Pregenerated sensors for MTMR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015214Ensembl transcript IDs: ENSMUST00000015358.8, ENSMUST00000114601.8, ENSMUST00000130909.8, ENSMUST00000132837.5, ENSMUST00000146213.8, ENSMUST00000149323.8, ENSMUST00000156756.3
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAAACACATCTCCAACTCTGAAGGGCCTGGTGACACACAGAAGTaGACATGGTGGTGGTGGTGGCTATGCTGGCATTGCACACGTCGA | + |
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Preference number: 1 (lower is better) Translates to: LKHISNSEGPGDTQK*TWWWWWLCWHCTRR Trigger: TCGACGTGTGCAATGCCAGCATAGCCACCACCACCACCATGTCCACTTCTGTGTGTCACCAGGCCCTTCAGAGTTGGAGATGTGTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 90 bp | AGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTaGGTCCGAGAGGGGAAAACCATGGAAGAGCATGTTATGCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RSTLLTVERGLPSQG*VREGKTMEEHVMLS Trigger: TGAAAGCATAACATGCTCTTCCATGGTTTTCCCCTCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 90 bp | AAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAGGGGAAAACCATaGAAGAGCATGTTATGCTTTCAGACCCATAGAAATAAACCCATA | + |
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Preference number: 1 (lower is better) Translates to: KEACQARAGSERGKP*KSMLCFQTHRNKPI Trigger: TATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCCCCTCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 90 bp | GCCATCTGTACCAGGCTAGCTGACCTCAACAAGCAGCCATCCCCATaGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCT | + |
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Preference number: 1 (lower is better) Translates to: AICTRLADLNKQPSP*LLWFCQNIIQSTLS Trigger: AGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTGAGGTCAGCTAGCCTGGTACAGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 90 bp | ACCAGGCTAGCTGACCTCAACAAGCAGCCATCCCCATGGCTTCTCTaGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTT | + |
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Preference number: 1 (lower is better) Translates to: TRLADLNKQPSPWLL*FCQNIIQSTLSSIV Trigger: AACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTGAGGTCAGCTAGCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR TCA 90 bp | ATTCATAGTTTGCTGCATCCTGAGGGAACCTGCTGCTACCACCAATaGATGAATGGGCTGTGCCATCTCAAAAGACAAGTACCAGAGTTA | + |
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Preference number: 1 (lower is better) Translates to: IHSLLHPEGTCCYHQ*MNGLCHLKRQVPEL Trigger: TAACTCTGGTACTTGTCTTTTGAGATGGCACAGCCCATTCATTCATTGGTGGTAGCAGCAGGTTCCCTCAGGATGCAGCAAACTATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 90 bp | ATATTTAATTTCATGAGTATTTTAGCCACTGGTTGCCTTAAAGTATaGCCAGGCAGTCATGTAAATCAACTGAGAAGAGATCGTGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: IFNFMSILATGCLKV*PGSHVNQLRRDRGK Trigger: TTTACCACGATCTCTTCTCAGTTGATTTACATGACTGCCTGGCCATACTTTAAGGCAACCAGTGGCTAAAATACTCATGAAATTAAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTTTTAGGGGTGCTGCAGGCATGGCAGCTGGGAGGCCATGGCTTGAGCAGGCTGCCAAGCCAGGGCTaGGTCCGAGAGGGGAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: TFLGVLQAWQLGGHGLSRLPSQG*VREGKT Trigger: GGTTTTCCCCTCTCGGACCCAGCCCTGGCTTGGCAG...CCTGCTCAAGCCATGGCCTCCCAGCTGCCATGCCTGCAGCACCCCTAAAAATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGGTGGTTCACAGGGTaGGGCTGCTCGCAAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: EINTVNCGKRPAKPGLGPRWFTG*GCSQKG Trigger: CCCCTTTTGCGAGCAGCCTCACCCTGTGAACCACCT...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGTGCAGAGTTGCTGCCTaGGCCCTCAGTTTACCTGCG | + |
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Preference number: 2 (lower is better) Translates to: EINTVNCGKRPAKPGLGPCRVAA*ALSLPA Trigger: CGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCA...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTAAGTGGACATGGTGGTaGTGGTGGCTATGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPKWTWW*WWLCWH Trigger: ATGCCAGCATAGCCACCACCACCACCATGTCCACTT...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAGCTACCACCAATGAATaGATGGGCTGTGCCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: INTVNCGKRPAKPGLGPRATTNE*MGCAIS Trigger: TGAGATGGCACAGCCCATTCATTCATTGGTGGTAGC...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAACAAGGCCAGAGGACTaGGCATTCATAGTTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: INTVNCGKRPAKPGLGPRTRPED*AFIVCC Trigger: GCAGCAAACTATGAATGCTCAGTCCTCTGGCCTTGT...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | TGCGCAAAAGGCAGCATGGACTCCGTTGGGAAAGAATTTCTCCTACAGCACAGTATTGTGCCAAAAGGCTaGGAGGAGCCACATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CAKGSMDSVGKEFLLQHSIVPKG*EEPHGW Trigger: CCAGCCATGTGGCTCCTCTCAGCCTTTTGGCACAAT...ACTGTGCTGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTGCCTTTTGCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAACAAATGCAGAGTTGCTaGCTGAGCCCTCAGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKQMQSC*LSPQFT Trigger: GGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTG...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTGCACTGCATTCAATCTaGTTTCTCCCAAGCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPALHSI*FLPSYL Trigger: CAGGTAGCTTGGGAGAAACCAGATTGAATGCAGTGC...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCGCACTGCATTCAATCTaGTTTCTCCCAAGCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: RPTNAELLPEPSVYLRQGALHSI*FLPSYL Trigger: CAGGTAGCTTGGGAGAAACCAGATTGAATGCAGTGC...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTTGGACATGGTGGTGGTaGTGGCTATGCTGGCATTGC | + |
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Preference number: 2 (lower is better) Translates to: AAIPMASLVLSKHYPVHSWTWWW*WLCWHC Trigger: GCAATGCCAGCATAGCCACCACCACCACCATGTCCA...AGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTCAGAAGTGGACATGGTaGTGGTGGTGGCTATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: AAIPMASLVLSKHYPVHSQKWTW*WWWLCW Trigger: CCAGCATAGCCACCACCACCACCATGTCCACTTCTG...AGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCATTGTGCCAAAAGGCTaGGAGGAGCCACATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QQAAIPMASLVLSKHYPVIVPKG*EEPHGW Trigger: CCAGCCATGTGGCTCCTCTCAGCCTTTTGGCACAAT...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTACAAGGCCAGAGGACTaGGCATTCATAGTTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: AAIPMASLVLSKHYPVHSTRPED*AFIVCC Trigger: GCAGCAAACTATGAATGCTCAGTCCTCTGGCCTTGT...AGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTAAGCCAAAGCTGTCCCTaGACTCACAGCTTCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLSQSCP*THSFSY Trigger: GTAGGAGAAGCTGTGAGTTCAGGGACAGCTTTGGCT...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAGGTTGCCTTAAAGTATaGCCAGGCAGTCATGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: INTVNCGKRPAKPGLGPRGCLKV*PGSHVN Trigger: ATTTACATGACTGCCTGGCCATACTTTAAGGCAACC...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCACACAGAAGTGGACATaGTGGTGGTGGTGGCTATGC | + |
