTAGTATTTaGGCCAGGGCTACAATCTGT +
Preference number: 5 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGGSSSI*ARATIC
Trigger: ACAGATTGTAGCCCTGGCCAAAATACTACTGGATCC...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCAACCAGAAATGCTTCATaGAACTCAAACAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSTRNAS*NSNRQG
Trigger: CCCCTGCCTGTTTGAGTTCAATGAAGCATTTCTGGT...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GTCACATGGTACCAAGGAGGATTTCTCAAGACGGTATCTTTGAGCTCTGTGTTCCCCTTGAAAGGTTTATaGCTCAAGTACTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VTWYQGGFLKTVSLSSVFPLKGL*LKYSFW
Trigger: CCAGAAAGAGTACTTGAGCAATAAACCTTTCAAGGG...GAACACAGAGCTCAAAGATACCGTCTTGAGAAATCCTCCTTGGTACCATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GCCATACCAGTCTTTGAACCAAACTCCACAGAAGACAGTGCTAATCAACTAGAGGGAAGCTGTCCCAGTTaGACCCTAAAAATGAGAACT +
Preference number: 5 (lower is better)
Translates to: AIPVFEPNSTEDSANQLEGSCPS*TLKMRT
Trigger: AGTTCTCATTTTTAGGGTCAAACTGGGACAGCTTCC...CTCTAGTTGATTAGCACTGTCTTCTGTGGAGTTTGGTTCAAAGACTGGTATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGCAACGGGTTCCCAGCTaGCTTCTGAAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLQRVPS*LLKGSL
Trigger: AAGACTGCCTTTCAGAAGCAAGCTGGGAACCCGTTG...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp GAGACTGTATCTGTCCCAACCACAGTACATGGCTATGTTACTGTATCTTTTGGTAGGACACTGTTCATTTaGGTCCTCTGCATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ETVSVPTTVHGYVTVSFGRTLFI*VLCIFL
Trigger: CAGGAAAATGCAGAGGACCAAAATGAACAGTGTCCT...ACCAAAAGATACAGTAACATAGCCATGTACTGTGGTTGGGACAGATACAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp ATGGGAATTCCTATCTCATATACTATGATCTGCTCTCTTCAAGGTAGAGGAGAGTTCTTACTTCCTCTCTaGCCAGCATCCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: MGIPISYTMICSLQGRGEFLLPL*PASSFL
Trigger: CAAGAAGGAGGATGCTGGCAAGAGAGGAAGTAAGAA...CTCTCCTCTACCTTGAAGAGAGCAGATCATAGTATATGAGATAGGAATTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp AGACTACACCTGAAGCAGATCCTCCCTTCAAATCTGCTAAAAATGGACAGATCACCCTTGAAAGGTTTATaGCTCAAGTACTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RLHLKQILPSNLLKMDRSPLKGL*LKYSFW
Trigger: CCAGAAAGAGTACTTGAGCAATAAACCTTTCAAGGG...TGATCTGTCCATTTTTAGCAGATTTGAAGGGAGGATCTGCTTCAGGTGTAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTGTTTCTTCCAGGACCTaGATGTCAGAGGTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: EFNSNRMGIPISYTMICSVSSRT*MSEVLL
Trigger: GAGCAACACCTCTGACATCAAGGTCCTGGAAGAAAC...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS-3UTR CAA 90 bp TTTTACAGCACATTGCATGTTTGTCACAACGCAACTGCACAGTTTGGATTTTTGGGAAGCTGTCCCAGTTaGACCCTAAAAATGAGAACT +
Preference number: 5 (lower is better)
Translates to: FYSTLHVCHNATAQFGFLGSCPS*TLKMRT
Trigger: AGTTCTCATTTTTAGGGTCAAACTGGGACAGCTTCC...CAAAAATCCAAACTGTGCAGTTGCGTTGTGACAAACATGCAATGTGCTGTAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
CDS-3UTR CAA 90 bp GAGTTCAACTCAAATAGGATGGGAATTCCTATCTCATATACTATGATCTGCTCTGGAAGCTGTCCCAGTTaGACCCTAAAAATGAGAACT +
