Pregenerated sensors for MTHFD2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029376Ensembl transcript IDs: ENSMUST00000071652.6, ENSMUST00000202781.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTaGTTAAATTTTTGCACAGGATTGCCTTGTAGAATACTCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: VSSVVAAFATWNRFH*LNFCTGLPCRILFS Trigger: GGAGAAGAGTATTCTACAAGGCAATCCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR CCA 90 bp | GTAAGCATTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTaGAATCGCTTCCATTGCTTAAATTTTTGCACAGGATTGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VSILRVSSVVAAFAT*NRFHCLNFCTGLPC Trigger: ACAAGGCAATCCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAATGCTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR GCA 90 bp | AAACAGCTAGTCTATTTCCACACAAGAGGCACACTGATAAAGACGTaGATTGAACAAGGATCATTATTAGTACACAAACAAACTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: KQLVYFHTRGTLIKT*IEQGSLLVHKQTGI Trigger: AATCCCAGTTTGTTTGTGTACTAATAATGATCCTTGTTCAATGCACGTCTTTATCAGTGTGCCTCTTGTGTGGAAATAGACTAGCTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATTTGCCGGTTGTCAAATaGGTAAGCAGCAGAATTCGT | + |
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Preference number: 2 (lower is better) Translates to: VSSVVAAFATWNRFHCLNLPVVK*VSSRIR Trigger: ACGAATTCTGCTGCTTACTCATTTGACAACCGGCAA...ATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR TCA 90 bp | TGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATTTTTGCACAGGTTACACGGCACTCATTaGGCTGGCAAAACAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: CCSLCYLESLPLLKFLHRLHGTH*AGKTVF Trigger: AAAAACTGTTTTGCCAGCTCAATGAGTGCCGTGTAA...CCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR GCA 90 bp | AACGCGGGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTCATTGCTTAAATTTTTaGACAGGATTGCCTTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: NAGGLTLHKVSILRVSSVHCLNF*TGLPCR Trigger: TCTACAAGGCAATCCTGTGCAAAAATTTAAGCAATG...AACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACCCGCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTGTTGCATGGAATCGCTTCCATTaGTTAAATTTTTGCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GGLTLHKVSILRVSSVVAWNRFH*LNFCTG Trigger: TCCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCA...TGCAACAACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR TCA 90 bp | TATCCTAGGAAGGAGAAGATGTGTGTGTGTACAAGAACTAGCTATTCGTTATATATCCATAAAGTCATGTaGACAATCAGTTCCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: YPRKEKMCVCTRTSYSLYIHKVM*TISSRM Trigger: CATTCTGGAACTGATTGTTCACATGACTTTATGGAT...ATATAACGAATAGCTAGTTCTTGTACACACACACATCTTCTCCTTCCTAGGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR GCA 90 bp | GATATTAGTGATAAACAGCTAGTCTATTTCCACACAAGAGGCACACTGATAAAGATGTTTGTGGGGAAATaGTTTAGTTTGACTTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: DISDKQLVYFHTRGTLIKMFVGK*FSLTLS Trigger: GGACAAAGTCAAACTAAAGCATTTCCCCACAAACAT...CTTTATCAGTGTGCCTCTTGTGTGGAAATAGACTAGCTGTTTATCACTAATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR CAA 90 bp | AATTGTATTTGGTTGATGTTTGTGGGGAAATGCTTTAGTTTGACTTaGTCCATTCATTTGTTTGGCGAGTTTGCTAACATCATCAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: NCIWLMFVGKCFSLT*SIHLFGEFANIISE Trigger: TTCACTGATGATGTTAGCAAACTCGCCAAACAAATGAATGGACAAAGTCAAACTAAAGCATTTCCCCACAAACATCAACCAAATACAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR TCA 72 bp | TTTGGCGAGTTTGCTAACATCATCAGTGAACTGAACTaGATGGTGTGGGAGCCTAACGCGGGTGGCCTTACA | + |
