RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTMR14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030269

Ensembl transcript IDs: ENSMUST00000113146.9, ENSMUST00000129883.8, ENSMUST00000134945.8, ENSMUST00000137772.8, ENSMUST00000142938.8, ENSMUST00000144976.4, ENSMUST00000148523.8, ENSMUST00000151149.2, ENSMUST00000156141.3, ENSMUST00000203385.2

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCCGGTCCTGAATACTGCCACAGCCCGATACCAGCTGCCAGCTaGCAAAGTCTGTGGAGAGAGAGGATCCGGGCAGGGGATGGTCCA +
Preference number: 1 (lower is better)
Translates to: QAGPEYCHSPIPAAS*QSLWRERIRAGDGP
Trigger: TGGACCATCCCCTGCCCGGATCCTCTCTCTCCACAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
3UTR GCA 90 bp GGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTaGCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCC +
Preference number: 1 (lower is better)
Translates to: GKWLWAVSFTRCWCL*PGAQHHGQTVLAGP
Trigger: GGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR CCA 90 bp CACGGGCAAACTGTTCTAGCAGGCCCCCGATGGCACCAGAGGGACTaGGGGTTGCTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCA +
Preference number: 1 (lower is better)
Translates to: HGQTVLAGPRWHQRD*GLLLEVPLCCCMQP
Trigger: TGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAACCCCCAGTCCCTCTGGTGCCATCGGGGGCCTGCTAGAACAGTTTGCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR TCA 90 bp CCTGAGTTGGTGCTCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTaGAGCTCCCCACAGCTCCCGGTGAGTGCTCCAAGACCAGGGAGA +
Preference number: 1 (lower is better)
Translates to: PELVLLPGQVPQSHS*SSPQLPVSAPRPGR
Trigger: TCTCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGAGCACCAACTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR GCA 90 bp AGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTaGTTGTGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCA +
Preference number: 1 (lower is better)
Translates to: RGGKWLWAVSFTRCW*LCPGAQHHGQTVLA
Trigger: TGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR CCA 90 bp GACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTaGTGCTTGTGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTA +
Preference number: 1 (lower is better)
Translates to: DRGGKWLWAVSFTRC*CLCPGAQHHGQTVL
Trigger: TAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR CCA 90 bp CAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTaGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGC +
Preference number: 1 (lower is better)
Translates to: QWKAVSGESGHQSGG*EVESPILRPAQVWG
Trigger: GCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR GCA 90 bp TCCCCACAGCTCCCGGTGAGTGCTCCAAGACCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGCCTCGATCTTTGTGTCTCAACATGC +
Preference number: 1 (lower is better)
Translates to: SPQLPVSAPRPGRSR*LGWLCCLDLCVSTC
Trigger: GCATGTTGAGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR GCA 90 bp AAGGGAGAGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTGAATACTaGCACAGCCCGATACCAGCTGCCAGCTGCCAAAGTCTGTGGAGA +
Preference number: 1 (lower is better)
Translates to: KGERSLCAGQAGPEY*HSPIPAASCQSLWR
Trigger: TCTCCACAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCTCTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
3UTR TCA 90 bp AAGCTGAAAGGGAGAGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTaGATACTGCCACAGCCCGATACCAGCTGCCAGCTGCCAAAGTCT +
Preference number: 1 (lower is better)
Translates to: KLKGREESVCRTGRS*ILPQPDTSCQLPKS
Trigger: AGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
3UTR GCA 90 bp CCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTaGAGCCTTGTCTCCCGGTCACTCAGAGCTGTAAGTAGACAACTG +
Preference number: 1 (lower is better)
Translates to: PTVLLYAAKKADRTS*SLVSRSLRAVSRQL
Trigger: CAGTTGTCTACTTACAGCTCTGAGTGACCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR CCA 90 bp GGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTaGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCC +
Preference number: 1 (lower is better)
Translates to: GGWEVESPILRPAQV*GCHVCNREGGWEIS
Trigger: GGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR GCA 90 bp TCGATCTTTGTGTCTCAACATGCAGATATCTTCCACAGTGAAGCCTaGATCCCGAGTTGGCAAACTCTTCCTCCTCTGGGTCTTCAGGCA +
Preference number: 1 (lower is better)
Translates to: SIFVSQHADIFHSEA*IPSWQTLPPLGLQA
Trigger: TGCCTGAAGACCCAGAGGAGGAAGAGTTTGCCAACTCGGGATGCAGGCTTCACTGTGGAAGATATCTGCATGTTGAGACACAAAGATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR GCA 90 bp TGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGGCACCTCCAGGGCCCCTTTTaGCAGGCCTGGCCTGATTCC +
Preference number: 2 (lower is better)
Translates to: CPGAQHHGQTVLAGPRWHLQGPF*QAWPDS
Trigger: GGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAG...GTGCCATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR GCA 90 bp CTCTCCAGGGCCCCTTTTGCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGCTCCAGGGCCCCTTTTaGCAGGCCTGGCCTGATTCC +
Preference number: 2 (lower is better)
Translates to: LSRAPFARPGLIPQGSAELQGPF*QAWPDS
Trigger: GGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAG...CTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp CTCTCCAGGGCCCCTTTTGCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGCCCTTTTGCCAGGCCTaGCCTGATTCCACAGGGCTC +
Preference number: 2 (lower is better)
Translates to: LSRAPFARPGLIPQGSAEPFCQA*PDSTGL
Trigger: GAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGG...CTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR CAA 90 bp GGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTaGTGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGC +
Preference number: 2 (lower is better)
Translates to: GGKWLWAVSFTRCWC*CPGAQHHGQTVLAG
Trigger: GCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp GCTGAGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTTCCACAGGGCTCAGCTaGGACAGGGGCGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: AETGAGNGCGLSASQGAGSTGLS*DRGGKW
Trigger: CCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGA...ACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp GTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGCAGCCTTGTCTCCTTCCTCCAAGCTGCCTaGGTTGGTGCTCCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: VLLYAAKKADRTSCSLVSFLQAA*VGAPAG
Trigger: CCCGGCAGGAGCACCAACTCAGGCAGCTTGGAGGAA...GGAGACAAGGCTGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR CCA 90 bp GGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTGCCCCCCTTTTGCCAGGCCTaGCCTGATTCCACAGGGCTC +
Preference number: 2 (lower is better)
Translates to: GREMAVGCQLHKVLVLVPPFCQA*PDSTGL
Trigger: GAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGG...GGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp GGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTGCCCGATCCGGGCAGGGGATaGTCCACTGATCAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: GREMAVGCQLHKVLVLVPDPGRG*STDQAA
Trigger: GGCAGCTTGATCAGTGGACCATCCCCTGCCCGGATC...GGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
3UTR-3UTR TCA 90 bp GTTGCTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCTCCACAGGGCTCAGCTaGGACAGGGGCGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: VAARSPTVLLYAAKKADRSTGLS*DRGGKW
Trigger: CCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGA...GCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp GGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTGCCCCAGGGGATGGTCCACTaGTCAAGCTGCCTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: GREMAVGCQLHKVLVLVPQGMVH*SSCLSW
Trigger: CCAACTCAGGCAGCTTGATCAGTGGACCATCCCCTG...GGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
3UTR-3UTR GCA 90 bp TCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTGAAGCTCCCCACAGCTCCCGGACAGCTCCCGGTGAGTaGTCCAAGACCAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SCRGKFHSLIAEAPHSSRTAPGE*SKTREK
Trigger: CTTCTCCCTGGTCTTGGAGCACTCACCGGGAGCTGT...CCGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR CCA 90 bp GGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGCCCTTTTGCCAGGCCTaGCCTGATTCCACAGGGCTC +
Preference number: 2 (lower is better)
Translates to: GQWKAVSGESGHQSGGWEPFCQA*PDSTGL
Trigger: GAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGG...CTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp CTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCAAGCTGCCTGAGTTaGTGCTCCTGCCGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: LLEVPLCCCMQPRRQTAPPSCLS*CSCRGK
Trigger: CTTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGG...AGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR CCA 90 bp GCTGAGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTTCAAGCTGCCTGAGTTaGTGCTCCTGCCGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: AETGAGNGCGLSASQGAGSSCLS*CSCRGK
Trigger: CTTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGA...ACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
3UTR CAA 90 bp CAATGGAGGAAGGCCAGCCACATCCTCCAGCAGGCTCCTTACCCCTaGAGGTTCCTCACCTGGGTTTGGGGACCTCAAGAGGACTGCTGC +
Preference number: 2 (lower is better)
Translates to: QWRKASHILQQAPYP*RFLTWVWGPQEDCC
Trigger: GCAGCAGTCCTCTTGAGGTCCCCAAACCCAGGTGAGGAACCTCAAGGGGTAAGGAGCCTGCTGGAGGATGTGGCTGGCCTTCCTCCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR TCA 90 bp AAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGTCCACAGGGCTCAGCTaGGACAGGGGCGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: KVPSSGLLRFGAAMCATESTGLS*DRGGKW
Trigger: CCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGA...CTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp CTTGTGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGTCTCCTCCCCTTTGCTaGGCCGATCTACCAACATGT +
Preference number: 2 (lower is better)
Translates to: LVPRSPTPRANCSSRPPMSPPLC*ADLPTC
Trigger: ACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGA...CATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR TCA 90 bp CCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGCAGCCCCACAGCTCCCGGTaGGTGCTCCAAGACCAGGGA +
Preference number: 2 (lower is better)
Translates to: PNSNPSFSTRPGSEDSEQPHSSR*VLQDQG
Trigger: TCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGG...CTGCTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR GCA 90 bp AAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAGCAGACCGCACCTCCTaGAGCCTTGTCTCCCGGTCA +
Preference number: 2 (lower is better)
Translates to: KSHPQACSGLGLPCVQQRADRTS*SLVSRS
Trigger: TGACCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGC...TCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp CATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCCCTGCTCTCCAGGGCCCCCCCTTTTGCCAGGCCTaGCCTGATTCCACAGGGCTC +
Preference number: 2 (lower is better)
Translates to: HVCNREGGWEISPALQGPPFCQA*PDSTGL
Trigger: GAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGG...GGGGCCCTGGAGAGCAGGGGAAATTTCCCATCCCCCTTCTCTGTTGCACACATG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR GCA 90 bp GAAGCTGAAAGGGAGAGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTGAATACTCTCCAGGGCCCCTTTTaGCAGGCCTGGCCTGATTCC +
Preference number: 2 (lower is better)
Translates to: EAERERGVCVQDRPVLNTLQGPF*QAWPDS
Trigger: GGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAG...AGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