Preference number: 5 (lower is better)
Translates to: EFNSNRMGIPISYTMICSGSCPS*TLKMRT
Trigger: AGTTCTCATTTTTAGGGTCAAACTGGGACAGCTTCC...AGAGCAGATCATAGTATATGAGATAGGAATTCCCATCCTATTTGAGTTGAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp CGGATGTGCTCTCCTGGCTGGCACAGGTGGGTATGCTaGTCCTCCTCGGTCAGCCCCAGGCACCACGCATGG +
Preference number: 6 (lower is better)
Translates to: RMCSPGWHRWVC*SSSVSPRHHAW
Trigger: CCATGCGTGGTGCCTGGGGCTGACCGAGGAGGACCAGCATACCCACCTGTGCCAGCCAGGAGAGCACATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS GCA 72 bp CATCGGATGTGCTCTCCTGGCTGGCACAGGTGGGTATaGTGGTCCTCCTCGGTCAGCCCCAGGCACCACGCA +
Preference number: 6 (lower is better)
Translates to: HRMCSPGWHRWV*WSSSVSPRHHA
Trigger: TGCGTGGTGCCTGGGGCTGACCGAGGAGGACCAGCATACCCACCTGTGCCAGCCAGGAGAGCACATCCGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS CCA 72 bp TGTCGACATCGGATGTGCTCTCCTGGCTGGCACAGGTaGGTATGCTGGTCCTCCTCGGTCAGCCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: CRHRMCSPGWHR*VCWSSSVSPRH
Trigger: GTGCCTGGGGCTGACCGAGGAGGACCAGCATACCCACCTGTGCCAGCCAGGAGAGCACATCCGATGTCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS GCA 72 bp CAGCCGGTAGTTAGAGATGGCAATGAGGGCATCGGTTaGCCGGCCCAGGAATTCCACTCCCTCACCCTGCAG +
Preference number: 6 (lower is better)
Translates to: QPVVRDGNEGIG*PAQEFHSLTLQ
Trigger: CTGCAGGGTGAGGGAGTGGAATTCCTGGGCCGGGCAACCGATGCCCTCATTGCCATCTCTAACTACCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000123105.8
ENSMUST00000134216.3
ENSMUST00000146871.8
CDS GCA 72 bp CTTGGCCCGGTTAGCCACGGCTGCTGTGTAGGACCGTaGATCCAGGATCAGCAGTTTCTGTGGGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: LGPVSHGCCVGP*IQDQQFLWGCC
Trigger: ACAGCAGCCCCACAGAAACTGCTGATCCTGGATGCACGGTCCTACACAGCAGCCGTGGCTAACCGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp TCAGGTGGCTTCCCTAAGCCATCAGAAGTCCTACCCTaGTCCTCTTGGGCTGAAGGGTCCGGGGCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: SGGFPKPSEVLP*SSWAEGSGASA
Trigger: AGCACTGGCCCCGGACCCTTCAGCCCAAGAGGAGCAGGGTAGGACTTCTGATGGCTTAGGGAAGCCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp AGGCAAAGAGATCCTCGGGCTTGGCAGGTCTCGCTGTaGCCCGGCTTAGCCTTGAGAGCCACTCTTGGCACT +
Preference number: 6 (lower is better)
Translates to: RQRDPRAWQVSL*PGLALRATLGT
Trigger: AGTGCCAAGAGTGGCTCTCAAGGCTAAGCCGGGCCACAGCGAGACCTGCCAAGCCCGAGGATCTCTTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS CAA 90 bp AGGGAGCCCCCACTGGCCCTTGTCCCTGGGTCTAAGGCGCAGGCTTaGGCAATGGACGTGACGAGGTATTCATCATCAGCATTGCGCCAG +
Preference number: 6 (lower is better)
Translates to: REPPLALVPGSKAQA*AMDVTRYSSSALRQ
Trigger: CTGGCGCAATGCTGATGATGAATACCTCGTCACGTCCATTGCCAAAGCCTGCGCCTTAGACCCAGGGACAAGGGCCAGTGGGGGCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp TTCACAGCCTCCACCCTTGGCCCGGTTAGCCACGGCTaGTGTGTAGGACCGTGCATCCAGGATCAGCAGTTT +
Preference number: 6 (lower is better)
Translates to: FTASTLGPVSHG*CVGPCIQDQQF