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Preference number: 2 (lower is better) Translates to: QQAAIPMASLVLSKHYPVTQKWT*WWWWLC Trigger: GCATAGCCACCACCACCACCATGTCCACTTCTGTGT...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTCTGAGAGGAGCCACATaGCTGGTGATGTGTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: AAIPMASLVLSKHYPVHSLRGAT*LVMCSI Trigger: TATAGAACACATCACCAGCCATGTGGCTCCTCTCAG...AGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCCTAGAAGGACTGGTTaGGTAGCAGAGATCAACACT | + |
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Preference number: 2 (lower is better) Translates to: QQAAIPMASLVLSKHYPVPRRTG*VAEINT Trigger: AGTGTTGATCTCTGCTACTCAACCAGTCCTTCTAGG...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTACAGCATGGACTCCGTTaGGAAAGAATTTCTCCTACA | + |
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Preference number: 2 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLQHGLR*ERISPT Trigger: TGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTG...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCCACCAATGAATGAATaGGCTGTGCCATCTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QQAAIPMASLVLSKHYPVPPMNE*AVPSQK Trigger: CTTTTGAGATGGCACAGCCCATTCATTCATTGGTGG...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTGGTTGCCTTAAAGTATaGCCAGGCAGTCATGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: AAIPMASLVLSKHYPVHSGCLKV*PGSHVN Trigger: ATTTACATGACTGCCTGGCCATACTTTAAGGCAACC...AGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTAGGTGGTTCACAGGGTaGGGCTGCTCGCAAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTRWFTG*GCSQKG Trigger: CCCCTTTTGCGAGCAGCCTCACCCTGTGAACCACCT...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTAGAGAGGGGAAAACCATaGAAGAGCATGTTATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLERGKP*KSMLCF Trigger: AAAGCATAACATGCTCTTCCATGGTTTTCCCCTCTC...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTACTCCTACCTCAGATATaGCAGTTTATCCATCTACAA | + |
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Preference number: 2 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLLLPQI*QFIHLQ Trigger: TTGTAGATGGATAAACTGCCATATCTGAGGTAGGAG...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCTCCTACCTCAGATATaGCAGTTTATCCATCTACAA | + |
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Preference number: 2 (lower is better) Translates to: QQAAIPMASLVLSKHYPVLLPQI*QFIHLQ Trigger: TTGTAGATGGATAAACTGCCATATCTGAGGTAGGAG...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCACAAATGCAGAGTTGCTaGCTGAGCCCTCAGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: ASLVLSKHYPVHSIFNSSQMQSC*LSPQFT Trigger: GGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTG...TGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTTGGTGGTGGTGGCTATaGTGGCATTGCACACGTCGA | + |
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Preference number: 2 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTWWWWL*WHCTRR Trigger: TCGACGTGTGCAATGCCAGCATAGCCACCACCACCA...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTAAGTGGACATGGTGGTaGTGGTGGCTATGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTKWTWW*WWLCWH Trigger: ATGCCAGCATAGCCACCACCACCACCATGTCCACTT...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTCTGCACAGCATCCAGTaGTTTGACACTGACAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTLHSIQ*FDTDKR Trigger: CCTCTTGTCAGTGTCAAATCACTGGATGCTGTGCAG...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCAACAGTTTTTAAATTGTaGCAAAAGGCTGAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: ASLVLSKHYPVHSIFNSSTVFKL*QKAERS Trigger: GCTCCTCTCAGCCTTTTGGCACAATTTAAAAACTGT...TGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTTTAATTCAAATGTGCTaGGCAAAAGGCAGCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTLIQMC*AKGSMD Trigger: GTCCATGCTGCCTTTTGCGCAGCACATTTGAATTAA...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 72 bp | AGAACCATAATATCAATGGCCAGGTCCCCGAGCTGCTaGAAGACAATAGAGCAGCCGGATGGCCCGGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: RTIISMARSPSC*KTIEQPDGPGY Trigger: GTACCCCGGGCCATCCGGCTGCTCTATTGTCTTCCAGCAGCTCGGGGACCTGGCCATTGATATTATGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR TCA 72 bp | CAAGCTACCTGTACAAGACACAGGTGGTTCACAGGGTaGGGCTGCTCGCAAAAGGGGCACAGGCTGTTCACA | + |
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Preference number: 3 (lower is better) Translates to: QATCTRHRWFTG*GCSQKGHRLFT Trigger: TGTGAACAGCCTGTGCCCCTTTTGCGAGCAGCCTCACCCTGTGAACCACCTGTGTCTTGTACAGGTAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR GCA 72 bp | GCTGTCATAGAGGGAGGCCAACAAATGCAGAGTTGCTaGCTGAGCCCTCAGTTTACCTGCGACAAGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: AVIEGGQQMQSC*LSPQFTCDKAR Trigger: TCTGGCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCTCCCTCTATGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 72 bp | CTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTaGGTCCGAGAGGGGAAAACCATGGAAGAGCATGTT | + |
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Preference number: 3 (lower is better) Translates to: LLTVERGLPSQG*VREGKTMEEHV Trigger: AACATGCTCTTCCATGGTTTTCCCCTCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR CCA 72 bp | AACTCTGAAGGGCCTGGTGACACACAGAAGTGGACATaGTGGTGGTGGTGGCTATGCTGGCATTGCACACGT | + |