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Preference number: 3 (lower is better) Translates to: FGEFANIISELN*MVWEPNAGGLT Trigger: TGTAAGGCCACCCGCGTTAGGCTCCCACACCATTCAGTTCAGTTCACTGATGATGTTAGCAAACTCGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR TCA 72 bp | ATTTGTTTGGCGAGTTTGCTAACATCATCAGTGAACTaGACTGAATGGTGTGGGAGCCTAACGCGGGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: ICLASLLTSSVN*TEWCGSLTRVA Trigger: GGCCACCCGCGTTAGGCTCCCACACCATTCAGTTCAGTTCACTGATGATGTTAGCAAACTCGCCAAACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR CAA 90 bp | GCATCTGTGTTAGGAATCAGATGCTATCCTAGGAAGGAGAAGATGTGTGTGTGTTTGGAATCGCTTCCATaGCTTAAATTTTTGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: ASVLGIRCYPRKEKMCVCLESLP*LKFLHR Trigger: CCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAA...ACACACACACATCTTCTCCTTCCTAGGATAGCATCTGATTCCTAACACAGATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR CAA 90 bp | GCATCTGTGTTAGGAATCAGATGCTATCCTAGGAAGGAGAAGATGTGTGTGTGTGGGAAATGCTTTAGTTaGACTTTGTCCATTCATTTG | + |
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Preference number: 3 (lower is better) Translates to: ASVLGIRCYPRKEKMCVCGKCFS*TLSIHL Trigger: CAAATGAATGGACAAAGTCAAACTAAAGCATTTCCC...ACACACACACATCTTCTCCTTCCTAGGATAGCATCTGATTCCTAACACAGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR GCA 72 bp | GTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTaGTTAAATTTTTGCACAGGATTGCCTTGTAGAATA | + |
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Preference number: 3 (lower is better) Translates to: VVAAFATWNRFH*LNFCTGLPCRI Trigger: TATTCTACAAGGCAATCCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR CCA 72 bp | CTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTaGAATCGCTTCCATTGCTTAAATTTTTGCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: LRVSSVVAAFAT*NRFHCLNFCTG Trigger: TCCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR-3UTR CAA 90 bp | TGCTTTAGTTTGACTTTGTCCATTCATTTGTTTGGCGAGTTTGCTAACATCATCTTAGAGTTTCAAGTGTaGTTGCAGCCTTTGCTACTT | + |
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Preference number: 3 (lower is better) Translates to: CFSLTLSIHLFGEFANIILEFQV*LQPLLL Trigger: AAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAA...GATGATGTTAGCAAACTCGCCAAACAAATGAATGGACAAAGTCAAACTAAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR GCA 72 bp | GTCTATTTCCACACAAGAGGCACACTGATAAAGACGTaGATTGAACAAGGATCATTATTAGTACACAAACAA | + |
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Preference number: 3 (lower is better) Translates to: VYFHTRGTLIKT*IEQGSLLVHKQ Trigger: TTGTTTGTGTACTAATAATGATCCTTGTTCAATGCACGTCTTTATCAGTGTGCCTCTTGTGTGGAAATAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR GCA 90 bp | TCAAATGTCATGCCAACAGGAATGATGTTAAGTGTGACAATGAGGGACCAGACAGGAGTCTCTTCTCTCTaGTGGCCCTCCGGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SNVMPTGMMLSVTMRDQTGVSSL*WPSGRC Trigger: GCAGCGGCCGGAGGGCCAGCAGAGAGAAGAGACTCC...TGTCTGGTCCCTCATTGTCACACTTAACATCATTCCTGTTGGCATGACATTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202781.2 |