3UTR-3UTR GCA 90 bp CGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTGCCCCGGGCTCAGGTTTGGGGCTaGCATGTGTGCAACAGAGAA +
Preference number: 2 (lower is better)
Translates to: REMAVGCQLHKVLVLVPRAQVWG*HVCNRE
Trigger: TTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC...CCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp GTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAGAACACCAGGGTCAGTaGAAGGCAGTGAGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: VEGSEWREWSPVRRLGGREHQGQ*KAVSGE
Trigger: CTCGCCACTCACTGCCTTCCACTGACCCTGGTGTTC...TCTACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp CTCTCCAGGGCCCCTTTTGCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGCATTTTCAGTGCAGGTaGTTCTCCTTCCCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: LSRAPFARPGLIPQGSAEHFQCR*FSFPGN
Trigger: GTTTCCTGGGAAGGAGAATCACCTGCACTGAAAATG...CTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
3UTR-3UTR TCA 90 bp TCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTGAAGCTCCCCACAGCTCCCGGAGATATCTTCCACAGTaGAGCCTGCATCCCGAGTTG +
Preference number: 2 (lower is better)
Translates to: SCRGKFHSLIAEAPHSSRRYLPQ*SLHPEL
Trigger: CAACTCGGGATGCAGGCTTCACTGTGGAAGATATCT...CCGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR GCA 90 bp TGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCTCCAGGGCCCCTTTTaGCAGGCCTGGCCTGATTCC +
Preference number: 2 (lower is better)
Translates to: CSGLGLPCVQQRRGMGNFLQGPF*QAWPDS
Trigger: GGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAG...GAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR GCA 90 bp CCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGTGGGGCTGCCATGTGTaGAACAGAGAAGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: PPNSNPSFSTRPGSEDSEWGCHV*NREGGW
Trigger: CCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCA...CTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
3UTR-3UTR GCA 90 bp CATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGGCTCAGGTTTGGGGCTaGCATGTGTGCAACAGAGAA +
Preference number: 2 (lower is better)
Translates to: HPQACSGLGLPCVQQRRGAQVWG*HVCNRE
Trigger: TTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC...CCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR GCA 90 bp TGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCAGGTGCTGGTGCTTGTaGCCCGGAGCCCAACACCAC +
Preference number: 2 (lower is better)
Translates to: CSGLGLPCVQQRRGMGNFRCWCL*PGAQHH
Trigger: GTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCT...GAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp GGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGACACCAGTCAGGAGGTTaGGAGGTAGAAAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: GSVEGSEWREWSPVRRLGHQSGG*EVESPI
Trigger: GATGGGACTTTCTACCTCCCAACCTCCTGACTGGTG...TCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp CATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAACACAATTCTCCACAGGGCTCAGCTaGGACAGGGGCGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: HYNLHEALGTPLYPPTQFSTGLS*DRGGKW
Trigger: CCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGA...GAATTGTGTTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
3UTR-3UTR TCA 90 bp TGCCTGAGTTGGTGCTCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTGAAGCTACTCTGTGGGGAGGATaGGTGACTCTTCCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: CLSWCSCRGKFHSLIAEATLWGG*VTLPPS
Trigger: GCTTGGAGGAAGAGTCACTCATCCTCCCCACAGAGT...AGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGAGCACCAACTCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR TCA 90 bp CAACCTCGACAATGGAGGAAGGCCAGCCACATCCTCCAGCAGGCTCCTTACCCCAAGACTTGGCTTCAGTaGGCCCATGGTGTGAAGGTA +
Preference number: 2 (lower is better)
Translates to: QPRQWRKASHILQQAPYPKTWLQ*AHGVKV
Trigger: TACCTTCACACCATGGGCTCACTGAAGCCAAGTCTT...GGGGTAAGGAGCCTGCTGGAGGATGTGGCTGGCCTTCCTCCATTGTCGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR GCA 90 bp TCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGCTCAGGTTTGGGGCTaGCATGTGTGCAACAGAGAA +
Preference number: 2 (lower is better)
Translates to: SHPQACSGLGLPCVQQRRAQVWG*HVCNRE
Trigger: TTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC...CCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR GCA 90 bp GGGTCCGGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTTCCACAGTGAAGCCTaGATCCCGAGTTGGCAAACT +
Preference number: 2 (lower is better)
Translates to: GSGPSLRYSVPAARCHHLFHSEA*IPSWQT
Trigger: AGTTTGCCAACTCGGGATGCAGGCTTCACTGTGGAA...GAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACCGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR GCA 90 bp CAACCTCGACAATGGAGGAAGGCCAGCCACATCCTCCAGCAGGCTCCTTACCCCGAGGAGAGTGAAGTTTaGATAGCGCTGGGCTTTGTC +
Preference number: 2 (lower is better)
Translates to: QPRQWRKASHILQQAPYPEESEV*IALGFV
Trigger: GACAAAGCCCAGCGCTATGCAAACTTCACTCTCCTC...GGGGTAAGGAGCCTGCTGGAGGATGTGGCTGGCCTTCCTCCATTGTCGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR CCA 90 bp TCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGCACCAGTCAGGAGGTTaGGAGGTAGAAAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: SHPQACSGLGLPCVQQRRHQSGG*EVESPI
Trigger: GATGGGACTTTCTACCTCCCAACCTCCTGACTGGTG...CCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp CTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCACCAGTCAGGAGGTTaGGAGGTAGAAAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: LLEVPLCCCMQPRRQTAPHQSGG*EVESPI
Trigger: GATGGGACTTTCTACCTCCCAACCTCCTGACTGGTG...AGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp CTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCCGAACACCAGGGTCAGTaGAAGGCAGTGAGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: LRFGAAMCATEKGDGKFPEHQGQ*KAVSGE
Trigger: CTCGCCACTCACTGCCTTCCACTGACCCTGGTGTTC...GGGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR CCA 90 bp TCCGGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTGCCTGCATCCCGAGTTaGCAAACTCTTCCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SGPSLRYSVPAARCHHLCACIPS*QTLPPL
Trigger: CAGAGGAGGAAGAGTTTGCCAACTCGGGATGCAGGC...ACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR CAA 90 bp AGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTaGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTC +
Preference number: 2 (lower is better)
Translates to: RRLGGRKSHPQACSG*GLPCVQQRRGMGNF
Trigger: GAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp GGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGAGTTGACAGTAATCTaGACACCAGGGTCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: GSVEGSEWREWSPVRRLGELTVI*TPGSVE
Trigger: TTCCACTGACCCTGGTGTTCAGATTACTGTCAACTC...TCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp AGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGAGTTGACAGTAATCTaGACACCAGGGTCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: RQGREMAVGCQLHKVLVLELTVI*TPGSVE
Trigger: TTCCACTGACCCTGGTGTTCAGATTACTGTCAACTC...AAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR-3UTR TCA 90 bp GGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATCTCCTCCCCTTTGCTaGGCCGATCTACCAACATGT +
Preference number: 2 (lower is better)
Translates to: GPSLRYSVPAARCHHLCSSPPLC*ADLPTC
Trigger: ACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGA...TGAACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000142938.8
ENSMUST00000144976.4
3UTR-3UTR TCA 90 bp GGGTCCGGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTCAATGTTCAGAGATTaGGTCAGGAAGTTGGGGATG +
Preference number: 2 (lower is better)
Translates to: GSGPSLRYSVPAARCHHLSMFRD*VRKLGM
Trigger: CATCCCCAACTTCCTGACTCAATCTCTGAACATTGA...GAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACCGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000142938.8
ENSMUST00000144976.4
ENSMUST00000203385.2
3UTR-3UTR TCA 90 bp GGGGTCCGGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTTCAATGTTCAGAGATTaGGTCAGGAAGTTGGGGATG +
Preference number: 2 (lower is better)
Translates to: GVRSQPEIQCTSSPLSSSSMFRD*VRKLGM
Trigger: CATCCCCAACTTCCTGACTCAATCTCTGAACATTGA...AGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACCGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000142938.8
ENSMUST00000144976.4
ENSMUST00000203385.2
3UTR-3UTR CCA 90 bp ACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCCACCAGTCAGGAGGTTaGGAGGTAGAAAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: TPPNSNPSFSTRPGSEDSHQSGG*EVESPI
Trigger: GATGGGACTTTCTACCTCCCAACCTCCTGACTGGTG...GGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
3UTR-3UTR CCA 90 bp TTTGCTGACATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAAGAACACCAGGGTCAGTaGAAGGCAGTGAGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: FADIIISMRPWERPCTLQEHQGQ*KAVSGE
Trigger: CTCGCCACTCACTGCCTTCCACTGACCCTGGTGTTC...TTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATGTCAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
3UTR-3UTR CCA 90 bp CTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCCGATGGTCCACTGATCTaGGTTTGGGGACCTCAAGAG +
Preference number: 2 (lower is better)
Translates to: LRFGAAMCATEKGDGKFPDGPLI*VWGPQE
Trigger: CTCTTGAGGTCCCCAAACCCAGATCAGTGGACCATC...GGGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR TCA 90 bp AGGGAGAAGTCGCTGCCTAGGCTGGTTGTGCTGCCTCGATCTTTGTGTCTCAACAGATATCTTCCACAGTaGAGCCTGCATCCCGAGTTG +
Preference number: 2 (lower is better)
Translates to: REKSLPRLVVLPRSLCLNRYLPQ*SLHPEL
Trigger: CAACTCGGGATGCAGGCTTCACTGTGGAAGATATCT...GTTGAGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR GCA 90 bp GGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCAGAGGAGAGTGAAGTTTaGATAGCGCTGGGCTTTGTC +
Preference number: 2 (lower is better)
Translates to: GPSLRYSVPAARCHHLCSEESEV*IALGFV
Trigger: GACAAAGCCCAGCGCTATGCAAACTTCACTCTCCTC...TGAACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000142938.8
ENSMUST00000203385.2
3UTR-3UTR GCA 90 bp TTTGCTGACATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAAGCTCAGGTTTGGGGCTaGCATGTGTGCAACAGAGAA +
Preference number: 2 (lower is better)
Translates to: FADIIISMRPWERPCTLQAQVWG*HVCNRE
Trigger: TTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC...TTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATGTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
3UTR-3UTR GCA 90 bp ACACAAGCCCGGGTTTCTTTCCCCAGCAAAGAAGGAACAGAGATAAATCCTACTCCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGC +
Preference number: 2 (lower is better)
Translates to: TQARVSFPSKEGTEINPTPGRSR*LGWLCC
Trigger: GCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGG...AGTAGGATTTATCTCTGTTCCTTCTTTGCTGGGGAAAGAAACCCGGGCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR CCA 90 bp AATGTGATATACTCCACTTCCAACCTCGACAATGGAGGAAGGCCAGCCACATCCTTCCTCACCTGGGTTTaGGGACCTCAAGAGGACTGC +
Preference number: 2 (lower is better)
Translates to: NVIYSTSNLDNGGRPATSFLTWV*GPQEDC
Trigger: GCAGTCCTCTTGAGGTCCCCAAACCCAGGTGAGGAA...GGATGTGGCTGGCCTTCCTCCATTGTCGAGGTTGGAAGTGGAGTATATCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR TCA 90 bp GTGGTAGAGCATTTATTTGCTTATAAACACAAGCCCGGGTTTCTTTCCCCAGCAGTCAGTGGAAGGCAGTaGGTGGCGAGAGTGGTCACC +
Preference number: 2 (lower is better)
Translates to: VVEHLFAYKHKPGFLSPAVSGRQ*VARVVT
Trigger: GGTGACCACTCTCGCCACTCACTGCCTTCCACTGAC...TGCTGGGGAAAGAAACCCGGGCTTGTGTTTATAAGCAAATAAATGCTCTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