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Preference number: 3 (lower is better) Translates to: NSEGPGDTQKWT*WWWWLCWHCTR Trigger: ACGTGTGCAATGCCAGCATAGCCACCACCACCACCATGTCCACTTCTGTGTGTCACCAGGCCCTTCAGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| 3UTR-3UTR CAA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCCAACAAATGCAGAGTaGCTGCCTGAGCCCTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPPTNAE*LPEPSV Trigger: AACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGG...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATTTTTAGGGGTGCTGCAGGCATGGCAGCTGGGAGGCCATGGCTTGAGCAGGACAGCATCCAGTGATTaGACACTGACAAGAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TFLGVLQAWQLGGHGLSRTASSD*TLTRGR Trigger: TCTTCCTCTTGTCAGTGTCAAATCACTGGATGCTGT...CCTGCTCAAGCCATGGCCTCCCAGCTGCCATGCCTGCAGCACCCCTAAAAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CCA 72 bp | TGCCAAGCCAGGGCTGGGTCCGAGAGGGGAAAACCATaGAAGAGCATGTTATGCTTTCAGACCCATAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CQARAGSERGKP*KSMLCFQTHRN Trigger: ATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCCCCTCTCGGACCCAGCCCTGGCTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CCA 72 bp | ACCAGGCTAGCTGACCTCAACAAGCAGCCATCCCCATaGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRLADLNKQPSP*LLWFCQNIIQS Trigger: GGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTGAGGTCAGCTAGCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR TCA 72 bp | TGCATCCTGAGGGAACCTGCTGCTACCACCAATGAATaGATGGGCTGTGCCATCTCAAAAGACAAGTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: CILREPAATTNE*MGCAISKDKYQ Trigger: CTGGTACTTGTCTTTTGAGATGGCACAGCCCATTCATTCATTGGTGGTAGCAGCAGGTTCCCTCAGGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR TCA 72 bp | CTGTCCCAGAACTCGATATGTAGCCAAAGCTGTCCCTaGACTCACAGCTTCTCCTACCTCAGATATGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSQNSICSQSCP*THSFSYLRYGS Trigger: ACTGCCATATCTGAGGTAGGAGAAGCTGTGAGTTCAGGGACAGCTTTGGCTACATATCGAGTTCTGGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCTGAGCATTCATAGTTaGCTGCATCCTGAGGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: QQAAIPMASLVLSKHYPVLSIHS*LHPEGT Trigger: GGTTCCCTCAGGATGCAGCAAACTATGAATGCTCAG...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR TCA 72 bp | TTGCTGCATCCTGAGGGAACCTGCTGCTACCACCAATaGATGAATGGGCTGTGCCATCTCAAAAGACAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLHPEGTCCYHQ*MNGLCHLKRQV Trigger: TACTTGTCTTTTGAGATGGCACAGCCCATTCATTCATTGGTGGTAGCAGCAGGTTCCCTCAGGATGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CCA 72 bp | GCTGACCTCAACAAGCAGCCATCCCCATGGCTTCTCTaGTTCTGTCAAAACATTATCCAGTCCACTCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: ADLNKQPSPWLL*FCQNIIQSTLS Trigger: AGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTGAGGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CCA 72 bp | TCAAATGTGCTGCGCAAAAGGCAGCATGGACTCCGTTaGGAAAGAATTTCTCCTACAGCACAGTTTAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNVLRKRQHGLR*ERISPTAQFSR Trigger: TCTGCTAAACTGTGCTGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTGCCTTTTGCGCAGCACATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR GCA 72 bp | GGGTCCGAGAGGGGAAAACCATGGAAGAGCATGTTATaGTTTCAGACCCATAGAAATAAACCCATAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSERGKPWKSML*FQTHRNKPITA Trigger: TGCTGTTATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCCCCTCTCGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCACAGCTTCTCCTACCTCAGATATGGCAGTTTATCCATCTACAAATAAGGCTGAGCATTCATAGTTaGCTGCATCCTGAGGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: NSQLLLPQIWQFIHLQIRLSIHS*LHPEGT Trigger: GGTTCCCTCAGGATGCAGCAAACTATGAATGCTCAG...CCTTATTTGTAGATGGATAAACTGCCATATCTGAGGTAGGAGAAGCTGTGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATTTTTGGTATTGATTTaGAGACAGGGCTCCACAATA | + |
|
Preference number: 3 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLFLVLI*RQGSTI Trigger: TATTGTGGAGCCCTGTCTCAAAATCAATACCAAAAA...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCAACAGCATCCAGTGATTaGACACTGACAAGAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASLVLSKHYPVHSIFNSSTASSD*TLTRGR Trigger: TCTTCCTCTTGTCAGTGTCAAATCACTGGATGCTGT...TGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CCA 72 bp | TTTTTAAATTGTGCCAAAAGGCTGAGAGGAGCCACATaGCTGGTGATGTGTTCTATAAGTAAACGAGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FLNCAKRLRGAT*LVMCSISKRVV Trigger: AACAACTCGTTTACTTATAGAACACATCACCAGCCATGTGGCTCCTCTCAGCCTTTTGGCACAATTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CCA 72 bp | TTCATGAGTATTTTAGCCACTGGTTGCCTTAAAGTATaGCCAGGCAGTCATGTAAATCAACTGAGAAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FMSILATGCLKV*PGSHVNQLRRD Trigger: ATCTCTTCTCAGTTGATTTACATGACTGCCTGGCCATACTTTAAGGCAACCAGTGGCTAAAATACTCATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CCA 72 bp | CTGTCCCTGAACTCACAGCTTCTCCTACCTCAGATATaGCAGTTTATCCATCTACAAATAAGGTTTTATATC | + |
|
Preference number: 3 (lower is better) Translates to: LSLNSQLLLPQI*QFIHLQIRFYI Trigger: GATATAAAACCTTATTTGTAGATGGATAAACTGCCATATCTGAGGTAGGAGAAGCTGTGAGTTCAGGGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAGTCTCAATGCTGGGGTaGCGGGAGCTGGCCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRVSMLG*RELAEA Trigger: CGCCTCGGCCAGCTCCCGGCACCCCAGCATTGAGAC...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGGTGGCCATCTCCCGCTaGAAGTCCTCCACACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EINTVNCGKRPAKPGLGPVAISR*KSSTRF Trigger: GAAGCGTGTGGAGGACTTGCAGCGGGAGATGGCCAC...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | TGCGCAAAAGGCAGCATGGACTCCGTTGGGAAAGAATTTCTCCTACAGCACAGTGTCTCAATGCTGGGGTaGCGGGAGCTGGCCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CAKGSMDSVGKEFLLQHSVSMLG*RELAEA Trigger: CGCCTCGGCCAGCTCCCGGCACCCCAGCATTGAGAC...ACTGTGCTGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTGCCTTTTGCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTTTAGGGGTGCTGCAGGCATGGCAGCTGGGAGGCCATGGCTTGAGCAGGGCCAGAGATGTGAGCTaGGATGTTCGATCCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLGVLQAWQLGGHGLSRARDVS*DVRSHP Trigger: TGGGTGGGATCGAACATCCCAGCTCACATCTCTGGC...CCTGCTCAAGCCATGGCCTCCCAGCTGCCATGCCTGCAGCACCCCTAAAAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGACCTCTCAGAGGAAGATaGGATGGTCCGGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRPLRGR*DGPGGH Trigger: ATGGCCACCCGGACCATCTCATCTTCCTCTGAGAGG...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTTTAGGGGTGCTGCAGGCATGGCAGCTGGGAGGCCATGGCTTGAGCAGGATCAGCAATTCTCACTaGCCCAGCAAGGAGAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFLGVLQAWQLGGHGLSRISNSH*PSKENP Trigger: CGGGTTCTCCTTGCTGGGGCAGTGAGAATTGCTGAT...CCTGCTCAAGCCATGGCCTCCCAGCTGCCATGCCTGCAGCACCCCTAAAAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | TGCGCAAAAGGCAGCATGGACTCCGTTGGGAAAGAATTTCTCCTACAGCACAGTCAAGGGTCTCAATGCTaGGGTGCCGGGAGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CAKGSMDSVGKEFLLQHSQGSQC*GAGSWP Trigger: CGGCCAGCTCCCGGCACCCCAGCATTGAGACCCTTG...ACTGTGCTGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTGCCTTTTGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTGCATTGCCAGAGATGTaGGCTGGGATGTTCGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPALPEM*AGMFDP Trigger: GGGATCGAACATCCCAGCTCACATCTCTGGCAATGC...