Pregenerated sensors for MTIF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020459Ensembl transcript IDs: ENSMUST00000020749.13, ENSMUST00000093239.11, ENSMUST00000132783.3, ENSMUST00000133452.8, ENSMUST00000136351.8, ENSMUST00000144321.8
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCAGATCTCTCCACACTaGGGAAGCCGGTGCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVQISPH*GSRCKP Trigger: GGGTTTGCACCGGCTTCCTCAGTGTGGAGAGATCTG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGACACAACAATGTCGGTaGCCTGAGCTCCTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVTQQCR*PELLWL Trigger: GAGCCAGAGGAGCTCAGGTCACCGACATTGTTGTGT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGACAATGTCGGTGACCTaGGCTCCTCTGGCTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVTMSVT*APLALI Trigger: AATGAGAGCCAGAGGAGCTCAGGTCACCGACATTGT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTCCCTTTTGTGCAGCTaGCTGCTGAATAGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVSLLCS*LLNSTA Trigger: GGCAGTGCTATTCAGCAGTCAGCTGCACAAAAGGGA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTTCCACTGGACCGGTaGGATCTGCTTTCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLPLDR*DLLSVP Trigger: TGGAACTGAAAGCAGATCCCACCGGTCCAGTGGAAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAAAGCACCAATGTGTTaGGTGATGCCTCCGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVKAPMC*VMPPTS Trigger: GGAAGTCGGAGGCATCACTCAACACATTGGTGCTTT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTTTCCAGTGCAGACTaGCATACTTCTCACGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLSSAD*HTSHGL Trigger: AAGCCCGTGAGAAGTATGGCAGTCTGCACTGGAAAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGGAGTCTTCTTTGACTTaGGCTGTGCACCTGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVESSLT*AVHLPT Trigger: TGTAGGCAGGTGCACAGCCCAAGTCAAAGAAGACTC...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCCAGAAGGTTCAAGATaGCCTCCACAGACCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVPEGSR*PPQTHQ Trigger: TTGATGGGTCTGTGGAGGCCATCTTGAACCTTCTGG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAGAAGCCTCACCTATTaGGTACTCCTCCAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVRSLTY*VLLQCV Trigger: CACACACTGGAGGAGTACCCAATAGGTGAGGCTTCT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGGTGCTGATGCAAAGCTaGACCAATGAGCATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVVLMQS*TNEHVC Trigger: ACAGACATGCTCATTGGTTCAGCTTTGCATCAGCAC...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTGCGAGAGCAATTGTTaGTTCTGCCAAAGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVCESNC*FCQSHQ Trigger: CTGATGGCTTTGGCAGAAGCAACAATTGCTCTCGCA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTGGACCGGTGGGATCTaGTTTCAGTTCCAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVWTGGI*FQFQDF Trigger: GAAATCTTGGAACTGAAAGCAGATCCCACCGGTCCA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTGTGGGGCAATCTGCTaGTTAGTTCCTCCTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVCGAIC*LVPPAN Trigger: ATTTGCAGGAGGAACTAAGCAGCAGATTGCCCCACA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAACTTCACGGGCCCTTaGCTCAGATTCTACTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVNFTGP*LRFYFK Trigger: CTTGAAGTAGAATCTGAGCCAAGGGCCCGTGAAGTT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTTCCGATGCGCTTCTTaGTGTTCCCTTCGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVFRCAS*CSLRFS Trigger: AGAAAAGCGAAGGGAACACCAAGAAGCGCATCGGAA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGACAAGAAGTCTGTGCTaGTGCAAAGCTGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVTRSLC*CKAEPM Trigger: CATTGGTTCAGCTTTGCATCAGCACAGACTTCTTGT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAAGGTCGTTTTCCCATaGTCAACATGGCCCATTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVKVVFP*STWPIT Trigger: TGTAATGGGCCATGTTGATCATGGGAAAACGACCTT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCATTACCCCATCATCTaGAGCTACAACCAACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVHYPII*SYNQHN Trigger: GTTGTGTTGGTTGTAGCTGCAGATGATGGGGTAATG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGGATCTCTCTTTCCAGTaGAGACTGCCATACTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVDLSFQ*RLPYFS Trigger: TGAGAAGTATGGCAGTCTGCACTGGAAAGAGAGATC...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGGTCCCTTTTGAACTCTaGAGCCAGCAACAGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVVPFEL*SQQQEF Trigger: AAATTCCTGTTGCTGGCTGCAGAGTTCAAAAGGGAC...