Trigger: AAACTGCTGATCCTGGATGCACGGTCCTACACAGCAGCCGTGGCTAACCGGGCCAAGGGTGGAGGCTGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp TTCTCTCTGAGCCCACTGGCCCCCAAGGCAGGGCCCTaGAGCTCGAATATGCTTATTGCTCGGCCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: FSLSPLAPKAGP*SSNMLIARPLA
Trigger: AGCAAGAGGCCGAGCAATAAGCATATTCGAGCTGCAGGGCCCTGCCTTGGGGGCCAGTGGGCTCAGAGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp ACGCATGGTAGGCAAAGGCAAAGAGATCCTCGGGCTTaGCAGGTCTCGCTGTGGCCCGGCTTAGCCTTGAGA +
Preference number: 6 (lower is better)
Translates to: THGRQRQRDPRA*QVSLWPGLALR
Trigger: TCTCAAGGCTAAGCCGGGCCACAGCGAGACCTGCCAAGCCCGAGGATCTCTTTGCCTTTGCCTACCATGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS CAA 90 bp TTGGTGGGTTGCAAAGGCTGCCCTGACTGTGATCTGGAGTGCACCTaGAGGGCGAGATCTGCATGGAGTCTAGGTGGGGCTGTTGGGGAG +
Preference number: 6 (lower is better)
Translates to: LVGCKGCPDCDLECT*RARSAWSLGGAVGE
Trigger: CTCCCCAACAGCCCCACCTAGACTCCATGCAGATCTCGCCCTCAAGGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 90 bp ACCAGGGGGATCTTGGCTGAGGAGGTCAGTATTTGGCTCTGGAGTTaGGCTGGCCACACTTGGTGGGTTGCAAAGGCTGCCCTGACTGTG +
Preference number: 6 (lower is better)
Translates to: TRGILAEEVSIWLWS*AGHTWWVAKAALTV
Trigger: CACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 72 bp TCCCTGGGTCTAAGGCGCAGGCTTTGGCAATGGACGTaGCGAGGTATTCATCATCAGCATTGCGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SLGLRRRLWQWT*RGIHHQHCASP
Trigger: GGGGCTGGCGCAATGCTGATGATGAATACCTCGTCACGTCCATTGCCAAAGCCTGCGCCTTAGACCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp CTGTGGGCTTCCAACTCCAGAGTCTATGACTGTCTCTaGTCCTTCAGGACTGCTGTGCCAGGGCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LWASNSRVYDCL*SFRTAVPGLQA
Trigger: AGCCTGGAGCCCTGGCACAGCAGTCCTGAAGGAGCAGAGACAGTCATAGACTCTGGAGTTGGAAGCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp TTGGCTCTGGAGTTTGGCTGGCCACACTTGGTGGGTTaGAAAGGCTGCCCTGACTGTGATCTGGAGTGCACC +
Preference number: 6 (lower is better)
Translates to: LALEFGWPHLVG*KGCPDCDLECT
Trigger: GGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp GGAGTGCCCACACAGAGCACGTCCGTTTATAGATGTTaGGCTTCTCTCGCTCGCAGGGGTTGTTGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: GVPTQSTSVYRC*ASLARRGCWPG
Trigger: TCCTGGCCAACAACCCCTGCGAGCGAGAGAAGCGCAACATCTATAAACGGACGTGCTCTGTGTGGGCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp CTCGCTGTGGCCCGGCTTAGCCTTGAGAGCCACTCTTaGCACTGCTTGAAAGTAGAGAAGTGGCACCTCACC +
Preference number: 6 (lower is better)
Translates to: LAVARLSLESHS*HCLKVEKWHLT
Trigger: GGTGAGGTGCCACTTCTCTACTTTCAAGCAGTGCCAAGAGTGGCTCTCAAGGCTAAGCCGGGCCACAGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS CAA 72 bp TGCAAAGGCTGCCCTGACTGTGATCTGGAGTGCACCTaGAGGGCGAGATCTGCATGGAGTCTAGGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: CKGCPDCDLECT*RARSAWSLGGA
