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Pregenerated sensors for MTLN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051319

Ensembl transcript IDs: ENSMUST00000135091.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAGCTGAAAGTAAGTTGTTAGAGAAGACAAAACTATTTTCTTTCTaGAGCAAGCCATGTTCTTGCAAGCCGTGCAAGGACGACTCCTGG +
Preference number: 1 (lower is better)
Translates to: QAESKLLEKTKLFSF*SKPCSCKPCKDDSW
Trigger: CCAGGAGTCGTCCTTGCACGGCTTGCAAGAACATGGCTTGCTTCAGAAAGAAAATAGTTTTGTCTTCTCTAACAACTTACTTTCAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR TCA 90 bp AGAAAGTCTCTGCTTTCAGGCTCCAAATCTCTTACTGCAGCAAACTaGATGGTAGGCAAAAATACTGCTTTCTTTTGTGAGGAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: RKSLLSGSKSLTAAN*MVGKNTAFFCEEEK
Trigger: TTTTTCCTCCTCACAAAAGAAAGCAGTATTTTTGCCTACCATTCAGTTTGCTGCAGTAAGAGATTTGGAGCCTGAAAGCAGAGACTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR CAA 90 bp CAAGGACGACTCCTGGGTCGCGCGGCTCCCACGATCCGGGCTGCGTaGGGCTTAGGGAGTGAGAACCCGGCGGACTCGGGCTGCAGCGCG +
Preference number: 2 (lower is better)
Translates to: QGRLLGRAAPTIRAA*GLGSENPADSGCSA
Trigger: CGCGCTGCAGCCCGAGTCCGCCGGGTTCTCACTCCCTAAGCCCAACGCAGCCCGGATCGTGGGAGCCGCGCGACCCAGGAGTCGTCCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR CAA 90 bp GTTAGAGAAGACAAAACTATTTTCTTTCTGAAGCAAGCCATGTTCTaGCAAGCCGTGCAAGGACGACTCCTGGGTCGCGCGGCTCCCACG +
Preference number: 2 (lower is better)
Translates to: VREDKTIFFLKQAMF*QAVQGRLLGRAAPT
Trigger: CGTGGGAGCCGCGCGACCCAGGAGTCGTCCTTGCACGGCTTGCAAGAACATGGCTTGCTTCAGAAAGAAAATAGTTTTGTCTTCTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR-3UTR GCA 90 bp AGGCATTTGACACAGCTCCTAGGTTTTCTGAATATGTCTAGAAAAATGACTCATCCATCAGAAAGTCTCTaGTTTCAGGCTCCAAATCTC +
Preference number: 2 (lower is better)
Translates to: RHLTQLLGFLNMSRKMTHPSESL*FQAPNL
Trigger: GAGATTTGGAGCCTGAAAGCAGAGACTTTCTGATGG...ATGAGTCATTTTTCTAGACATATTCAGAAAACCTAGGAGCTGTGTCAAATGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR GCA 72 bp AGGCTGTACCAAGGTGAGATTCCATCAGAAAGTCTCTaGTTTCAGGCTCCAAATCTCTTACTGCAGCAAACT +
Preference number: 3 (lower is better)
Translates to: RLYQGEIPSESL*FQAPNLLLQQT
Trigger: AGTTTGCTGCAGTAAGAGATTTGGAGCCTGAAAGCAGAGACTTTCTGATGGAATCTCACCTTGGTACAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR GCA 72 bp CAGAAAGTCTCTGCTTTCAGGCTCCAAATCTCTTACTaGAGCAAACTGAATGGTAGGCAAAAATACTGCTTT +
Preference number: 3 (lower is better)
Translates to: QKVSAFRLQISY*SKLNGRQKYCF
Trigger: AAAGCAGTATTTTTGCCTACCATTCAGTTTGCTGCAGTAAGAGATTTGGAGCCTGAAAGCAGAGACTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR CAA 72 bp GACAAAACTATTTTCTTTCTGAAGCAAGCCATGTTCTaGCAAGCCGTGCAAGGACGACTCCTGGGTCGCGCG +
Preference number: 4 (lower is better)
Translates to: DKTIFFLKQAMF*QAVQGRLLGRA
Trigger: CGCGCGACCCAGGAGTCGTCCTTGCACGGCTTGCAAGAACATGGCTTGCTTCAGAAAGAAAATAGTTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
CDS-3UTR GCA 90 bp CAGAAAGTCTCTGCTTTCAGGCTCCAAATCTCTTACTGCAGCAAACTGAATGGTACTAGCACGGACACCTaGAGCGTCCTCTCAGACACG +
Preference number: 4 (lower is better)
Translates to: QKVSAFRLQISYCSKLNGTSTDT*SVLSDT
Trigger: CGTGTCTGAGAGGACGCTGCAGGTGTCCGTGCTAGT...ACCATTCAGTTTGCTGCAGTAAGAGATTTGGAGCCTGAAAGCAGAGACTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
CDS-3UTR TCA 90 bp CAGAAAGTCTCTGCTTTCAGGCTCCAAATCTCTTACTGCAGCAAACTGAATGGTAGGTCCAGCTTTTTCTaGGTCGTTGCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QKVSAFRLQISYCSKLNGRSSFF*VVASLS
Trigger: GGACAAGCTGGCAACGACTCAGAAAAAGCTGGACCT...ACCATTCAGTTTGCTGCAGTAAGAGATTTGGAGCCTGAAAGCAGAGACTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
3UTR CAA 72 bp CTGAATATGTCTAGAAAAATGACTCATAATGGTCCGTaGATCAGATCTGCCTCCAGGCTGTACCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LNMSRKMTHNGP*IRSASRLYQGE
Trigger: CTCACCTTGGTACAGCCTGGAGGCAGATCTGATCAACGGACCATTATGAGTCATTTTTCTAGACATATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
CDS-3UTR GCA 90 bp CAGCTCCTAGGTTTTCTGAATATGTCTAGAAAAATGACTCATAATGGTCCGTTGCTTTTTCTGAGTCGTTaGCAGCTTGTCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QLLGFLNMSRKMTHNGPLLFLSR*QLVLQP
Trigger: AGGCTGCAGGACAAGCTGGCAACGACTCAGAAAAAG...CAACGGACCATTATGAGTCATTTTTCTAGACATATTCAGAAAACCTAGGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
CDS-3UTR CAA 90 bp ACCAAGGTGAGATTCCATCAGAAAGTCTCTGCTTTCAGGCTCCAAATCTCTTACCCGCAGCCGATTCGCTaGCCAGCCCAGGACCACTCC +
Preference number: 5 (lower is better)
Translates to: TKVRFHQKVSAFRLQISYPQPIR*PAQDHS
Trigger: GGAGTGGTCCTGGGCTGGCAAGCGAATCGGCTGCGG...GTAAGAGATTTGGAGCCTGAAAGCAGAGACTTTCTGATGGAATCTCACCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2
CDS-3UTR CAA 90 bp GGTGAGATTCCATCAGAAAGTCTCTGCTTTCAGGCTCCAAATCTCTTACTGCAGGCTTTTTCTGAGTCGTaGCCAGCTTGTCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GEIPSESLCFQAPNLLLQAFSES*PACPAA
Trigger: GGCTGCAGGACAAGCTGGCAACGACTCAGAAAAAGC...CTGCAGTAAGAGATTTGGAGCCTGAAAGCAGAGACTTTCTGATGGAATCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135091.2