Pregenerated sensors for MTM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031337Ensembl transcript IDs: ENSMUST00000025391.11, ENSMUST00000033700.12, ENSMUST00000061970.12, ENSMUST00000101501.10, ENSMUST00000114617.2, ENSMUST00000114621.8, ENSMUST00000171933.8
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTaGCTAGAGGCATGTTTGCGAACATATTCCTCTAAGCAGCAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: IHSRRCPYTSADKAN*LEACLRTYSSKQQK Trigger: CTTCTGCTGCTTAGAGGAATATGTTCGCAAACATGCCTCTAGTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR TCA 90 bp | AATAAAAATTGGCAATTATTTAAACGCCTTGCTCTTGGAATTTGCTaGAGAAGCAGAGTGCAATTTGGCTTTGGCAGTAATACCCATCTT | + |
|
Preference number: 1 (lower is better) Translates to: NKNWQLFKRLALGIC*RSRVQFGFGSNTHL Trigger: AAGATGGGTATTACTGCCAAAGCCAAATTGCACTCTGCTTCTTCAGCAAATTCCAAGAGCAAGGCGTTTAAATAATTGCCAATTTTTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTCCAGAACCCCCTCTTaGCTCCTTCCTTATGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: QQKPASSSHSAIYGFPSTSRTPS*LLPYDC Trigger: GCAATCATAAGGAAGGAGTCAAGAGGGGGTTCTGGA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTCCAGAACCCCCTCTTaGCTCCTTCCTTATGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: RTYSSKQQKPASSSHSAISRTPS*LLPYDC Trigger: GCAATCATAAGGAAGGAGTCAAGAGGGGGTTCTGGA...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGCTGAAGAAGCAGAGTaGAATTTGGCTTTGGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QQKPASSSHSAIYGFPSTAEEAE*NLALAV Trigger: TACTGCCAAAGCCAAATTGCACTCTGCTTCTTCAGC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGCTGAAGAAGCAGAGTaGAATTTGGCTTTGGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDAEEAE*NLALAV Trigger: TACTGCCAAAGCCAAATTGCACTCTGCTTCTTCAGC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTCCAGAACCCCCTCTTaGCTCCTTCCTTATGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: YTWGITVKKDALAIAHPFSRTPS*LLPYDC Trigger: GCAATCATAAGGAAGGAGTCAAGAGGGGGTTCTGGA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACAAAATGTGCTTCTCTTaGAAAATGATGGGAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDKMCFS*KMMGEP Trigger: AGGTTCTCCCATCATTTTTCAAGAGAAGCACATTTT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTAAAATGTGCTTCTCTTaGAAAATGATGGGAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: RTYSSKQQKPASSSHSAIKMCFS*KMMGEP Trigger: AGGTTCTCCCATCATTTTTCAAGAGAAGCACATTTT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCACTGTTATAAGCAGCTaGAGGAAAATACATTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QQKPASSSHSAIYGFPSTTVISS*RKIHFA Trigger: TGCAAAATGTATTTTCCTCCAGCTGCTTATAACAGT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCGCTGAAGAAGCAGAGTaGAATTTGGCTTTGGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: RIHLGHYCKERCSSHSSSAEEAE*NLALAV Trigger: TACTGCCAAAGCCAAATTGCACTCTGCTTCTTCAGC...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR GCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGCTGAAGAAGCAGAGTaGAATTTGGCTTTGGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: YTWGITVKKDALAIAHPFAEEAE*NLALAV Trigger: TACTGCCAAAGCCAAATTGCACTCTGCTTCTTCAGC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCCAGAACCCCCTCTTaGCTCCTTCCTTATGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: KQRDINRIHLGHYCKERCSRTPS*LLPYDC Trigger: GCAATCATAAGGAAGGAGTCAAGAGGGGGTTCTGGA...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCATCCATTCAAGGCGGTaGCCCTACACTTCAGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KQRDINRIHLGHYCKERCIHSRR*PYTSAD Trigger: ATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGAT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCGCACAGTGCTATTTATaGGTTTCCTTCAACCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RIHLGHYCKERCSSHSSSAQCYL*VSFNLS Trigger: ACTCAGGTTGAAGGAAACCCATAAATAGCACTGTGC...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGCACAGTGCTATTTATaGGTTTCCTTCAACCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: YTWGITVKKDALAIAHPFAQCYL*VSFNLS Trigger: ACTCAGGTTGAAGGAAACCCATAAATAGCACTGTGC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCAAAATGTGCTTCTCTTaGAAAATGATGGGAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: YTWGITVKKDALAIAHPFKMCFS*KMMGEP Trigger: AGGTTCTCCCATCATTTTTCAAGAGAAGCACATTTT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCAAAATGTGCTTCTCTTaGAAAATGATGGGAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: RIHLGHYCKERCSSHSSSKMCFS*KMMGEP Trigger: AGGTTCTCCCATCATTTTTCAAGAGAAGCACATTTT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCGCTGAAGAAGCAGAGTaGAATTTGGCTTTGGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KQRDINRIHLGHYCKERCAEEAE*NLALAV Trigger: TACTGCCAAAGCCAAATTGCACTCTGCTTCTTCAGC...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCGCTCTTGGAATTTGCTaGAGAAGCAGAGTGCAATTT | + |
|
Preference number: 2 (lower is better) Translates to: KQRDINRIHLGHYCKERCALGIC*RSRVQF Trigger: AAATTGCACTCTGCTTCTTCAGCAAATTCCAAGAGC...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCACTGTTATAAGCAGCTaGAGGAAAATACATTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RIHLGHYCKERCSSHSSSTVISS*RKIHFA Trigger: TGCAAAATGTATTTTCCTCCAGCTGCTTATAACAGT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCAAAATGTGCTTCTCTTaGAAAATGATGGGAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: KQRDINRIHLGHYCKERCKMCFS*KMMGEP Trigger: AGGTTCTCCCATCATTTTTCAAGAGAAGCACATTTT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCACTGTTATAAGCAGCTaGAGGAAAATACATTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KQRDINRIHLGHYCKERCTVISS*RKIHFA Trigger: TGCAAAATGTATTTTCCTCCAGCTGCTTATAACAGT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGAGTGCAATTTGGCTTaGGCAGTAATACCCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QQKPASSSHSAIYGFPSTECNLA*AVIPIF Trigger: AAAGATGGGTATTACTGCCAAAGCCAAATTGCACTC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGAGTGCAATTTGGCTTaGGCAGTAATACCCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDECNLA*AVIPIF Trigger: AAAGATGGGTATTACTGCCAAAGCCAAATTGCACTC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR GCA 72 bp | AACAGAATACACCTGGGGCATTACTGTAAAGAAAGATaGTCTAGCCATAGCTCATCCATTCAAGGCGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NRIHLGHYCKER*SSHSSSIQGGA Trigger: GGCACCGCCTTGAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCGAAGCAGAGTGCAATTaGGCTTTGGCAGTAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: RIHLGHYCKERCSSHSSSEAECN*ALAVIP Trigger: GGGTATTACTGCCAAAGCCAAATTGCACTCTGCTTC...