Pregenerated sensors for MTMR11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045934Ensembl transcript IDs: ENSMUST00000054356.16, ENSMUST00000129925.8
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAGGGGAGCCCCCATTCCTGGTCAGCTAGGCTTTCGGAGGATCTaGCAGGTCGAGGGAGCCAATGAGAAGAGACTGCCAGCAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: VRGAPIPGQLGFRRI*QVEGANEKRLPARR Trigger: CCTCCTTGCTGGCAGTCTCTTCTCATTGGCTCCCTCGACCTGCCAGATCCTCCGAAAGCCTAGCTGACCAGGAATGGGGGCTCCCCTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 90 bp | TCTGGACCTCAGGCCTGCCCCTCAGGTAACAGCGTTTCCAGAACCTaGTCTGTGGTCCCAGATATCCAGGCAGCAGTAGCCCGGGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: SGPQACPSGNSVSRT*SVVPDIQAAVAREV Trigger: TACCTCCCGGGCTACTGCTGCCTGGATATCTGGGACCACAGATCAGGTTCTGGAAACGCTGTTACCTGAGGGGCAGGCCTGAGGTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 90 bp | TGGTCAGCTAGGCTTTCGGAGGATCTGGCAGGTCGAGGGAGCCAATaGGAAGAGACTGCCAGCAAGGAGGAGCTGTCTTGCCAAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: WSARLSEDLAGRGSQ*EETASKEELSCQGQ Trigger: CTGTCCTTGGCAAGACAGCTCCTCCTTGCTGGCAGTCTCTTCTCATTGGCTCCCTCGACCTGCCAGATCCTCCGAAAGCCTAGCTGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 90 bp | TGCCAGCAAGGAGGAGCTGTCTTGCCAAGGACAGAGCTGATTCAGTaGGGTCAGGGTCCCTCTAGAGAACAGCCACATAGAACTAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: CQQGGAVLPRTELIQ*GQGPSREQPHRTRG Trigger: CCCCCTAGTTCTATGTGGCTGTTCTCTAGAGGGACCCTGACCCCACTGAATCAGCTCTGTCCTTGGCAAGACAGCTCCTCCTTGCTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 90 bp | ACCAAACAATGTCCGGGCTTCCGGAGCCAAAAGCAGCTGGACGAGTaGGGAGAGGAGGCCATTGAAATCACGATCCCCAAGCTCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: TKQCPGFRSQKQLDE*GEEAIEITIPKLLE Trigger: CTCCAAGAGCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCTCACTCGTCCAGCTGCTTTTGGCTCCGGAAGCCCGGACATTGTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR GCA 90 bp | GAGAACAGCCACATAGAACTAGGGGGTCCAGGAACCATGAGGCTTTaGTGCTGTCTAGAGAACCTGCTGTCTGGGCAATGCTCCGGATCG | + |
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Preference number: 1 (lower is better) Translates to: ENSHIELGGPGTMRL*CCLENLLSGQCSGS Trigger: CGATCCGGAGCATTGCCCAGACAGCAGGTTCTCTAGACAGCAGCAAAGCCTCATGGTTCCTGGACCCCCTAGTTCTATGTGGCTGTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 90 bp | GACTGGAAACCAAACAATGTCCGGGCTTCCGGAGCCAAAAGCAGCTaGACGAGTGAGGAGAGGAGGCCATTGAAATCACGATCCCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: DWKPNNVRASGAKSS*TSEERRPLKSRSPS Trigger: GCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCTCACTCGTCCAGCTGCTTTTGGCTCCGGAAGCCCGGACATTGTTTGGTTTCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 90 bp | GAAGAGACTGCCAGCAAGGAGGAGCTGTCTTGCCAAGGACAGAGCTaGTTCAGTGGGGTCAGGGTCCCTCTAGAGAACAGCCACATAGAA | + |
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Preference number: 1 (lower is better) Translates to: EETASKEELSCQGQS*FSGVRVPLENSHIE Trigger: TTCTATGTGGCTGTTCTCTAGAGGGACCCTGACCCCACTGAATCAGCTCTGTCCTTGGCAAGACAGCTCCTCCTTGCTGGCAGTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 90 bp | GATGAGTCAGGCAGGCAAAGGGCCCTCAGTTTCAAGTGGGCAAGTTaGATATCGGCAAGACTAGGCATCTCATCCATGGTCTCTACCAAG | + |
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Preference number: 1 (lower is better) Translates to: DESGRQRALSFKWAS*ISARLGISSMVSTK Trigger: CTTGGTAGAGACCATGGATGAGATGCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAAACTGAGGGCCCTTTGCCTGCCTGACTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 90 bp | TCAGCTACAGATGAGTCAGGCAGGCAAAGGGCCCTCAGTTTCAAGTaGGCAAGTTGGATATCGGCAAGACTAGGCATCTCATCCATGGTC | + |
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Preference number: 1 (lower is better) Translates to: SATDESGRQRALSFK*ASWISARLGISSMV Trigger: GACCATGGATGAGATGCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAAACTGAGGGCCCTTTGCCTGCCTGACTCATCTGTAGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 90 bp | TGCCCTGCCTCTGAGAACGACGCTAACAAACAGTTTCAGCAGATCTaGGAGAGGATGGTATTCGGATCTCTTTTCTTGCTCTGGTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: CPASENDANKQFQQI*ERMVFGSLFLLWSS Trigger: CGAGGACCAGAGCAAGAAAAGAGATCCGAATACCATCCTCTCTCAGATCTGCTGAAACTGTTTGTTAGCGTCGTTCTCAGAGGCAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 90 bp | CTGAGAACGACGCTAACAAACAGTTTCAGCAGATCTGAGAGAGGATaGTATTCGGATCTCTTTTCTTGCTCTGGTCCTCGGGAGATATTC | + |
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Preference number: 1 (lower is better) Translates to: LRTTLTNSFSRSERG*YSDLFSCSGPREIF Trigger: GAATATCTCCCGAGGACCAGAGCAAGAAAAGAGATCCGAATACCATCCTCTCTCAGATCTGCTGAAACTGTTTGTTAGCGTCGTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR GCA 90 bp | AGTTTCAGCAGATCTGAGAGAGGATGGTATTCGGATCTCTTTTCTTaGTCTGGTCCTCGGGAGATATTCTTGGTGTCCATTGTCTTAACA | + |
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Preference number: 1 (lower is better) Translates to: SFSRSERGWYSDLFS*SGPREIFLVSIVLT Trigger: TGTTAAGACAATGGACACCAAGAATATCTCCCGAGGACCAGAGCAAGAAAAGAGATCCGAATACCATCCTCTCTCAGATCTGCTGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGAGAACAGCCACATAGAACTAGGGGGTCCAGGAACCATGAGGCTTTGCTGCGAAGGGGTGTCCAGCTaGCACCCACTCTCGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LENSHIELGGPGTMRLCCEGVSS*HPLSLH Trigger: GTGCAGCGAGAGTGGGTGGCAGCTGGACACCCCTTC...GCAGCAAAGCCTCATGGTTCCTGGACCCCCTAGTTCTATGTGGCTGTTCTCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGATTCAGTGGGGTCAGGGTCCCTCTAGAGAACAGCCACATAGAACTAGGCAGTGTCCCCGAGCCTaGTCAGGAAGGGGTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ELIQWGQGPSREQPHRTRQCPRA*SGRGVQ Trigger: CTGGACACCCCTTCCTGACCAGGCTCGGGGACACTG...CCTAGTTCTATGTGGCTGTTCTCTAGAGGGACCCTGACCCCACTGAATCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CAA 90 bp | GCTTCCGGAGCCAAAAGCAGCTGGACGAGTGAGGAGAGGAGGCCATaGAAATCACGATCCCCAAGCTCTTGGAGCACTACAGAACGGACC | + |
