Pregenerated sensors for MTHFD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021048Ensembl transcript IDs: ENSMUST00000021443.7, ENSMUST00000220046.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTTCTTCAGTGGGCCTaGACAGACACTGGCCGGACA | + |
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Preference number: 2 (lower is better) Translates to: ETPTISEALQGGDRLPRLLLQWA*TDTGRT Trigger: TGTCCGGCCAGTGTCTGTTCAGGCCCACTGAAGAAG...AAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| 3UTR TCA 72 bp | GACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTaGACAGACACTGGCCGGACAGAGTGGCCTCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: DFQDFCTLLQWA*TDTGRTEWPLG Trigger: TCCAAGAGGCCACTCTGTCCGGCCAGTGTCTGTTCAGGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | AAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGAGGCAGTCCAGCGGTaGCCGTGGGGCCACCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: KLFRAGTDFQDFCTLLQWEAVQR*PWGHPR Trigger: ACGGGGGTGGCCCCACGGTCACCGCTGGACTGCCTC...CCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCGAGGCAGTCCAGCGGTaGCCGTGGGGCCACCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFEAVQR*PWGHPR Trigger: ACGGGGGTGGCCCCACGGTCACCGCTGGACTGCCTC...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCCCACAGCCCCAGGCTTaGTCCACTCCCCCTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: LFRAGTDFQDFCTLLQWAPQPQA*STPPSP Trigger: TGGTGAAGGGGGAGTGGATCAAGCCTGGGGCTGTGG...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCAACCTGCCCCAACGCTaGCACGGATGTCCCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LFRAGTDFQDFCTLLQWANLPQR*HGCPGW Trigger: CCATCCGGGACATCCGTGCCAGCGTTGGGGCAGGTT...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | AAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGTTGCCAGGCCAGGGGTaGAGCCAGGTACCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KLFRAGTDFQDFCTLLQWLPGQG*SQVPAP Trigger: AGGAGCAGGTACCTGGCTTCACCCCTGGCCTGGCAA...CCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR GCA 90 bp | CAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTGAACAGACACTGGCCAGAGGAGCTGGAAGCTaGTGGGGGCCTGTGACGCTC | + |
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Preference number: 4 (lower is better) Translates to: QTSKTSAHFFSGPEQTLARGAGS*WGPVTL Trigger: GAGCGTCACAGGCCCCCAGCAGCTTCCAGCTCCTCT...GGCCAGTGTCTGTTCAGGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCGCACCAGCCCGATCGTaGTGGTACTCTTCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LFRAGTDFQDFCTLLQWAAPARS*WYSSLL Trigger: GAGAAGGGAAGAGTACCACCACGATCGGGCTGGTGC...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACGGAGCTGGAAGCTGCTaGGGGCCTGTGACGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDGAGSC*GPVTLS Trigger: AGAGAGCGTCACAGGCCCCCAGCAGCTTCCAGCTCC...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGCCAACCTGCAGGATTaGCAGGCCAGGGGTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SEALQGGDRLPRLLHTSSANLQD*QARGEA Trigger: GGCTTCACCCCTGGCCTGGCAATCCTGCAGGTTGGC...TGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR CCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTGCATTGCCACGGTCATaGGCCCCACGCCACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLALPRS*APRHQG Trigger: TCCCTGGTGGCGTGGGGCCCATGACCGTGGCAATGC...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACGCATTGCCACGGTCATaGGCCCCACGCCACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDALPRS*APRHQG Trigger: TCCCTGGTGGCGTGGGGCCCATGACCGTGGCAATGC...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGGCACCAGCCCGATCGTaGTGGTACTCTTCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGAPARS*WYSSLL Trigger: GAGAAGGGAAGAGTACCACCACGATCGGGCTGGTGC...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGTCCCGTGTGCAATGTTaGCGAAAGGCCCGGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGSRVQC*RKARHG Trigger: TCCATGCCGGGCCTTTCGCCAACATTGCACACGGGA...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCAACCTGCCCCAACGCTaGCACGGATGTCCCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFNLPQR*HGCPGW Trigger: CCATCCGGGACATCCGTGCCAGCGTTGGGGCAGGTT...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACCCACAGCCCCAGGCTTaGTCCACTCCCCCTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDPQPQA*STPPSP Trigger: TGGTGAAGGGGGAGTGGATCAAGCCTGGGGCTGTGG...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | AAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGCAGGGCCTACCAGCTTaGGTGCAATCCGGTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: KLFRAGTDFQDFCTLLQWQGLPA*VQSGLQ Trigger: TTGCAGACCGGATTGCACTCAAGCTGGTAGGCCCTG...CCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTATCAAACTGGGCCGTaGGTGTGTGGCCTTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LFRAGTDFQDFCTLLQWAYQTGP*VCGLSL Trigger: CAGAGAAAGGCCACACACGCACGGCCCAGTTTGATA...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCAGAGGAGCTGGAAGCTaGTGGGGGCCTGTGACGCTC | + |