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGAAGCAGAGTGCAATTaGGCTTTGGCAGTAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: YTWGITVKKDALAIAHPFEAECN*ALAVIP Trigger: GGGTATTACTGCCAAAGCCAAATTGCACTCTGCTTC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR TCA 72 bp | AGGATTTTCCAGAACCCCCTCTTGACTCCTTCCTTATaGTTGCCACACGGACACCATCGATTTCTTGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: RIFQNPLLTPSL*LPHGHHRFLVI Trigger: TATCACAAGAAATCGATGGTGTCCGTGTGGCAATCATAAGGAAGGAGTCAAGAGGGGGTTCTGGAAAATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGAGTGCAATTTGGCTTaGGCAGTAATACCCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YTWGITVKKDALAIAHPFECNLA*AVIPIF Trigger: AAAGATGGGTATTACTGCCAAAGCCAAATTGCACTC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR TCA 72 bp | CCTTATGATTGCCACACGGACACCATCGATTTCTTGTaGTATGTATTACAGAAGGCACATACTCAAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PYDCHTDTIDFL*YVLQKAHTQKS Trigger: AGACTTTTGAGTATGTGCCTTCTGTAATACATATCACAAGAAATCGATGGTGTCCGTGTGGCAATCATAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR GCA 72 bp | GAAAAAGCAAATTGCCCAGTACTTCAAGTAATAATGTaGAGAGCAAGTTTTTATGCACGCACACCATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EKANCPVLQVIM*RASFYARTPFK Trigger: TTTAAATGGTGTGCGTGCATAAAAACTTGCTCTGCACATTATTACTTGAAGTACTGGGCAATTTGCTTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGCCAAGGATGTCAGCTaGGCGGTCCTGTCCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTAKDVS*AVLSHP Trigger: CGGATGGGACAGGACCGCTCAGCTGACATCCTTGGC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTGCCAAGGATGTCAGCTaGGCGGTCCTGTCCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIAKDVS*AVLSHP Trigger: CGGATGGGACAGGACCGCTCAGCTGACATCCTTGGC...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGCCAAGGATGTCAGCTaGGCGGTCCTGTCCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDAKDVS*AVLSHP Trigger: CGGATGGGACAGGACCGCTCAGCTGACATCCTTGGC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTGGGCTGTTGCTGCTTaGCCCTGGGATTCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTWAVAA*PWDSIG Trigger: TCCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACTGGGCTGTTGCTGCTTaGCCCTGGGATTCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDWAVAA*PWDSIG Trigger: TCCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCA...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTGGGCTGTTGCTGCTTaGCCCTGGGATTCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIWAVAA*PWDSIG Trigger: TCCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCA...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCATGGGGCACCATCTGTaGCGAACTGGAAGTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTMGHHL*RTGSRS Trigger: GCTTCGACTTCCAGTTCGTCACAGATGGTGCCCCAT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTGTCCCATCCGTCACTaGAGTGCACAAGTACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTCPIRH*SAQVPS Trigger: GCTCGGTACTTGTGCACTGCAGTGACGGATGGGACA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCACTGGGTTGGGCTGTTaGTGCTTGACCCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTTGLGC*CLTLGF Trigger: GAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGTAACGCTGCTCCACTaGGTTGGGCTGTTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTVTLLH*VGLLLL Trigger: AAGCAGCAACAGCCCAACCCAGTGGAGCAGCGTTAC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCATACCGACAAGAGGCTaGCTGCAGCGCATAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTIPTRG*LQRIMT Trigger: GGTCATTATGCGCTGCAGTCAGCCTCTTGTCGGTAT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTACCGAGCTCTTTCCTaGAGACACTTGGTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTYRALS*RHLVCH Trigger: GTGGCAGACCAAGTGTCTTCAGGAAAGAGCTCGGTA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACATGGGGCACCATCTGTaGCGAACTGGAAGTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDMGHHL*RTGSRS Trigger: GCTTCGACTTCCAGTTCGTCACAGATGGTGCCCCAT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACTGTCCCATCCGTCACTaGAGTGCACAAGTACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDCPIRH*SAQVPS Trigger: GCTCGGTACTTGTGCACTGCAGTGACGGATGGGACA...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACACTGGGTTGGGCTGTTaGTGCTTGACCCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDTGLGC*CLTLGF Trigger: GAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTACTGGGTTGGGCTGTTaGTGCTTGACCCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAITGLGC*CLTLGF Trigger: GAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTCCTCCAATGGTGATTaGGCAGGCCCTGCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTSSNGD*AGPAFY Trigger: ATAGAAGGCAGGGCCTGCCCAATCACCATTGGAGGA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTGTAACGCTGCTCCACTaGGTTGGGCTGTTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIVTLLH*VGLLLL Trigger: AAGCAGCAACAGCCCAACCCAGTGGAGCAGCGTTAC...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACATACCGACAAGAGGCTaGCTGCAGCGCATAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDIPTRG*LQRIMT Trigger: GGTCATTATGCGCTGCAGTCAGCCTCTTGTCGGTAT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACACTTGGTCTGCCACTTaGATGGCACCGGTCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDTWSAT*MAPVRT Trigger: TGTTCTGACCGGTGCCATTCAAGTGGCAGACCAAGT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTACTTGGTCTGCCACTTaGATGGCACCGGTCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAITWSAT*MAPVRT Trigger: TGTTCTGACCGGTGCCATTCAAGTGGCAGACCAAGT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCGCCAAGGATGTCAGCTaGGCGGTCCTGTCCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSAKDVS*AVLSHP Trigger: CGGATGGGACAGGACCGCTCAGCTGACATCCTTGGC...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGCCAAGGATGTCAGCTaGGCGGTCCTGTCCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFAKDVS*AVLSHP Trigger: CGGATGGGACAGGACCGCTCAGCTGACATCCTTGGC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCCTGCTGTGGCCTTCTTaGTTCAATGCAAACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTLLWPS*FNANLR Trigger: CCTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAG...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTCCTCCAATGGTGATTaGGCAGGCCCTGCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAISSNGD*AGPAFY Trigger: ATAGAAGGCAGGGCCTGCCCAATCACCATTGGAGGA...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTGTCCAACATCAGCATaGCCAAGGATGTCAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTCPTSA*PRMSAE Trigger: CTCAGCTGACATCCTTGGCCATGCTGATGTTGGACA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCCCAAGTGACGCATGCTaGCAACTGGATACAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTPSDAC*QLDTKP Trigger: GGGTTTTGTATCCAGTTGCCAGCATGCGTCACTTGG...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACCTGCTGTGGCCTTCTTaGTTCAATGCAAACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDLLWPS*FNANLR Trigger: CCTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAG...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCATATCCTCCTCCTGTTaGCTTGTTGGCGACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTISSSC*LVGDCI Trigger: AATGCAGTCGCCAACAAGGCAACAGGAGGAGGATAT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACCTCCTGTTGCCTTGTTaGCGACTGCATTTACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDLLLPC*RLHLHW Trigger: CCAGTGTAAATGCAGTCGCCAACAAGGCAACAGGAG...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACTGTCCAACATCAGCATaGCCAAGGATGTCAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDCPTSA*PRMSAE Trigger: CTCAGCTGACATCCTTGGCCATGCTGATGTTGGACA...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACCCAAGTGACGCATGCTaGCAACTGGATACAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDPSDAC*QLDTKP Trigger: GGGTTTTGTATCCAGTTGCCAGCATGCGTCACTTGG...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTCCAAGTGACGCATGCTaGCAACTGGATACAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIPSDAC*QLDTKP Trigger: GGGTTTTGTATCCAGTTGCCAGCATGCGTCACTTGG...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACCACTCACATCCTGACTaGCTCCATCTTGAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDHSHPD*LHLETL Trigger: AAGTGTCTCAAGATGGAGTCAGTCAGGATGTGAGTG...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTATATCCTCCTCCTGTTaGCTTGTTGGCGACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIISSSC*LVGDCI Trigger: AATGCAGTCGCCAACAAGGCAACAGGAGGAGGATAT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACATATCCTCCTCCTGTTaGCTTGTTGGCGACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDISSSC*LVGDCI Trigger: AATGCAGTCGCCAACAAGGCAACAGGAGGAGGATAT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGTTCCAAGTGACGCATaGTGGCAACTGGATACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTVPSDA*WQLDTK Trigger: TTTTGTATCCAGTTGCCAGCATGCGTCACTTGGAAC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCACGCATGCTGGCAACTaGATACAAAACCCGATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTTHAGN*IQNPID Trigger: ATCAATCGGGTTTTGTATCCAGTTGCCAGCATGCGT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCATTTTGTTTTCTGGGTaGATCCACGACAGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTILFSG*IHDSTG Trigger: TCCTGTACTGTCGTGGATTCACCCAGAAAACAAAAT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCATGGGGCACCATCTGTaGCGAACTGGAAGTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFMGHHL*RTGSRS Trigger: GCTTCGACTTCCAGTTCGTCACAGATGGTGCCCCAT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATGGGGCACCATCTGTaGCGAACTGGAAGTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSMGHHL*RTGSRS Trigger: GCTTCGACTTCCAGTTCGTCACAGATGGTGCCCCAT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGCCTTCTTGCTTCAATaGAAACCTCAGGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTAFLLQ*KPQVSQ Trigger: TTGAGAAACCTGAGGTTTGCATTGAAGCAAGAAGGC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCCAAACATATCTCTTCTaGTGTGGCCTTCTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTQTYLF*CGLLAS Trigger: TGAAGCAAGAAGGCCACAGCAGAAGAGATATGTTTG...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTGTCCCATCCGTCACTaGAGTGCACAAGTACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFCPIRH*SAQVPS Trigger: GCTCGGTACTTGTGCACTGCAGTGACGGATGGGACA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCTGTCCCATCCGTCACTaGAGTGCACAAGTACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSCPIRH*SAQVPS Trigger: GCTCGGTACTTGTGCACTGCAGTGACGGATGGGACA...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTGTTCCAAGTGACGCATaGTGGCAACTGGATACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIVPSDA*WQLDTK Trigger: TTTTGTATCCAGTTGCCAGCATGCGTCACTTGGAAC...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGTTCCAAGTGACGCATaGTGGCAACTGGATACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDVPSDA*WQLDTK Trigger: TTTTGTATCCAGTTGCCAGCATGCGTCACTTGGAAC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCACTGGGTTGGGCTGTTaGTGCTTGACCCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSTGLGC*CLTLGF Trigger: GAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCATATCTCTTCTGCTGTaGCCTTCTTGCTTCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTISLLL*PSCFNA Trigger: TGCATTGAAGCAAGAAGGCCACAGCAGAAGAGATAT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGACCATTTTGTTTTCTaGGTGAATCCACGACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTDHFVF*VNPRQY Trigger: GTACTGTCGTGGATTCACCCAGAAAACAAAATGGTC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACACGCATGCTGGCAACTaGATACAAAACCCGATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDTHAGN*IQNPID Trigger: ATCAATCGGGTTTTGTATCCAGTTGCCAGCATGCGT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTATTTTGTTTTCTGGGTaGATCCACGACAGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIILFSG*IHDSTG Trigger: TCCTGTACTGTCGTGGATTCACCCAGAAAACAAAAT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCATACCGACAAGAGGCTaGCTGCAGCGCATAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFIPTRG*LQRIMT Trigger: GGTCATTATGCGCTGCAGTCAGCCTCTTGTCGGTAT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATACCGACAAGAGGCTaGCTGCAGCGCATAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSIPTRG*LQRIMT Trigger: GGTCATTATGCGCTGCAGTCAGCCTCTTGTCGGTAT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCAAACTGGACAACCAATaGGATTCTTCTATGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTKLDNQ*DSSMLG Trigger: TCCCAACATAGAAGAATCTCATTGGTTGTCCAGTTT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCACTTGGTCTGCCACTTaGATGGCACCGGTCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFTWSAT*MAPVRT Trigger: TGTTCTGACCGGTGCCATTCAAGTGGCAGACCAAGT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTACCGAGCTCTTTCCTaGAGACACTTGGTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFYRALS*RHLVCH Trigger: GTGGCAGACCAAGTGTCTTCAGGAAAGAGCTCGGTA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTGAGCCGAGTCACAGTTaGATAAGAAAGTACCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIEPSHS*IRKYQI Trigger: GATTTGGTACTTTCTTATTCAACTGTGACTCGGCTC...