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAACCTCTCAGAGGAAGATaGGATGGTCCGGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKPLRGR*DGPGGH Trigger: ATGGCCACCCGGACCATCTCATCTTCCTCTGAGAGG...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTTTAGGGGTGCTGCAGGCATGGCAGCTGGGAGGCCATGGCTTGAGCAGGCAGGGTCCCACTCACTaGTCCCATAAATGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TFLGVLQAWQLGGHGLSRQGPTH*SHKWTD Trigger: ATCTGTCCATTTATGGGAGCAGTGAGTGGGACCCTG...CCTGCTCAAGCCATGGCCTCCCAGCTGCCATGCCTGCAGCACCCCTAAAAATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTACAAGGGTCTCAATGCTaGGGTGCCGGGAGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLQGSQC*GAGSWP Trigger: CGGCCAGCTCCCGGCACCCCAGCATTGAGACCCTTG...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCGGTCAGCATCTGCATaGTTGTCATCACCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPRSASA*LSSPWP Trigger: GGGCCATGGTGATGACAACCATGCAGATGCTGACCG...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGATTCTGGGTGAATCCATaGCAACACAGGGACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRFWVNP*QHRDSA Trigger: GGCAGAGTCCCTGTGTTGTCATGGATTCACCCAGAA...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | AATCTGGTTTCTCCCAAGCTACCTGTACAAGACACAGGTGGTTCACAGGGTGAGGTGGCCATCTCCCGCTaGAAGTCCTCCACACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLVSPKLPVQDTGGSQGEVAISR*KSSTRF Trigger: GAAGCGTGTGGAGGACTTGCAGCGGGAGATGGCCAC...CTCACCCTGTGAACCACCTGTGTCTTGTACAGGTAGCTTGGGAGAAACCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CAA 72 bp | ACCTGCGACAAGGCCAGAGGACTGAGCATTCATAGTTaGCTGCATCCTGAGGGAACCTGCTGCTACCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TCDKARGLSIHS*LHPEGTCCYHQ Trigger: TTGGTGGTAGCAGCAGGTTCCCTCAGGATGCAGCAAACTATGAATGCTCAGTCCTCTGGCCTTGTCGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CAA 72 bp | GAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTaGGTCAGCCTCAAACACATCTCCAACTCTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEDVSHLSSGAH*VSLKHISNSEG Trigger: CCCTTCAGAGTTGGAGATGTGTTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGTCTTCTCCACTCTGCTaGTCACTCCAAGAGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: EINTVNCGKRPAKPGLGPSSPLC*SLQEEH Trigger: ATGTTCCTCTTGGAGTGATCAGCAGAGTGGAGAAGA...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAAACAACACAGGGACTCTaGCTTTCGCTCGAAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKTTQGL*LSLERL Trigger: CAGCCTTTCGAGCGAAAGGCAGAGTCCCTGTGTTGT...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGCACAATGGCCTTAATTaGTTCTCCTGGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EINTVNCGKRPAKPGLGPHNGLN*FSWEKW Trigger: CCACTTTTCCCAGGAGAATCAATTAAGGCCATTGTG...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAACAGGGTCCCACTCACTaGTCCCATAAATGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKQGPTH*SHKWTD Trigger: ATCTGTCCATTTATGGGAGCAGTGAGTGGGACCCTG...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAATGGCCAGGTCCCCGAGCTGCTGGAAGACAATAGAGCAGCCGGATGGCATATCCACCACCCTTTaGCTTGTTGGTATCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISMARSPSCWKTIEQPDGISTTL*LVGISN Trigger: GTTGCTGATACCAACAAGGCAAAGGGTGGTGGATAT...GCCATCCGGCTGCTCTATTGTCTTCCAGCAGCTCGGGGACCTGGCCATTGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | ATATCAATGGCCAGGTCCCCGAGCTGCTGGAAGACAATAGAGCAGCCGGATGGCCAAGAATTATCCCCATaGCTCTGTGCACCAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISMARSPSCWKTIEQPDGQELSP*LCAPIF Trigger: GAAGATTGGTGCACAGAGCCATGGGGATAATTCTTG...GCCATCCGGCTGCTCTATTGTCTTCCAGCAGCTCGGGGACCTGGCCATTGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | AATCTGGTTTCTCCCAAGCTACCTGTACAAGACACAGGTGGTTCACAGGGTGAGCGGTCAGCATCTGCATaGTTGTCATCACCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLVSPKLPVQDTGGSQGERSASA*LSSPWP Trigger: GGGCCATGGTGATGACAACCATGCAGATGCTGACCG...CTCACCCTGTGAACCACCTGTGTCTTGTACAGGTAGCTTGGGAGAAACCAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCCTGAAGAAATATAGGTaGTCGGTCAGCATCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RPTNAELLPEPSVYLRQGLKKYR*SVSICM Trigger: CATGCAGATGCTGACCGATCACCTATATTTCTTCAG...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGACTGAAGAAATATAGGTaGTCGGTCAGCATCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRLKKYR*SVSICM Trigger: CATGCAGATGCTGACCGATCACCTATATTTCTTCAG...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGGGTTCCTCATATCCTTaGACACAATCTCTATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EINTVNCGKRPAKPGLGPGSSYP*TQSLYH Trigger: GTGGTATAGAGATTGTGTGCAAGGATATGAGGAACC...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGTTTCGCTGTTCTTCCTaGTTATATGCAAGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EINTVNCGKRPAKPGLGPFRCSS*LYASLR Trigger: CCTGAGACTTGCATATAAGCAGGAAGAACAGCGAAA...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAATATCCACCACCCTTTaGCTTGTTGGTATCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRISTTL*LVGISN Trigger: GTTGCTGATACCAACAAGGCAAAGGGTGGTGGATAT...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCGTGTCCCATCCACATTaGATAGCCAATGTGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPTNAELLPEPSVYLRQGVSHPH*IANVTH Trigger: ATGAGTCACATTGGCTATCCAATGTGGATGGGACAC...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGACTGAACCTGAAATCTaGCTAGAAATTGTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EINTVNCGKRPAKPGLGPTEPEI*LEIVAA Trigger: AGCTGCTACAATTTCTAGTCAGATTTCAGGTTCAGT...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCAAAGGCTGCCACTTTTaGAAGGTCATCATCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPTNAELLPEPSVYLRQGKGCHF*KVIIFH Trigger: GTGAAAGATGATGACCTTTCAAAAGTGGCAGCCTTT...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTATACATCCTGCTCTTTaGTTCGCTGTTGTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPIHPAL*FAVVHS Trigger: ACTGTGAACAACAGCGAATCAAAGAGCAGGATGTAT...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTGGTTCCTCATATCCTTaGACACAATCTCTATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPGSSYP*TQSLYH Trigger: GTGGTATAGAGATTGTGTGCAAGGATATGAGGAACC...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTTTTCGCTGTTCTTCCTaGTTATATGCAAGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPFRCSS*LYASLR Trigger: CCTGAGACTTGCATATAAGCAGGAAGAACAGCGAAA...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCGCAACGTGTAATTGTTaGCTGACTTTCTGGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPTNAELLPEPSVYLRQGATCNC*LTFWVN Trigger: ATTCACCCAGAAAGTCAGGCAACAATTACACGTTGC...