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAGCAATTGTTGCTTCTaGCAAAGCCATCAGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVSNCCF*QSHQVI Trigger: GATAACCTGATGGCTTTGGCAGAAGCAACAATTGCT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCAGTTCCAAGATTTCTaGGAGAGCAATTGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVQFQDF*ESNCCF Trigger: GAAGCAACAATTGCTCTCGCAGAAATCTTGGAACTG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTGAATAGCACTGCCTaGCTCCACATTAAAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLNSTA*LHIKTI Trigger: TATGGTTTTAATGTGGAGGCAGGCAGTGCTATTCAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTTTACTGGAGACAACTaGGATCTTGGTGGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVFTGDN*DLGGLF Trigger: AAAAAGACCACCAAGATCTCAGTTGTCTCCAGTAAA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTCTTCCTTTGTCTGTaGAAGACTCTATTACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLFLCL*KTLLLF Trigger: GAACAGTAATAGAGTCTTTCACAGACAAAGGAAGAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAACTTCTGCATCTTTTaGATGCTGAATGGATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVNFCIF*MLNGFH Trigger: GTGGAATCCATTCAGCATGCAAAAGATGCAGAAGTT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTGCTTAGTTCCTCCTaGAAATCTTCAATAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLLSSS*KSSIRW Trigger: CCATCTTATTGAAGATTTGCAGGAGGAACTAAGCAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTATATCTTTTGCCATaGCACTGGCTAGATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLYLLP*HWLDLQ Trigger: TTGAAGATCTAGCCAGTGCCATGGCAAAAGATATAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAAGGAACTTTATATATaGTCTCTCTTTCCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVKELYI*SLFPVQ Trigger: CTGCACTGGAAAGAGAGATCATATATAAAGTTCCTT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGGTCGCACTTATTGATTaGAAGGATAATAGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVVALID*KDNRNF Trigger: GAAGTTCCTATTATCCTTGCAATCAATAAGTGCGAC...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCCTTTTTCTTCTTTTTaGTCAGACTTCCTCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVPFSSF*SDFLHS Trigger: TGAATGGAGGAAGTCTGAGCAAAAAGAAGAAAAAGG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTTTCTACCTTTTCTTTaGGCTTTAAGGGTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVFLPFL*ALRVSV Trigger: AACAGAGACCCTTAAAGCCCAAAGAAAAGGTAGAAA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR GCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGGATAATAGGAACTTCTaGATCTTTTGCATGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVDNRNF*IFCMLN Trigger: ATTCAGCATGCAAAAGATGCAGAAGTTCCTATTATC...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGATGAATCTACGTCAATaGCAGTGTTCAATAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKACTTTPGFPFTIFNVMNLRQ*QCSIKL Trigger: AAGCTTTATTGAACACTGCCATTGACGTAGATTCAT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTCCTCTGGCTCTCATaGCTGAGAAGGCAGCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLLWLS*LRRQHV Trigger: GACATGCTGCCTTCTCAGCAATGAGAGCCAGAGGAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAGAGTCTTCTTTGACTaGGGCTGTGCACCTGCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVRVFFD*GCAPAY Trigger: GTAGGCAGGTGCACAGCCCAAGTCAAAGAAGACTCT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTGCGAGAGCAATTGTaGCTTCTGCCAAAGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLREQL*LLPKPS Trigger: TGATGGCTTTGGCAGAAGCAACAATTGCTCTCGCAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGAAAAGCACCAATGTGTaGAGTGATGCCTCCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVKSTNV*SDASDF Trigger: GAAGTCGGAGGCATCACTCAACACATTGGTGCTTTT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGTTTCTGCGAGAGCAATaGTTGCTTCTGCCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVFLREQ*LLLPKP Trigger: TGGCTTTGGCAGAAGCAACAATTGCTCTCGCAGAAA...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGACAGGACCTCTTCCTTaGTCTGTGAAAGACTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVTGPLP*SVKDSI Trigger: AATAGAGTCTTTCACAGACAAAGGAAGAGGTCCTGT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGATATTAGTCGAACTTTaGCCCAACTCTTCCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVILVEL*PNSSQQ Trigger: TTGCTGGGAAGAGTTGGGCAAAAGTTCGACTAATAT...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGGCCTTTTTCTTCTTTTaGCTCAGACTTCCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVAFFFF*LRLPPF Trigger: GAATGGAGGAAGTCTGAGCAAAAAGAAGAAAAAGGC...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS-3UTR CAA 90 bp | GGATTAAAGGCGTGCACCACCACACCCGGCTTCCCATTTACCATTTTTAATGTGCTTTCTACCTTTTCTTaGGGCTTTAAGGGTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLKACTTTPGFPFTIFNVLSTFS*GFKGLC Trigger: ACAGAGACCCTTAAAGCCCAAAGAAAAGGTAGAAAG...CACATTAAAAATGGTAAATGGGAAGCCGGGTGTGGTGGTGCACGCCTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 |