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGAGCCGAGTCACAGTTaGATAAGAAAGTACCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDEPSHS*IRKYQI Trigger: GATTTGGTACTTTCTTATTCAACTGTGACTCGGCTC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTGCCTTCTTGCTTCAATaGAAACCTCAGGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIAFLLQ*KPQVSQ Trigger: TTGAGAAACCTGAGGTTTGCATTGAAGCAAGAAGGC...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTCAAACATATCTCTTCTaGTGTGGCCTTCTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIQTYLF*CGLLAS Trigger: TGAAGCAAGAAGGCCACAGCAGAAGAGATATGTTTG...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTATATCTCTTCTGCTGTaGCCTTCTTGCTTCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIISLLL*PSCFNA Trigger: TGCATTGAAGCAAGAAGGCCACAGCAGAAGAGATAT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCTCCTCCAATGGTGATTaGGCAGGCCCTGCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSSSNGD*AGPAFY Trigger: ATAGAAGGCAGGGCCTGCCCAATCACCATTGGAGGA...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTCCTCCAATGGTGATTaGGCAGGCCCTGCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFSSNGD*AGPAFY Trigger: ATAGAAGGCAGGGCCTGCCCAATCACCATTGGAGGA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTGACCATTTTGTTTTCTaGGTGAATCCACGACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIDHFVF*VNPRQY Trigger: GTACTGTCGTGGATTCACCCAGAAAACAAAATGGTC...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGACCATTTTGTTTTCTaGGTGAATCCACGACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDDHFVF*VNPRQY Trigger: GTACTGTCGTGGATTCACCCAGAAAACAAAATGGTC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGAAAGTTCTGAGTTTTaGTATGCGTCATCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTESSEF*YASSLS Trigger: TGAAAGTGATGACGCATATCAAAACTCAGAACTTTC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACAAACTGGACAACCAATaGGATTCTTCTATGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDKLDNQ*DSSMLG Trigger: TCCCAACATAGAAGAATCTCATTGGTTGTCCAGTTT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTATATGTTCTAACCAATaGGTAGACTCCAAACTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIICSNQ*VDSKLD Trigger: GTCCAGTTTGGAGTCTACTCATTGGTTAGAACATAT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCTGCTGTGGCCTTCTTaGTTCAATGCAAACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFLLWPS*FNANLR Trigger: CCTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCTCCTGTTGCCTTGTTaGCGACTGCATTTACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFLLLPC*RLHLHW Trigger: CCAGTGTAAATGCAGTCGCCAACAAGGCAACAGGAG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCCTCCTGTTGCCTTGTTaGCGACTGCATTTACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSLLLPC*RLHLHW Trigger: CCAGTGTAAATGCAGTCGCCAACAAGGCAACAGGAG...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTGTCCAACATCAGCATaGCCAAGGATGTCAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFCPTSA*PRMSAE Trigger: CTCAGCTGACATCCTTGGCCATGCTGATGTTGGACA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCTGTCCAACATCAGCATaGCCAAGGATGTCAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSCPTSA*PRMSAE Trigger: CTCAGCTGACATCCTTGGCCATGCTGATGTTGGACA...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCCACTCACATCCTGACTaGCTCCATCTTGAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSHSHPD*LHLETL Trigger: AAGTGTCTCAAGATGGAGTCAGTCAGGATGTGAGTG...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCACTCACATCCTGACTaGCTCCATCTTGAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFHSHPD*LHLETL Trigger: AAGTGTCTCAAGATGGAGTCAGTCAGGATGTGAGTG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTGAAAGTTCTGAGTTTTaGTATGCGTCATCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTYSSKQQKPASSSHSAIESSEF*YASSLS Trigger: TGAAAGTGATGACGCATATCAAAACTCAGAACTTTC...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGAAAGTTCTGAGTTTTaGTATGCGTCATCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDESSEF*YASSLS Trigger: TGAAAGTGATGACGCATATCAAAACTCAGAACTTTC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCATGGGGCACCATCTGTaGCGAACTGGAAGTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCMGHHL*RTGSRS Trigger: GCTTCGACTTCCAGTTCGTCACAGATGGTGCCCCAT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCATATCCTCCTCCTGTTaGCTTGTTGGCGACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFISSSC*LVGDCI Trigger: AATGCAGTCGCCAACAAGGCAACAGGAGGAGGATAT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCACTGGGTTGGGCTGTTaGTGCTTGACCCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCTGLGC*CLTLGF Trigger: GAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTCTATATTCTTCAACTaGATTATAAACAGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QQKPASSSHSAIYGFPSTSIFFN*IINSPP Trigger: GGGTGGACTGTTTATAATCCAGTTGAAGAATATAGA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCGTAACGCTGCTCCACTaGGTTGGGCTGTTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCVTLLH*VGLLLL Trigger: AAGCAGCAACAGCCCAACCCAGTGGAGCAGCGTTAC...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCATACCGACAAGAGGCTaGCTGCAGCGCATAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCIPTRG*LQRIMT Trigger: GGTCATTATGCGCTGCAGTCAGCCTCTTGTCGGTAT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCACTTGGTCTGCCACTTaGATGGCACCGGTCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCTWSAT*MAPVRT Trigger: TGTTCTGACCGGTGCCATTCAAGTGGCAGACCAAGT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTACCGAGCTCTTTCCTaGAGACACTTGGTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCYRALS*RHLVCH Trigger: GTGGCAGACCAAGTGTCTTCAGGAAAGAGCTCGGTA...