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTTTAGGGGTGCTGCAGGCATGGCAGCTGGGAGGCCATGGCTTGAGCAGGGCATCCATTATTGTCTaGAGGTATTTCTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLGVLQAWQLGGHGLSRASIIV*RYFSSS Trigger: AGAAGATGAGAAATACCTGCAGACAATAATGGATGC...CCTGCTCAAGCCATGGCCTCCCAGCTGCCATGCCTGCAGCACCCCTAAAAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | GAGATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGGCTGTTGTTCACAGTTaGACAAAAAGGTCCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EINTVNCGKRPAKPGLGPAVVHS*TKRSQK Trigger: TTTTTGGGACCTTTTTGTGCAACTGTGAACAACAGC...CGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAACTGTGGTCTCATCCGTaGATTCCACCGTACATAATA | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKLWSHP*IPPYII Trigger: TATTATGTACGGTGGAATCCACGGATGAGACCACAG...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAAATGAATTGGCATCTGTaGTCTCATCCGTGGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKMNWHL*SHPWIP Trigger: TGGAATCCACGGATGAGACCACAGATGCCAATTCAT...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015358.8 |
||
| CDS-3UTR GCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCATCCCCATGGCTCTGTaGACCAATCTTCTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQAAIPMASLVLSKHYPVIPMAL*TNLLHS Trigger: AGAGTGGAGAAGATTGGTGCACAGAGCCATGGGGAT...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAAGCAACGTGTAATTGTTaGCTGACTTTCTGGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKATCNC*LTFWVN Trigger: ATTCACCCAGAAAGTCAGGCAACAATTACACGTTGC...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCACTGCTCCCATAAATaGACAGATATAAATGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPHCSHK*TDINDV Trigger: GACGTCATTTATATCTGTCCATTTATGGGAGCAGTG...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAACTTTTCTTTATAGTTaGATGCAAATAGCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRTFLYS*MQIAPA Trigger: GGCAGGTGCTATTTGCATTCAACTATAAAGAAAAGT...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCATTAAACTCAAATGCTaGAGGGAACTGTCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPTNAELLPEPSVYLRQGIKLKC*RELSCH Trigger: ATGACAAGACAGTTCCCTTCAGCATTTGAGTTTAAT...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAATTTCTCATCTTCTTTaGAGCGTTTATCATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRISHLL*SVYHWD Trigger: GTCCCAATGATAAACGCTGCAAAGAAGATGAGAAAT...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGAGCATCCATTATTGTCTaGAGGTATTTCTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: INTVNCGKRPAKPGLGPRASIIV*RYFSSS Trigger: AGAAGATGAGAAATACCTGCAGACAATAATGGATGC...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAACACTGCTCCCATAAATaGACAGATATAAATGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKHCSHK*TDINDV Trigger: GACGTCATTTATATCTGTCCATTTATGGGAGCAGTG...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCATCAAGGACGAAATGTaGGTCCCTTTCTACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPTNAELLPEPSVYLRQGIKDEM*VPFYIF Trigger: AAAAATGTAGAAAGGGACCCACATTTCGTCCTTGAT...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCCTTATATTCAGACACTaGATCATAAACTTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPTNAELLPEPSVYLRQGLIFRH*IINFPA Trigger: GGCTGGAAAGTTTATGATCCAGTGTCTGAATATAAG...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | TGCGCAAAAGGCAGCATGGACTCCGTTGGGAAAGAATTTCTCCTACAGCACAGTCACCCTTTGCCTTGTTaGTATCAGCAACGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CAKGSMDSVGKEFLLQHSHPLPC*YQQRCF Trigger: AAAACAGCGTTGCTGATACCAACAAGGCAAAGGGTG...ACTGTGCTGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTGCCTTTTGCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCACAGGAGTAGCTGAGTaGGTAGGTGAGGAGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTTGVAE*VGEEPL Trigger: GAGGGGCTCCTCACCTACCCACTCAGCTACTCCTGT...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTCAAAGAGATTCTGATGAATTaGCATTACCTGTGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEEDVSHLSSGAHLVSLKEILMN*HYLWSH Trigger: ATGAGACCACAGGTAATGCCAATTCATCAGAATCTC...TTTGAGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCGCATTGCCAGAGATGTaGGCTGGGATGTTCGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTALPEM*AGMFDP Trigger: GGGATCGAACATCCCAGCTCACATCTCTGGCAATGC...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTTTTGTATATACATCCTaGTCTTTGATTCGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPFVYTS*SLIRCC Trigger: ACAACAGCGAATCAAAGAGCAGGATGTATATACAAA...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | AATCTGGTTTCTCCCAAGCTACCTGTACAAGACACAGGTGGTTCACAGGGTGAGATCTTTCACACTAGTTaGCACAACAATGATGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVSPKLPVQDTGGSQGEIFHTS*HNNDGR Trigger: CCTGCCATCATTGTTGTGCCAACTAGTGTGAAAGAT...CTCACCCTGTGAACCACCTGTGTCTTGTACAGGTAGCTTGGGAGAAACCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACCATGGAAGAGCATGTTATGCTTTCAGACCCATAGAAATAAACCCATAACAGGAGTAGCTGAGTaGGTAGGTGAGGAGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKPWKSMLCFQTHRNKPITGVAE*VGEEPL Trigger: GAGGGGCTCCTCACCTACCCACTCAGCTACTCCTGT...TATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | TGCGCAAAAGGCAGCATGGACTCCGTTGGGAAAGAATTTCTCCTACAGCACAGTACTGAACCTGAAATCTaGCTAGAAATTGTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CAKGSMDSVGKEFLLQHSTEPEI*LEIVAA Trigger: AGCTGCTACAATTTCTAGTCAGATTTCAGGTTCAGT...ACTGTGCTGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTGCCTTTTGCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTAAAAGGCTGCCACTTTTaGAAGGTCATCATCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLKGCHF*KVIIFH Trigger: GTGAAAGATGATGACCTTTCAAAAGTGGCAGCCTTT...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACCATGGAAGAGCATGTTATGCTTTCAGACCCATAGAAATAAACCCATAGCCAGAGATGTGAGCTaGGATGTTCGATCCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKPWKSMLCFQTHRNKPIARDVS*DVRSHP Trigger: TGGGTGGGATCGAACATCCCAGCTCACATCTCTGGC...TATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCAAGTGTCTTCTGGGTGAATCCATaGCAACACAGGGACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLSKHYPVHSIFNSSSVFWVNP*QHRDSA Trigger: GGCAGAGTCCCTGTGTTGTCATGGATTCACCCAGAA...GACACTTGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAACCATGGAAGAGCATGTTATGCTTTCAGACCCATAGAAATAAACCCATAACAACACAGGGACTCTaGCTTTCGCTCGAAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKPWKSMLCFQTHRNKPITTQGL*LSLERL Trigger: CAGCCTTTCGAGCGAAAGGCAGAGTCCCTGTGTTGT...TATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCAATCAGCAATTCTCACTaGCCCAGCAAGGAGAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVLSKHYPVHSIFNSSISNSH*PSKENP Trigger: CGGGTTCTCCTTGCTGGGGCAGTGAGAATTGCTGAT...TGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCACACCATTCAACATGTaGCCCTGTAGGACTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTTPFNM*PCRTVK Trigger: CTTGACAGTCCTACAGGGTCACATGTTGAATGGTGT...