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Preference number: 2 (lower is better) Translates to: ASGAKSSWTSEERRP*KSRSPSSWSTTERT Trigger: GGTCCGTTCTGTAGTGCTCCAAGAGCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCTCACTCGTCCAGCTGCTTTTGGCTCCGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CAA 90 bp | TCGAGGGAGCCAATGAGAAGAGACTGCCAGCAAGGAGGAGCTGTCTaGCCAAGGACAGAGCTGATTCAGTGGGGTCAGGGTCCCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SREPMRRDCQQGGAV*PRTELIQWGQGPSR Trigger: TCTAGAGGGACCCTGACCCCACTGAATCAGCTCTGTCCTTGGCAAGACAGCTCCTCCTTGCTGGCAGTCTCTTCTCATTGGCTCCCTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGAGAACAGCCACATAGAACTAGGGGGTCCAGGAACCATGAGGCTTTGCTGCGGTCAGACAGGAAGATaGGCAGAGACCCCTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LENSHIELGGPGTMRLCCGQTGR*AETPAL Trigger: CAGGGCAGGGGTCTCTGCTCATCTTCCTGTCTGACC...GCAGCAAAGCCTCATGGTTCCTGGACCCCCTAGTTCTATGTGGCTGTTCTCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTAGGGGGTCCAGGAACCATGAGGCTTTGCTGCTGTCTAGAGAACCTGCTGAATTCCGCTGGAAACTaGTGGAGGAGCTGCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ELGGPGTMRLCCCLENLLNSAGN*WRSCQA Trigger: TGCCTGGCAGCTCCTCCAGCAGTTTCCAGCGGAATT...CAGCAGGTTCTCTAGACAGCAGCAAAGCCTCATGGTTCCTGGACCCCCTAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATGTCCGGGCTTCCGGAGCCAAAAGCAGCTGGACGAGTGAGGAGAGGAGGATACTGAGATGTCGCTaGCCTTTCGAAGACAAGACC | + |
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Preference number: 2 (lower is better) Translates to: NNVRASGAKSSWTSEERRILRCR*PFEDKT Trigger: GGTCTTGTCTTCGAAAGGCCAGCGACATCTCAGTAT...CCTCCTCTCCTCACTCGTCCAGCTGCTTTTGGCTCCGGAAGCCCGGACATTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR TCA 90 bp | TCACGATCCCCAAGCTCTTGGAGCACTACAGAACGGACCCGAGATGTCACTAATATCTTCAGCTACAGATaGGTCAGGCAGGCAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRSPSSWSTTERTRDVTNIFSYR*VRQAKG Trigger: GCCCTTTGCCTGCCTGACTCATCTGTAGCTGAAGAT...ATTAGTGACATCTCGGGTCCGTTCTGTAGTGCTCCAAGAGCTTGGGGATCGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR TCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTGGTCAGACAGGAAGATaGGCAGAGACCCCTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPGQTGR*AETPAL Trigger: CAGGGCAGGGGTCTCTGCTCATCTTCCTGTCTGACC...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGACTGCCAGCAAGGAGGAGCTGTCTTGCCAAGGACAGAGCTGATTCAGTGAGGTACAGAATTGCCTaGGAAAAGGGGCAATCACAT | + |
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Preference number: 2 (lower is better) Translates to: KRLPARRSCLAKDRADSVRYRIA*EKGQSH Trigger: ATGTGATTGCCCCTTTTCCCAGGCAATTCTGTACCT...CACTGAATCAGCTCTGTCCTTGGCAAGACAGCTCCTCCTTGCTGGCAGTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | AAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCGCCACCCACTCTCGCTaGACTAGTGACTGGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: KRCYENIQWEETVSPLFTATHSR*TSDWKP Trigger: TGGTTTCCAGTCACTAGTGCAGCGAGAGTGGGTGGC...GGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | CGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAATGAGCAGAGACCCCTaGCCTGCCTCTGAGAACGAC | + |
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Preference number: 2 (lower is better) Translates to: RFLPYSPRSHRRLRKDFKMSRDP*PASEND Trigger: GTCGTTCTCAGAGGCAGGGCAGGGGTCTCTGCTCAT...TTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR-3UTR CCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTGCCCTCAGTTTCAAGTaGGCAAGTTGGATATCGGCA | + |
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Preference number: 2 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPALSFK*ASWISA Trigger: TGCCGATATCCAACTTGCCCACTTGAAACTGAGGGC...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTCTTCTAAGTGAACTCTaGAGACTGGAATGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: AAMKIYSGRRRFLPYSPRLLSEL*RLECQS Trigger: GCTTTGGCATTCCAGTCTGCAGAGTTCACTTAGAAG...ACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCTAACAAACAGTTTCAGCAGATCTGAGAGAGGATGGTATTCGGATCTCTTTGGAACCATGAGGCTTTaGTGCTGTCTAGAGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: TLTNSFSRSERGWYSDLFGTMRL*CCLENL Trigger: CAGGTTCTCTAGACAGCAGCAAAGCCTCATGGTTCC...AAAGAGATCCGAATACCATCCTCTCTCAGATCTGCTGAAACTGTTTGTTAGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR CCA 90 bp | AAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTTCAAGTGGGCAAGTTaGATATCGGCAAGACTAGGC | + |
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Preference number: 2 (lower is better) Translates to: KRCYENIQWEETVSPLFTFKWAS*ISARLG Trigger: GCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAA...GGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | TTAATGAACTCCTTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGAATGAGCAGAGACCCCTaGCCTGCCTCTGAGAACGAC | + |
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Preference number: 2 (lower is better) Translates to: LMNSLNRNAAMKIYSGRRMSRDP*PASEND Trigger: GTCGTTCTCAGAGGCAGGGCAGGGGTCTCTGCTCAT...TCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAAGGAGTTCATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATCAGTTTCAGCAGATCTaGGAGAGGATGGTATTCGGA | + |
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Preference number: 2 (lower is better) Translates to: NRNAAMKIYSGRRRFLPYQFQQI*ERMVFG Trigger: TCCGAATACCATCCTCTCTCAGATCTGCTGAAACTG...ATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAAGGTACAGAATTGCCTaGGAAAAGGGGCAATCACAT | + |
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Preference number: 2 (lower is better) Translates to: RFLPYSPRSHRRLRKDFKRYRIA*EKGQSH Trigger: ATGTGATTGCCCCTTTTCCCAGGCAATTCTGTACCT...TTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGCTTCTAAGTGAACTCTaGAGACTGGAATGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LFTSFPQKTKKRFQSSVELLSEL*RLECQS Trigger: GCTTTGGCATTCCAGTCTGCAGAGTTCACTTAGAAG...CTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGTATGAAAATATACAGTaGGAGGAGACGGTTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPQKTKKRFQSSVERLRMYENIQ*EETVSP Trigger: GGGAGAAACCGTCTCCTCCCACTGTATATTTTCATA...CATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR CCA 72 bp | GCCCCCATTCCTGGTCAGCTAGGCTTTCGGAGGATCTaGCAGGTCGAGGGAGCCAATGAGAAGAGACTGCCA | + |