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCGTTCCAAGTGACGCATaGTGGCAACTGGATACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSVPSDA*WQLDTK Trigger: TTTTGTATCCAGTTGCCAGCATGCGTCACTTGGAAC...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGTTCCAAGTGACGCATaGTGGCAACTGGATACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFVPSDA*WQLDTK Trigger: TTTTGTATCCAGTTGCCAGCATGCGTCACTTGGAAC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACTCTATATTCTTCAACTaGATTATAAACAGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDSIFFN*IINSPP Trigger: GGGTGGACTGTTTATAATCCAGTTGAAGAATATAGA...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCACGCATGCTGGCAACTaGATACAAAACCCGATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSTHAGN*IQNPID Trigger: ATCAATCGGGTTTTGTATCCAGTTGCCAGCATGCGT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCATTTTGTTTTCTGGGTaGATCCACGACAGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFILFSG*IHDSTG Trigger: TCCTGTACTGTCGTGGATTCACCCAGAAAACAAAAT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGAGCCGAGTCACAGTTaGATAAGAAAGTACCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFEPSHS*IRKYQI Trigger: GATTTGGTACTTTCTTATTCAACTGTGACTCGGCTC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCGAGCCGAGTCACAGTTaGATAAGAAAGTACCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSEPSHS*IRKYQI Trigger: GATTTGGTACTTTCTTATTCAACTGTGACTCGGCTC...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGCCTTCTTGCTTCAATaGAAACCTCAGGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFAFLLQ*KPQVSQ Trigger: TTGAGAAACCTGAGGTTTGCATTGAAGCAAGAAGGC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCCTGCTGTGGCCTTCTTaGTTCAATGCAAACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCLLWPS*FNANLR Trigger: CCTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAG...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTTTGTTGCTGCTGTGGCCTTCTTaGTTCAATGCAAACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVSFPSPPINESSPLCLLLLWPS*FNANLR Trigger: CCTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAG...CAACAAACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR GCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCCAAACATATCTCTTCTaGTGTGGCCTTCTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSQTYLF*CGLLAS Trigger: TGAAGCAAGAAGGCCACAGCAGAAGAGATATGTTTG...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCAAACATATCTCTTCTaGTGTGGCCTTCTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFQTYLF*CGLLAS Trigger: TGAAGCAAGAAGGCCACAGCAGAAGAGATATGTTTG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCATATCTCTTCTGCTGTaGCCTTCTTGCTTCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFISLLL*PSCFNA Trigger: TGCATTGAAGCAAGAAGGCCACAGCAGAAGAGATAT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATATCTCTTCTGCTGTaGCCTTCTTGCTTCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSISLLL*PSCFNA Trigger: TGCATTGAAGCAAGAAGGCCACAGCAGAAGAGATAT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGACCATTTTGTTTTCTaGGTGAATCCACGACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFDHFVF*VNPRQY Trigger: GTACTGTCGTGGATTCACCCAGAAAACAAAATGGTC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCCTCCTGTTGCCTTGTTaGCGACTGCATTTACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCLLLPC*RLHLHW Trigger: CCAGTGTAAATGCAGTCGCCAACAAGGCAACAGGAG...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCCACTCACATCCTGACTaGCTCCATCTTGAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCHSHPD*LHLETL Trigger: AAGTGTCTCAAGATGGAGTCAGTCAGGATGTGAGTG...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTTTGTTGCACTCACATCCTGACTaGCTCCATCTTGAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: MVSFPSPPINESSPLCLLHSHPD*LHLETL Trigger: AAGTGTCTCAAGATGGAGTCAGTCAGGATGTGAGTG...CAACAAACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR TCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCAAACTGGACAACCAATaGGATTCTTCTATGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFKLDNQ*DSSMLG Trigger: TCCCAACATAGAAGAATCTCATTGGTTGTCCAGTTT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCAAACTGGACAACCAATaGGATTCTTCTATGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSKLDNQ*DSSMLG Trigger: TCCCAACATAGAAGAATCTCATTGGTTGTCCAGTTT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATATGTTCTAACCAATaGGTAGACTCCAAACTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSICSNQ*VDSKLD Trigger: GTCCAGTTTGGAGTCTACTCATTGGTTAGAACATAT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCATATCCTCCTCCTGTTaGCTTGTTGGCGACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCISSSC*LVGDCI Trigger: AATGCAGTCGCCAACAAGGCAACAGGAGGAGGATAT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTTTGTTGGTTAGCCAGATTGTGTaGCAGAGGAAAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MVSFPSPPINESSPLCLLVSQIV*QRKGMF Trigger: AAACATGCCTTTCCTCTGGCACACAATCTGGCTAAC...CAACAAACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCATTTTGTTTTCTGGGTaGATCCACGACAGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCILFSG*IHDSTG Trigger: TCCTGTACTGTCGTGGATTCACCCAGAAAACAAAAT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCGCCTTCTTGCTTCAATaGAAACCTCAGGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCAFLLQ*KPQVSQ Trigger: TTGAGAAACCTGAGGTTTGCATTGAAGCAAGAAGGC...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTGCCTTCTTGCTTCAATaGAAACCTCAGGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: STMVSFPSPPINESSPLCAFLLQ*KPQVSQ Trigger: TTGAGAAACCTGAGGTTTGCATTGAAGCAAGAAGGC...ACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCATTGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTTTGTTGCAAACATATCTCTTCTaGTGTGGCCTTCTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MVSFPSPPINESSPLCLLQTYLF*CGLLAS Trigger: TGAAGCAAGAAGGCCACAGCAGAAGAGATATGTTTG...CAACAAACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR CCA 90 bp | TCAACAATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTATATCTCTTCTGCTGTaGCCTTCTTGCTTCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: STMVSFPSPPINESSPLCISLLL*PSCFNA Trigger: TGCATTGAAGCAAGAAGGCCACAGCAGAAGAGATAT...ACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCATTGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR CCA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCTCTATATTCTTCAACTaGATTATAAACAGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RIHLGHYCKERCSSHSSSSIFFN*IINSPP Trigger: GGGTGGACTGTTTATAATCCAGTTGAAGAATATAGA...