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| CDS-3UTR CCA 90 bp | AACGCGGGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTGCATGGCCACGGTCATaGGTCCCACACCTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NAGGLTLHKVSILRVSSVAWPRS*VPHLLG Trigger: TCCCAGGAGGTGTGGGACCCATGACCGTGGCCATGC...AACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACCCGCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR GCA 90 bp | AACGCGGGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTCTGGGGGTGTATCTGTaGGCTATCGTCACCGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: NAGGLTLHKVSILRVSSVLGVYL*AIVTVA Trigger: TGCAACGGTGACGATAGCGCACAGATACACCCCCAG...AACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACCCGCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | AACGCGGGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTTTTCCCAAACGGCACTaGCAGTGGCAGGGATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NAGGLTLHKVSILRVSSVFPKRH*QWQGSV Trigger: CACTGATCCCTGCCACTGCCAGTGCCGTTTGGGAAA...AACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACCCGCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR TCA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATAGTGGCAGGGATCAGTaGATGCTGGTCAAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: VSSVVAAFATWNRFHCLNSGRDQ*MLVKAQ Trigger: CTGTGCCTTGACCAGCATTCACTGATCCCTGCCACT...ATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | GCATCTGTGTTAGGAATCAGATGCTATCCTAGGAAGGAGAAGATGTGTGTGTGTAAAATGATACTCAGATaGGGCCTCCTGTTCCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: ASVLGIRCYPRKEKMCVCKMILR*GLLFPR Trigger: TCTCGGGAACAGGAGGCCCCATCTGAGTATCATTTT...ACACACACACATCTTCTCCTTCCTAGGATAGCATCTGATTCCTAACACAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | GGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTGTTGCAAAACGGCACTGGCAGTaGCAGGGATCAGTGAATGCT | + |
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Preference number: 4 (lower is better) Translates to: GGLTLHKVSILRVSSVVAKRHWQ*QGSVNA Trigger: AGCATTCACTGATCCCTGCCACTGCCAGTGCCGTTT...TGCAACAACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | TGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATTTTTGCACAGGCCTTCAGTTGTTCTCTaGGGGTGTATCTGTGCGCTA | + |
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Preference number: 4 (lower is better) Translates to: CCSLCYLESLPLLKFLHRPSVVL*GCICAL Trigger: TAGCGCACAGATACACCCCCAGAGAACAACTGAAGG...CCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR TCA 90 bp | TTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGGCCATGTTAGTTCCTaGGATGATAACGGCTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: FLEFQVLLQPLLLGIASIGHVSS*DDNGFV Trigger: CACGAAGCCGTTATCATCTCAGGAACTAACATGGCC...AATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR TCA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATTGTTCAGCTGATCAGTaGTGTCCAACAGTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VSSVVAAFATWNRFHCLNCSADQ*CPTVPP Trigger: AGGAGGAACTGTTGGACATCACTGATCAGCTGAACA...ATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR GCA 90 bp | TTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTACCCACATCAATTACTaGCGCACCTTCTCTGACCAT | + |