Trigger: AGCCCCACCTAGACTCCATGCAGATCTCGCCCTCAAGGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 90 bp AGGCTGTTCCTGGTGGGAGATACTTGCCGTAGAACCAGGGGGATCTaGGCTGAGGAGGTCAGTATTTGGCTCTGGAGTTTGGCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: RLFLVGDTCRRTRGI*AEEVSIWLWSLAGH
Trigger: GTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTCTACGGCAAGTATCTCCCACCAGGAACAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp GACATTCTGCAGGTCAAAACCCATCCTTGCGAGCTCTaGCTCCTGTCGACATCGGATGTGCTCTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: DILQVKTHPCEL*LLSTSDVLSWL
Trigger: CAGCCAGGAGAGCACATCCGATGTCGACAGGAGGCAGAGCTCGCAAGGATGGGTTTTGACCTGCAGAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
CDS GCA 72 bp GTGGGTTGCAAAGGCTGCCCTGACTGTGATCTGGAGTaGACCTTGAGGGCGAGATCTGCATGGAGTCTAGGT +
Preference number: 6 (lower is better)
Translates to: VGCKGCPDCDLE*TLRARSAWSLG
Trigger: ACCTAGACTCCATGCAGATCTCGCCCTCAAGGTGCACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp GCCCTGCAGCTCGAATATGCTTATTGCTCGGCCTCTTaGTACAACAGCCATAAGCAAGCAGGCGCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: ALQLEYAYCSAS*YNSHKQAGAEE
Trigger: CTCCTCGGCGCCTGCTTGCTTATGGCTGTTGTAGCAAGAGGCCGAGCAATAAGCATATTCGAGCTGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp GGATCTGGCATCTGGCTACACACAGCCCGGAGGTACTaGAAGCTATTCCGGATGGCGTGGATGTTGGCCATT +
Preference number: 6 (lower is better)
Translates to: GSGIWLHTARRY*KLFRMAWMLAI
Trigger: AATGGCCAACATCCACGCCATCCGGAATAGCTTCCAGTACCTCCGGGCTGTGTGTAGCCAGATGCCAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TCCAGTGCCGACAACCAGTTGCTGGGATCTGGCATCTaGCTACACACAGCCCGGAGGTACTGGAAGCTATTC +
Preference number: 6 (lower is better)
Translates to: SSADNQLLGSGI*LHTARRYWKLF
Trigger: GAATAGCTTCCAGTACCTCCGGGCTGTGTGTAGCCAGATGCCAGATCCCAGCAACTGGTTGTCGGCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TTCCCTAAGCCATCAGAAGTCCTACCCTGCTCCTCTTaGGCTGAAGGGTCCGGGGCCAGTGCTTCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: FPKPSEVLPCSS*AEGSGASASVS
Trigger: AGAAACTGAAGCACTGGCCCCGGACCCTTCAGCCCAAGAGGAGCAGGGTAGGACTTCTGATGGCTTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TCTTGGCTGAGGAGGTCAGTATTTGGCTCTGGAGTTTaGCTGGCCACACTTGGTGGGTTGCAAAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SWLRRSVFGSGV*LATLGGLQRLP
Trigger: GGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp CCACTGGCCCTTGTCCCTGGGTCTAAGGCGCAGGCTTaGGCAATGGACGTGACGAGGTATTCATCATCAGCA +
Preference number: 6 (lower is better)
Translates to: PLALVPGSKAQA*AMDVTRYSSSA
Trigger: TGCTGATGATGAATACCTCGTCACGTCCATTGCCAAAGCCTGCGCCTTAGACCCAGGGACAAGGGCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp CATAAGCAAGCAGGCGCCGAGGAGTGGTCTCTCCGCTaGGGAATGAAGTCATCATCCCTTGGAAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: HKQAGAEEWSLR*GMKSSSLGSCP
Trigger: GGGACAGCTTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAGACCACTCCTCGGCGCCTGCTTGCTTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp CCCCGTTGCGCAGGTGTCTGTATACCACAACAGGGATaGGTTTCCAAGAGCGGAAAGAAGCCACGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PRCAGVCIPQQG*VSKSGKKPRSP