3UTR-3UTR TCA 90 bp GTGGTAGAGCATTTATTTGCTTATAAACACAAGCCCGGGTTTCTTTCCCCAGCACCACAGTCTCATAGCTaGAGCTCCCCACAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: VVEHLFAYKHKPGFLSPAPQSHS*SSPQLP
Trigger: CGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGG...TGCTGGGGAAAGAAACCCGGGCTTGTGTTTATAAGCAAATAAATGCTCTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR TCA 90 bp GTGGTAGAGCATTTATTTGCTTATAAACACAAGCCCGGGTTTCTTTCCCCAGCACAGGGGATGGTCCACTaGTCTGGGTTTGGGGACCTC +
Preference number: 2 (lower is better)
Translates to: VVEHLFAYKHKPGFLSPAQGMVH*SGFGDL
Trigger: GAGGTCCCCAAACCCAGATCAGTGGACCATCCCCTG...TGCTGGGGAAAGAAACCCGGGCTTGTGTTTATAAGCAAATAAATGCTCTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR CCA 90 bp TTTGCTGACATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAAAACAGAGAAGGGGGATaGGAAATTTCCCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: FADIIISMRPWERPCTLQNREGG*EISPAL
Trigger: GAGAGCAGGGGAAATTTCCCATCCCCCTTCTCTGTT...TTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATGTCAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
3UTR-3UTR TCA 90 bp TTTGCTGACATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAAGAGTTGACAGTAATCTaGACACCAGGGTCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: FADIIISMRPWERPCTLQELTVI*TPGSVE
Trigger: TTCCACTGACCCTGGTGTTCAGATTACTGTCAACTC...TTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATGTCAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
3UTR-3UTR TCA 90 bp GAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCTCTCCTCCCCTTTGCTaGGCCGATCTACCAACATGT +
Preference number: 2 (lower is better)
Translates to: EIQCTSSPLSSSLFMMKSSPPLC*ADLPTC
Trigger: ACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGA...GCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000142938.8
ENSMUST00000144976.4
3UTR-3UTR CCA 90 bp TCCGGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTTCACAACCTGGATATaGAATAGAGAGGAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: SGPSLRYSVPAARCHHLCFTTWI*NREESE
Trigger: TTCACTCTCCTCTCTATTCCATATCCAGGTTGTGAA...ACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000142938.8
ENSMUST00000203385.2
3UTR CAA 90 bp CTGGGTTTGGGGACCTCAAGAGGACTGCTGCCCATCCTGAAAAAGTaGTCAGAATGGTTTGAGGATGAAGAGCTAGAAGACTTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: LGLGTSRGLLPILKK*SEWFEDEELEDLAS
Trigger: TGAAGCCAAGTCTTCTAGCTCTTCATCCTCAAACCATTCTGACAACTTTTTCAGGATGGGCAGCAGTCCTCTTGAGGTCCCCAAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR TCA 90 bp AGAAGTCGCTGCCTAGGCTGGTTGTGCTGCCTCGATCTTTGTGTCTCAACATGCACAGATGTACTTGACTaGCAGGTATTGAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: RSRCLGWLCCLDLCVSTCTDVLD*QVLKQL
Trigger: AAGCTGCTTCAATACCTGTCAGTCAAGTACATCTGT...GCATGTTGAGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR CCA 90 bp GATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGAAACTCTTCCTCCTCTaGGTCTTCAGGCAGAACTCT +
Preference number: 2 (lower is better)
Translates to: DTVYQQPAVIISVHDEKQKLFLL*VFRQNS
Trigger: AGAGTTCTGCCTGAAGACCCAGAGGAGGAAGAGTTT...CTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR CCA 90 bp GTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGCAGTTTTTCACAACCTGGATATaGAATAGAGAGGAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: VYQQPAVIISVHDEKQQFFTTWI*NREESE
Trigger: TTCACTCTCCTCTCTATTCCATATCCAGGTTGTGAA...AAACTGCTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000142938.8
ENSMUST00000203385.2
3UTR-3UTR CCA 90 bp GTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGCAGTTTGAAGAATTCACAACCTaGATATGGAATAGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: VYQQPAVIISVHDEKQQFEEFTT*IWNREE
Trigger: CTCCTCTCTATTCCATATCCAGGTTGTGAATTCTTC...AAACTGCTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000142938.8
ENSMUST00000203385.2
3UTR-3UTR TCA 90 bp ACACAAGCCCGGGTTTCTTTCCCCAGCAAAGAAGGAACAGAGATAAATCCTACTAGAATGGGGTTTTGCTaGCATTATAATCTCCATGAG +
Preference number: 2 (lower is better)
Translates to: TQARVSFPSKEGTEINPTRMGFC*HYNLHE
Trigger: CTCATGGAGATTATAATGTCAGCAAAACCCCATTCT...AGTAGGATTTATCTCTGTTCCTTCTTTGCTGGGGAAAGAAACCCGGGCTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
3UTR GCA 72 bp GGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTaGTGGTGCTTGTGCCCCGGAGCCCAACACCACGGG +
Preference number: 3 (lower is better)
Translates to: GGKWLWAVSFTR*WCLCPGAQHHG
Trigger: CCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR CAA 90 bp TGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGGCACCAGGCCTGCTCAGGTTaGGGGCTGCCATGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: CPGAQHHGQTVLAGPRWHQACSG*GLPCVQ
Trigger: TTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTG...GTGCCATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR TCA 72 bp GGGAGAGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTaGATACTGCCACAGCCCGATACCAGCTGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: GREESVCRTGRS*ILPQPDTSCQL
Trigger: CAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
3UTR TCA 72 bp GATCCGGGCAGGGGATGGTCCACTGATCAAGCTGCCTaGGTTGGTGCTCCTGCCGGGGCAAGTTCCACAGTC +
Preference number: 3 (lower is better)
Translates to: DPGRGWSTDQAA*VGAPAGASSTV
Trigger: GACTGTGGAACTTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGATCAGTGGACCATCCCCTGCCCGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
3UTR CCA 72 bp GGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTaGTGCTTGTGCCCCGGAGCCCAACACCACGGGCAA +
Preference number: 3 (lower is better)
Translates to: GKWLWAVSFTRC*CLCPGAQHHGQ
Trigger: TTGCCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR CAA 90 bp CATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGCAGGCCTGCTCAGGTTaGGGGCTGCCATGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: HPQACSGLGLPCVQQRRGQACSG*GLPCVQ
Trigger: TTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTG...CCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR CAA 90 bp GGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGACAGGCCTGCTCAGGTTaGGGGCTGCCATGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: GSVEGSEWREWSPVRRLGQACSG*GLPCVQ
Trigger: TTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTG...TCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR CAA 90 bp GCTGAGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTCAGGCCTGCTCAGGTTaGGGGCTGCCATGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: AETGAGNGCGLSASQGAGQACSG*GLPCVQ
Trigger: TTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTG...ACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR GCA 72 bp CCTGAATACTGCCACAGCCCGATACCAGCTGCCAGCTaGCAAAGTCTGTGGAGAGAGAGGATCCGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: PEYCHSPIPAAS*QSLWRERIRAG
Trigger: CCCTGCCCGGATCCTCTCTCTCCACAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
3UTR GCA 72 bp AGGGACTGGGGGTTGCTGCTCGAAGTCCCACTGTGCTaGTGTATGCAGCCAAGAAGGCAGACCGCACCTCCT +
Preference number: 3 (lower is better)
Translates to: RDWGLLLEVPLC*CMQPRRQTAPP
Trigger: AGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAACCCCCAGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR GCA 72 bp CAGAGGGACTGGGGGTTGCTGCTCGAAGTCCCACTGTaGTGCTGTATGCAGCCAAGAAGGCAGACCGCACCT +
Preference number: 3 (lower is better)
Translates to: QRDWGLLLEVPL*CCMQPRRQTAP
Trigger: AGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAACCCCCAGTCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR CCA 72 bp CTCCAGCAGGCTCCTTACCCCTTGAGGTTCCTCACCTaGGTTTGGGGACCTCAAGAGGACTGCTGCCCATCC +
Preference number: 3 (lower is better)
Translates to: LQQAPYPLRFLT*VWGPQEDCCPS
Trigger: GGATGGGCAGCAGTCCTCTTGAGGTCCCCAAACCCAGGTGAGGAACCTCAAGGGGTAAGGAGCCTGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR CAA 90 bp TCAGCTGAGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTATCAAGCTGCCTGAGTaGGTGCTCCTGCCGGGGCAA +
Preference number: 3 (lower is better)
Translates to: SAETGAGNGCGLSASQGAIKLPE*VLLPGQ
Trigger: TTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGAT...AGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCTCAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
3UTR GCA 72 bp CTCCCGGTGAGTGCTCCAAGACCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGCCTCGATCTTTGTGTC +
Preference number: 3 (lower is better)
Translates to: LPVSAPRPGRSR*LGWLCCLDLCV
Trigger: GACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGGTCTTGGAGCACTCACCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR GCA 72 bp AGGAGTCTGTGTGCAGGACAGGCCGGTCCTGAATACTaGCACAGCCCGATACCAGCTGCCAGCTGCCAAAGT +
Preference number: 3 (lower is better)
Translates to: RSLCAGQAGPEY*HSPIPAASCQS
Trigger: ACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
3UTR GCA 72 bp CTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTaGCCCGGAGCCCAACACCACGGGCAAACTGTTCTA +
Preference number: 3 (lower is better)
Translates to: LWAVSFTRCWCL*PGAQHHGQTVL
Trigger: TAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR GCA 72 bp AAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTaGTTGTGCCCCGGAGCCCAACACCACGGGCAAACT +
Preference number: 3 (lower is better)
Translates to: KWLWAVSFTRCW*LCPGAQHHGQT
Trigger: AGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR-3UTR CAA 90 bp CTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGCAGCCTTGTCTCCCGGTCACCAGTCAGGAGGTaGGGAGGTAGAAAGTCCCAT +
Preference number: 3 (lower is better)
Translates to: LLYAAKKADRTSCSLVSRSPVRR*GGRKSH
Trigger: ATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGA...CCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000151149.2
3UTR-3UTR CAA 90 bp CACATCCTCCAGCAGGCTCCTTACCCCTTGAGGTTCCTCACCTGGGTTTGGGGACGCTGCCTAGGCTGGTaGTGCTGCCTCGATCTTTGT +
Preference number: 3 (lower is better)
Translates to: HILQQAPYPLRFLTWVWGRCLGW*CCLDLC
Trigger: ACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCG...TCCCCAAACCCAGGTGAGGAACCTCAAGGGGTAAGGAGCCTGCTGGAGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR-3UTR CAA 90 bp GGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTGCCCAAAATCTCCTCCCCTTaGCTGAGCCGATCTACCAAC +
Preference number: 3 (lower is better)
Translates to: GREMAVGCQLHKVLVLVPKISSP*LSRSTN
Trigger: GTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTT...GGGCACAAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR CAA 90 bp TCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTGAAGCTCCCCACAGCTCCCGGAAAATCTCCTCCCCTTaGCTGAGCCGATCTACCAAC +
Preference number: 3 (lower is better)
Translates to: SCRGKFHSLIAEAPHSSRKISSP*LSRSTN
Trigger: GTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTT...CCGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR CAA 90 bp AAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGACGCTGCCTAGGCTGGTaGTGCTGCCTCGATCTTTGT +
Preference number: 3 (lower is better)
Translates to: KSHPQACSGLGLPCVQQRRCLGW*CCLDLC
Trigger: ACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCG...TCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR GCA 72 bp CTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTaGAGCCTTGTCTCCCGGTCACTCAGAGCTGTAAGT +
Preference number: 3 (lower is better)
Translates to: LLYAAKKADRTS*SLVSRSLRAVS
Trigger: ACTTACAGCTCTGAGTGACCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129883.8