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTAGAAAAGCATGCTTGTTaGGGTTTTCAAATATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLEKHAC*GFQISQ Trigger: TTGGGATATTTGAAAACCTCAACAAGCATGCTTTTC...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCACTTTTCTTTATAGTTaGATGCAAATAGCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQAAIPMASLVLSKHYPVTFLYS*MQIAPA Trigger: GGCAGGTGCTATTTGCATTCAACTATAAAGAAAAGT...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CAACAAGCAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCGAAAGAGGAAAAGCATaGTTGTTGAGGTTTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QQAAIPMASLVLSKHYPVERGKA*LLRFSN Trigger: ATTTGAAAACCTCAACAAGCATGCTTTTCCTCTTTC...GACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTGCTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | AACTCACAGCTTCTCCTACCTCAGATATGGCAGTTTATCCATCTACAAATAAGGCAAGAATTATCCCCATaGCTCTGTGCACCAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSQLLLPQIWQFIHLQIRQELSP*LCAPIF Trigger: GAAGATTGGTGCACAGAGCCATGGGGATAATTCTTG...CCTTATTTGTAGATGGATAAACTGCCATATCTGAGGTAGGAGAAGCTGTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | TGTATGAAGATAACTGATAACTGTAGAACAGGTGGCAATGGTTCATTTGCCACAATAGCACCTGCCCATTaGAAAGAGGAAAAGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CMKITDNCRTGGNGSFATIAPAH*KEEKHA Trigger: AGCATGCTTTTCCTCTTTCCAATGGGCAGGTGCTAT...TGTGGCAAATGAACCATTGCCACCTGTTCTACAGTTATCAGTTATCTTCATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | AACTCACAGCTTCTCCTACCTCAGATATGGCAGTTTATCCATCTACAAATAAGGATCTTTCACACTAGTTaGCACAACAATGATGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSQLLLPQIWQFIHLQIRIFHTS*HNNDGR Trigger: CCTGCCATCATTGTTGTGCCAACTAGTGTGAAAGAT...CCTTATTTGTAGATGGATAAACTGCCATATCTGAGGTAGGAGAAGCTGTGAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCAAGTGTCCACCCTTTGCCTTGTTaGTATCAGCAACGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLSKHYPVHSIFNSSSVHPLPC*YQQRCF Trigger: AAAACAGCGTTGCTGATACCAACAAGGCAAAGGGTG...GACACTTGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACCATGGAAGAGCATGTTATGCTTTCAGACCCATAGAAATAAACCCATAGTGTCCCATCCACATTaGATAGCCAATGTGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKPWKSMLCFQTHRNKPIVSHPH*IANVTH Trigger: ATGAGTCACATTGGCTATCCAATGTGGATGGGACAC...TATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | TGTATGAAGATAACTGATAACTGTAGAACAGGTGGCAATGGTTCATTTGCCACACTGTGGTCTCATCCGTaGATTCCACCGTACATAATA | + |
|
Preference number: 4 (lower is better) Translates to: CMKITDNCRTGGNGSFATLWSHP*IPPYII Trigger: TATTATGTACGGTGGAATCCACGGATGAGACCACAG...TGTGGCAAATGAACCATTGCCACCTGTTCTACAGTTATCAGTTATCTTCATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTACACCATTCAACATGTaGCCCTGTAGGACTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTTPFNM*PCRTVK Trigger: CTTGACAGTCCTACAGGGTCACATGTTGAATGGTGT...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCGCTGTTGTTCACAGTTaGACAAAAAGGTCCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTAVVHS*TKRSQK Trigger: TTTTTGGGACCTTTTTGTGCAACTGTGAACAACAGC...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTATAGCACCTGCCCATTaGAAAGAGGAAAAGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTIAPAH*KEEKHA Trigger: AGCATGCTTTTCCTCTTTCCAATGGGCAGGTGCTAT...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCCTTATATTCAGACACTaGATCATAAACTTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTLIFRH*IINFPA Trigger: GGCTGGAAAGTTTATGATCCAGTGTCTGAATATAAG...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCAGATAGTAAGTTTATGTaGCTGTGCATTAGCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLVLSKHYPVHSIFNSSDSKFM*LCISIH Trigger: ATGGATGCTAATGCACAGTCACATAAACTTACTATC...TGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS-3UTR TCA 90 bp | TGTATGAAGATAACTGATAACTGTAGAACAGGTGGCAATGGTTCATTTGCCACAATTAAACTCAAATGCTaGAGGGAACTGTCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CMKITDNCRTGGNGSFATIKLKC*RELSCH Trigger: ATGACAAGACAGTTCCCTTCAGCATTTGAGTTTAAT...TGTGGCAAATGAACCATTGCCACCTGTTCTACAGTTATCAGTTATCTTCATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR TCA 90 bp | TGTATGAAGATAACTGATAACTGTAGAACAGGTGGCAATGGTTCATTTGCCACATATATACATCCTCTTTaGTTCGCTGTTGTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CMKITDNCRTGGNGSFATYIHPL*FAVVHS Trigger: ACTGTGAACAACAGCGAATCAAAGAGGATGTATATA...TGTGGCAAATGAACCATTGCCACCTGTTCTACAGTTATCAGTTATCTTCATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015358.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAACCATGGAAGAGCATGTTATGCTTTCAGACCCATAGAAATAAACCCATAATTTCTCATCTTCTTTaGAGCGTTTATCATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKPWKSMLCFQTHRNKPIISHLL*SVYHWD Trigger: GTCCCAATGATAAACGCTGCAAAGAAGATGAGAAAT...TATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| 3UTR CAA 72 bp | TACCTTATATGTACACAGCAGTACATATTGTACCAGTaGAACAGGACTTCTTGTATGAAGATAACTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLICTQQYILYQ*NRTSCMKITDN Trigger: GTTATCAGTTATCTTCATACAAGAAGTCCTGTTCAACTGGTACAATATGTACTGCTGTGTACATATAAGGTA 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTGAAAGAGGAAAAGCATaGTTGTTGAGGTTTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTERGKA*LLRFSN Trigger: ATTTGAAAACCTCAACAAGCATGCTTTTCCTCTTTC...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS GCA 90 bp | CCCCTCTCAGAGGAAGATGAGATGGTCCGGGTGGCCATCTCCCGCTaGAAGTCCTCCACACGCTTCTGCAGCTCAGCCTTGATAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLSEEDEMVRVAISR*KSSTRFCSSALIAS Trigger: GCTGGCTATCAAGGCTGAGCTGCAGAAGCGTGTGGAGGACTTGCAGCGGGAGATGGCCACCCGGACCATCTCATCTTCCTCTGAGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGGCCAGGTCCCCGAGCTGCTGGAAGACAATAGAGCAGCCGGATGGCCGCTGTTGTTCACAGTaGCACAAAAAGGTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ISMARSPSCWKTIEQPDGRCCSQ*HKKVPK Trigger: TTTTGGGACCTTTTTGTGCAACTGTGAACAACAGCG...GCCATCCGGCTGCTCTATTGTCTTCCAGCAGCTCGGGGACCTGGCCATTGATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGGCCAGGTCCCCGAGCTGCTGGAAGACAATAGAGCAGCCGGATGGCGAAAGGCTGCCACTTTaGAAAGGTCATCATCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISMARSPSCWKTIEQPDGERLPL*KGHHLS Trigger: TGAAAGATGATGACCTTTCAAAAGTGGCAGCCTTTC...GCCATCCGGCTGCTCTATTGTCTTCCAGCAGCTCGGGGACCTGGCCATTGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | ATCAACACTGTTAACTGTGGAAAGAGGCCTGCCAAGCCAGGGCTGGGTCCGAGATATACATCCTGCTCTTaGATTCGCTGTTGTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: INTVNCGKRPAKPGLGPRYTSCS*IRCCSQ Trigger: CTGTGAACAACAGCGAATCAAAGAGCAGGATGTATA...TCTCGGACCCAGCCCTGGCTTGGCAGGCCTCTTTCCACAGTTAACAGTGTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114601.