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Preference number: 4 (lower is better) Translates to: FLEFQVLLQPLLLGIASITHINY*RTFSDH Trigger: ATGGTCAGAGAAGGTGCGGCAGTAATTGATGTGGGT...AATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | TGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATTTTTGCACAGGCATCTCCAACTAACTTaGTCTTTCCCGTCACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: CCSLCYLESLPLLKFLHRHLQLT*SFPSQD Trigger: ATCCTGTGACGGGAAAGACCAAGTTAGTTGGAGATG...CCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | TTAAATTTTTGCACAGGATTGCCTTGTAGAATACTCTTCTCCACAGACAAGCTACACACCTCCTGGGACTaGAGTGATGAAGCTGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LNFCTGLPCRILFSTDKLHTSWD*SDEAGF Trigger: AAAGCCAGCTTCATCACTCCAGTCCCAGGAGGTGTG...TAGCTTGTCTGTGGAGAAGAGTATTCTACAAGGCAATCCTGTGCAAAAATTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR TCA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATTCCAACAGTTCCTCCTaGGAAACATTCTTGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VSSVVAAFATWNRFHCLNSNSSS*ETFLGF Trigger: AAAGCCCAAGAATGTTTCTCAGGAGGAACTGTTGGA...ATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR TCA 90 bp | AACGCGGGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTGAACTAATATACCGCTaGCTCTTGGATCCATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NAGGLTLHKVSILRVSSVELIYR*LLDPCS Trigger: TGAACATGGATCCAAGAGTCAGCGGTATATTAGTTC...AACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACCCGCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR GCA 90 bp | TTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTCATGATTCCACTCCTTaGTGTATCTCCTTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: FLEFQVLLQPLLLGIASIHDSTP*CISFWI Trigger: GATCCAGAAGGAGATACAGCAAGGAGTGGAATCATG...AATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | AACGCGGGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTTGCTGTATCTCCTTCTaGATCTGTTTGGCCATGTTA | + |
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Preference number: 4 (lower is better) Translates to: NAGGLTLHKVSILRVSSVCCISF*ICLAML Trigger: TAACATGGCCAAACAGATCCAGAAGGAGATACAGCA...AACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACCCGCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CCA 90 bp | TTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTTATACCGCTGACTCTTaGATCCATGTTCAGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: FLEFQVLLQPLLLGIASIYTADS*IHVQLI Trigger: GATCAGCTGAACATGGATCCAAGAGTCAGCGGTATA...AATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR TCA 90 bp | TATCCTAGGAAGGAGAAGATGTGTGTGTGTACAAGAACTAGCTATTCGTTATATTATCTCCCACTAAAATaGTACTCAGATGGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: YPRKEKMCVCTRTSYSLYYLPLK*YSDGAS Trigger: GGAGGCCCCATCTGAGTATCATTTTAGTGGGAGATA...ATATAACGAATAGCTAGTTCTTGTACACACACACATCTTCTCCTTCCTAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR TCA 90 bp | GATATTAGTGATAAACAGCTAGTCTATTTCCACACAAGAGGCACACTGATAAAGTCTGGGAGTGGAAGCTaGACTAATATACCGCTGACT | + |
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Preference number: 4 (lower is better) Translates to: DISDKQLVYFHTRGTLIKSGSGS*TNIPLT Trigger: AGTCAGCGGTATATTAGTTCAGCTTCCACTCCCAGA...CTTTATCAGTGTGCCTCTTGTGTGGAAATAGACTAGCTGTTTATCACTAATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR CAA 72 bp | TGGAATCGCTTCCATTGCTTAAATTTTTGCACAGGATaGCCTTGTAGAATACTCTTCTCCACAGACAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: WNRFHCLNFCTG*PCRILFSTDKL Trigger: TAGCTTGTCTGTGGAGAAGAGTATTCTACAAGGCAATCCTGTGCAAAAATTTAAGCAATGGAAGCGATTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR CAA 72 bp | GTGGGGAAATGCTTTAGTTTGACTTTGTCCATTCATTaGTTTGGCGAGTTTGCTAACATCATCAGTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: VGKCFSLTLSIH*FGEFANIISEL Trigger: CAGTTCACTGATGATGTTAGCAAACTCGCCAAACAAATGAATGGACAAAGTCAAACTAAAGCATTTCCCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR CAA 72 bp | TGGTTGATGTTTGTGGGGAAATGCTTTAGTTTGACTTaGTCCATTCATTTGTTTGGCGAGTTTGCTAACATC | + |