ENSMUST00000148523.8
ENSMUST00000151149.2
3UTR CCA 72 bp GAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTaGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGG +
Preference number: 3 (lower is better)
Translates to: EVESPILRPAQV*GCHVCNREGGW
Trigger: CCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR CCA 72 bp ACACCAGGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTaGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCC +
Preference number: 3 (lower is better)
Translates to: TPGSVEGSEWRE*SPVRRLGGRKS
Trigger: GGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR CCA 72 bp CCAAAGTCTGTGGAGAGAGAGGATCCGGGCAGGGGATaGTCCACTGATCTGGGTTTGGGGACCTCAAGAGGA +
Preference number: 3 (lower is better)
Translates to: PKSVEREDPGRG*STDLGLGTSRG
Trigger: TCCTCTTGAGGTCCCCAAACCCAGATCAGTGGACCATCCCCTGCCCGGATCCTCTCTCTCCACAGACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR CAA 90 bp TGCCTGAGTTGGTGCTCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTGAAGCTTCCACTGATCTGGGTTaGGGGACCTCAAGAGGACTG +
Preference number: 3 (lower is better)
Translates to: CLSWCSCRGKFHSLIAEASTDLG*GTSRGL
Trigger: CAGTCCTCTTGAGGTCCCCAAACCCAGATCAGTGGA...AGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGAGCACCAACTCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR TCA 72 bp GACAGTAATCTGAACACCAGGGTCAGTGGAAGGCAGTaGGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGG +
Preference number: 3 (lower is better)
Translates to: DSNLNTRVSGRQ*VARVVTSQEVG
Trigger: CCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCCTGGTGTTCAGATTACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR GCA 72 bp GAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTaGCATGTGTGCAACAGAGAAGGGGGATGGGAAATT +
Preference number: 3 (lower is better)
Translates to: ESPILRPAQVWG*HVCNREGGWEI
Trigger: AATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000134945.8
ENSMUST00000151149.2
3UTR-3UTR CAA 90 bp GTTGCTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCGTGCTGCCTCGATCTTaGTGTCTCAACATGCAGATA +
Preference number: 3 (lower is better)
Translates to: VAARSPTVLLYAAKKADRVLPRS*CLNMQI
Trigger: TATCTGCATGTTGAGACACAAAGATCGAGGCAGCAC...GCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
3UTR-3UTR CAA 90 bp TCCGGTCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTAGGAGGTTACACTTCTaGTTCTCCACCATCAGGTCA +
Preference number: 3 (lower is better)
Translates to: SGPSLRYSVPAARCHHLCRRLHF*FSTIRS
Trigger: TGACCTGATGGTGGAGAACAAGAAGTGTAACCTCCT...ACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGACCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR GCA 72 bp CCAAGACCAGGGAGAAGTCGCTGCCTAGGCTGGTTGTaGTGCCTCGATCTTTGTGTCTCAACATGCAGATAT +
Preference number: 3 (lower is better)
Translates to: PRPGRSRCLGWL*CLDLCVSTCRY
Trigger: ATATCTGCATGTTGAGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGGTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR CAA 90 bp GTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGCAGTTTAGCCTGCATCCCGAGTaGGCAAACTCTTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: VYQQPAVIISVHDEKQQFSLHPE*ANSSSS
Trigger: AGAGGAGGAAGAGTTTGCCAACTCGGGATGCAGGCT...AAACTGCTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR GCA 72 bp AGACCAGGGAGAAGTCGCTGCCTAGGCTGGTTGTGCTaGCTCGATCTTTGTGTCTCAACATGCAGATATCTT +
Preference number: 3 (lower is better)
Translates to: RPGRSRCLGWLC*LDLCVSTCRYL
Trigger: AAGATATCTGCATGTTGAGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR CCA 72 bp CATAAATGTGATATACTCCACTTCCAACCTCGACAATaGAGGAAGGCCAGCCACATCCTCCAGCAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: HKCDILHFQPRQ*RKASHILQQAP
Trigger: AGGAGCCTGCTGGAGGATGTGGCTGGCCTTCCTCCATTGTCGAGGTTGGAAGTGGAGTATATCACATTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
3UTR TCA 72 bp TGGGTTTGGGGACCTCAAGAGGACTGCTGCCCATCCTaGAAAAGTTGTCAGAATGGTTTGAGGATGAAGAGC +
Preference number: 3 (lower is better)
Translates to: WVWGPQEDCCPS*KSCQNGLRMKS
Trigger: GCTCTTCATCCTCAAACCATTCTGACAACTTTTTCAGGATGGGCAGCAGTCCTCTTGAGGTCCCCAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
3UTR-3UTR CAA 90 bp GATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGGTGCTGCCTCGATCTTaGTGTCTCAACATGCAGATA +
Preference number: 3 (lower is better)
Translates to: DTVYQQPAVIISVHDEKQVLPRS*CLNMQI
Trigger: TATCTGCATGTTGAGACACAAAGATCGAGGCAGCAC...CTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR TCA 90 bp TGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGGCACCCCCACAGCTCCCGGTaGGTGCTCCAAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: CPGAQHHGQTVLAGPRWHPHSSR*VLQDQG
Trigger: TCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGG...GTGCCATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000148523.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp CCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGGCACCAGCCCCACAGCTCCCGGTaGGTGCTCCAAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: PGAQHHGQTVLAGPRWHQPHSSR*VLQDQG
Trigger: TCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGG...CTGGTGCCATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148523.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp TGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGGCACTCCTTGGCACGGTACTaGGTCCGGGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: CPGAQHHGQTVLAGPRWHSLARY*VRENSS
Trigger: GGAGGAGTTCTCCCGGACTCAGTACCGTGCCAAGGA...GTGCCATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp CTCTCCAGGGCCCCTTTTGCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGGGTCCGGTCCCAGCCTaGGATACAGTGTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSRAPFARPGLIPQGSAEGPVPA*DTVYQQ
Trigger: CTGCTGGTACACTGTATCTCAGGCTGGGACCGGACC...CTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000148523.8
CDS-3UTR TCA 90 bp CATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGCCCCACAGCTCCCGGTaGGTGCTCCAAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: HPQACSGLGLPCVQQRRGPHSSR*VLQDQG
Trigger: TCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGG...CCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp CTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGCAGCCTTGTCTCCCGGTTCCTCCAAGCTGCCTaGGTTGGTGCTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLYAAKKADRTSCSLVSRFLQAA*VGAPAG
Trigger: CCCGGCAGGAGCACCAACTCAGGCAGCTTGGAGGAA...CCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp CTTGTGCCCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGCCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVPRSPTPRANCSSRPPMPGRSR*LGWLCC
Trigger: GCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGG...CATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGGGCACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148523.8
ENSMUST00000151149.2
CDS-3UTR CCA 90 bp CCGGTCCTGAATACTGCCACAGCCCGATACCAGCTGCCAGCTGCCAAAGTCTGTTCCCGCCGCTGTCCTTaGCACGGTACTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PVLNTATARYQLPAAKVCSRRCP*HGTESG
Trigger: CCCGGACTCAGTACCGTGCCAAGGACAGCGGCGGGA...ACAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp CTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGCAGCCTTGTCTCCCGGTCACCAAGCTGCCTGAGTTaGTGCTCCTGCCGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LYAAKKADRTSCSLVSRSPSCLS*CSCRGK
Trigger: CTTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGG...TGACCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp TCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGTCCTTGGCACGGTACTaGGTCCGGGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGLLRFGAAMCATEKGDGSLARY*VRENSS
Trigger: GGAGGAGTTCTCCCGGACTCAGTACCGTGCCAAGGA...CCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGCAGCCTTGTCTCCGGTCCGGTCCCAGCCTaGGATACAGTGTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLLYAAKKADRTSCSLVSGPVPA*DTVYQQ
Trigger: CTGCTGGTACACTGTATCTCAGGCTGGGACCGGACC...GGAGACAAGGCTGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR TCA 90 bp CCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGCCACAGTCTCATAGCTaGAGCTCCCCACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PSSGLLRFGAAMCATEKGPQSHS*SSPQLP
Trigger: CGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGG...CCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTTCCTCCAAGCTGCCTaGGTTGGTGCTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: WEVESPILRPAQVWGCHVFLQAA*VGAPAG
Trigger: CCCGGCAGGAGCACCAACTCAGGCAGCTTGGAGGAA...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp GGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGCCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQWKAVSGESGHQSGGWEPGRSR*LGWLCC
Trigger: GCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGG...CTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp CAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGGTAAGGTGCTGGTGCTTGTaGCCCGGAGCCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: QWKAVSGESGHQSGGWEVRCWCL*PGAQHH
Trigger: GTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCT...TACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp CCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGTGGCACCAGAGGGACTaGGGGTTGCTGCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: PILRPAQVWGCHVCNREGWHQRD*GLLLEV
Trigger: GACTTCGAGCAGCAACCCCCAGTCCCTCTGGTGCCA...CCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR TCA 90 bp CAGGACAGGCCGGTCCTGAATACTGCCACAGCCCGATACCAGCTGCCAGCTGCCTCTCCTCCCCTTTGCTaGGCCGATCTACCAACATGT +
Preference number: 4 (lower is better)
Translates to: QDRPVLNTATARYQLPAASPPLC*ADLPTC
Trigger: ACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGA...GGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR TCA 90 bp CAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGGTACCACAGTCTCATAGCTaGAGCTCCCCACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QWKAVSGESGHQSGGWEVPQSHS*SSPQLP
Trigger: CGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGG...TACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp GAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCCCACAGTCTCATAGCTaGAGCTCCCCACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EWSPVRRLGGRKSHPQACPQSHS*SSPQLP
Trigger: CGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGG...GCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp AAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGATTCCTCCAAGCTGCCTaGGTTGGTGCTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: KSHPQACSGLGLPCVQQRFLQAA*VGAPAG
Trigger: CCCGGCAGGAGCACCAACTCAGGCAGCTTGGAGGAA...TCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGCAGGGGATGGTCCACTaGTCTGGGTTTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: WEVESPILRPAQVWGCHVQGMVH*SGFGDL
Trigger: GAGGTCCCCAAACCCAGATCAGTGGACCATCCCCTG...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR GCA 90 bp GAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCCCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EWSPVRRLGGRKSHPQACPGRSR*LGWLCC
Trigger: GCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGG...GCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp CCGGTCCTGAATACTGCCACAGCCCGATACCAGCTGCCAGCTGCCAAAGTCTGTCCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PVLNTATARYQLPAAKVCPGRSR*LGWLCC