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCGAGCCTTGTAATCTCTaGACACATTTTCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPTNAELLPEPSVYLRQGEPCNL*THFLMS Trigger: TGACATCAGAAAATGTGTCAAGAGATTACAAGGCTC...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCAACAAATGCAGAGTTGCTGCCTGAGCCCTCAGTTTACCTGCGACAAGGCGGAAAAGCATGCTTGTaGAGGTTTTCAAATATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPTNAELLPEPSVYLRQGGKACL*RFSNIP Trigger: TGGGATATTTGAAAACCTCAACAAGCATGCTTTTCC...GCCTTGTCGCAGGTAAACTGAGGGCTCAGGCAGCAACTCTGCATTTGTTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS TCA 90 bp | ACTAGAAATTGTAGCAGCTATAAGCTGTTTACACCATTCAACATGTaGCCCTGTAGGACTGTCAAGGGTCTCAATGCTGGGGTGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRNCSSYKLFTPFNM*PCRTVKGLNAGVPG Trigger: TCCCGGCACCCCAGCATTGAGACCCTTGACAGTCCTACAGGGTCACATGTTGAATGGTGTAAACAGCTTATAGCTGCTACAATTTCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000132837.5 ENSMUST00000146213.8 |
||
| CDS TCA 90 bp | AAGAATTATCCCCATGGCTCTGTGCACCAATCTTCTCCACTCTGCTaGTCACTCCAAGAGGAACATCAAGGACGAAATGTGGGTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNYPHGSVHQSSPLC*SLQEEHQGRNVGPF Trigger: AAAGGGACCCACATTTCGTCCTTGATGTTCCTCTTGGAGTGATCAGCAGAGTGGAGAAGATTGGTGCACAGAGCCATGGGGATAATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000132837.5 ENSMUST00000146213.8 |
||
| CDS-3UTR CAA 90 bp | CTGACAAGAGGAAGATGTGAGCCATCTGTCCTCAGGGGCTCACTTGGTCAGCCTTATTTCTCATCTTCTTaGCAGCGTTTATCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTRGRCEPSVLRGSLGQPYFSSS*QRLSLG Trigger: TCCCAATGATAAACGCTGCAAAGAAGATGAGAAATA...AGGCTGACCAAGTGAGCCCCTGAGGACAGATGGCTCACATCTTCCTCTTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | AATCTGGTTTCTCCCAAGCTACCTGTACAAGACACAGGTGGTTCACAGGGTGAGCTGAAGGGAACTGTCTaGTCATCTGCCAAACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: NLVSPKLPVQDTGGSQGELKGTV*SSAKHN Trigger: ATTGTGTTTGGCAGATGACAAGACAGTTCCCTTCAG...CTCACCCTGTGAACCACCTGTGTCTTGTACAGGTAGCTTGGGAGAAACCAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGGTTTCTCCCAAGCTACCTGTACAAGACACAGGTGGTTCACAGGGTGAGGCTCTTTGATTCGCTGTaGTTCACAGTTGCACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IWFLPSYLYKTQVVHRVRLFDSL*FTVAQK Trigger: TTTTTGTGCAACTGTGAACAACAGCGAATCAAAGAG...CCTCACCCTGTGAACCACCTGTGTCTTGTACAGGTAGCTTGGGAGAAACCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS CCA 90 bp | CTCATATCCTTGCACACAATCTCTATACCACAAGAATTATCCCCATaGCTCTGTGCACCAATCTTCTCCACTCTGCTGATCACTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LISLHTISIPQELSP*LCAPIFSTLLITPR Trigger: TCTTGGAGTGATCAGCAGAGTGGAGAAGATTGGTGCACAGAGCCATGGGGATAATTCTTGTGGTATAGAGATTGTGTGCAAGGATATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000132837.5 |
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| CDS-3UTR CAA 90 bp | AATCTGGTTTCTCCCAAGCTACCTGTACAAGACACAGGTGGTTCACAGGGTGAGGGAAAAGCATGCTTGTaGAGGTTTTCAAATATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLVSPKLPVQDTGGSQGEGKACL*RFSNIP Trigger: TGGGATATTTGAAAACCTCAACAAGCATGCTTTTCC...CTCACCCTGTGAACCACCTGTGTCTTGTACAGGTAGCTTGGGAGAAACCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS-3UTR CAA 90 bp | TGCGCAAAAGGCAGCATGGACTCCGTTGGGAAAGAATTTCTCCTACAGCACAGTAATGTGACTCATCAATaGAAGGATACACAATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CAKGSMDSVGKEFLLQHSNVTHQ*KDTQSP Trigger: AGGAGATTGTGTATCCTTCAATTGATGAGTCACATT...ACTGTGCTGTAGGAGAAATTCTTTCCCAACGGAGTCCATGCTGCCTTTTGCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS-3UTR CAA 90 bp | GGAAAACCATGGAAGAGCATGTTATGCTTTCAGACCCATAGAAATAAACCCATATTCTGCAGCTCAGCCTaGATAGCCAGCAGTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKPWKSMLCFQTHRNKPIFCSSA*IASSSL Trigger: CAAGGAACTGCTGGCTATCAAGGCTGAGCTGCAGAA...TATGGGTTTATTTCTATGGGTCTGAAAGCATAACATGCTCTTCCATGGTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS-3UTR CAA 90 bp | GCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTATCTTCAATAGTTCATTCTGCAGCTCAGCCTaGATAGCCAGCAGTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLVLSKHYPVHSIFNSSFCSSA*IASSSL Trigger: CAAGGAACTGCTGGCTATCAAGGCTGAGCTGCAGAA...TGAACTATTGAAGATAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS-3UTR CAA 90 bp | CAGCCATCCCCATGGCTTCTCTGGTTCTGTCAAAACATTATCCAGTCCACTCTAAATGTGACTCATCAATaGAAGGATACACAATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPSPWLLWFCQNIIQSTLNVTHQ*KDTQSP Trigger: AGGAGATTGTGTATCCTTCAATTGATGAGTCACATT...TAGAGTGGACTGGATAATGTTTTGACAGAACCAGAGAAGCCATGGGGATGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS GCA 90 bp | TTTGAAGTACATTTTAAAGTCCGTCACTGTCAGGGTCCCACTCACTaGTCCCATAAATGGACAGATATAAATGACGTCTTTCACAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: FEVHFKVRHCQGPTH*SHKWTDINDVFHNG Trigger: GCCATTGTGAAAGACGTCATTTATATCTGTCCATTTATGGGAGCAGTGAGTGGGACCCTGACAGTGACGGACTTTAAAATGTACTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000130909.8 ENSMUST00000132837.5 ENSMUST00000146213.8 ENSMUST00000149323.8 ENSMUST00000156756.3 |
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| CDS-3UTR CAA 90 bp | AACTCACAGCTTCTCCTACCTCAGATATGGCAGTTTATCCATCTACAAATAAGGCTGAAGGGAACTGTCTaGTCATCTGCCAAACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: NSQLLLPQIWQFIHLQIRLKGTV*SSAKHN Trigger: ATTGTGTTTGGCAGATGACAAGACAGTTCCCTTCAG...CCTTATTTGTAGATGGATAAACTGCCATATCTGAGGTAGGAGAAGCTGTGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS-3UTR CAA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCCGCTGTTGTTCACAGTaGCACAAAAAGGTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTRCCSQ*HKKVPK Trigger: TTTTGGGACCTTTTTGTGCAACTGTGAACAACAGCG...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCGAGCCTTGTAATCTCTaGACACATTTTCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTEPCNL*THFLMS Trigger: TGACATCAGAAAATGTGTCAAGAGATTACAAGGCTC...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS TCA 90 bp | ATCAGCAACGCTGTTTTGTCTGGCATCAAAGATAGTAAGTTTATGTaGCTGTGCATTAGCATCCATTATTGTCTGCAGGTATTTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ISNAVLSGIKDSKFM*LCISIHYCLQVFLI Trigger: GATGAGAAATACCTGCAGACAATAATGGATGCTAATGCACAGTCACATAAACTTACTATCTTTGATGCCAGACAAAACAGCGTTGCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS-3UTR CAA 90 bp | CACAGGCTGTTCACACAAAAGAAGTACTTGTTAATAATAGGAGCTTTCACCACCTATTTCTCATCTTCTTaGCAGCGTTTATCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HRLFTQKKYLLIIGAFTTYFSSS*QRLSLG Trigger: TCCCAATGATAAACGCTGCAAAGAAGATGAGAAATA...GGTGGTGAAAGCTCCTATTATTAACAAGTACTTCTTTTGTGTGAACAGCCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTCTCTTTGATTCGCTGTaGTTCACAGTTGCACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTLFDSL*FTVAQK Trigger: TTTTTGTGCAACTGTGAACAACAGCGAATCAAAGAG...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTTACATGTTGGAATACAGTGCTTCAGATGAGGCAAATACAGTATTGTACTGTATATACATCCTCTTaGATTCGCTGTTGTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVTCWNTVLQMRQIQYCTVYTSS*IRCCSQ Trigger: CTGTGAACAACAGCGAATCAAAGAGGATGTATATAC...AGTACAATACTGTATTTGCCTCATCTGAAGCACTGTATTCCAACATGTAACTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015358.8 |