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTCTATATTCTTCAACTaGATTATAAACAGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: YTWGITVKKDALAIAHPFSIFFN*IINSPP Trigger: GGGTGGACTGTTTATAATCCAGTTGAAGAATATAGA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCAAACTGGACAACCAATaGGATTCTTCTATGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCKLDNQ*DSSMLG Trigger: TCCCAACATAGAAGAATCTCATTGGTTGTCCAGTTT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCAGCTGTGGGGAAAGATaGAAATTTATGGCCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCSCGER*KFMAKT Trigger: AGTTTTGGCCATAAATTTGCATCTTTCCCCACAGCT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025391.11 ENSMUST00000114621.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCGAAAGTTCTGAGTTTTaGTATGCGTCATCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCESSEF*YASSLS Trigger: TGAAAGTGATGACGCATATCAAAACTCAGAACTTTC...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| 3UTR CAA 72 bp | TTGGAATTTGCTGAAGAAGCAGAGTGCAATTTGGCTTaGGCAGTAATACCCATCTTTCACATTTGGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEFAEEAECNLA*AVIPIFHIWIN Trigger: ATTAATCCAAATGTGAAAGATGGGTATTACTGCCAAAGCCAAATTGCACTCTGCTTCTTCAGCAAATTCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTATATTCTTCAACTaGATTATAAACAGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KQRDINRIHLGHYCKERCSIFFN*IINSPP Trigger: GGGTGGACTGTTTATAATCCAGTTGAAGAATATAGA...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCGGGGCATCAGCAAGCTaGGCGGAGTTGGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQKPASSSHSAIYGFPSTGASAS*AELASC Trigger: GCAGCTGGCCAACTCCGCCAAGCTTGCTGATGCCCC...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACGGGGCATCAGCAAGCTaGGCGGAGTTGGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDGASAS*AELASC Trigger: GCAGCTGGCCAACTCCGCCAAGCTTGCTGATGCCCC...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACCGCTGCTCCACTGGGTaGGGCTGTTGCTGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDRCSTG*GCCCLT Trigger: GGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCG...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTCGCTGCTCCACTGGGTaGGGCTGTTGCTGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RTYSSKQQKPASSSHSAIRCSTG*GCCCLT Trigger: GGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCG...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTTGGGCTGTTGCTGCTaGACCCTGGGATTCCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: QQKPASSSHSAIYGFPSTLGCCC*TLGFHR Trigger: CCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCAA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS TCA 90 bp | CCTGTCCCATCCGTCACTGCAGTGCACAAGTACCGAGCTCTTTCCTaGAGACACTTGGTCTGCCACTTGAATGGCACCGGTCAGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVPSVTAVHKYRALS*RHLVCHLNGTGQNK Trigger: CTTGTTCTGACCGGTGCCATTCAAGTGGCAGACCAAGTGTCTTCAGGAAAGAGCTCGGTACTTGTGCACTGCAGTGACGGATGGGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACTTGGGCTGTTGCTGCTaGACCCTGGGATTCCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDLGCCC*TLGFHR Trigger: CCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCAA...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CCA 90 bp | ATAATCGTCACGCAAGGCCAAAAGCTCCATGTAACGCTGCTCCACTaGGTTGGGCTGTTGCTGCTTGACCCTGGGATTCCATCGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: IIVTQGQKLHVTLLH*VGLLLLDPGIPSDV Trigger: TACATCCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCGTTACATGGAGCTTTTGGCCTTGCGTGACGATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCGGGGCATCAGCAAGCTaGGCGGAGTTGGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFGASAS*AELASC Trigger: GCAGCTGGCCAACTCCGCCAAGCTTGCTGATGCCCC...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCGGGGCATCAGCAAGCTaGGCGGAGTTGGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RIHLGHYCKERCSSHSSSGASAS*AELASC Trigger: GCAGCTGGCCAACTCCGCCAAGCTTGCTGATGCCCC...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCTCTGCTGTGGCCTTCTaGCTTCAATGCAAACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQKPASSSHSAIYGFPSTSAVAF*LQCKPQ Trigger: CTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAGA...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCCGCTGCTCCACTGGGTaGGGCTGTTGCTGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RIHLGHYCKERCSSHSSSRCSTG*GCCCLT Trigger: GGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCG...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCGCTGCTCCACTGGGTaGGGCTGTTGCTGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFRCSTG*GCCCLT Trigger: GGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTCTGCTGTGGCCTTCTaGCTTCAATGCAAACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTYSSKQQKPASSSHSAISAVAF*LQCKPQ Trigger: CTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAGA...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACTCTGCTGTGGCCTTCTaGCTTCAATGCAAACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDSAVAF*LQCKPQ Trigger: CTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAGA...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTTGGGCTGTTGCTGCTaGACCCTGGGATTCCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFLGCCC*TLGFHR Trigger: CCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCAA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCCACTGGGTTGGGCTGTaGCTGCTTGACCCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RIHLGHYCKERCSSHSSSHWVGL*LLDPGI Trigger: AATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGTG...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCACTGGGTTGGGCTGTaGCTGCTTGACCCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFHWVGL*LLDPGI Trigger: AATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGTG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCGGGGCATCAGCAAGCTaGGCGGAGTTGGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQRDINRIHLGHYCKERCGASAS*AELASC Trigger: GCAGCTGGCCAACTCCGCCAAGCTTGCTGATGCCCC...