Trigger: GCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGG...ACAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR GCA 90 bp CATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGGCCGGTCCTGAATACTaGCACAGCCCGATACCAGCT +
Preference number: 4 (lower is better)
Translates to: HPQACSGLGLPCVQQRRGAGPEY*HSPIPA
Trigger: AGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGC...CCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp AGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGGCAGACCGCACCTCCTaGAGCCTTGTCTCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: RKSHPQACSGLGLPCVQQADRTS*SLVSRS
Trigger: TGACCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGC...CTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
3UTR CAA 72 bp AAGGCCAGCCACATCCTCCAGCAGGCTCCTTACCCCTaGAGGTTCCTCACCTGGGTTTGGGGACCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: KASHILQQAPYP*RFLTWVWGPQE
Trigger: CTCTTGAGGTCCCCAAACCCAGGTGAGGAACCTCAAGGGGTAAGGAGCCTGCTGGAGGATGTGGCTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR TCA 90 bp ATCCTACTTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCCCCACAGCTCCCGGTaGGTGCTCCAAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: ILLRNSPKLQPFIQHEARPHSSR*VLQDQG
Trigger: TCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGG...CCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAAGTAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR TCA 90 bp TCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGACTCTGTGGGGAGGATaGGTGACTCTTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SGLLRFGAAMCATEKGDGTLWGG*VTLPPS
Trigger: GCTTGGAGGAAGAGTCACTCATCCTCCCCACAGAGT...CCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp AGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTAGGACAGGCCGGTCCTaGATACTGCCACAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: SGHQSGGWEVESPILRPARTGRS*ILPQPD
Trigger: ATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCT...AGCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp TCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTGAAGCTCCCCACAGCTCCCGGACCACTCCTTGCCTTTaGACAGGATCACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCRGKFHSLIAEAPHSSRTTPCL*TGSLGR
Trigger: TCTGCCCAGTGATCCTGTTCAAAGGCAAGGAGTGGT...CCGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR GCA 90 bp GTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAACAGCTCCCGGTGAGTaGTCCAAGACCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VEGSEWREWSPVRRLGGRTAPGE*SKTREK
Trigger: CTTCTCCCTGGTCTTGGAGCACTCACCGGGAGCTGT...TCTACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp GACTGGGGGTTGCTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGACAGCTCCCGGTGAGTaGTCCAAGACCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DWGLLLEVPLCCCMQPRRTAPGE*SKTREK
Trigger: CTTCTCCCTGGTCTTGGAGCACTCACCGGGAGCTGT...CCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAACCCCCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148523.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGGCCGGTCCTGAATACTaGCACAGCCCGATACCAGCT +
Preference number: 4 (lower is better)
Translates to: WEVESPILRPAQVWGCHVAGPEY*HSPIPA
Trigger: AGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGC...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp CTACTTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGAGGTGCTGGTGCTTGTaGCCCGGAGCCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: LLRNSPKLQPFIQHEARQRCWCL*PGAQHH
Trigger: GTGGTGTTGGGCTCCGGGGCACAAGCACCAGCACCT...CTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR GCA 90 bp CATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATACCAGCTGCCAGCTaGCAAAGTCTGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: HPQACSGLGLPCVQQRRGIPAAS*QSLGLG
Trigger: CCCCAAACCCAGACTTTGGCAGCTGGCAGCTGGTAT...CCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151149.2
CDS-3UTR CCA 90 bp TTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAATCCCGCCGCTGTCCTTaGCACGGTACTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: FVTPPNSNPSFSTRPGSESRRCP*HGTESG
Trigger: CCCGGACTCAGTACCGTGCCAAGGACAGCGGCGGGA...TTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp TCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGATCCGGGCAGGGGATaGTCCACTGATCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SHPQACSGLGLPCVQQRRDPGRG*STDLGL
Trigger: CAAACCCAGATCAGTGGACCATCCCCTGCCCGGATC...CCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR CCA 90 bp AAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGTGGCACCAGAGGGACTaGGGGTTGCTGCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: KVPSSGLLRFGAAMCATEWHQRD*GLLLEV
Trigger: GACTTCGAGCAGCAACCCCCAGTCCCTCTGGTGCCA...CTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp CAGCTGAGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGCCAAAGTCTGGGTTTaGGGACCTCAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: QLRQGREMAVGCQLHKVLAKVWV*GPQEDC
Trigger: GCAGTCCTCTTGAGGTCCCCAAACCCAGACTTTGGC...CAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCTCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp CAGGACAGGCCGGTCCTGAATACTGCCACAGCCCGATACCAGCTGCCAGCTGCCCAAAGTCCTCTTCTGTaGCATCTTCTGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: QDRPVLNTATARYQLPAAQSPLL*HLLYLP
Trigger: GGGCAAGTACAGAAGATGTCACAGAAGAGGACTTTG...GGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAACCAGGTCCCAACTCTaGTACTGGCTCCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: GSVEGSEWREWSPVRRLGTRSQL*YWLQSM
Trigger: CATTGACTGGAGCCAGTATCAGAGTTGGGACCTGGT...TCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp CCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGTCTCCTCCCCTTTGCTaGGCCGATCTACCAACATGT +
Preference number: 4 (lower is better)
Translates to: PILRPAQVWGCHVCNREGSPPLC*ADLPTC
Trigger: ACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGA...CCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR GCA 90 bp GCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGACAGGGGCGGGAAATGGCACCTTATCAAAAAGGTaGGTGTCACCACTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: ARPGLIPQGSAETGAGNGTLSKR*VSPLRR
Trigger: TCTTCGGAGTGGTGACACGCACCTTTTTGATAAGGT...GCCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp ATCCTACTTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGGCAGACCGCACCTCCTaGAGCCTTGTCTCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: ILLRNSPKLQPFIQHEARADRTS*SLVSRS
Trigger: TGACCGGGAGACAAGGCTGCAGGAGGTGCGGTCTGC...CCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAAGTAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR GCA 90 bp CAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGCAGCGGGACTGGGGGTTGCTaGTCGAAGTCCCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: QTPTLHSARGQAVKIPSSGTGGC*SKSHCA
Trigger: AGCACAGTGGGACTTCGAGCAGCAACCCCCAGTCCC...GCTGCTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR GCA 90 bp GCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCGGGACTGGGGGTTGCTaGTCGAAGTCCCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: AQVWGCHVCNREGGWEISGTGGC*SKSHCA
Trigger: AGCACAGTGGGACTTCGAGCAGCAACCCCCAGTCCC...GGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp GTTGCTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCGACCTCTGCACCTaGCCATCTTGCTTCGGTGAA +
Preference number: 4 (lower is better)
Translates to: VAARSPTVLLYAAKKADRTDLCT*PSCFGE
Trigger: TTCACCGAAGCAAGATGGCCAGGTGCAGAGGTCGGT...GCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp TCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGCCTGCATCCCGAGTTaGCAAACTCTTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSGLLRFGAAMCATEKGDACIPS*QTLPPL
Trigger: CAGAGGAGGAAGAGTTTGCCAACTCGGGATGCAGGC...ATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp TGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCCAAGCTGCCTGAGTTaGTGCTCCTGCCGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CSGLGLPCVQQRRGMGNFPSCLS*CSCRGK
Trigger: CTTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGG...GAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR CCA 90 bp GGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGGATGGTCCACTGATCTaGGTTTGGGGACCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: GQWKAVSGESGHQSGGWEDGPLI*VWGPQE
Trigger: CTCTTGAGGTCCCCAAACCCAGATCAGTGGACCATC...CTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR CCA 90 bp CTCTCCAGGGCCCCTTTTGCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGGATCTTTGTGTCCTCTaGGTCTTCAGGCAGAACTCT +
Preference number: 4 (lower is better)
Translates to: LSRAPFARPGLIPQGSAEDLCVL*VFRQNS
Trigger: AGAGTTCTGCCTGAAGACCCAGAGGACACAAAGATC...CTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR TCA 90 bp TCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGGCCATCTTGCTTCGGTaGATGAGGTCTTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: SGLLRFGAAMCATEKGDGAILLR*MRSCNL
Trigger: CAAGTTGCAAGACCTCATTCACCGAAGCAAGATGGC...CCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATACCAGGTCCCAACTCTaGTACTGGCTCCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: SSGLLRFGAAMCATEKGDTRSQL*YWLQSM
Trigger: CATTGACTGGAGCCAGTATCAGAGTTGGGACCTGGT...ATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCTCCTCCCCTTTGCTaGGCCGATCTACCAACATGT +
Preference number: 4 (lower is better)
Translates to: EWSPVRRLGGRKSHPQACSPPLC*ADLPTC
Trigger: ACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGA...GCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR TCA 90 bp CCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGACTCTGTGGGGAGGATaGGTGACTCTTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PPNSNPSFSTRPGSEDSETLWGG*VTLPPS
Trigger: GCTTGGAGGAAGAGTCACTCATCCTCCCCACAGAGT...CTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR TCA 90 bp AGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGACTCTGTGGGGAGGATaGGTGACTCTTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RKSHPQACSGLGLPCVQQTLWGG*VTLPPS
Trigger: GCTTGGAGGAAGAGTCACTCATCCTCCCCACAGAGT...CTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp CCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGAAGACTTGGCTTCAGTaGGCCCATGGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PSSGLLRFGAAMCATEKGKTWLQ*AHGVKV
Trigger: TACCTTCACACCATGGGCTCACTGAAGCCAAGTCTT...CCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp GAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCATACCAGCTGCCAGCTaGCAAAGTCTGTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EWSPVRRLGGRKSHPQACIPAAS*QSLWRE
Trigger: CTCTCTCCACAGACTTTGGCAGCTGGCAGCTGGTAT...GCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR GCA 90 bp GAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCGAAGTCCCACTGTGCTaGTGTATGCAGCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EWSPVRRLGGRKSHPQACEVPLC*CMQPRR
Trigger: CCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTC...GCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp AAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAACCGACCTCTGCACCTaGCCATCTTGCTTCGGTGAA +
Preference number: 4 (lower is better)
Translates to: KSHPQACSGLGLPCVQQRTDLCT*PSCFGE
Trigger: TTCACCGAAGCAAGATGGCCAGGTGCAGAGGTCGGT...TCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp AGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTGTTGGGGATGTTCAATaGGGCATCGACGTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RQGREMAVGCQLHKVLVLVGDVQ*GIDVVL