Trigger: TGGAGAACGTGGCTTCTTTCCGCTCTTGGAAACGCATCCCTGTTGTGGTATACAGACACCTGCGCAACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp CCCCAAGGCAGGGCCCTGCAGCTCGAATATGCTTATTaGTCGGCCTCTTGCTACAACAGCCATAAGCAAGCA +
Preference number: 6 (lower is better)
Translates to: PQGRALQLEYAY*SASCYNSHKQA
Trigger: TGCTTGCTTATGGCTGTTGTAGCAAGAGGCCGAGCAATAAGCATATTCGAGCTGCAGGGCCCTGCCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp AGGAGGAGGAAGGCCCATTTCTCCCACAGTCAGCTGTaGGCTTCCAACTCCAGAGTCTATGACTGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: RRRKAHFSHSQL*ASNSRVYDCLC
Trigger: GCAGAGACAGTCATAGACTCTGGAGTTGGAAGCCCACAGCTGACTGTGGGAGAAATGGGCCTTCCTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp GTCAGTATTTGGCTCTGGAGTTTGGCTGGCCACACTTaGTGGGTTGCAAAGGCTGCCCTGACTGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: VSIWLWSLAGHT*WVAKAALTVIW
Trigger: CCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp AGGGGGATCTTGGCTGAGGAGGTCAGTATTTGGCTCTaGAGTTTGGCTGGCCACACTTGGTGGGTTGCAAAG +
Preference number: 6 (lower is better)
Translates to: RGILAEEVSIWL*SLAGHTWWVAK
Trigger: CTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp GGTCAGTATTTGGCTCTGGAGTTTGGCTGGCCACACTaGGTGGGTTGCAAAGGCTGCCCTGACTGTGATCTG +
Preference number: 6 (lower is better)
Translates to: GQYLALEFGWPH*VGCKGCPDCDL
Trigger: CAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp ATCTTGGCTGAGGAGGTCAGTATTTGGCTCTGGAGTTaGGCTGGCCACACTTGGTGGGTTGCAAAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ILAEEVSIWLWS*AGHTWWVAKAA
Trigger: GGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 90 bp TACAACAGCCATAAGCAAGCAGGCGCCGAGGAGTGGTCTCTCCGCTaGGGAATGAAGTCATCATCCCTTGGAAGCTGTCCCAGTTTGACC +
Preference number: 6 (lower is better)
Translates to: YNSHKQAGAEEWSLR*GMKSSSLGSCPSLT
Trigger: GGTCAAACTGGGACAGCTTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAGACCACTCCTCGGCGCCTGCTTGCTTATGGCTGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 90 bp CACTGGGGAAGGGCAGCTCAGAAGAGAAGGCTTTGTGCTGGAGACTaGCTTCGGATGACTGGAAAACCACATCCGGTTGTTCTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: HWGRAAQKRRLCAGD*LRMTGKPHPVVLPS
Trigger: GGAGGGAAGAACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTCTGAGCTGCCCTTCCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp AGCTGTTCCACCTCTTGCCTGTACCCTGCTTCGATCTaGCGTAACCTGTGTTGGATCACATCCGTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: SCSTSCLYPASI*RNLCWITSVGK
Trigger: CTTTCCCACGGATGTGATCCAACACAGGTTACGGCAGATCGAAGCAGGGTACAGGCAAGAGGTGGAACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp ACAGCCCGGAGGTACTGGAAGCTATTCCGGATGGCGTaGATGTTGGCCATTCCCATAAACAAGACCTCACAG +
Preference number: 6 (lower is better)
Translates to: TARRYWKLFRMA*MLAIPINKTSQ
Trigger: CTGTGAGGTCTTGTTTATGGGAATGGCCAACATCCACGCCATCCGGAATAGCTTCCAGTACCTCCGGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp AGTATTTGGCTCTGGAGTTTGGCTGGCCACACTTGGTaGGTTGCAAAGGCTGCCCTGACTGTGATCTGGAGT +