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| CDS CCA 90 bp | TCAATAAAGCTTCGTATACACAATCTATATCTTTTGCCATGGCACTaGCTAGATCTTCAACAGTCATTCCAACCCATACTTCTACCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SIKLRIHNLYLLPWH*LDLQQSFQPILLPL Trigger: AAGAGGTAGAAGTATGGGTTGGAATGACTGTTGAAGATCTAGCCAGTGCCATGGCAAAAGATATAGATTGTGTATACGAAGCTTTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000133452.8 ENSMUST00000136351.8 ENSMUST00000144321.8 |
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| CDS TCA 72 bp | CTGCCAGGACCGGGCACCCAGCAGATCTCTCCACACTaGGGAAGCCGGTGCAAACCCATGTCTACACCATGC | + |
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Preference number: 6 (lower is better) Translates to: LPGPGTQQISPH*GSRCKPMSTPC Trigger: GCATGGTGTAGACATGGGTTTGCACCGGCTTCCTCAGTGTGGAGAGATCTGCTGGGTGCCCGGTCCTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000133452.8 ENSMUST00000136351.8 ENSMUST00000144321.8 |
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| CDS TCA 72 bp | TTACAAGAAGTCTGTGCTGATGCAAAGCTGAACCAATaGGCATGTCTGTCTGCCAGGACCGGGCACCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQEVCADAKLNQ*ACLSARTGHPA Trigger: TGCTGGGTGCCCGGTCCTGGCAGACAGACATGCTCATTGGTTCAGCTTTGCATCAGCACAGACTTCTTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000133452.8 ENSMUST00000136351.8 ENSMUST00000144321.8 |
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| CDS CAA 72 bp | CAGGTTATCGCCCGTAAGTGCAGAGACGTGCACTGCTaGAACATCACCACCATACTCTTCACACACCACATC | + |
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Preference number: 6 (lower is better) Translates to: QVIARKCRDVHC*NITTILFTHHI Trigger: GATGTGGTGTGTGAAGAGTATGGTGGTGATGTTCAAGCAGTGCACGTCTCTGCACTTACGGGCGATAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000132783.3 ENSMUST00000144321.8 |
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| CDS TCA 72 bp | CTTCTTTGTTACAAGAAGTCTGTGCTGATGCAAAGCTaGACCAATGAGCATGTCTGTCTGCCAGGACCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLCYKKSVLMQS*TNEHVCLPGPG Trigger: GCCCGGTCCTGGCAGACAGACATGCTCATTGGTTCAGCTTTGCATCAGCACAGACTTCTTGTAACAAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000133452.8 ENSMUST00000136351.8 ENSMUST00000144321.8 |
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| CDS GCA 72 bp | CAGTTCCAAGATTTCTGCGAGAGCAATTGTTGCTTCTaGCAAAGCCATCAGGTTATCGCCCGTAAGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QFQDFCESNCCF*QSHQVIARKCR Trigger: TCTGCACTTACGGGCGATAACCTGATGGCTTTGGCAGAAGCAACAATTGCTCTCGCAGAAATCTTGGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000132783.3 ENSMUST00000144321.8 |
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| CDS TCA 72 bp | GTTTCTCGAAGTTTGTCAAGTAAGGTCGTTTTCCCATaGTCAACATGGCCCATTACAGTAACAACTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: VSRSLSSKVVFP*STWPITVTTGD Trigger: GTCCCCAGTTGTTACTGTAATGGGCCATGTTGATCATGGGAAAACGACCTTACTTGACAAACTTCGAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000132783.3 ENSMUST00000144321.8 |
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| CDS CCA 72 bp | CTTCGTATACACAATCTATATCTTTTGCCATGGCACTaGCTAGATCTTCAACAGTCATTCCAACCCATACTT | + |
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Preference number: 6 (lower is better) Translates to: LRIHNLYLLPWH*LDLQQSFQPIL Trigger: AAGTATGGGTTGGAATGACTGTTGAAGATCTAGCCAGTGCCATGGCAAAAGATATAGATTGTGTATACGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000133452.8 ENSMUST00000136351.8 ENSMUST00000144321.8 |
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| CDS CCA 72 bp | ATAAAGCTTCGTATACACAATCTATATCTTTTGCCATaGCACTGGCTAGATCTTCAACAGTCATTCCAACCC | + |
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Preference number: 6 (lower is better) Translates to: IKLRIHNLYLLP*HWLDLQQSFQP Trigger: GGGTTGGAATGACTGTTGAAGATCTAGCCAGTGCCATGGCAAAAGATATAGATTGTGTATACGAAGCTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000133452.8 ENSMUST00000136351.8 ENSMUST00000144321.8 |
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| CDS CAA 72 bp | ACCTTTTCAGGATCAGCATCTGTCTTGTCGCACTTATaGATTGCAAGGATAATAGGAACAAGAAAAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: TFSGSASVLSHL*IARIIGTRKAP Trigger: TGGTGCTTTTCTTGTTCCTATTATCCTTGCAATCAATAAGTGCGACAAGACAGATGCTGATCCTGAAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132783.3 |
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| CDS CAA 72 bp | TGTTCAATAAAGCTTCGTATACACAATCTATATCTTTaGCCATGGCACTGGCTAGATCTTCAACAGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: CSIKLRIHNLYL*PWHWLDLQQSF Trigger: GAATGACTGTTGAAGATCTAGCCAGTGCCATGGCAAAAGATATAGATTGTGTATACGAAGCTTTATTGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020749.13 ENSMUST00000093239.11 ENSMUST00000133452.8 ENSMUST00000136351.8 ENSMUST00000144321.8 |
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