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Preference number: 4 (lower is better) Translates to: WLMFVGKCFSLT*SIHLFGEFANI Trigger: GATGTTAGCAAACTCGCCAAACAAATGAATGGACAAAGTCAAACTAAAGCATTTCCCCACAAACATCAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| 3UTR CAA 72 bp | TGTATTTGGTTGATGTTTGTGGGGAAATGCTTTAGTTaGACTTTGTCCATTCATTTGTTTGGCGAGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: CIWLMFVGKCFS*TLSIHLFGEFA Trigger: AGCAAACTCGCCAAACAAATGAATGGACAAAGTCAAACTAAAGCATTTCCCCACAAACATCAACCAAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR GCA 90 bp | TTAAATTTTTGCACAGGATTGCCTTGTAGAATACTCTTCTCCACAGACAAGCTACTGGAGCAATTCCATTaGATATTGTTCTCTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: LNFCTGLPCRILFSTDKLLEQFH*ILFSHL Trigger: TAGATGAGAGAACAATATGCAATGGAATTGCTCCAG...TAGCTTGTCTGTGGAGAAGAGTATTCTACAAGGCAATCCTGTGCAAAAATTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS GCA 90 bp | CCTCTGGAAGATGGAGTCTCTTCTCTCTGCTGGCCCTCCGGCCGCTaGTCCCGAAGCCGCGCCACGCGCGCTCGGCGACGCCCGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PLEDGVSSLCWPSGR*SRSRATRARRRPGL Trigger: GAGCCCCGGGCGTCGCCGAGCGCGCGTGGCGCGGCTTCGGGAGCAGCGGCCGGAGGGCCAGCAGAGAGAAGAGACTCCATCTTCCAGAGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202781.2 |
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| CDS CCA 90 bp | CATCACCTCCAGGACGCTCGTGCTCTCCGTCCGTGTGCAGCAGCATaGCAATCGGCATGCCCACGTTCTTGGATCTTCCCGCCACGACCA | + |
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Preference number: 5 (lower is better) Translates to: HHLQDARALRPCAAA*QSACPRSWIFPPRP Trigger: TGGTCGTGGCGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACACGGACGGAGAGCACGAGCGTCCTGGAGGTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS GCA 90 bp | GACGCTCGTGCTCTCCGTCCGTGTGCAGCAGCATGGCAATCGGCATaGCCACGTTCTTGGATCTTCCCGCCACGACCACATTTTTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: DARALRPCAAAWQSA*PRSWIFPPRPHFSQ Trigger: TTGGGAAAAATGTGGTCGTGGCGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACACGGACGGAGAGCACGAGCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS GCA 90 bp | CTTCAGTTGTTCTCTGGGGGTGTATCTGTGCGCTATCGTCACCGTTaGATCACCTCCAGGACGCTCGTGCTCTCCGTCCGTGTGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LQLFSGGVSVRYRHR*ITSRTLVLSVRVQQ Trigger: CTGCTGCACACGGACGGAGAGCACGAGCGTCCTGGAGGTGATGCAACGGTGACGATAGCGCACAGATACACCCCCAGAGAACAACTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 90 bp | TCCTTGCTGTATCTCCTTCTGGATCTGTTTGGCCATGTTAGTTCCTaGGATGATAACGGCTTCGTGTCTCCGGCCGCTGCTCCCGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SLLYLLLDLFGHVSS*DDNGFVSPAAAPEA Trigger: GGCTTCGGGAGCAGCGGCCGGAGACACGAAGCCGTTATCATCTCAGGAACTAACATGGCCAAACAGATCCAGAAGGAGATACAGCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 90 bp | CTCCGTCCGTGTGCAGCAGCATGGCAATCGGCATGCCCACGTTCTTaGATCTTCCCGCCACGACCACATTTTTCCCAAATGTTTCGATTC | + |
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Preference number: 5 (lower is better) Translates to: LRPCAAAWQSACPRS*IFPPRPHFSQMFRF Trigger: GAATCGAAACATTTGGGAAAAATGTGGTCGTGGCGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACACGGACGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 90 bp | ATCAACCTGGGAATACCCGCAGCCACTATGATGATGTCTGCTAGTTaGGTGTGGGCCTTCAGTTGTTCTCTGGGGGTGTATCTGTGCGCT | + |