Preference number: 6 (lower is better)
Translates to: SIWLWSLAGHTW*VAKAALTVIWS
Trigger: ACTCCAGATCACAGTCAGGGCAGCCTTTGCAACCCACCAAGTGTGGCCAGCCAAACTCCAGAGCCAAATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TGGTGGGAGATACTTGCCGTAGAACCAGGGGGATCTTaGCTGAGGAGGTCAGTATTTGGCTCTGGAGTTTGG +
Preference number: 6 (lower is better)
Translates to: WWEILAVEPGGS*LRRSVFGSGVW
Trigger: CCAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTCTACGGCAAGTATCTCCCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TGCTACAACAGCCATAAGCAAGCAGGCGCCGAGGAGTaGTCTCTCCGCTTGGGAATGAAGTCATCATCCCTT +
Preference number: 6 (lower is better)
Translates to: CYNSHKQAGAEE*SLRLGMKSSSL
Trigger: AAGGGATGATGACTTCATTCCCAAGCGGAGAGACCACTCCTCGGCGCCTGCTTGCTTATGGCTGTTGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp GAGAAGGCTTTGTGCTGGAGACTTGCTTCGGATGACTaGAAAACCACATCCGGTTGTTCTTCCCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: EKALCWRLASDD*KTTSGCSSLLG
Trigger: GCCCAGGAGGGAAGAACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp CTGGGGAAGGGCAGCTCAGAAGAGAAGGCTTTGTGCTaGAGACTTGCTTCGGATGACTGGAAAACCACATCC +
Preference number: 6 (lower is better)
Translates to: LGKGSSEEKALC*RLASDDWKTTS
Trigger: GGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTCTGAGCTGCCCTTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TGCCTGTACCCTGCTTCGATCTGCCGTAACCTGTGTTaGATCACATCCGTGGGAAAGGGGAGTCCATCATCA +
Preference number: 6 (lower is better)
Translates to: CLYPASICRNLC*ITSVGKGSPSS
Trigger: TGATGATGGACTCCCCTTTCCCACGGATGTGATCCAACACAGGTTACGGCAGATCGAAGCAGGGTACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp CTGGTGGGAGATACTTGCCGTAGAACCAGGGGGATCTaGGCTGAGGAGGTCAGTATTTGGCTCTGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: LVGDTCRRTRGI*AEEVSIWLWSL
Trigger: CAAACTCCAGAGCCAAATACTGACCTCCTCAGCCAAGATCCCCCTGGTTCTACGGCAAGTATCTCCCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp CTTCGATCTGCCGTAACCTGTGTTGGATCACATCCGTaGGAAAGGGGAGTCCATCATCATCCAGGTAGAGAG +
Preference number: 6 (lower is better)
Translates to: LRSAVTCVGSHP*ERGVHHHPGRE
Trigger: CTCTCTACCTGGATGATGATGGACTCCCCTTTCCCACGGATGTGATCCAACACAGGTTACGGCAGATCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TATAGATGTTGCGCTTCTCTCGCTCGCAGGGGTTGTTaGCCAGGAATGTGCCGTAGAGACACGAGTATGTGT +
Preference number: 6 (lower is better)
Translates to: YRCCASLARRGC*PGMCRRDTSMC
Trigger: ACACATACTCGTGTCTCTACGGCACATTCCTGGCCAACAACCCCTGCGAGCGAGAGAAGCGCAACATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp CGGAGGTACTGGAAGCTATTCCGGATGGCGTGGATGTaGGCCATTCCCATAAACAAGACCTCACAGTTCGGA +
Preference number: 6 (lower is better)
Translates to: RRYWKLFRMAWM*AIPINKTSQFG
Trigger: TCCGAACTGTGAGGTCTTGTTTATGGGAATGGCCAACATCCACGCCATCCGGAATAGCTTCCAGTACCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp GCTGCTTTTAGCATCACTGACAAGTGCTGCAGCCATTaGGTACTCTCCAGTGCCGACAACCAGTTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: AAFSITDKCCSH*VLSSADNQLLG