Trigger: CAGGACTACGTCGATGCCCCATTGAACATCCCCAAC...AAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp AAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGCCACTGATCTGGGTTTaGGGACCTCAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: KVPSSGLLRFGAAMCATEPLIWV*GPQEDC
Trigger: GCAGTCCTCTTGAGGTCCCCAAACCCAGATCAGTGG...CTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR TCA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGGCCATCTTGCTTCGGTaGATGAGGTCTTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: WEVESPILRPAQVWGCHVAILLR*MRSCNL
Trigger: CAAGTTGCAAGACCTCATTCACCGAAGCAAGATGGC...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATAGATATCTTCCACAGTaGAGCCTGCATCCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSGLLRFGAAMCATEKGDRYLPQ*SLHPEL
Trigger: CAACTCGGGATGCAGGCTTCACTGTGGAAGATATCT...ATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR TCA 90 bp TCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGAAGACTTGGCTTCAGTaGGCCCATGGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SKSHCAAVCSQEGRPHLLKTWLQ*AHGVKV
Trigger: TACCTTCACACCATGGGCTCACTGAAGCCAAGTCTT...CAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp GAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCGGCTTCAGGGATGTGTaGATTAGCCCATCCATCTCT +
Preference number: 4 (lower is better)
Translates to: EWSPVRRLGGRKSHPQACGFRDV*ISPSIS
Trigger: AGAGATGGATGGGCTAATTCACACATCCCTGAAGCC...GCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp TGCTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACGAGGAGAGTGAAGTTTaGATAGCGCTGGGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: CCSKSHCAAVCSQEGRPHEESEV*IALGFV
Trigger: GACAAAGCCCAGCGCTATGCAAACTTCACTCTCCTC...GTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp GAAGAAAATCTCCTCCCCTTTGCTGAGCCGATCTACCAACATGTGTCCAAAGAGTCCCGCCGCTGTCCTTaGCACGGTACTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: EENLLPFAEPIYQHVSKESRRCP*HGTESG
Trigger: CCCGGACTCAGTACCGTGCCAAGGACAGCGGCGGGA...CTCTTTGGACACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
CDS-3UTR CCA 90 bp GCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGACAGGGGCGGGAAATGGCTTCACAACCTGGATATaGAATAGAGAGGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: ARPGLIPQGSAETGAGNGFTTWI*NREESE
Trigger: TTCACTCTCCTCTCTATTCCATATCCAGGTTGTGAA...GCCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp AGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGGTTGGGGATGTTCAATaGGGCATCGACGTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKSHPQACSGLGLPCVQQVGDVQ*GIDVVL
Trigger: CAGGACTACGTCGATGCCCCATTGAACATCCCCAAC...CTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp GGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAAAACTCTTCCTCCTCTaGGTCTTCAGGCAGAACTCT +
Preference number: 4 (lower is better)
Translates to: GSVEGSEWREWSPVRRLGKLFLL*VFRQNS
Trigger: AGAGTTCTGCCTGAAGACCCAGAGGAGGAAGAGTTT...TCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp CCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGCAGGCCTGCATCCCGAGTTaGCAAACTCTTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PNSNPSFSTRPGSEDSEQACIPS*QTLPPL
Trigger: CAGAGGAGGAAGAGTTTGCCAACTCGGGATGCAGGC...CTGCTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR TCA 90 bp TCAGAGATTGAGTCAGGAAGTTGGGGATGTTCAATGGGGCATCGACGTAGTCCTTCCTTGGCACGGTACTaGGTCCGGGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SEIESGSWGCSMGHRRSPSLARY*VRENSS
Trigger: GGAGGAGTTCTCCCGGACTCAGTACCGTGCCAAGGA...AGGACTACGTCGATGCCCCATTGAACATCCCCAACTTCCTGACTCAATCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR TCA 90 bp GCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCACCTGCACAGTGCTCTaGAATGTGTCTTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ARSPTVLLYAAKKADRTSTCTVL*NVSFSF
Trigger: GAAAGAGAAAGACACATTTCAGAGCACTGTGCAGGT...GGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGCAAAGTCCTCTTCTGTaGCATCTTCTGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: WEVESPILRPAQVWGCHVQSPLL*HLLYLP
Trigger: GGGCAAGTACAGAAGATGTCACAGAAGAGGACTTTG...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GCTGAGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTTCAATGTTCAGAGATTaGGTCAGGAAGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: AETGAGNGCGLSASQGAGSMFRD*VRKLGM
Trigger: CATCCCCAACTTCCTGACTCAATCTCTGAACATTGA...ACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp AGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAAGACTTGGCTTCAGTaGGCCCATGGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RKSHPQACSGLGLPCVQQKTWLQ*AHGVKV
Trigger: TACCTTCACACCATGGGCTCACTGAAGCCAAGTCTT...CTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp TCCTGCCGGGGCAAGTTCCACAGTCTCATAGCTGAAGCTCCCCACAGCTCCCGGTGTTCACCTGCACAGTaGTCTGAAATGTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SCRGKFHSLIAEAPHSSRCSPAQ*SEMCLS
Trigger: AGAAAGACACATTTCAGAGCACTGTGCAGGTGAACA...CCGGGAGCTGTGGGGAGCTTCAGCTATGAGACTGTGGAACTTGCCCCGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
CDS-3UTR GCA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGGACATCTTCTGTACTTaGCCAGGTATCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WEVESPILRPAQVWGCHVDIFCT*PGIICS
Trigger: GGAGCAGATGATACCTGGGCAAGTACAGAAGATGTC...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp GAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGCAGACATCTTCTGTACTTaGCCAGGTATCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EVPLCCCMQPRRQTAPPADIFCT*PGIICS
Trigger: GGAGCAGATGATACCTGGGCAAGTACAGAAGATGTC...TGCAGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp AAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGGAGGAGAGTGAAGTTTaGATAGCGCTGGGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KVPSSGLLRFGAAMCATEEESEV*IALGFV
Trigger: GACAAAGCCCAGCGCTATGCAAACTTCACTCTCCTC...CTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp CCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGTTCCACAGTGAAGCCTaGATCCCGAGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: PPNSNPSFSTRPGSEDSEFHSEA*IPSWQT
Trigger: AGTTTGCCAACTCGGGATGCAGGCTTCACTGTGGAA...CTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR CCA 90 bp CATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCCCTGCTCTCCAGGGCCCCTTTGAACAGGATCACTaGGCAGACAAACCGACCTCT +
Preference number: 4 (lower is better)
Translates to: HVCNREGGWEISPALQGPFEQDH*ADKPTS
Trigger: AGAGGTCGGTTTGTCTGCCCAGTGATCCTGTTCAAA...GGGGCCCTGGAGAGCAGGGGAAATTTCCCATCCCCCTTCTCTGTTGCACACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAACCTGCACAGTGCTCTaGAATGTGTCTTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VEGSEWREWSPVRRLGGRTCTVL*NVSFSF
Trigger: GAAAGAGAAAGACACATTTCAGAGCACTGTGCAGGT...TCTACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TCAGCTGAGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTAAATATGCTTGCCTTTaGACAGGATCACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SAETGAGNGCGLSASQGAKYACL*TGSLGR
Trigger: TCTGCCCAGTGATCCTGTTCAAAGGCAAGCATATTT...AGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCTCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTCAATGTTCAGAGATTaGGTCAGGAAGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: WEVESPILRPAQVWGCHVSMFRD*VRKLGM
Trigger: CATCCCCAACTTCCTGACTCAATCTCTGAACATTGA...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGCAGTTTCATCCACTCTTGGTCCTaGGGGTGGGACAGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: CTSSPLSSSLFMMKSSSFIHSWS*GWDRAG
Trigger: TCCGGCTCTGTCCCACCCTCAGGACCAAGAGTGGAT...GAAACTGCTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203385.2
CDS-3UTR GCA 90 bp GCCAGCTGCCAAAGTCTGTGGAGAGAGAGGATCCGGGCAGGGGATGGTCCACTGAGGAGGTTACATTCATaGCAAACTTCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ASCQSLWRERIRAGDGPLRRLHS*QTSPSC
Trigger: ACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCT...CAGTGGACCATCCCCTGCCCGGATCCTCTCTCTCCACAGACTTTGGCAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp GCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCTTCCACAGTGAAGCCTaGATCCCGAGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: AQVWGCHVCNREGGWEISFHSEA*IPSWQT
Trigger: AGTTTGCCAACTCGGGATGCAGGCTTCACTGTGGAA...GGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp CAGCTGCCAGCTGCCAAAGTCTGTGGAGAGAGAGGATCCGGGCAGGGGATGGTCGAAGAATTCACAACCTaGATATGGAATAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: QLPAAKVCGERGSGQGMVEEFTT*IWNREE
Trigger: CTCCTCTCTATTCCATATCCAGGTTGTGAATTCTTC...GACCATCCCCTGCCCGGATCCTCTCTCTCCACAGACTTTGGCAGCTGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp TACTGCCACAGCCCGATACCAGCTGCCAGCTGCCAAAGTCTGTGGAGAGAGAGGATTGAGTCAGGAAGTTaGGGATGTTCAATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: YCHSPIPAASCQSLWRERIESGS*GCSMGH
Trigger: ATGCCCCATTGAACATCCCCAACTTCCTGACTCAAT...CCTCTCTCTCCACAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp GCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGACAGGGGCGGGAAATGGCAAAAAGTTGTCAGAATaGTTTGAGGATGAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: ARPGLIPQGSAETGAGNGKKLSE*FEDEEL
Trigger: TAGCTCTTCATCCTCAAACCATTCTGACAACTTTTT...GCCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR GCA 90 bp CCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGAGGAGGTTACATTCATaGCAAACTTCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PILRPAQVWGCHVCNREGRRLHS*QTSPSC
Trigger: ACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCT...CCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp TTTGCTGACATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAAGAAGTCCCACTGTGCTaGTGTATGCAGCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FADIIISMRPWERPCTLQEVPLC*CMQPRR
Trigger: CCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTC...TTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATGTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp GGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGAAGAATTCACAACCTaGATATGGAATAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSVEGSEWREWSPVRRLGEEFTT*IWNREE
Trigger: CTCCTCTCTATTCCATATCCAGGTTGTGAATTCTTC...TCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp CCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGATTGAGTCAGGAAGTTaGGGATGTTCAATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PPNSNPSFSTRPGSEDSEIESGS*GCSMGH
Trigger: ATGCCCCATTGAACATCCCCAACTTCCTGACTCAAT...CTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp CTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCCAAACTCTTCCTCCTCTaGGTCTTCAGGCAGAACTCT +
Preference number: 4 (lower is better)
Translates to: LRFGAAMCATEKGDGKFPKLFLL*VFRQNS
Trigger: AGAGTTCTGCCTGAAGACCCAGAGGAGGAAGAGTTT...GGGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CCA 90 bp CTCTCCAGGGCCCCTTTTGCCAGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGAAAAAGTTGTCAGAATaGTTTGAGGATGAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LSRAPFARPGLIPQGSAEKKLSE*FEDEEL
Trigger: TAGCTCTTCATCCTCAAACCATTCTGACAACTTTTT...CTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCTGGCAAAAGGGGCCCTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR TCA 90 bp TGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCATTTGGAATCACGCTaGAACAGTAGTCACGGCCAA +
Preference number: 4 (lower is better)
Translates to: CSGLGLPCVQQRRGMGNFHLESR*NSSHGQ