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Preference number: 5 (lower is better) Translates to: INLGIPAATMMMSAS*VWAFSCSLGVYLCA Trigger: AGCGCACAGATACACCCCCAGAGAACAACTGAAGGCCCACACTCAACTAGCAGACATCATCATAGTGGCTGCGGGTATTCCCAGGTTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 90 bp | TTCCCGAGAGCGATCCATGATTCCACTCCTTGCTGTATCTCCTTCTaGATCTGTTTGGCCATGTTAGTTCCTGAGATGATAACGGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: FPRAIHDSTPCCISF*ICLAMLVPEMITAS Trigger: CGAAGCCGTTATCATCTCAGGAACTAACATGGCCAAACAGATCCAGAAGGAGATACAGCAAGGAGTGGAATCATGGATCGCTCTCGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 90 bp | TCTTTTGATGATTTCCCAAACGGCACTGGCAGTGGCAGGGATCAGTaGATGCTGGTCAAGGCACAGTCGTCCAATATTGATAATGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SFDDFPNGTGSGRDQ*MLVKAQSSNIDNVK Trigger: TTTCACATTATCAATATTGGACGACTGTGCCTTGACCAGCATTCACTGATCCCTGCCACTGCCAGTGCCGTTTGGGAAATCATCAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | TTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTAGTGTGGGCCTTCAGTaGTTCTCTGGGGGTGTATCT | + |
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Preference number: 5 (lower is better) Translates to: FLEFQVLLQPLLLGIASISVGLQ*FSGGVS Trigger: AGATACACCCCCAGAGAACAACTGAAGGCCCACACT...AATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATTCCTTCTGGATCTGTTaGGCCATGTTAGTTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VSSVVAAFATWNRFHCLNSFWIC*AMLVPE Trigger: CTCAGGAACTAACATGGCCAAACAGATCCAGAAGGA...ATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | AACGCGGGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTTCGATTCCTGCTCTTTaGATGATTTCCCAAACGGCA | + |
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Preference number: 5 (lower is better) Translates to: NAGGLTLHKVSILRVSSVSIPAL*MISQTA Trigger: TGCCGTTTGGGAAATCATCAAAAGAGCAGGAATCGA...AACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACCCGCGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATACATCTCCAACTAACTaGGTCTTTCCCGTCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: VSSVVAAFATWNRFHCLNTSPTN*VFPVTG Trigger: TCCTGTGACGGGAAAGACCAAGTTAGTTGGAGATGT...ATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | TTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTTCCCGTCACAGGATCTaGTATATAGTTGATACCCAC | + |
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Preference number: 5 (lower is better) Translates to: FLEFQVLLQPLLLGIASISRHRI*YIVDTH Trigger: GTGGGTATCAACTATATACAAGATCCTGTGACGGGA...AATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 90 bp | ATCAGTGAATGCTGGTCAAGGCACAGTCGTCCAATATTGATAATGTaGAATCCATCAACGTCCTTTTCTGGAGCAATTCCATTGCATATT | + |
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Preference number: 5 (lower is better) Translates to: ISECWSRHSRPILIM*NPSTSFSGAIPLHI Trigger: AATATGCAATGGAATTGCTCCAGAAAAGGACGTTGATGGATTTCACATTATCAATATTGGACGACTGTGCCTTGACCAGCATTCACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 90 bp | CAGTCGTCCAATATTGATAATGTGAAATCCATCAACGTCCTTTTCTaGAGCAATTCCATTGCATATTGTTCTCTCATCTACATGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QSSNIDNVKSINVLF*SNSIAYCSLIYMVW Trigger: CCAGACCATGTAGATGAGAGAACAATATGCAATGGAATTGCTCCAGAAAAGGACGTTGATGGATTTCACATTATCAATATTGGACGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | GGTGGCCTTACACTACACAAAGTAAGCATTCTTAGAGTTTCAAGTGTTGTTGCATCTGGAGCAATTCCATaGCATATTGTTCTCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: GGLTLHKVSILRVSSVVASGAIP*HIVLSS Trigger: AGATGAGAGAACAATATGCAATGGAATTGCTCCAGA...TGCAACAACACTTGAAACTCTAAGAATGCTTACTTTGTGTAGTGTAAGGCCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | TTCTTAGAGTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTAGTAGGCGATATTCTTaGCAGCTAAAAGTGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLEFQVLLQPLLLGIASISRRYS*QLKVCS Trigger: AGAACACACTTTTAGCTGCAAAGAATATCGCCTACT...AATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAACTCTAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS-3UTR CAA 90 bp | GTTTCAAGTGTTGTTGCAGCCTTTGCTACTTGGAATCGCTTCCATTGCTTAAATCAATTCCATTGCATATaGTTCTCTCATCTACATGGT | + |
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Preference number: 5 (lower is better) Translates to: VSSVVAAFATWNRFHCLNQFHCI*FSHLHG Trigger: ACCATGTAGATGAGAGAACAATATGCAATGGAATTG...ATTTAAGCAATGGAAGCGATTCCAAGTAGCAAAGGCTGCAACAACACTTGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 72 bp | CAGGACGCTCGTGCTCTCCGTCCGTGTGCAGCAGCATaGCAATCGGCATGCCCACGTTCTTGGATCTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: QDARALRPCAAA*QSACPRSWIFP Trigger: CGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACACGGACGGAGAGCACGAGCGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS GCA 72 bp | GCTCTCCGTCCGTGTGCAGCAGCATGGCAATCGGCATaGCCACGTTCTTGGATCTTCCCGCCACGACCACAT | + |
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Preference number: 6 (lower is better) Translates to: ALRPCAAAWQSA*PRSWIFPPRPH Trigger: ATGTGGTCGTGGCGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACACGGACGGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS GCA 72 bp | TTCTCTGGGGGTGTATCTGTGCGCTATCGTCACCGTTaGATCACCTCCAGGACGCTCGTGCTCTCCGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: FSGGVSVRYRHR*ITSRTLVLSVR Trigger: ACGGACGGAGAGCACGAGCGTCCTGGAGGTGATGCAACGGTGACGATAGCGCACAGATACACCCCCAGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 72 bp | TGTGCAGCAGCATGGCAATCGGCATGCCCACGTTCTTaGATCTTCCCGCCACGACCACATTTTTCCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: CAAAWQSACPRS*IFPPRPHFSQM Trigger: CATTTGGGAAAAATGTGGTCGTGGCGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CAA 72 bp | GTGTGCAGCAGCATGGCAATCGGCATGCCCACGTTCTaGGATCTTCCCGCCACGACCACATTTTTCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: VCSSMAIGMPTF*DLPATTTFFPN Trigger: ATTTGGGAAAAATGTGGTCGTGGCGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CAA 90 bp | TCTCCGTCCGTGTGCAGCAGCATGGCAATCGGCATGCCCACGTTCTaGGATCTTCCCGCCACGACCACATTTTTCCCAAATGTTTCGATT | + |
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Preference number: 6 (lower is better) Translates to: SPSVCSSMAIGMPTF*DLPATTTFFPNVSI Trigger: AATCGAAACATTTGGGAAAAATGTGGTCGTGGCGGGAAGATCCAAGAACGTGGGCATGCCGATTGCCATGCTGCTGCACACGGACGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 72 bp | TGTCTGCTAGTTGAGTGTGGGCCTTCAGTTGTTCTCTaGGGGTGTATCTGTGCGCTATCGTCACCGTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: CLLVECGPSVVL*GCICALSSPLH Trigger: ATGCAACGGTGACGATAGCGCACAGATACACCCCCAGAGAACAACTGAAGGCCCACACTCAACTAGCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 72 bp | TATCTCCTTCTGGATCTGTTTGGCCATGTTAGTTCCTaGGATGATAACGGCTTCGTGTCTCCGGCCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: YLLLDLFGHVSS*DDNGFVSPAAA Trigger: AGCAGCGGCCGGAGACACGAAGCCGTTATCATCTCAGGAACTAACATGGCCAAACAGATCCAGAAGGAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 72 bp | GGAATACCCGCAGCCACTATGATGATGTCTGCTAGTTaGGTGTGGGCCTTCAGTTGTTCTCTGGGGGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: GIPAATMMMSAS*VWAFSCSLGVY Trigger: ATACACCCCCAGAGAACAACTGAAGGCCCACACTCAACTAGCAGACATCATCATAGTGGCTGCGGGTATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS GCA 72 bp | TCCCAAACGGCACTGGCAGTGGCAGGGATCAGTGAATaGTGGTCAAGGCACAGTCGTCCAATATTGATAATG | + |