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Preference number: 3 (lower is better) Translates to: APIPGQLGFRRI*QVEGANEKRLP Trigger: TGGCAGTCTCTTCTCATTGGCTCCCTCGACCTGCCAGATCCTCCGAAAGCCTAGCTGACCAGGAATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 72 bp | AGGCTTTCGGAGGATCTGGCAGGTCGAGGGAGCCAATaGGAAGAGACTGCCAGCAAGGAGGAGCTGTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: RLSEDLAGRGSQ*EETASKEELSC Trigger: GCAAGACAGCTCCTCCTTGCTGGCAGTCTCTTCTCATTGGCTCCCTCGACCTGCCAGATCCTCCGAAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 72 bp | CAGGCCTGCCCCTCAGGTAACAGCGTTTCCAGAACCTaGTCTGTGGTCCCAGATATCCAGGCAGCAGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: QACPSGNSVSRT*SVVPDIQAAVA Trigger: GGCTACTGCTGCCTGGATATCTGGGACCACAGATCAGGTTCTGGAAACGCTGTTACCTGAGGGGCAGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 72 bp | GGGAGTACTCAGGGGTGTAAACTTGTGTGTACGAGTTaGACTGTCCACTCTTCTTCCCGCGCTCCCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GSTQGCKLVCTS*TVHSSSRAPRE Trigger: CTCCCTGGGAGCGCGGGAAGAAGAGTGGACAGTTCAACTCGTACACACAAGTTTACACCCCTGAGTACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 72 bp | CCAAACAATGTCCGGGCTTCCGGAGCCAAAAGCAGCTaGACGAGTGAGGAGAGGAGGCCATTGAAATCACGA | + |
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Preference number: 3 (lower is better) Translates to: PNNVRASGAKSS*TSEERRPLKSR Trigger: TCGTGATTTCAATGGCCTCCTCTCCTCACTCGTCCAGCTGCTTTTGGCTCCGGAAGCCCGGACATTGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 72 bp | GGAGGAGCTGTCTTGCCAAGGACAGAGCTGATTCAGTaGGGTCAGGGTCCCTCTAGAGAACAGCCACATAGA | + |
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Preference number: 3 (lower is better) Translates to: GGAVLPRTELIQ*GQGPSREQPHR Trigger: TCTATGTGGCTGTTCTCTAGAGGGACCCTGACCCCACTGAATCAGCTCTGTCCTTGGCAAGACAGCTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 72 bp | CCAAAAGCAGCTGGACGAGTGAGGAGAGGAGGCCATTaGAATCACGATCCCCAAGCTCTTGGAGCACTACAG | + |
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Preference number: 3 (lower is better) Translates to: PKAAGRVRRGGH*NHDPQALGALQ Trigger: CTGTAGTGCTCCAAGAGCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCTCACTCGTCCAGCTGCTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 72 bp | GGCAGGCAAAGGGCCCTCAGTTTCAAGTGGGCAAGTTaGATATCGGCAAGACTAGGCATCTCATCCATGGTC | + |
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Preference number: 3 (lower is better) Translates to: GRQRALSFKWAS*ISARLGISSMV Trigger: GACCATGGATGAGATGCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAAACTGAGGGCCCTTTGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 72 bp | GATGAGTCAGGCAGGCAAAGGGCCCTCAGTTTCAAGTaGGCAAGTTGGATATCGGCAAGACTAGGCATCTCA | + |
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Preference number: 3 (lower is better) Translates to: DESGRQRALSFK*ASWISARLGIS Trigger: TGAGATGCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAAACTGAGGGCCCTTTGCCTGCCTGACTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR-3UTR CAA 90 bp | GAACTAGGGGGTCCAGGAACCATGAGGCTTTGCTGCTGTCTAGAGAACCTGCTGTCTAGGACATCATTGTaGGGACTGATGAAAAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ELGGPGTMRLCCCLENLLSRTSL*GLMKRV Trigger: GACCCTTTTCATCAGTCCCAACAATGATGTCCTAGA...CAGCAGGTTCTCTAGACAGCAGCAAAGCCTCATGGTTCCTGGACCCCCTAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR TCA 72 bp | CTTCTAAGTGAACTCTGCAGACTGGAATGCCAAAGCTaGGGCGTCAAGGTCAGACAGGAAGATGAGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LLSELCRLECQS*GVKVRQEDEQR Trigger: TCTCTGCTCATCTTCCTGTCTGACCTTGACGCCTCAGCTTTGGCATTCCAGTCTGCAGAGTTCACTTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| 3UTR CCA 72 bp | AAAAACTCAGAGAATTCAAATTCCGCTGGAAACTGCTaGAGGAGCTGCCAGGCACAGTCAAGGAAGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KNSENSNSAGNC*RSCQAQSRKRG Trigger: TCCTCTCTTCCTTGACTGTGCCTGGCAGCTCCTCCAGCAGTTTCCAGCGGAATTTGAATTCTCTGAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| 3UTR CCA 72 bp | ACGCTAACAAACAGTTTCAGCAGATCTGAGAGAGGATaGTATTCGGATCTCTTTTCTTGCTCTGGTCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: TLTNSFSRSERG*YSDLFSCSGPR Trigger: CCGAGGACCAGAGCAAGAAAAGAGATCCGAATACCATCCTCTCTCAGATCTGCTGAAACTGTTTGTTAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATCTCATGTCACAGTTTaGACGGCCATCCAAAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: EETVSPLFTSFPQKTKKRSHVTV*TAIQKV Trigger: TACCTTTTGGATGGCCGTCAAAACTGTGACATGAGA...TCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGAGGTCTGAGGAGAGGAGGCCATaGAAATCACGATCCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QKTKKRFQSSVERLRMRSEERRP*KSRSPS Trigger: GCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCTC...AGACCTCATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| 3UTR GCA 72 bp | AGATCTGAGAGAGGATGGTATTCGGATCTCTTTTCTTaGTCTGGTCCTCGGGAGATATTCTTGGTGTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: RSERGWYSDLFS*SGPREIFLVSI Trigger: AATGGACACCAAGAATATCTCCCGAGGACCAGAGCAAGAAAAGAGATCCGAATACCATCCTCTCTCAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCGTCTCTAGGACATCATaGTTGGGACTGATGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRCYENIQWEETVSPLFTVSRTS*LGLMKR Trigger: CCTTTTCATCAGTCCCAACAATGATGTCCTAGAGAC...GGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGAGGTCTTCTCATGTCACAGTTTaGACGGCCATCCAAAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QKTKKRFQSSVERLRMRSSHVTV*TAIQKV Trigger: TACCTTTTGGATGGCCGTCAAAACTGTGACATGAGA...AGACCTCATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGTCTAGGACATCATTGTaGGGACTGATGAAAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FPQKTKKRFQSSVERLRMSRTSL*GLMKRV Trigger: GACCCTTTTCATCAGTCCCAACAATGATGTCCTAGA...CATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACGGACCCGAGATGTCACTAATACTGAGATGTCGCTGGCCTTTCGAAGACCAGAGGCCAGGCAGCTaGCAAGCTGATGACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNGPEMSLILRCRWPFEDQRPGS*QADDCW Trigger: CCAGCAGTCATCAGCTTGGCAGCTGCCTGGCCTCTG...GTCTTCGAAAGGCCAGCGACATCTCAGTATTAGTGACATCTCGGGTCCGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGACTGCCAGCAAGGAGGAGCTGTCTTGCCAAGGACAGAGCTGATTCAGTGCAAGCTGATGACTGCTaGGCTCCGGCATCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRLPARRSCLAKDRADSVQADDC*APASCS Trigger: GGAACAGGATGCCGGAGCCCAGCAGTCATCAGCTTG...CACTGAATCAGCTCTGTCCTTGGCAAGACAGCTCCTCCTTGCTGGCAGTCTCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| 3UTR CAA 72 