Trigger: TTGGCCGTGACTACTGTTTCAGCGTGATTCCAAATG...GAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCTCTTGCTTCGGTGAATaGGGTCTTGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AQVWGCHVCNREGGWEISSCFGE*GLATCS
Trigger: TGAACAAGTTGCAAGACCTCATTCACCGAAGCAAGA...GGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TCCCAGCCTGAGATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGCAAAGTCCTCTTCTGTaGCATCTTCTGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: SQPEIQCTSSPLSSSLFMQSPLL*HLLYLP
Trigger: GGGCAAGTACAGAAGATGTCACAGAAGAGGACTTTG...CATGAACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144976.4
CDS-3UTR TCA 90 bp AGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGACAGATGTACTTGACTaGCAGGTATTGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RKSHPQACSGLGLPCVQQTDVLD*QVLKQL
Trigger: AAGCTGCTTCAATACCTGTCAGTCAAGTACATCTGT...CTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp CATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAACACAATTCAGATATCTTCCACAGTaGAGCCTGCATCCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: HYNLHEALGTPLYPPTQFRYLPQ*SLHPEL
Trigger: CAACTCGGGATGCAGGCTTCACTGTGGAAGATATCT...GAATTGTGTTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR GCA 90 bp CTACTTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGACCTTATCAAAAAGGTaGGTGTCACCACTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LLRNSPKLQPFIQHEARQTLSKR*VSPLRR
Trigger: TCTTCGGAGTGGTGACACGCACCTTTTTGATAAGGT...CTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp AACACAATTCTGAGAGTTGACAGTAATCTGAACACCAGGGTCAGTGGAAGGCAGACAGCTCCCGGTGAGTaGTCCAAGACCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NTILRVDSNLNTRVSGRQTAPGE*SKTREK
Trigger: CTTCTCCCTGGTCTTGGAGCACTCACCGGGAGCTGT...CTGCCTTCCACTGACCCTGGTGTTCAGATTACTGTCAACTCTCAGAATTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR CCA 90 bp CTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTTTCACAACCTGGATATaGAATAGAGAGGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LEVPLCCCMQPRRQTAPPFTTWI*NREESE
Trigger: TTCACTCTCCTCTCTATTCCATATCCAGGTTGTGAA...AGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp AGAAGTCGCTGCCTAGGCTGGTTGTGCTGCCTCGATCTTTGTGTCTCAACATGCTCTTGCTTCGGTGAATaGGGTCTTGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RSRCLGWLCCLDLCVSTCSCFGE*GLATCS
Trigger: TGAACAAGTTGCAAGACCTCATTCACCGAAGCAAGA...GCATGTTGAGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
CDS-3UTR TCA 90 bp TGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCAAATATGCTTGCCTTTaGACAGGATCACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CSGLGLPCVQQRRGMGNFKYACL*TGSLGR
Trigger: TCTGCCCAGTGATCCTGTTCAAAGGCAAGCATATTT...GAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GAAGCTGAAAGGGAGAGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTGAATACTACAGATGTACTTGACTaGCAGGTATTGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: EAERERGVCVQDRPVLNTTDVLD*QVLKQL
Trigger: AAGCTGCTTCAATACCTGTCAGTCAAGTACATCTGT...AGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp TGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGCAGTTTCGCCATCTTGCTTCGGTaGATGAGGTCTTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: CTSSPLSSSLFMMKSSSFAILLR*MRSCNL
Trigger: CAAGTTGCAAGACCTCATTCACCGAAGCAAGATGGC...GAAACTGCTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR TCA 90 bp TCAGAGATTGAGTCAGGAAGTTGGGGATGTTCAATGGGGCATCGACGTAGTCCTACCTGCACAGTGCTCTaGAATGTGTCTTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SEIESGSWGCSMGHRRSPTCTVL*NVSFSF
Trigger: GAAAGAGAAAGACACATTTCAGAGCACTGTGCAGGT...AGGACTACGTCGATGCCCCATTGAACATCCCCAACTTCCTGACTCAATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR GCA 90 bp CATTATAATCTCCATGAGGCCCTGGGAACGCCCCTGTACCCTCCAACACAATTCTGTTCACCTGCACAGTaGTCTGAAATGTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HYNLHEALGTPLYPPTQFCSPAQ*SEMCLS
Trigger: AGAAAGACACATTTCAGAGCACTGTGCAGGTGAACA...GAATTGTGTTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GAAGAAAATCTCCTCCCCTTTGCTGAGCCGATCTACCAACATGTGTCCAAAGAGTCTTGCTTCGGTGAATaGGGTCTTGCAACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EENLLPFAEPIYQHVSKESCFGE*GLATCS
Trigger: TGAACAAGTTGCAAGACCTCATTCACCGAAGCAAGA...CTCTTTGGACACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129883.8
ENSMUST00000142938.8
CDS-3UTR TCA 90 bp AGATTGAGTCAGGAAGTTGGGGATGTTCAATGGGGCATCGACGTAGTCCTGCTTACAGATGTACTTGACTaGCAGGTATTGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RLSQEVGDVQWGIDVVLLTDVLD*QVLKQL
Trigger: AAGCTGCTTCAATACCTGTCAGTCAAGTACATCTGT...AAGCAGGACTACGTCGATGCCCCATTGAACATCCCCAACTTCCTGACTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203385.2
CDS-3UTR GCA 90 bp GATACAGTGTACCAGCAGCCCGCTGTCATCATCTCTGTTCATGATGAAAAGCAGACCTTATCAAAAAGGTaGGTGTCACCACTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: DTVYQQPAVIISVHDEKQTLSKR*VSPLRR
Trigger: TCTTCGGAGTGGTGACACGCACCTTTTTGATAAGGT...CTGCTTTTCATCATGAACAGAGATGATGACAGCGGGCTGCTGGTACACTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000144976.4
CDS-3UTR CCA 90 bp AACACAATTCTGAGAGTTGACAGTAATCTGAACACCAGGGTCAGTGGAAGGCAGTTTGAACAGGATCACTaGGCAGACAAACCGACCTCT +
Preference number: 4 (lower is better)
Translates to: NTILRVDSNLNTRVSGRQFEQDH*ADKPTS
Trigger: AGAGGTCGGTTTGTCTGCCCAGTGATCCTGTTCAAA...CTGCCTTCCACTGACCCTGGTGTTCAGATTACTGTCAACTCTCAGAATTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR TCA 90 bp GTGGTAGAGCATTTATTTGCTTATAAACACAAGCCCGGGTTTCTTTCCCCAGCACATTTGGAATCACGCTaGAACAGTAGTCACGGCCAA +
Preference number: 4 (lower is better)
Translates to: VVEHLFAYKHKPGFLSPAHLESR*NSSHGQ
Trigger: TTGGCCGTGACTACTGTTTCAGCGTGATTCCAAATG...TGCTGGGGAAAGAAACCCGGGCTTGTGTTTATAAGCAAATAAATGCTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR GCA 90 bp GTGGTAGAGCATTTATTTGCTTATAAACACAAGCCCGGGTTTCTTTCCCCAGCATGTTCACCTGCACAGTaGTCTGAAATGTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VVEHLFAYKHKPGFLSPACSPAQ*SEMCLS
Trigger: AGAAAGACACATTTCAGAGCACTGTGCAGGTGAACA...TGCTGGGGAAAGAAACCCGGGCTTGTGTTTATAAGCAAATAAATGCTCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CCA 90 bp AACACAATTCTGAGAGTTGACAGTAATCTGAACACCAGGGTCAGTGGAAGGCAGAAAAAGTTGTCAGAATaGTTTGAGGATGAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: NTILRVDSNLNTRVSGRQKKLSE*FEDEEL
Trigger: TAGCTCTTCATCCTCAAACCATTCTGACAACTTTTT...CTGCCTTCCACTGACCCTGGTGTTCAGATTACTGTCAACTCTCAGAATTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR CCA 90 bp GTAATCCCGATCTTTATATTCCTTGAAGAATTCACAACCTGGATATGGAATAGATTTGAACAGGATCACTaGGCAGACAAACCGACCTCT +
Preference number: 4 (lower is better)
Translates to: VIPIFIFLEEFTTWIWNRFEQDH*ADKPTS
Trigger: AGAGGTCGGTTTGTCTGCCCAGTGATCCTGTTCAAA...TCTATTCCATATCCAGGTTGTGAATTCTTCAAGGAATATAAAGATCGGGATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS TCA 90 bp TCAACCTTAGAGCCGCTCTTCCCGCCGCTGTCCTTGGCACGGTACTaGGTCCGGGAGAACTCCTCCAGCAGCTCCCAGAGCCCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: STLEPLFPPLSLARY*VRENSSSSSQSPGS
Trigger: GGAGCCCGGGCTCTGGGAGCTGCTGGAGGAGTTCTCCCGGACTCAGTACCGTGCCAAGGACAGCGGCGGGAAGAGCGGCTCTAAGGTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000142938.8
CDS GCA 90 bp TCCCCACAGCTCCCGGTGAGTGCTCCAAGACCAGGGAGAAGTCGCTaGCTAGGCTGGTTGTGCTGCCTCGATCTTTGTGTCCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SPQLPVSAPRPGRSR*LGWLCCLDLCVLWV
Trigger: GACCCAGAGGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGGTCTTGGAGCACTCACCGGGAGCTGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR CAA 90 bp TGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTCCAAGCTGCCTGAGTaGGTGCTCCTGCCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: WEVESPILRPAQVWGCHVSKLPE*VLLPGQ
Trigger: TTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGGA...CACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTTCTACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR CAA 90 bp CAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGGTATCCAAGCTGCCTGAGTaGGTGCTCCTGCCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: QWKAVSGESGHQSGGWEVSKLPE*VLLPGQ
Trigger: TTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGGA...TACCTCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR CAA 90 bp GAGTGGTCACCAGTCAGGAGGTTGGGAGGTAGAAAGTCCCATCCTCAGGCCTGCACAAGGTGCTGGTGCTaGTGCCCCGGAGCCCAACAC +
Preference number: 5 (lower is better)
Translates to: EWSPVRRLGGRKSHPQACTRCWC*CPGAQH
Trigger: GTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGT...GCAGGCCTGAGGATGGGACTTTCTACCTCCCAACCTCCTGACTGGTGACCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CAA 90 bp CCCGGAGCCCAACACCACGGGCAAACTGTTCTAGCAGGCCCCCGATGGCACCAGATGAGGTCTTGCAACTaGTTCACCTGCACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: PGAQHHGQTVLAGPRWHQMRSCN*FTCTVL
Trigger: GAGCACTGTGCAGGTGAACAAGTTGCAAGACCTCAT...CTGGTGCCATCGGGGGCCTGCTAGAACAGTTTGCCCGTGGTGTTGGGCTCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp TCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGCGCTGCCTAGGCTGGTaGTGCTGCCTCGATCTTTGT +
Preference number: 5 (lower is better)
Translates to: SGLLRFGAAMCATEKGDGRCLGW*CCLDLC
Trigger: ACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCG...CCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS GCA 90 bp AAGGGAGAGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTGAATACTaGCACAGCCCGATACCAGCTGCCAGCTGCCAAAGTCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: KGERSLCAGQAGPEY*HSPIPAASCQSLGL
Trigger: CAAACCCAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCTCTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151149.2
CDS-3UTR CAA 90 bp GCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCTCCAAGCTGCCTGAGTaGGTGCTCCTGCCGGGGCAA +
Preference number: 5 (lower is better)
Translates to: AQVWGCHVCNREGGWEISSKLPE*VLLPGQ
Trigger: TTGCCCCGGCAGGAGCACCAACTCAGGCAGCTTGGA...GGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR CAA 90 bp CTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATGGGAAATTTCCCACAAGGTGCTGGTGCTaGTGCCCCGGAGCCCAACAC +
Preference number: 5 (lower is better)
Translates to: LRFGAAMCATEKGDGKFPTRCWC*CPGAQH
Trigger: GTGTTGGGCTCCGGGGCACAAGCACCAGCACCTTGT...GGGAAATTTCCCATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CAA 90 bp GGGTCAGTGGAAGGCAGTGAGTGGCGAGAGTGGTCACCAGTCAGGAGGTTGGGAGCTGTAAGTCTGGGTTaGGGGACCTCAAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: GSVEGSEWREWSPVRRLGAVSLG*GTSRGL
Trigger: CAGTCCTCTTGAGGTCCCCAAACCCAGACTTACAGC...TCCCAACCTCCTGACTGGTGACCACTCTCGCCACTCACTGCCTTCCACTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134945.8
CDS-3UTR CAA 90 bp ACAGCCCGATACCAGCTGCCAGCTGCCAAAGTCTGTGGAGAGAGAGGATCCGGGGTGCTGCCTCGATCTTaGTGTCCTCTGGGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TARYQLPAAKVCGERGSGVLPRS*CPLGLQ
Trigger: CTGAAGACCCAGAGGACACAAAGATCGAGGCAGCAC...CCCGGATCCTCTCTCTCCACAGACTTTGGCAGCTGGCAGCTGGTATCGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR CAA 90 bp AGGCCTGGCCTGATTCCACAGGGCTCAGCTGAGACAGGGGCGGGAAATGGCTGTAAAATCTCCTCCCCTTaGCTGAGCCGATCTACCAAC +
Preference number: 5 (lower is better)
Translates to: RPGLIPQGSAETGAGNGCKISSP*LSRSTN
Trigger: GTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTT...ACAGCCATTTCCCGCCCCTGTCTCAGCTGAGCCCTGTGGAATCAGGCCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000148523.8
CDS-3UTR CAA 90 bp TCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGATAGCCTGCATCCCGAGTaGGCAAACTCTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSGLLRFGAAMCATEKGDSLHPE*ANSSSS