||
| CDS GCA 72 bp | GAGGAAGATGAGATGGTCCGGGTGGCCATCTCCCGCTaGAAGTCCTCCACACGCTTCTGCAGCTCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EEDEMVRVAISR*KSSTRFCSSAL Trigger: CAAGGCTGAGCTGCAGAAGCGTGTGGAGGACTTGCAGCGGGAGATGGCCACCCGGACCATCTCATCTTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS CCA 72 bp | AGGAGCCCCTCTCAGAGGAAGATGAGATGGTCCGGGTaGCCATCTCCCGCTGCAAGTCCTCCACACGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSPSQRKMRWSG*PSPAASPPHAS Trigger: AGAAGCGTGTGGAGGACTTGCAGCGGGAGATGGCCACCCGGACCATCTCATCTTCCTCTGAGAGGGGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS TCA 72 bp | CCCCATGGCTCTGTGCACCAATCTTCTCCACTCTGCTaGTCACTCCAAGAGGAACATCAAGGACGAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PHGSVHQSSPLC*SLQEEHQGRNV Trigger: CACATTTCGTCCTTGATGTTCCTCTTGGAGTGATCAGCAGAGTGGAGAAGATTGGTGCACAGAGCCATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000130909.8 ENSMUST00000132837.5 ENSMUST00000146213.8 ENSMUST00000149323.8 ENSMUST00000156756.3 |
||
| CDS TCA 72 bp | TGTAGCAGCTATAAGCTGTTTACACCATTCAACATGTaGCCCTGTAGGACTGTCAAGGGTCTCAATGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSSYKLFTPFNM*PCRTVKGLNAG Trigger: CCCAGCATTGAGACCCTTGACAGTCCTACAGGGTCACATGTTGAATGGTGTAAACAGCTTATAGCTGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000132837.5 ENSMUST00000146213.8 |
||
| CDS CCA 72 bp | TTGCACACAATCTCTATACCACAAGAATTATCCCCATaGCTCTGTGCACCAATCTTCTCCACTCTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LHTISIPQELSP*LCAPIFSTLLI Trigger: GATCAGCAGAGTGGAGAAGATTGGTGCACAGAGCCATGGGGATAATTCTTGTGGTATAGAGATTGTGTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000132837.5 |
||
| CDS CAA 90 bp | TGTGCATTAGCATCCATTATTGTCTGCAGGTATTTCTCATCTTCTTaGCAGCGTTTATCATTGGGACCCACTAATGGCTGGCTGCAACGT | + |
|
Preference number: 6 (lower is better) Translates to: CALASIIVCRYFSSS*QRLSLGPTNGWLQR Trigger: ACGTTGCAGCCAGCCATTAGTGGGTCCCAATGATAAACGCTGCAAAGAAGATGAGAAATACCTGCAGACAATAATGGATGCTAATGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS CAA 90 bp | GCAAGGAGAACCCGTATATATTCCAGCCAATGTGTCCCATCCACATaGGATAGCCAATGTGACTCATCAATTGAAGGATACACAATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARRTRIYSSQCVPST*DSQCDSSIEGYTIS Trigger: GGAGATTGTGTATCCTTCAATTGATGAGTCACATTGGCTATCCAATGTGGATGGGACACATTGGCTGGAATATATACGGGTTCTCCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
||
| CDS CCA 72 bp | CCCGTATATATTCCAGCCAATGTGTCCCATCCACATTaGATAGCCAATGTGACTCATCAATTGAAGGATACA | + |
|
Preference number: 6 (lower is better) Translates to: PVYIPANVSHPH*IANVTHQLKDT Trigger: TGTATCCTTCAATTGATGAGTCACATTGGCTATCCAATGTGGATGGGACACATTGGCTGGAATATATACGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS CCA 72 bp | GAGATTCTGATGAATTGGCATCTGTGGTCTCATCCGTaGATTCCACCGTACATAATAATTTACCCACAATTC | + |
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Preference number: 6 (lower is better) Translates to: EILMNWHLWSHP*IPPYIIIYPQF Trigger: GAATTGTGGGTAAATTATTATGTACGGTGGAATCCACGGATGAGACCACAGATGCCAATTCATCAGAATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015358.8 |
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| CDS TCA 72 bp | ACAGATATAAATGACGTCTTTCACAATGGCCTTAATTaGTTCTCCTGGGAAAAGTGGAGCTTCTTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: TDINDVFHNGLN*FSWEKWSFFHL Trigger: CAGATGGAAGAAGCTCCACTTTTCCCAGGAGAATCAATTAAGGCCATTGTGAAAGACGTCATTTATATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000130909.8 ENSMUST00000132837.5 ENSMUST00000146213.8 ENSMUST00000149323.8 ENSMUST00000156756.3 |
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| CDS GCA 72 bp | AAATATCCCAAGTTTTCGCTGTTCTTCCTGCTTATATaGAAGTCTCAGGTTCCTCATATCCTTGCACACAAT | + |
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Preference number: 6 (lower is better) Translates to: KYPKFSLFFLLI*KSQVPHILAHN Trigger: ATTGTGTGCAAGGATATGAGGAACCTGAGACTTGCATATAAGCAGGAAGAACAGCGAAAACTTGGGATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 ENSMUST00000132837.5 |
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| CDS CCA 72 bp | ATTCTGATGAATTGGCATTACCTGTGGTCTCATCCGTaGATTCCACCGTACATAATAATTTACCCACAATTC | + |
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Preference number: 6 (lower is better) Translates to: ILMNWHYLWSHP*IPPYIIIYPQF Trigger: GAATTGTGGGTAAATTATTATGTACGGTGGAATCCACGGATGAGACCACAGGTAATGCCAATTCATCAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114601.8 |
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| CDS TCA 72 bp | GCTGTTTTGTCTGGCATCAAAGATAGTAAGTTTATGTaGCTGTGCATTAGCATCCATTATTGTCTGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: AVLSGIKDSKFM*LCISIHYCLQV Trigger: TACCTGCAGACAATAATGGATGCTAATGCACAGTCACATAAACTTACTATCTTTGATGCCAGACAAAACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015358.8 ENSMUST00000114601.8 |
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| CDS CAA 72 bp | AGTATTTGTATATACATCCTGCTCTTTGATTCGCTGTaGTTCACAGTTGCACAAAAAGGTCCCAAAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SICIYILLFDSL*FTVAQKGPKKT Trigger: TGTCTTTTTGGGACCTTTTTGTGCAACTGTGAACAACAGCGAATCAAAGAGCAGGATGTATATACAAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114601.8 |
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| CDS CAA 72 bp | TATAGTATTTGTATATACATCCTCTTTGATTCGCTGTaGTTCACAGTTGCACAAAAAGGTCCCAAAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: YSICIYILFDSL*FTVAQKGPKKT Trigger: TGTCTTTTTGGGACCTTTTTGTGCAACTGTGAACAACAGCGAATCAAAGAGGATGTATATACAAATACTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015358.8 |
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