bp | GCCAAAAGCAGCTGGACGAGTGAGGAGAGGAGGCCATaGAAATCACGATCCCCAAGCTCTTGGAGCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: AKSSWTSEERRP*KSRSPSSWSTT Trigger: TGTAGTGCTCCAAGAGCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCTCACTCGTCCAGCTGCTTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | TGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTTCGTTACCTGGAAGGCCTaGGGTGCCAGCCCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CYENIQWEETVSPLFTSFVTWKA*GASPPA Trigger: GGCTGGAGGGCTGGCACCTCAGGCCTTCCAGGTAAC...GAACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGCCATTGAAATCACGATCCCCAAGCTCTTGGAGCACTACAGAACGGACGAGCTCTGGCTTGAATaGTGGCCATGGTTACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEAIEITIPKLLEHYRTDELWLE*WPWLPG Trigger: TCCAGGTAACCATGGCCATCATTCAAGCCAGAGCTC...GTCCGTTCTGTAGTGCTCCAAGAGCTTGGGGATCGTGATTTCAATGGCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| 3UTR CAA 72 bp | AGGCAGGCAAAGGGCCCTCAGTTTCAAGTGGGCAAGTaGGATATCGGCAAGACTAGGCATCTCATCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQAKGPQFQVGK*DIGKTRHLIHG Trigger: ACCATGGATGAGATGCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAAACTGAGGGCCCTTTGCCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGTGGGCAAGTTGGATATCGGCAAGACTAGGCATCTCATCCATGGTCTCCTCGGTCCACGGCCCTaGTGGAAATGTGCAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQVGKLDIGKTRHLIHGLLGPRP*WKCANA Trigger: AGCATTTGCACATTTCCATCAGGGCCGTGGACCGAG...GAGACCATGGATGAGATGCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGGACTGATGAAAAGGGTCTCTCATGTCACAGTTTTGACGGCCATCCAAAACCAGGACGGAGAAGCTaGACTCTTGACAAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTDEKGLSCHSFDGHPKPGRRS*TLDKPL Trigger: GAGCGGCTTGTCAAGAGTGCAGCTTCTCCGTCCTGG...TTTTGGATGGCCGTCAAAACTGTGACATGAGAGACCCTTTTCATCAGTCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | GAACTAGGGGGTCCAGGAACCATGAGGCTTTGCTGCTGTCTAGAGAACCTGCTGGCCCTGATGGAAATGTaGAAATGCTCTTCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELGGPGTMRLCCCLENLLALMEM*KCSSDF Trigger: GAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGC...CAGCAGGTTCTCTAGACAGCAGCAAAGCCTCATGGTTCCTGGACCCCCTAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTTCTGGACCTCAGGCCTaGCCCTCAGGTAACAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAMKIYSGRRRFLPYSPRSGPQA*PSGNSV Trigger: AACGCTGTTACCTGAGGGGCAGGCCTGAGGTCCAGA...ACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | GAGGAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGACAAGCTGATGACTGCTaGGCTCCGGCATCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EETVSPLFTSFPQKTKKRQADDC*APASCS Trigger: GGAACAGGATGCCGGAGCCCAGCAGTCATCAGCTTG...TCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CCA 90 bp | AAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCCGCTGGAAACTGCTaGAGGAGCTGCCAGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KRCYENIQWEETVSPLFTSAGNC*RSCQAQ Trigger: CTGTGCCTGGCAGCTCCTCCAGCAGTTTCCAGCGGA...GGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR TCA 90 bp | CAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGAGGTCTGTTACCTGGAAGGCCTaGGGTGCCAGCCCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKTKKRFQSSVERLRMRSVTWKA*GASPPA Trigger: GGCTGGAGGGCTGGCACCTCAGGCCTTCCAGGTAAC...AGACCTCATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGCGGTCCACGGCCCTaGTGGAAATGTGCAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPRGPRP*WKCANA Trigger: AGCATTTGCACATTTCCATCAGGGCCGTGGACCGCG...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR TCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTTGCCAAGGACAGAGCTaGTTCAGTGGGGTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPCQGQS*FSGVRV Trigger: GACCCTGACCCCACTGAATCAGCTCTGTCCTTGGCA...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | AATGAGGTCTCTAGGACATCATTGTTGGGACTGATGAAAAGGGTCTCTCATGTCCCAGGACGGAGAAGCTaGACTCTTGACAAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NEVSRTSLLGLMKRVSHVPGRRS*TLDKPL Trigger: GAGCGGCTTGTCAAGAGTGCAGCTTCTCCGTCCTGG...GACATGAGAGACCCTTTTCATCAGTCCCAACAATGATGTCCTAGAGACCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGAGCCACCCACTCTCGCTaGACTAGTGACTGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: EETVSPLFTSFPQKTKKRATHSR*TSDWKP Trigger: TGGTTTCCAGTCACTAGTGCAGCGAGAGTGGGTGGC...TCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | TCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGACAGTGTCCCCGAGCCTaGTCAGGAAGGGGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPQKTKKRFQSSVERLRQCPRA*SGRGVQ Trigger: CTGGACACCCCTTCCTGACCAGGCTCGGGGACACTG...TCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTGGCTTTCGGAGGATCTaGCAGGTCGAGGGAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPGFRRI*QVEGAN Trigger: ATTGGCTCCCTCGACCTGCCAGATCCTCCGAAAGCC...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | GAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTTGCCAAGCTGATGACTaGTGGGCTCCGGCATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETVSPLFTSFPQKTKKRFCQADD*WAPASC Trigger: ACAGGATGCCGGAGCCCAGCAGTCATCAGCTTGGCA...AAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | CGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAACTGGAAGGCCTGAGGTaGCAGCCCTCCAGCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLPYSPRSHRRLRKDFKLEGLR*QPSSLK Trigger: TTTGAGGCTGGAGGGCTGGCACCTCAGGCCTTCCAG...TTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGACTGGAAGGCCTGAGGTaGCAGCCCTCCAGCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPQKTKKRFQSSVERLRLEGLR*QPSSLK Trigger: TTTGAGGCTGGAGGGCTGGCACCTCAGGCCTTCCAG...TCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGGCTGAGGAGCCCATCTaGACCTCAGGCCTGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTSFPQKTKKRFQSSVEAEEPI*TSGLPL Trigger: GAGGGGCAGGCCTGAGGTCCAGATGGGCTCCTCAGC...CTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR TCA 90 bp | GCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTGGGTGTCCGGAACCCTaGTACTATCATGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AAMKIYSGRRRFLPYSPRGCPEP*YYHEEQ Trigger: TTGCTCTTCATGATAGTATCAGGGTTCCGGACACCC...ACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR TCA 90 bp | CGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGGTCGAGGGAGCCAATaGGAAGAGACTGCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFLPYSPRSHRRLRKDFKGRGSQ*EETASK Trigger: CTTGCTGGCAGTCTCTTCTCATTGGCTCCCTCGACC...TTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR TCA 90 bp | GCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTAGCGTTTCCAGAACCTaGTCTGTGGTCCCAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: AAMKIYSGRRRFLPYSPRSVSRT*SVVPDI Trigger: GATATCTGGGACCACAGATCAGGTTCTGGAAACGCT...ACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | AATGAGGTCTCTAGGACATCATTGTTGGGACTGATGAAAAGGGTCTCTCATGTCGTATCCTGCTTTCGCTaGCATCCACAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NEVSRTSLLGLMKRVSHVVSCFR*HPQGWK Trigger: CTTCCAGCCTTGTGGATGGCAGCGAAAGCAGGATAC...GACATGAGAGACCCTTTTCATCAGTCCCAACAATGATGTCCTAGAGACCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTGACTGGAAACCAAACAATGTCCGGGCTTCCGGAGCCAAAAGCAGCTGGAATGGAAATGTGCAAATaGTCTTCTGACTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVTGNQTMSGLPEPKAAGMEMCK*SSDFTV Trigger: GACAGTGAAGTCAGAAGAGCATTTGCACATTTCCAT...TCCAGCTGCTTTTGGCTCCGGAAGCCCGGACATTGTTTGGTTTCCAGTCACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCCAATGAGAAGAGACTaGCAGCAAGGAGGAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPPMRRD*QQGGAV Trigger: GACAGCTCCTCCTTGCTGGCAGTCTCTTCTCATTGG...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | GCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTGCCCTCAGTTTCAAGTaGGCAAGTTGGATATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAMKIYSGRRRFLPYSPRALSFK*ASWISA Trigger: TGCCGATATCCAACTTGCCCACTTGAAACTGAGGGC...ACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR TCA 90 bp | GAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTGAGCTCTGGCTTGAATaGTGGCCATGGTTACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETVSPLFTSFPQKTKKRFELWLE*WPWLPG Trigger: TCCAGGTAACCATGGCCATCATTCAAGCCAGAGCTC...AAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | GAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTAGGAGAGGAGGCCATTaGAATCACGATCCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETVSPLFTSFPQKTKKRFRRGGH*NHDPQA Trigger: AGCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCT...AAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | CAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGAGGTCTTGCCAAGCTGATGACTaGTGGGCTCCGGCATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKTKKRFQSSVERLRMRSCQADD*WAPASC Trigger: ACAGGATGCCGGAGCCCAGCAGTCATCAGCTTGGCA...AGACCTCATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGCAGAGGCCAGGCAGCTaGCAAGCTGATGACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTSFPQKTKKRFQSSVEQRPGS*QADDCW Trigger: CCAGCAGTCATCAGCTTGGCAGCTGCCTGGCCTCTG...CTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTCAGCCTCTGGCCCCTTaGTTCTTGCACTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNRNAAMKIYSGRRRFLPQPLAP*FLHSVS Trigger: GGAAACAGAGTGCAAGAAGCAAGGGGCCAGAGGCTG...AGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTAATGAACTCCTTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGAGAAGGGGTGTCCAGCTaGCACCCACTCTCGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LMNSLNRNAAMKIYSGRREGVSS*HPLSLH Trigger: GTGCAGCGAGAGTGGGTGGCAGCTGGACACCCCTTC...TCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAAGGAGTTCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | AAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCACCATGAGGCTTTGCTaGTGTCTAGAGAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRCYENIQWEETVSPLFTTMRLC*CLENLL Trigger: CAGCAGGTTCTCTAGACAGCAGCAAAGCCTCATGGT...GGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTGGAACCATGAGGCTTTaGTGCTGTCTAGAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPGTMRL*CCLENL Trigger: CAGGTTCTCTAGACAGCAGCAAAGCCTCATGGTTCC...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | GCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTATACTGAGATGTCGCTaGCCTTTCGAAGACAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: AAMKIYSGRRRFLPYSPRILRCR*PFEDKT Trigger: GGTCTTGTCTTCGAAAGGCCAGCGACATCTCAGTAT...ACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| 3UTR CAA 72 bp | TTGGGACTGATGAAAAGGGTCTCTCATGTCACAGTTTaGACGGCCATCCAAAAGGTACAGAATTGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLMKRVSHVTV*TAIQKVQNCLG Trigger: TCCCAGGCAATTCTGTACCTTTTGGATGGCCGTCAAAACTGTGACATGAGAGACCCTTTTCATCAGTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | AATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATATCTTCAGCTACAGATaGGTCAGGCAGGCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRNAAMKIYSGRRRFLPYIFSYR*VRQAKG Trigger: GCCCTTTGCCTGCCTGACTCATCTGTAGCTGAAGAT...ATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | TTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTGTATCCTGCTTTCGCTaGCATCCACAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNRNAAMKIYSGRRRFLPVSCFR*HPQGWK Trigger: CTTCCAGCCTTGTGGATGGCAGCGAAAGCAGGATAC...AGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGAGCCCTGATGGAAATGTaGAAATGCTCTTCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EETVSPLFTSFPQKTKKRALMEM*KCSSDF Trigger: GAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGC...TCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGAGGTCTAATTCCGCTGGAAACTaGTGGAGGAGCTGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKTKKRFQSSVERLRMRSNSAGN*WRSCQA Trigger: TGCCTGGCAGCTCCTCCAGCAGTTTCCAGCGGAATT...AGACCTCATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | AATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATACAGAGCTGATTCAGTaGGGTCAGGGTCCCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NRNAAMKIYSGRRRFLPYTELIQ*GQGPSR Trigger: TCTAGAGGGACCCTGACCCCACTGAATCAGCTCTGT...ATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| 3UTR CAA 72 bp | AGAGAGGTTGCGAATGAGGTCTCTAGGACATCATTGTaGGGACTGATGAAAAGGGTCTCTCATGTCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: REVANEVSRTSL*GLMKRVSHVTV Trigger: AACTGTGACATGAGAGACCCTTTTCATCAGTCCCAACAATGATGTCCTAGAGACCTCATTCGCAACCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| 3UTR CAA 72 bp | TGTAGAGAGGTTGCGAATGAGGTCTCTAGGACATCATaGTTGGGACTGATGAAAAGGGTCTCTCATGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CREVANEVSRTS*LGLMKRVSHVT Trigger: TGTGACATGAGAGACCCTTTTCATCAGTCCCAACAATGATGTCCTAGAGACCTCATTCGCAACCTCTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | TTAATGAACTCCTTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGAGAAGGGCAGAGACTGTaGGAGCTGAGGAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LMNSLNRNAAMKIYSGRREGQRL*ELRSPS Trigger: AGATGGGCTCCTCAGCTCTCACAGTCTCTGCCCTTC...TCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAAGGAGTTCATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | CGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAACTGCTGGACTTGACTaGTCTGAGCTCTGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLPYSPRSHRRLRKDFKTAGLD*SELWLE Trigger: TTCAAGCCAGAGCTCAGAGCAGTCAAGTCCAGCAGT...TTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAATCACAAGAAATGAAAATAGCCCCAGAAATCAAACAAATCGGGAGACCTCAGCCTCTGGCCCCTTaGTTCTTGCACTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKSQEMKIAPEIKQIGRPQPLAP*FLHSVS Trigger: GGAAACAGAGTGCAAGAAGCAAGGGGCCAGAGGCTG...AGGTCTCCCGATTTGTTTGATTTCTGGGGCTATTTTCATTTCTTGTGATTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CCA 90 bp | AACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTTGCCATCCACAAGGCTaGAAGGTTACCCTAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NAAMKIYSGRRRFLPYSPCHPQG*KVTLKL Trigger: TAACTTTAGGGTAACCTTCCAGCCTTGTGGATGGCA...AGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTAATGAACTCCTTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGAGCCCATGCTAGGATATaGTCCCCTGGGAGACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LMNSLNRNAAMKIYSGRRAHARI*SPGRQP Trigger: TGGTTGTCTCCCAGGGGAGCATATCCTAGCATGGGC...TCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAAGGAGTTCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTCGGATCTCTTTTCTTaGTCTGGTCCTCGGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LNRNAAMKIYSGRRRFLPSDLFS*SGPREI Trigger: TATCTCCCGAGGACCAGAGCAAGAAAAGAGATCCGA...AGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | TCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGATTCAAGTGGGCAAGTTaGATATCGGCAAGACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQKTKKRFQSSVERLRFKWAS*ISARLG Trigger: GCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAA...TCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CCA 90 bp | TGTGCTTTAATGAACTCCTTAAATAGAAACGCTGCTATGAAAATATACAGTGGGCGATCCCCAAGCTCTTaGAGCACTACAGAACGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CALMNSLNRNAAMKIYSGRSPSS*STTERT Trigger: GGTCCGTTCTGTAGTGCTCCAAGAGCTTGGGGATCG...CCCACTGTATATTTTCATAGCAGCGTTTCTATTTAAGGAGTTCATTAAAGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR TCA 90 bp | AATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATGTGCAAATGCTCTTCTaGCTTCACTGTCCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: NRNAAMKIYSGRRRFLPYVQMLF*LHCPEF Trigger: GAATTCTGGACAGTGAAGTCAGAAGAGCATTTGCAC...ATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAATCACAAGAAATGAAAATAGCCCCAGAAATCAAACAAATCGGGAGACCTACTGCTGGACTTGACTaGTCTGAGCTCTGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKSQEMKIAPEIKQIGRPTAGLD*SELWLE Trigger: TTCAAGCCAGAGCTCAGAGCAGTCAAGTCCAGCAGT...AGGTCTCCCGATTTGTTTGATTTCTGGGGCTATTTTCATTTCTTGTGATTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAATCACAAGAAATGAAAATAGCCCCAGAAATCAAACAAATCGGGAGACCTTGGCCCCTTGCTTCTTaGACTCTGTTTCCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKSQEMKIAPEIKQIGRPWPLAS*TLFPSL Trigger: AAGACTGGGAAACAGAGTGCAAGAAGCAAGGGGCCA...AGGTCTCCCGATTTGTTTGATTTCTGGGGCTATTTTCATTTCTTGTGATTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGTGGCCCCTTGCTTCTTaGACTCTGTTTCCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTSFPQKTKKRFQSSVEWPLAS*TLFPSL Trigger: AAGACTGGGAAACAGAGTGCAAGAAGCAAGGGGCCA...CTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTGCCATCCACAAGGCTaGAAGGTTACCCTAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LNRNAAMKIYSGRRRFLPCHPQG*KVTLKL Trigger: TAACTTTAGGGTAACCTTCCAGCCTTGTGGATGGCA...AGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | ACGCTAACAAACAGTTTCAGCAGATCTGAGAGAGGATGGTATTCGGATCTCTTTAAACCTTGCCAACTTTaGTCAGGGTTATTCCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLTNSFSRSERGWYSDLFKPCQL*SGLFLY Trigger: ATAGAGGAATAACCCTGAGCAAAGTTGGCAAGGTTT...AAAGAGATCCGAATACCATCCTCTCTCAGATCTGCTGAAACTGTTTGTTAGCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGCAAGAGAGGAATGGGTaGCTTTCTAGAGCCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFTSFPQKTKKRFQSSVEQERNG*LSRARN Trigger: GTTTCTGGCTCTAGAAAGCCACCCATTCCTCTCTTG...CTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR TCA 90 bp | TTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGAGGATTAAGGAACTGTaGTATCTGTTCCTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FTSFPQKTKKRFQSSVERRIKEL*YLFLAV Trigger: TACAGCAAGGAACAGATATCACAGTTCCTTAATCCT...CCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR GCA 90 bp | AATAGAAACGCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATATGGAAATGTGCAAATaGTCTTCTGACTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NRNAAMKIYSGRRRFLPYMEMCK*SSDFTV Trigger: GACAGTGAAGTCAGAAGAGCATTTGCACATTTCCAT...ATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGCGTTTCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| 3UTR CAA 72 bp | AAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTaGCGAATGAGGTCTCTAGGACATCATTGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTKKRFQSSVER*RMRSLGHHCWD Trigger: GTCCCAACAATGATGTCCTAGAGACCTCATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAATCACAAGAAATGAAAATAGCCCCAGAAATCAAACAAATCGGGAGACCTAAACCTTGCCAACTTTaGTCAGGGTTATTCCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FKSQEMKIAPEIKQIGRPKPCQL*SGLFLY Trigger: ATAGAGGAATAACCCTGAGCAAAGTTGGCAAGGTTT...AGGTCTCCCGATTTGTTTGATTTCTGGGGCTATTTTCATTTCTTGTGATTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGTTTGTTAGGGTCACTTaGTATATAGAAGCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LFTSFPQKTKKRFQSSVEFVRVT*YIEAST Trigger: TGTGGAGGCTTCTATATAGCAAGTGACCCTAACAAA...CTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS TCA 90 bp | TCACTGCCTCCGGGGTGGTGCCAGGACAGGCGCGGTCCACGGCCCTaGTGGAAATGTGCAAATGCTCTTCTGACTTCACTGTCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: SLPPGWCQDRRGPRP*WKCANALLTSLSRI Trigger: AATTCTGGACAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGCGCCTGTCCTGGCACCACCCCGGAGGCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS GCA 90 bp | GGGGTGGTGCCAGGACAGGCGCGGTCCACGGCCCTGATGGAAATGTaGAAATGCTCTTCTGACTTCACTGTCCAGAATTCGATTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVVPGQARSTALMEM*KCSSDFTVQNSIRD Trigger: GTCCCTAATCGAATTCTGGACAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGCGCCTGTCCTGGCACCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS TCA 90 bp | TTCCTCTATACTGCTGGACTTGACTGCTCTGAGCTCTGGCTTGAATaGTGGCCATGGTTACCTGGAAGGCCTGAGGTGCCAGCCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLYTAGLDCSELWLE*WPWLPGRPEVPALQ Trigger: CTGGAGGGCTGGCACCTCAGGCCTTCCAGGTAACCATGGCCATCATTCAAGCCAGAGCTCAGAGCAGTCAAGTCCAGCAGTATAGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS GCA 90 bp | GTGCCAGGACAGGCGCGGTCCACGGCCCTGATGGAAATGTGCAAATaGTCTTCTGACTTCACTGTCCAGAATTCGATTAGGGACCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VPGQARSTALMEMCK*SSDFTVQNSIRDPE Trigger: TTCTGGGTCCCTAATCGAATTCTGGACAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGCGCCTGTCCTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CAA 90 bp | GCCCTCAGTTTCAAGTGGGCAAGTTGGATATCGGCAAGACTAGGCATCTCATCCGGAGAAGCTGCACTCTaGACAAGCCGCTCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSFKWASWISARLGISSGEAAL*TSRSQP Trigger: AGGCTGTGAGCGGCTTGTCAAGAGTGCAGCTTCTCC...GGATGAGATGCCTAGTCTTGCCGATATCCAACTTGCCCACTTGAAACTGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCAAAGGGCCCTCAGTTTCAAGTGGGCAAGTTGGATATCGGCAAGACTCTGGCCCCTTGCTTCTaGCACTCTGTTTCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RQAKGPQFQVGKLDIGKTLAPCF*HSVSQS Trigger: AGACTGGGAAACAGAGTGCAAGAAGCAAGGGGCCAG...AGTCTTGCCGATATCCAACTTGCCCACTTGAAACTGAGGGCCCTTTGCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS GCA 90 bp | ATCGACTCCACTGCTCGGTCCACGGCCCTGATGGAAATGTGCAAATaGTCTTCTGACTTCACTGTCCAGAATTCGATTAGGGACCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IDSTARSTALMEMCK*SSDFTVQNSIRDPE Trigger: TTCTGGGTCCCTAATCGAATTCTGGACAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGAGCAGTGGAGTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS GCA 90 bp | TGTAGCATCGACTCCACTGCTCGGTCCACGGCCCTGATGGAAATGTaGAAATGCTCTTCTGACTTCACTGTCCAGAATTCGATTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSIDSTARSTALMEM*KCSSDFTVQNSIRD Trigger: GTCCCTAATCGAATTCTGGACAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGAGCAGTGGAGTCGATGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
||
| CDS CCA 90 bp | TCACTACTCAGAGGAGTATCCTGCTTTCGCTGCCATCCACAAGGCTaGAAGGTTACCCTAAAGTTAGTGCAGATCAGAGTTCCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLRGVSCFRCHPQG*KVTLKLVQIRVPGR Trigger: CCTGCCTGGAACTCTGATCTGCACTAACTTTAGGGTAACCTTCCAGCCTTGTGGATGGCAGCGAAAGCAGGATACTCCTCTGAGTAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCTATGAAAATATACAGTGGGAGGAGACGGTTTCTCCCTTATTCACCTCGTGGAGAAGCTGCACTCTaGACAAGCCGCTCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAMKIYSGRRRFLPYSPRGEAAL*TSRSQP Trigger: AGGCTGTGAGCGGCTTGTCAAGAGTGCAGCTTCTCC...ACGAGGTGAATAAGGGAGAAACCGTCTCCTCCCACTGTATATTTTCATAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGACCAGCCTCTGGCCCCTaGCTTCTTGCACTCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EETVSPLFTSFPQKTKKRPASGP*LLALCF Trigger: GAAACAGAGTGCAAGAAGCAAGGGGCCAGAGGCTGG...TCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGACTGATGAAAAGGGTCTCTCATGTCACAGTTTTGACGGCCATCCAAAACCAGCCTCTGGCCCCTaGCTTCTTGCACTCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTDEKGLSCHSFDGHPKPASGP*LLALCF Trigger: GAAACAGAGTGCAAGAAGCAAGGGGCCAGAGGCTGG...TTTTGGATGGCCGTCAAAACTGTGACATGAGAGACCCTTTTCATCAGTCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGACGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGACTGGCCCCTTGCTTCTaGCACTCTGTTTCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EETVSPLFTSFPQKTKKRLAPCF*HSVSQS Trigger: AGACTGGGAAACAGAGTGCAAGAAGCAAGGGGCCAG...TCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCGTCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CAA 90 bp | AATGAGGTCTCTAGGACATCATTGTTGGGACTGATGAAAAGGGTCTCTCATGTCGAGGAGAGGAGGCCATaGAAATCACGATCCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NEVSRTSLLGLMKRVSHVEERRP*KSRSPS Trigger: GCTTGGGGATCGTGATTTCAATGGCCTCCTCTCCTC...GACATGAGAGACCCTTTTCATCAGTCCCAACAATGATGTCCTAGAGACCTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
||
| CDS-3UTR CAA 90 bp | AATGAGGTCTCTAGGACATCATTGTTGGGACTGATGAAAAGGGTCTCTCATGTCACATCGAACCTCTCATaGACCGTGCTAACCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NEVSRTSLLGLMKRVSHVTSNLS*TVLTLQ Trigger: CTGGAGGGTTAGCACGGTCAATGAGAGGTTCGATGT...GACATGAGAGACCCTTTTCATCAGTCCCAACAATGATGTCCTAGAGACCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGACTGATGAAAAGGGTCTCTCATGTCACAGTTTTGACGGCCATCCAAAATTCGGATCTCTTTTCTaGCTCTGGTCCTCGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGTDEKGLSCHSFDGHPKFGSLF*LWSSGD Trigger: ATCTCCCGAGGACCAGAGCAAGAAAAGAGATCCGAA...TTTTGGATGGCCGTCAAAACTGTGACATGAGAGACCCTTTTCATCAGTCCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