Trigger: AGAGGAGGAAGAGTTTGCCAACTCGGGATGCAGGCT...ATCCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CAA 90 bp ACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCCGCTGCCTAGGCTGGTaGTGCTGCCTCGATCTTTGT +
Preference number: 5 (lower is better)
Translates to: TPPNSNPSFSTRPGSEDSRCLGW*CCLDLC
Trigger: ACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCG...GGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR CAA 90 bp GAAGCTGAAAGGGAGAGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTGAATACTCGCTGCCTAGGCTGGTaGTGCTGCCTCGATCTTTGT +
Preference number: 5 (lower is better)
Translates to: EAERERGVCVQDRPVLNTRCLGW*CCLDLC
Trigger: ACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCG...AGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR CAA 90 bp CATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGGGGCAAATATGCTTGCCTTaGAACAGGATCACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HPQACSGLGLPCVQQRRGQICLP*NRITGQ
Trigger: CTGCCCAGTGATCCTGTTCAAAGGCAAGCATATTTG...CCCCCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp TCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGAAGGAAAATCTCCTCCCCTTaGCTGAGCCGATCTACCAAC +
Preference number: 5 (lower is better)
Translates to: SHPQACSGLGLPCVQQRRKISSP*LSRSTN
Trigger: GTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTT...CCTTCTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CAA 90 bp AGACAGGGGCGGGAAATGGCTGTGGGCTGTCAGCTTCACAAGGTGCTGGTGCTTAAAATCTCCTCCCCTTaGCTGAGCCGATCTACCAAC +
Preference number: 5 (lower is better)
Translates to: RQGREMAVGCQLHKVLVLKISSP*LSRSTN
Trigger: GTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTT...AAGCACCAGCACCTTGTGAAGCTGACAGCCCACAGCCATTTCCCGCCCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS-3UTR CAA 90 bp CAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGAGCAGCTCCACTGATCTGGGTTaGGGGACCTCAAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: QTPTLHSARGQAVKIPSSSTDLG*GTSRGL
Trigger: CAGTCCTCTTGAGGTCCCCAAACCCAGATCAGTGGA...GCTGCTCGGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR CAA 90 bp AGGGAGAAGTCGCTGCCTAGGCTGGTTGTGCTGCCTCGATCTTTGTGTCTCAACCACCACTCCTTGCCTTaGAACAGGATCACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: REKSLPRLVVLPRSLCLNHHSLP*NRITGQ
Trigger: CTGCCCAGTGATCCTGTTCAAAGGCAAGGAGTGGTG...GTTGAGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR CAA 90 bp AGAGGAGTCTGTGTGCAGGACAGGCCGGTCCTGAATACTGCCACAGCCCGATACCAAATATGCTTGCCTTaGAACAGGATCACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RGVCVQDRPVLNTATARYQICLP*NRITGQ
Trigger: CTGCCCAGTGATCCTGTTCAAAGGCAAGCATATTTG...GTATCGGGCTGTGGCAGTATTCAGGACCGGCCTGTCCTGCACACAGACTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp ATCCTACTTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGAGCCTGCATCCCGAGTaGGCAAACTCTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ILLRNSPKLQPFIQHEARSLHPE*ANSSSS
Trigger: AGAGGAGGAAGAGTTTGCCAACTCGGGATGCAGGCT...CCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAAGTAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR CAA 90 bp CTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCAGACCGCACCTCCTGACCTGCAAATATGCTaGCCTTTGAACAGGATCACT +
Preference number: 5 (lower is better)
Translates to: LEVPLCCCMQPRRQTAPPDLQIC*PLNRIT
Trigger: AGTGATCCTGTTCAAAGGCAAGCATATTTGCAGGTC...AGGAGGTGCGGTCTGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp AAAGTCCCATCCTCAGGCCTGCTCAGGTTTGGGGCTGCCATGTGTGCAACAGAGGTGCTGCCTCGATCTTaGTGTCTCAACATGCAGATA +
Preference number: 5 (lower is better)
Translates to: KVPSSGLLRFGAAMCATEVLPRS*CLNMQI
Trigger: TATCTGCATGTTGAGACACAAAGATCGAGGCAGCAC...CTCTGTTGCACACATGGCAGCCCCAAACCTGAGCAGGCCTGAGGATGGGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
CDS-3UTR CAA 90 bp ATCCTACTTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGATGAGGTCTTGCAACTaGTTCACCTGCACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: ILLRNSPKLQPFIQHEARMRSCN*FTCTVL
Trigger: GAGCACTGTGCAGGTGAACAAGTTGCAAGACCTCAT...CCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAAGTAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp ACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGCAGTGAAGATTCCGTGCTGCCTCGATCTTaGTGTCTCAACATGCAGATA +
Preference number: 5 (lower is better)
Translates to: TPPNSNPSFSTRPGSEDSVLPRS*CLNMQI
Trigger: TATCTGCATGTTGAGACACAAAGATCGAGGCAGCAC...GGAATCTTCACTGCCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113146.9
CDS-3UTR CAA 90 bp AACACAATTCTGAGAGTTGACAGTAATCTGAACACCAGGGTCAGTGGAAGGCAGCGCTGCCTAGGCTGGTaGTGCTGCCTCGATCTTTGT +
Preference number: 5 (lower is better)
Translates to: NTILRVDSNLNTRVSGRQRCLGW*CCLDLC
Trigger: ACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCG...CTGCCTTCCACTGACCCTGGTGTTCAGATTACTGTCAACTCTCAGAATTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000134945.8
ENSMUST00000151149.2
CDS-3UTR CAA 90 bp ATCCTACTTCGTAACTCCCCCAAACTCCAACCCTTCATTCAGCACGAGGCCAGGGACCTGCAAATATGCTaGCCTTTGAACAGGATCACT +
Preference number: 5 (lower is better)
Translates to: ILLRNSPKLQPFIQHEARDLQIC*PLNRIT
Trigger: AGTGATCCTGTTCAAAGGCAAGCATATTTGCAGGTC...CCTGGCCTCGTGCTGAATGAAGGGTTGGAGTTTGGGGGAGTTACGAAGTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp CTGGGGGTTGCTGCTCGAAGTCCCACTGTGCTGCTGTATGCAGCCAAGAAGGCACGATCTTTATATTCCTaGAAGAATTCACAACCTGGA +
Preference number: 5 (lower is better)
Translates to: LGVAARSPTVLLYAAKKARSLYS*KNSQPG
Trigger: TCCAGGTTGTGAATTCTTCAAGGAATATAAAGATCG...TGCCTTCTTGGCTGCATACAGCAGCACAGTGGGACTTCGAGCAGCAACCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp AACACAATTCTGAGAGTTGACAGTAATCTGAACACCAGGGTCAGTGGAAGGCAGTGCCAAAGTCTGGGTTaGGGGACCTCAAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: NTILRVDSNLNTRVSGRQCQSLG*GTSRGL
Trigger: CAGTCCTCTTGAGGTCCCCAAACCCAGACTTTGGCA...CTGCCTTCCACTGACCCTGGTGTTCAGATTACTGTCAACTCTCAGAATTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151149.2
CDS TCA 90 bp GGGGGTAGTGGCCGCAGATATCACCATTCACATTTGGAATCACGCTaGAACAGTAGTCACGGCCAAATAGCTCCAGACATCTCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GGSGRRYHHSHLESR*NSSHGQIAPDISSQ
Trigger: TTGAGAAGAGATGTCTGGAGCTATTTGGCCGTGACTACTGTTTCAGCGTGATTCCAAATGTGAATGGTGATATCTGCGGCCACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000142938.8
ENSMUST00000156141.3
CDS-3UTR CAA 90 bp GAAAAGCAGCAGTTTCAGGTAGTTCTGTGTTTGTTGCACCAGGTCCCAACTCTGATGAGGTCTTGCAACTaGTTCACCTGCACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: EKQQFQVVLCLLHQVPTLMRSCN*FTCTVL
Trigger: GAGCACTGTGCAGGTGAACAAGTTGCAAGACCTCAT...CAGAGTTGGGACCTGGTGCAACAAACACAGAACTACCTGAAACTGCTGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142938.8
CDS-3UTR CAA 90 bp TCCCGATCTTTATATTCCTTGAAGAATTCACAACCTGGATATGGAATAGAGAGGGAGGCACATCCACTCTaGGTCCTGAGGGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: SRSLYSLKNSQPGYGIEREAHPL*VLRVGQ
Trigger: CTGTCCCACCCTCAGGACCAAGAGTGGATGTGCCTC...CCTCTCTATTCCATATCCAGGTTGTGAATTCTTCAAGGAATATAAAGATCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203385.2
CDS-3UTR CAA 90 bp GTGGTAGAGCATTTATTTGCTTATAAACACAAGCCCGGGTTTCTTTCCCCAGCACGATCTTTATATTCCTaGAAGAATTCACAACCTGGA +
Preference number: 5 (lower is better)
Translates to: VVEHLFAYKHKPGFLSPARSLYS*KNSQPG
Trigger: TCCAGGTTGTGAATTCTTCAAGGAATATAAAGATCG...TGCTGGGGAAAGAAACCCGGGCTTGTGTTTATAAGCAAATAAATGCTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
CDS-3UTR CAA 90 bp GTAATCCCGATCTTTATATTCCTTGAAGAATTCACAACCTGGATATGGAATAGAAAAGGCCACTCCTTCTaGTTCTCCACCATCAGGTCA +
Preference number: 5 (lower is better)
Translates to: VIPIFIFLEEFTTWIWNRKGHSF*FSTIRS
Trigger: TGACCTGATGGTGGAGAACAAGAAGGAGTGGCCTTT...TCTATTCCATATCCAGGTTGTGAATTCTTCAAGGAATATAAAGATCGGGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203385.2
CDS TCA 72 bp GAGCCGCTCTTCCCGCCGCTGTCCTTGGCACGGTACTaGGTCCGGGAGAACTCCTCCAGCAGCTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: EPLFPPLSLARY*VRENSSSSSQS
Trigger: GCTCTGGGAGCTGCTGGAGGAGTTCTCCCGGACTCAGTACCGTGCCAAGGACAGCGGCGGGAAGAGCGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000142938.8
CDS GCA 72 bp AGACCAGGGAGAAGTCGCTGCCTAGGCTGGTTGTGCTaGCTCGATCTTTGTGTCCTCTGGGTCTTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RPGRSRCLGWLC*LDLCVLWVFRQ
Trigger: CTGCCTGAAGACCCAGAGGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS GCA 72 bp CCAAGACCAGGGAGAAGTCGCTGCCTAGGCTGGTTGTaGTGCCTCGATCTTTGTGTCCTCTGGGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PRPGRSRCLGWL*CLDLCVLWVFR
Trigger: CCTGAAGACCCAGAGGACACAAAGATCGAGGCAGCACAACCAGCCTAGGCAGCGACTTCTCCCTGGTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148523.8
CDS TCA 72 bp ACCGACCTCTGCACCTGGCCATCTTGCTTCGGTGAATaGGGTCTTGCAACTTGTTCACCTGCACAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: TDLCTWPSCFGE*GLATCSPAQCS
Trigger: AGAGCACTGTGCAGGTGAACAAGTTGCAAGACCTCATTCACCGAAGCAAGATGGCCAGGTGCAGAGGTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000142938.8
ENSMUST00000156141.3
CDS TCA 72 bp AGGATAACCTGCCATATCATCAGCTCCATGGAAGCATaGGGCACATCCACTCTTGGTCCTGAGGGTGGGACA +
Preference number: 6 (lower is better)
Translates to: RITCHIISSMEA*GTSTLGPEGGT
Trigger: TGTCCCACCCTCAGGACCAAGAGTGGATGTGCCTCATGCTTCCATGGAGCTGATGATATGGCAGGTTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203385.2
CDS CAA 90 bp AAACCGACCTCTGCACCTGGCCATCTTGCTTCGGTGAATGAGGTCTaGCAACTTGTTCACCTGCACAGTGCTCTGAAATGTGTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: KPTSAPGHLASVNEV*QLVHLHSALKCVFL
Trigger: GAGAAAGACACATTTCAGAGCACTGTGCAGGTGAACAAGTTGCAAGACCTCATTCACCGAAGCAAGATGGCCAGGTGCAGAGGTCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000142938.8
ENSMUST00000156141.3
CDS CAA 72 bp TCTGCACCTGGCCATCTTGCTTCGGTGAATGAGGTCTaGCAACTTGTTCACCTGCACAGTGCTCTGAAATGT +
Preference number: 6 (lower is better)
Translates to: SAPGHLASVNEV*QLVHLHSALKC
Trigger: ACATTTCAGAGCACTGTGCAGGTGAACAAGTTGCAAGACCTCATTCACCGAAGCAAGATGGCCAGGTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000142938.8
ENSMUST00000156141.3
CDS TCA 72 bp GGCCGCAGATATCACCATTCACATTTGGAATCACGCTaGAACAGTAGTCACGGCCAAATAGCTCCAGACATC +
Preference number: 6 (lower is better)
Translates to: GRRYHHSHLESR*NSSHGQIAPDI
Trigger: GATGTCTGGAGCTATTTGGCCGTGACTACTGTTTCAGCGTGATTCCAAATGTGAATGGTGATATCTGCGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113146.9
ENSMUST00000129883.8
ENSMUST00000142938.8
ENSMUST00000156141.3
CDS GCA 72 bp AGTCACGGCCAAATAGCTCCAGACATCTCTTCTCAATaGGTTCAACCGCCTGTAACACATCAAGAACTTTGC +
Preference number: 6 (lower is better)
Translates to: SHGQIAPDISSQ*VQPPVTHQELC
Trigger: GCAAAGTTCTTGATGTGTTACAGGCGGTTGAACGCATTGAGAAGAGATGTCTGGAGCTATTTGGCCGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156141.3
CDS CAA 72 bp CATGATGAAAAGCAGCAGTTTCAGGTAGTTCTGTGTTaGTTGCACCAGGTCCCAACTCTGCTTCCAGTTAAA +
Preference number: 6 (lower is better)
Translates to: HDEKQQFQVVLC*LHQVPTLLPVK
Trigger: TTTAACTGGAAGCAGAGTTGGGACCTGGTGCAACAAACACAGAACTACCTGAAACTGCTGCTTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137772.8
CDS GCA 72 bp ATATTCCTTGAAGAATTCACAACCTTATCAAAAAGGTaGGTGTCACCACTCCGAAGAACAAAGTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: IFLEEFTTLSKR*VSPLRRTKSSS
Trigger: AGAAGAGGACTTTGTTCTTCGGAGTGGTGACACGCACCTTTTTGATAAGGTTGTGAATTCTTCAAGGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000144976.4