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Preference number: 6 (lower is better) Translates to: SQTALAVAGISE*WSRHSRPILIM Trigger: CATTATCAATATTGGACGACTGTGCCTTGACCAGCATTCACTGATCCCTGCCACTGCCAGTGCCGTTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 72 bp | CTTGCTGGGTTATCTCCCACTAAAATGATACTCAGATaGGGCCTCCTGTTCCCGAGAGCGATCCATGATTCC | + |
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Preference number: 6 (lower is better) Translates to: LAGLSPTKMILR*GLLFPRAIHDS Trigger: GGAATCATGGATCGCTCTCGGGAACAGGAGGCCCCATCTGAGTATCATTTTAGTGGGAGATAACCCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CAA 72 bp | GATTCCACTCCTTGCTGTATCTCCTTCTGGATCTGTTaGGCCATGTTAGTTCCTGAGATGATAACGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: DSTPCCISFWIC*AMLVPEMITAS Trigger: CGAAGCCGTTATCATCTCAGGAACTAACATGGCCAAACAGATCCAGAAGGAGATACAGCAAGGAGTGGAATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 72 bp | AGATACCTACAGCAGAAGCCGCTTTTATCTTATTCCTaGCATAGGTGTGGCTTGCTGGGTTATCTCCCACTA | + |
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Preference number: 6 (lower is better) Translates to: RYLQQKPLLSYS*HRCGLLGYLPL Trigger: TAGTGGGAGATAACCCAGCAAGCCACACCTATGTCAGGAATAAGATAAAAGCGGCTTCTGCTGTAGGTATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CCA 72 bp | GCGATCCATGATTCCACTCCTTGCTGTATCTCCTTCTaGATCTGTTTGGCCATGTTAGTTCCTGAGATGATA | + |
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Preference number: 6 (lower is better) Translates to: AIHDSTPCCISF*ICLAMLVPEMI Trigger: TATCATCTCAGGAACTAACATGGCCAAACAGATCCAGAAGGAGATACAGCAAGGAGTGGAATCATGGATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 72 bp | ATTGTTCTCTCATCTACATGGTCTGGGAGTGGAAGCTaGACTAATATACCGCTGACTCTTGGATCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: IVLSSTWSGSGS*TNIPLTLGSMF Trigger: GAACATGGATCCAAGAGTCAGCGGTATATTAGTTCAGCTTCCACTCCCAGACCATGTAGATGAGAGAACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CAA 72 bp | CATCAACGTCCTTTTCTGGAGCAATTCCATTGCATATaGTTCTCTCATCTACATGGTCTGGGAGTGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: HQRPFLEQFHCI*FSHLHGLGVEA Trigger: AGCTTCCACTCCCAGACCATGTAGATGAGAGAACAATATGCAATGGAATTGCTCCAGAAAAGGACGTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS TCA 72 bp | TGCTGGTCAAGGCACAGTCGTCCAATATTGATAATGTaGAATCCATCAACGTCCTTTTCTGGAGCAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: CWSRHSRPILIM*NPSTSFSGAIP Trigger: TGGAATTGCTCCAGAAAAGGACGTTGATGGATTTCACATTATCAATATTGGACGACTGTGCCTTGACCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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| CDS CAA 90 bp | TGTGAAATCCATCAACGTCCTTTTCTGGAGCAATTCCATTGCATATaGTTCTCTCATCTACATGGTCTGGGAGTGGAAGCTGAACTAATA | + |
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Preference number: 6 (lower is better) Translates to: CEIHQRPFLEQFHCI*FSHLHGLGVEAELI Trigger: TATTAGTTCAGCTTCCACTCCCAGACCATGTAGATGAGAGAACAATATGCAATGGAATTGCTCCAGAAAAGGACGTTGATGGATTTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071652.6 |
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