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS TCA 90 bp | CCGATTTCGGGATCTAAACGTTGCGATCCTCCTAAGATCATCATCTaGGGTCCGATAGGGAACCACCAAAAGAGCAGGGTATGTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PISGSKRCDPPKIII*GPIGNHQKSRVCLT Trigger: TGTGAGACATACCCTGCTCTTTTGGTGGTTCCCTATCGGACCTCAGATGATGATCTTAGGAGGATCGCAACGTTTAGATCCCGAAATCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCCGAGCCGAGTCACAGTaGAATAAGAAAGTACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QQKPASSSHSAIYGFPSTRAESQ*NKKVPN Trigger: ATTTGGTACTTTCTTATTCAACTGTGACTCGGCTCG...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CCA 90 bp | ACCGACAAGAGGCTGACTGCAGCGCATAATGACCATTTTGTTTTCTaGGTGAATCCACGACAGTACAGGAAGCCGATTTCGGGATCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDKRLTAAHNDHFVF*VNPRQYRKPISGSK Trigger: TTTAGATCCCGAAATCGGCTTCCTGTACTGTCGTGGATTCACCCAGAAAACAAAATGGTCATTATGCGCTGCAGTCAGCCTCTTGTCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACCTGACTGACTCCATCTaGAGACACTTTCTTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDLTDSI*RHFLNG Trigger: TCCATTAAGAAAGTGTCTCAAGATGGAGTCAGTCAG...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTCTGACTGACTCCATCTaGAGACACTTTCTTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RTYSSKQQKPASSSHSAILTDSI*RHFLNG Trigger: TCCATTAAGAAAGTGTCTCAAGATGGAGTCAGTCAG...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACCGAGCCGAGTCACAGTaGAATAAGAAAGTACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDRAESQ*NKKVPN Trigger: ATTTGGTACTTTCTTATTCAACTGTGACTCGGCTCG...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTCGAGCCGAGTCACAGTaGAATAAGAAAGTACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RTYSSKQQKPASSSHSAIRAESQ*NKKVPN Trigger: ATTTGGTACTTTCTTATTCAACTGTGACTCGGCTCG...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCTCTGCTGTGGCCTTCTaGCTTCAATGCAAACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFSAVAF*LQCKPQ Trigger: CTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAGA...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCTCTGCTGTGGCCTTCTaGCTTCAATGCAAACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RIHLGHYCKERCSSHSSSSAVAF*LQCKPQ Trigger: CTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAGA...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTTATGGGTTTCCTTCAACCAGCTTAGAAGTTTGTTaGTTAGTTTCCCTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: QQKPASSSHSAIYGFPSTSLEVC*LVSLIT Trigger: TGTGATCAGGGAAACTAACAAACAAACTTCTAAGCT...GGTTGAAGGAAACCCATAAATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCCACTGGGTTGGGCTGTaGCTGCTTGACCCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: KQRDINRIHLGHYCKERCHWVGL*LLDPGI Trigger: AATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGTG...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCATTCAAGGCGGTGCCCCTACACTTCAGCAGATAAGGCGAATTGACAGCTTAGAAGTTTGTTaGTTAGTTTCCCTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSIQGGAPTLQQIRRIDSLEVC*LVSLIT Trigger: TGTGATCAGGGAAACTAACAAACAAACTTCTAAGCT...GTCAATTCGCCTTATCTGCTGAAGTGTAGGGGCACCGCCTTGAATGGATGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CGAACATATTCCTCTAAGCAGCAGAAGCCAGCCAGCTCCTCGCACAGTGCTATTAGCTTAGAAGTTTGTTaGTTAGTTTCCCTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: RTYSSKQQKPASSSHSAISLEVC*LVSLIT Trigger: TGTGATCAGGGAAACTAACAAACAAACTTCTAAGCT...AATAGCACTGTGCGAGGAGCTGGCTGGCTTCTGCTGCTTAGAGGAATATGTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS GCA 90 bp | TCCTCCTCCTGTTGCCTTGTTGGCGACTGCATTTACACTGGGTCGTaGATCATAAATCATGAGCTTAGAAGTTTGTTTGTTAGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSCCLVGDCIYTGS*IINHELRSLFVSFP Trigger: AGGGAAACTAACAAACAAACTTCTAAGCTCATGATTTATGATGCACGACCCAGTGTAAATGCAGTCGCCAACAAGGCAACAGGAGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCTGACTGACTCCATCTaGAGACACTTTCTTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFLTDSI*RHFLNG Trigger: TCCATTAAGAAAGTGTCTCAAGATGGAGTCAGTCAG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTTTGTTGTCTGCTGTGGCCTTCTaGCTTCAATGCAAACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MVSFPSPPINESSPLCLLSAVAF*LQCKPQ Trigger: CTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAGA...CAACAAACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCATCAAAAAGCCTTCATaGAACTCAAAAGCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFIKKPS*NSKAVG Trigger: CCCCACAGCTTTTGAGTTCAATGAAGGCTTTTTGAT...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATCAAAAAGCCTTCATaGAACTCAAAAGCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RIHLGHYCKERCSSHSSSIKKPS*NSKAVG Trigger: CCCCACAGCTTTTGAGTTCAATGAAGGCTTTTTGAT...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCGAGCCGAGTCACAGTaGAATAAGAAAGTACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFRAESQ*NKKVPN Trigger: ATTTGGTACTTTCTTATTCAACTGTGACTCGGCTCG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCCGAGCCGAGTCACAGTaGAATAAGAAAGTACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RIHLGHYCKERCSSHSSSRAESQ*NKKVPN Trigger: ATTTGGTACTTTCTTATTCAACTGTGACTCGGCTCG...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AGAATACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCCATGAGCTTAGAAGTTaGTTTGTTAGTTTCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RIHLGHYCKERCSSHSSSHELRS*FVSFPD Trigger: ATCAGGGAAACTAACAAACAAACTTCTAAGCTCATG...GGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | TACACCTGGGGCATTACTGTAAAGAAAGATGCTCTAGCCATAGCTCATCCATTCCATGAGCTTAGAAGTTaGTTTGTTAGTTTCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YTWGITVKKDALAIAHPFHELRS*FVSFPD Trigger: ATCAGGGAAACTAACAAACAAACTTCTAAGCTCATG...GAATGGATGAGCTATGGCTAGAGCATCTTTCTTTACAGTAATGCCCCAGGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | CAACAATGGTATCTTTTCCTTCTCCCCCTATTAATGAGAGTTCACCTCTATGTTCTGACTGACTCCATCTaGAGACACTTTCTTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: QQWYLFLLPLLMRVHLYVLTDSI*RHFLNG Trigger: TCCATTAAGAAAGTGTCTCAAGATGGAGTCAGTCAG...AACATAGAGGTGAACTCTCATTAATAGGGGGAGAAGGAAAAGATACCATTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCCTGACTGACTCCATCTaGAGACACTTTCTTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: KQRDINRIHLGHYCKERCLTDSI*RHFLNG Trigger: TCCATTAAGAAAGTGTCTCAAGATGGAGTCAGTCAG...