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| CDS GCA 90 bp | AAGGCAAAATCATTTTCACTACTCAGAGGAGTATCCTGCTTTCGCTaGCATCCACAAGGCTGGAAGGTTACCCTAAAGTTAGTGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: KAKSFSLLRGVSCFR*HPQGWKVTLKLVQI Trigger: GATCTGCACTAACTTTAGGGTAACCTTCCAGCCTTGTGGATGGCAGCGAAAGCAGGATACTCCTCTGAGTAGTGAAAATGATTTTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS-3UTR CAA 90 bp | TTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGTCTATACTGCTGGACTaGACTGCTCTGAGCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: FPQKTKKRFQSSVERLRMSILLD*TALSSG Trigger: GCCAGAGCTCAGAGCAGTCAAGTCCAGCAGTATAGA...CATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGAGGTCTTCTATACTGCTGGACTaGACTGCTCTGAGCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QKTKKRFQSSVERLRMRSSILLD*TALSSG Trigger: GCCAGAGCTCAGAGCAGTCAAGTCCAGCAGTATAGA...AGACCTCATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS-3UTR CAA 90 bp | TTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGACATCGAACCTCTCATaGACCGTGCTAACCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FPQKTKKRFQSSVERLRMTSNLS*TVLTLQ Trigger: CTGGAGGGTTAGCACGGTCAATGAGAGGTTCGATGT...CATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS-3UTR CAA 90 bp | TTCCCACAGAAGACTAAGAAAAGATTTCAAAGTAGTGTAGAGAGGTTGCGAATGCTAGAGCCAGAAACCTaGCCAACTTTGCTCAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: FPQKTKKRFQSSVERLRMLEPET*PTLLRV Trigger: AACCCTGAGCAAAGTTGGCAAGGTTTCTGGCTCTAG...CATTCGCAACCTCTCTACACTACTTTGAAATCTTTTCTTAGTCTTCTGTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS-3UTR CAA 90 bp | CGGTTTCTCCCTTATTCACCTCGTTCCCACAGAAGACTAAGAAAAGATTTCAAAGCTCTGATATCTTCTTaGTTAGGGTCACTTGCTATA | + |
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Preference number: 5 (lower is better) Translates to: RFLPYSPRSHRRLRKDFKALISS*LGSLAI Trigger: TATAGCAAGTGACCCTAACAAAGAAGATATCAGAGC...TTTGAAATCTTTTCTTAGTCTTCTGTGGGAACGAGGTGAATAAGGGAGAAACCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
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| CDS TCA 72 bp | CCGGGGTGGTGCCAGGACAGGCGCGGTCCACGGCCCTaGTGGAAATGTGCAAATGCTCTTCTGACTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: PGWCQDRRGPRP*WKCANALLTSL Trigger: CAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGCGCCTGTCCTGGCACCACCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
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| CDS GCA 72 bp | TTGCTATATAGAAGCCTCCACATCGAAGAAGGTCACTaGCTCCGGGGTGGTGCCAGGACAGGCGCGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLYRSLHIEEGH*LRGGARTGAVH Trigger: GTGGACCGCGCCTGTCCTGGCACCACCCCGGAGGCAGTGACCTTCTTCGATGTGGAGGCTTCTATATAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
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| CDS CCA 72 bp | AAGCTGATGACTGCTGGGCTCCGGCATCCTGTTCCCTaGGTTAGACTTCGGTCCAGAGAGCCCCATCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KLMTAGLRHPVP*VRLRSREPHLW Trigger: CCAGAGATGGGGCTCTCTGGACCGAAGTCTAACCCAGGGAACAGGATGCCGGAGCCCAGCAGTCATCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS TCA 72 bp | ACTGCTGGACTTGACTGCTCTGAGCTCTGGCTTGAATaGTGGCCATGGTTACCTGGAAGGCCTGAGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TAGLDCSELWLE*WPWLPGRPEVP Trigger: TGGCACCTCAGGCCTTCCAGGTAACCATGGCCATCATTCAAGCCAGAGCTCAGAGCAGTCAAGTCCAGCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS GCA 72 bp | TTGAATGATGGCCATGGTTACCTGGAAGGCCTGAGGTaGCAGCCCTCCAGCCTCAAAACCAACTCGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LNDGHGYLEGLR*QPSSLKTNSKQ Trigger: CTGCTTCGAGTTGGTTTTGAGGCTGGAGGGCTGGCACCTCAGGCCTTCCAGGTAACCATGGCCATCATTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS CAA 90 bp | GGTTATTCCTCTATACTGCTGGACTTGACTGCTCTGAGCTCTGGCTaGAATGATGGCCATGGTTACCTGGAAGGCCTGAGGTGCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GYSSILLDLTALSSG*NDGHGYLEGLRCQP Trigger: GGGCTGGCACCTCAGGCCTTCCAGGTAACCATGGCCATCATTCAAGCCAGAGCTCAGAGCAGTCAAGTCCAGCAGTATAGAGGAATAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS TCA 72 bp | CCTGTAGCATCGACTCCACTGCTCGGTCCACGGCCCTaGTGGAAATGTGCAAATGCTCTTCTGACTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: PVASTPLLGPRP*WKCANALLTSL Trigger: CAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGAGCAGTGGAGTCGATGCTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| CDS GCA 72 bp | CAGGCGCGGTCCACGGCCCTGATGGAAATGTGCAAATaGTCTTCTGACTTCACTGTCCAGAATTCGATTAGG | + |
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Preference number: 6 (lower is better) Translates to: QARSTALMEMCK*SSDFTVQNSIR Trigger: CCTAATCGAATTCTGGACAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGCGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
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| CDS GCA 72 bp | ACTGCTCGGTCCACGGCCCTGATGGAAATGTGCAAATaGTCTTCTGACTTCACTGTCCAGAATTCGATTAGG | + |
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Preference number: 6 (lower is better) Translates to: TARSTALMEMCK*SSDFTVQNSIR Trigger: CCTAATCGAATTCTGGACAGTGAAGTCAGAAGAGCATTTGCACATTTCCATCAGGGCCGTGGACCGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129925.8 |
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| CDS CCA 72 bp | AGAGGAGTATCCTGCTTTCGCTGCCATCCACAAGGCTaGAAGGTTACCCTAAAGTTAGTGCAGATCAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: RGVSCFRCHPQG*KVTLKLVQIRV Trigger: AACTCTGATCTGCACTAACTTTAGGGTAACCTTCCAGCCTTGTGGATGGCAGCGAAAGCAGGATACTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS CAA 90 bp | AGCTGCACTCTTGACAAGCCGCTCACAGCCTCTAATCGACCAATGTaGATCAAGGCAAAATCATTTTCACTACTCAGAGGAGTATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SCTLDKPLTASNRPM*IKAKSFSLLRGVSC Trigger: GCAGGATACTCCTCTGAGTAGTGAAAATGATTTTGCCTTGATCAACATTGGTCGATTAGAGGCTGTGAGCGGCTTGTCAAGAGTGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS CAA 72 bp | AACTTTGCTCAGGGTTATTCCTCTATACTGCTGGACTaGACTGCTCTGAGCTCTGGCTTGAATGATGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: NFAQGYSSILLD*TALSSGLNDGH Trigger: ATGGCCATCATTCAAGCCAGAGCTCAGAGCAGTCAAGTCCAGCAGTATAGAGGAATAACCCTGAGCAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS CAA 72 bp | AAGAGAGGAATGGGTGGCTTTCTAGAGCCAGAAACCTaGCCAACTTTGCTCAGGGTTATTCCTCTATACTGC | + |
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Preference number: 6 (lower is better) Translates to: KRGMGGFLEPET*PTLLRVIPLYC Trigger: GCAGTATAGAGGAATAACCCTGAGCAAAGTTGGCAAGGTTTCTGGCTCTAGAAAGCCACCCATTCCTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054356.16 ENSMUST00000129925.8 |
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| CDS GCA 72 bp | CTCCACTGCTCTGATATCTTCTTTGTTAGGGTCACTTaGTATATAGAAGCCTCCACATCGAAGAAGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: LHCSDIFFVRVT*YIEASTSKKVT Trigger: AGTGACCTTCTTCGATGTGGAGGCTTCTATATAGCAAGTGACCCTAACAAAGAAGATATCAGAGCAGTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054356.16 |
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