Trigger: TCCCAGCAACTGGTTGTCGGCACTGGAGAGTACCAAATGGCTGCAGCACTTGTCAGTGATGCTAAAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp AACCAGGTGTATAGAGGAAGTTATGAAAGTTCTTGTTaGCAGCTCGCAGGAGTGCCCACACAGAGCACGTCC +
Preference number: 6 (lower is better)
Translates to: NQVYRGSYESSC*QLAGVPTQSTS
Trigger: GGACGTGCTCTGTGTGGGCACTCCTGCGAGCTGGCAACAAGAACTTTCATAACTTCCTCTATACACCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp CTGCTTTTAGCATCACTGACAAGTGCTGCAGCCATTTaGTACTCTCCAGTGCCGACAACCAGTTGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: LLLASLTSAAAI*YSPVPTTSCWD
Trigger: ATCCCAGCAACTGGTTGTCGGCACTGGAGAGTACCAAATGGCTGCAGCACTTGTCAGTGATGCTAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp CCTCCAGAGTCCTGTAATATGGATCCAGTAGTATTTTaGCCAGGGCTACAATCTGTGGTGTACGGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: PPESCNMDPVVF*PGLQSVVYGPS
Trigger: GCTGGGACCGTACACCACAGATTGTAGCCCTGGCCAAAATACTACTGGATCCATATTACAGGACTCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp TTGGCCAACCAGAATTCACAGTCACAGTTAAAGCAGTaGGATGCCATATGGTCTGGAACCCAGCGAGTCACC +
Preference number: 6 (lower is better)
Translates to: LANQNSQSQLKQ*DAIWSGTQRVT
Trigger: GGTGACTCGCTGGGTTCCAGACCATATGGCATCCCACTGCTTTAACTGTGACTGTGAATTCTGGTTGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp AGGGCAGCTCAGAAGAGAAGGCTTTGTGCTGGAGACTaGCTTCGGATGACTGGAAAACCACATCCGGTTGTT +
Preference number: 6 (lower is better)
Translates to: RAAQKRRLCAGD*LRMTGKPHPVV
Trigger: AACAACCGGATGTGGTTTTCCAGTCATCCGAAGCAAGTCTCCAGCACAAAGCCTTCTCTTCTGAGCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 72 bp AAGATCCATATTTTCCTCTCCAAGGGTGCATGGAGATaGCGCAGGCAGATAAACAGCTGTCCAGAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: KIHIFLSKGAWR*RRQINSCPEVQ
Trigger: CTGCACCTCTGGACAGCTGTTTATCTGCCTGCGTCATCTCCATGCACCCTTGGAGAGGAAAATATGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp GCATGCAGTCAGAGAAGAATCGAAATCTGTGTCACATaGCTCACTGGCATCATTAGTCCCAGTGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: ACSQRRIEICVT*LTGIISPSAEG
Trigger: TCCCTCAGCACTGGGACTAATGATGCCAGTGAGGCATGTGACACAGATTTCGATTCTTCTCTGACTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp CTGGAGGAACACAGGACACTGTTCATTTTGGTCCTCTaGATTTTCCTGATGGCCACAGCGGTCTCCAAACTT +
Preference number: 6 (lower is better)
Translates to: LEEHRTLFILVL*IFLMATAVSKL
Trigger: AAGTTTGGAGACCGCTGTGGCCATCAGGAAAATGCAGAGGACCAAAATGAACAGTGTCCTGTGTTCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp CAACCAGAATTCACAGTCACAGTTAAAGCAGTGGGATaGCATATGGTCTGGAACCCAGCGAGTCACCTCAGT +
Preference number: 6 (lower is better)
Translates to: QPEFTVTVKAVG*HMVWNPASHLS
Trigger: ACTGAGGTGACTCGCTGGGTTCCAGACCATATGGCATCCCACTGCTTTAACTGTGACTGTGAATTCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS GCA 72 bp GAAGTTATGAAAGTTCTTGTTGCCAGCTCGCAGGAGTaGCCACACAGAGCACGTCCGTTTATAGATGTTGCG +
Preference number: 6 (lower is better)