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCATCAAAAAGCCTTCATaGAACTCAAAAGCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KQRDINRIHLGHYCKERCIKKPS*NSKAVG Trigger: CCCCACAGCTTTTGAGTTCAATGAAGGCTTTTTGAT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCAGCTTAGAAGTTTGTTaGTTAGTTTCCCTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: KQRDINRIHLGHYCKERCSLEVC*LVSLIT Trigger: TGTGATCAGGGAAACTAACAAACAAACTTCTAAGCT...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGAGACATAAACAGAATACACCTGGGGCATTACTGTAAAGAAAGATGCCATGAGCTTAGAAGTTaGTTTGTTAGTTTCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KQRDINRIHLGHYCKERCHELRS*FVSFPD Trigger: ATCAGGGAAACTAACAAACAAACTTCTAAGCTCATG...GCATCTTTCTTTACAGTAATGCCCCAGGTGTATTCTGTTTATGTCTCTCTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CCA 72 bp | AGTGCGTCTGCACATGGGGCACCATCTGTGACGAACTaGAAGTCGAAGCGGGGGCATCAGCAAGCTTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SASAHGAPSVTN*KSKRGHQQAWR Trigger: CCGCCAAGCTTGCTGATGCCCCCGCTTCGACTTCCAGTTCGTCACAGATGGTGCCCCATGTGCAGACGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CAA 72 bp | GACGAACTGGAAGTCGAAGCGGGGGCATCAGCAAGCTaGGCGGAGTTGGCCAGCTGCAATTCCTCGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DELEVEAGASAS*AELASCNSSSL Trigger: GAGGCTCGAGGAATTGCAGCTGGCCAACTCCGCCAAGCTTGCTGATGCCCCCGCTTCGACTTCCAGTTCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CCA 72 bp | ACGCAAGGCCAAAAGCTCCATGTAACGCTGCTCCACTaGGTTGGGCTGTTGCTGCTTGACCCTGGGATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TQGQKLHVTLLH*VGLLLLDPGIP Trigger: TGGAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCGTTACATGGAGCTTTTGGCCTTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS TCA 72 bp | TCCGTCACTGCAGTGCACAAGTACCGAGCTCTTTCCTaGAGACACTTGGTCTGCCACTTGAATGGCACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SVTAVHKYRALS*RHLVCHLNGTG Trigger: ACCGGTGCCATTCAAGTGGCAGACCAAGTGTCTTCAGGAAAGAGCTCGGTACTTGTGCACTGCAGTGACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS TCA 72 bp | TGTAACGCTGCTCCACTGGGTTGGGCTGTTGCTGCTTaGCCCTGGGATTCCATCGGATGTAATAATTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: CNAAPLGWAVAA*PWDSIGCNNSP Trigger: GGGTGAATTATTACATCCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CAA 72 bp | AAGCTCCATGTAACGCTGCTCCACTGGGTTGGGCTGTaGCTGCTTGACCCTGGGATTCCATCGGATGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: KLHVTLLHWVGL*LLDPGIPSDVI Trigger: TATTACATCCGATGGAATCCCAGGGTCAAGCAGCAACAGCCCAACCCAGTGGAGCAGCGTTACATGGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS TCA 72 bp | GGATCTAAACGTTGCGATCCTCCTAAGATCATCATCTaGGGTCCGATAGGGAACCACCAAAAGAGCAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSKRCDPPKIII*GPIGNHQKSRV Trigger: TACCCTGCTCTTTTGGTGGTTCCCTATCGGACCTCAGATGATGATCTTAGGAGGATCGCAACGTTTAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS TCA 72 bp | ACCGAGCTCTTTCCTGAAGACACTTGGTCTGCCACTTaGATGGCACCGGTCAGAACAAGCTTGATATGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TELFPEDTWSAT*MAPVRTSLICS Trigger: AGAACATATCAAGCTTGTTCTGACCGGTGCCATTCAAGTGGCAGACCAAGTGTCTTCAGGAAAGAGCTCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CCA 72 bp | AGGCTGACTGCAGCGCATAATGACCATTTTGTTTTCTaGGTGAATCCACGACAGTACAGGAAGCCGATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLTAAHNDHFVF*VNPRQYRKPIS Trigger: CGAAATCGGCTTCCTGTACTGTCGTGGATTCACCCAGAAAACAAAATGGTCATTATGCGCTGCAGTCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CAA 72 bp | CGAGGTAACAGGATCATGAGTTTCAGGTTAGCCAGATaGTGTGCCAGAGGAAAGGCATGTTTTACAAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RGNRIMSFRLAR*CARGKACFTRI Trigger: GATCCTTGTAAAACATGCCTTTCCTCTGGCACACAATCTGGCTAACCTGAAACTCATGATCCTGTTACCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101501.10 |
||
| CDS CAA 72 bp | AGGGACAGTCTCACTCACATCCTGACTGACTCCATCTaGAGACACTTTCTTAATGGATTCATTCTCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RDSLTHILTDSI*RHFLNGFILQG Trigger: TCCTTGGAGAATGAATCCATTAAGAAAGTGTCTCAAGATGGAGTCAGTCAGGATGTGAGTGAGACTGTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000101501.10 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS GCA 72 bp | TGTTGCCTTGTTGGCGACTGCATTTACACTGGGTCGTaGATCATAAATCATGAGCTTAGAAGTTTGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CCLVGDCIYTGS*IINHELRSLFV Trigger: AACAAACAAACTTCTAAGCTCATGATTTATGATGCACGACCCAGTGTAAATGCAGTCGCCAACAAGGCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CAA 90 bp | TGCATTTACACTGGGTCGTGCATCATAAATCATGAGCTTAGAAGTTaGTTTGTTAGTTTCCCTGATCACATCCAGGTATTTCTCGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CIYTGSCIINHELRS*FVSFPDHIQVFLVI Trigger: GATGACGAGAAATACCTGGATGTGATCAGGGAAACTAACAAACAAACTTCTAAGCTCATGATTTATGATGCACGACCCAGTGTAAATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS GCA 72 bp | AGGATCTCAAACATATCTCTTCTGCTGTGGCCTTCTTaGTTCAATGCAAACCTCAGGTTTCTCAAATCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RISNISLLLWPS*FNANLRFLKSL Trigger: TAAAGATTTGAGAAACCTGAGGTTTGCATTGAAGCAAGAAGGCCACAGCAGAAGAGATATGTTTGAGATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000101501.10 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS CAA 72 bp | TCTGTAAGTTTCTGTCTTTCTCGAGCCGAGTCACAGTaGAATAAGAAAGTACCAAATCGACAGCTATACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVSFCLSRAESQ*NKKVPNRQLYR Trigger: TCTGTATAGCTGTCGATTTGGTACTTTCTTATTCAACTGTGACTCGGCTCGAGAAAGACAGAAACTTACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||
| CDS TCA 72 bp | GGAGATCGATCAGCATCAGCATGGTTTTTATCACCATaGCCTATTCTAGATGCAAATTTATGGCCAAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: GDRSASAWFLSP*PILDANLWPKL Trigger: AAGTTTTGGCCATAAATTTGCATCTAGAATAGGTCATGGTGATAAAAACCATGCTGATGCTGATCGATCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000171933.8 |
||
| CDS TCA 72 bp | TTGAATAAGAAAGTACCAAATCGACAGCTATACAGATaGTCCAAAACGGTAATCAAAAAGCCTTCATTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LNKKVPNRQLYR*SKTVIKKPSLN Trigger: GTTCAATGAAGGCTTTTTGATTACCGTTTTGGATCATCTGTATAGCTGTCGATTTGGTACTTTCTTATTCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025391.11 ENSMUST00000033700.12 ENSMUST00000061970.12 ENSMUST00000114617.2 ENSMUST00000114621.8 ENSMUST00000171933.8 |
||