Translates to: EVMKVLVASSQE*PHRARPFIDVA
Trigger: CGCAACATCTATAAACGGACGTGCTCTGTGTGGGCACTCCTGCGAGCTGGCAACAAGAACTTTCATAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp ATGACTGGAAAACCACATCCGGTTGTTCTTCCCTCCTaGGCCTGTGCAGTGTCCATTGGAATGACTAGAACA +
Preference number: 6 (lower is better)
Translates to: MTGKPHPVVLPS*ACAVSIGMTRT
Trigger: TGTTCTAGTCATTCCAATGGACACTGCACAGGCCCAGGAGGGAAGAACAACCGGATGTGGTTTTCCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp ACAGTCACAGTTAAAGCAGTGGGATGCCATATGGTCTaGAACCCAGCGAGTCACCTCAGTCTCCTTCTTATC +
Preference number: 6 (lower is better)
Translates to: TVTVKAVGCHMV*NPASHLSLLLI
Trigger: GATAAGAAGGAGACTGAGGTGACTCGCTGGGTTCCAGACCATATGGCATCCCACTGCTTTAACTGTGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp AATTCACAGTCACAGTTAAAGCAGTGGGATGCCATATaGTCTGGAACCCAGCGAGTCACCTCAGTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: NSQSQLKQWDAI*SGTQRVTSVSF
Trigger: GAAGGAGACTGAGGTGACTCGCTGGGTTCCAGACCATATGGCATCCCACTGCTTTAACTGTGACTGTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp GTGGTCTCTCCGCTTGGGAATGAAGTCATCATCCCTTaGAAGCTGTCCCAGTTTGACCCTAAAAATGAGAAC +
Preference number: 6 (lower is better)
Translates to: VVSPLGNEVIIP*KLSQFDPKNEN
Trigger: GTTCTCATTTTTAGGGTCAAACTGGGACAGCTTCCAAGGGATGATGACTTCATTCCCAAGCGGAGAGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 72 bp CTCACCACTTTGGAGTCCTTGCAGGCAATGTGCAACTaGAACATATCACGGCTTTCCACACTGTCAATCATC +
Preference number: 6 (lower is better)
Translates to: LTTLESLQAMCN*NISRLSTLSII
Trigger: GATGATTGACAGTGTGGAAAGCCGTGATATGTTTCAGTTGCACATTGCCTGCAAGGACTCCAAAGTGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
ENSMUST00000134216.3
ENSMUST00000146871.8
CDS TCA 72 bp AGCTGTCCCAGTTTGACCCTAAAAATGAGAACTCACTaGTCTGGCTCTGAGAAATTGGCTTTCGGGCCAACT +
Preference number: 6 (lower is better)
Translates to: SCPSLTLKMRTH*SGSEKLAFGPT
Trigger: AGTTGGCCCGAAAGCCAATTTCTCAGAGCCAGATCAGTGAGTTCTCATTTTTAGGGTCAAACTGGGACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CCA 72 bp CAGAGAACGACCAGAAAATTCCTGGCTCTGAGCCACTaGGGAAAGGTAAAGATCCATATTTTCCTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: QRTTRKFLALSH*GKVKIHIFLSK
Trigger: CTTGGAGAGGAAAATATGGATCTTTACCTTTCCCCAGTGGCTCAGAGCCAGGAATTTTCTGGTCGTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS CAA 72 bp TCAACTGGAAGCCGTAGCAATGGGTTTCTTCAGATGTaGGCTCATGAGTTCCCTGGCACGAGATACTTGAAT +
Preference number: 6 (lower is better)
Translates to: STGSRSNGFLQM*AHEFPGTRYLN
Trigger: ATTCAAGTATCTCGTGCCAGGGAACTCATGAGCCAACATCTGAAGAAACCCATTGCTACGGCTTCCAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8
CDS TCA 72 bp TTCCCTGGCACGAGATACTTGAATGTGTTCATAACATaGGTTACAGACGAGAACTGGGTCATAGAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: FPGTRYLNVFIT*VTDENWVIELL
Trigger: CAGCAACTCTATGACCCAGTTCTCGTCTGTAACTCATGTTATGAACACATTCAAGTATCTCGTGCCAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092802.12
ENSMUST00000103179.10
ENSMUST00000119628.8