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Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFRGAGS*WGPVTL Trigger: GAGCGTCACAGGCCCCCAGCAGCTTCCAGCTCCTCT...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACGGAGCTGGAAGCTGCTaGGGGCCTGTGACGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDGAGSC*GPVTLS Trigger: AGAGAGCGTCACAGGCCCCCAGCAGCTTCCAGCTCC...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACGGGCCAGGTTCCCGATaGGCTTTGGTTTGCAAGATC | + |
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Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDGPGSR*ALVCKI Trigger: GATCTTGCAAACCAAAGCTCATCGGGAACCTGGCCC...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTTCTCTGTCGCCAACCTaGAGGATTGCCAGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLSLSPT*RIARPG Trigger: CCCTGGCCTGGCAATCCTGCAGGTTGGCGACAGAGA...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR GCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACAGGATACAGGAAACCTaGCCCAACGCTGGCACGGAT | + |
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Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDRIQET*PNAGTD Trigger: ATCCGTGCCAGCGTTGGGGCAGGTTTCCTGTATCCT...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | AAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGTTCACCATCTCAGGCTaGCCTGTGGCAACCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: KLFRAGTDFQDFCTLLQWFTISG*PVATTR Trigger: TCTGGTGGTTGCCACAGGCCAGCCTGAGATGGTGAA...CCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCATCTGTCAGCGTGGTaGGGTCAGTCTTCTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGHLSAW*GQSSQC Trigger: GCATTGAGAAGACTGACCCCACCACGCTGACAGATG...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACCCCCCTTCTGCCCAGTaGGTGCACTTGACAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: KALGKLPLFLKLFRAGTDPPSAQ*VHLTAS Trigger: TGATGCTGTCAAGTGCACCCACTGGGCAGAAGGGGG...GTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCCCCCTTCTGCCCAGTaGGTGCACTTGACAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFPPSAQ*VHLTAS Trigger: TGATGCTGTCAAGTGCACCCACTGGGCAGAAGGGGG...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACCAGGGCCTACCAGCTTaGGTGCAATCCGGTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDQGLPA*VQSGLQ Trigger: TTGCAGACCGGATTGCACTCAAGCTGGTAGGCCCTG...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGTGCGCTCTCTACTGTaGTCTGCATCAGCATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EALQGGDRLPRLLHTSSVVRSLL*SASALP Trigger: TGGCAATGCTGATGCAGAGCACAGTAGAGAGCGCAC...CACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGGTGCCCTCTAAGGTCTaGATGAGGTTGGGCTTGATT | + |
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Preference number: 4 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGVPSKV*MRLGLI Trigger: AATCAAGCCCAACCTCATGCAGACCTTAGAGGGCAC...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCAGGATACAGGAAACCTaGCCCAACGCTGGCACGGAT | + |
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Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFRIQET*PNAGTD Trigger: ATCCGTGCCAGCGTTGGGGCAGGTTTCCTGTATCCT...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCAGCTCGCCCTCTCCTTaGCCTCATCGTAGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFSSPSP*PHRRPH Trigger: ATGTGGCCTACGATGAGGCCAAGGAGAGGGCGAGCT...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGCTCGCCCTCTCCTTaGCCTCATCGTAGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDSSPSP*PHRRPH Trigger: ATGTGGCCTACGATGAGGCCAAGGAGAGGGCGAGCT...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACCTTTTATCCCAAAGGTaGGGCCCTGCGAAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KALGKLPLFLKLFRAGTDLLSQR*GPAKAV Trigger: GACAGCCTTCGCAGGGCCCCACCTTTGGGATAAAAG...GTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | GAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTGCAGCAGTGATGGCGTaGATGTCACCAGTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ETPTISEALQGGDRLPRLAAVMA*MSPVRW Trigger: CCACCTCACTGGTGACATCCACGCCATCACTGCTGC...AAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTGCAGCAGTGATGGCGTaGATGTCACCAGTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTAAVMA*MSPVRW Trigger: CCACCTCACTGGTGACATCCACGCCATCACTGCTGC...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | GAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTTCCCGTGTGCAATGTTaGCGAAAGGCCCGGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: ETPTISEALQGGDRLPRLSRVQC*RKARHG Trigger: TCCATGCCGGGCCTTTCGCCAACATTGCACACGGGA...AAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCTTCTGTGTAAGCCTTaGGAAGAGGCAGTCCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFLLCKP*EEAVQR Trigger: CCGCTGGACTGCCTCTTCCCAAGGCTTACACAGAAG...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGTGGGTGTGCATGGGATaGAGCAGTCATTTAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGWVCMG*SSHLDH Trigger: GTGATCTAAATGACTGCTTCATCCCATGCACACCCA...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR TCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCGGGCCAGGTTCCCGATaGGCTTTGGTTTGCAAGATC | + |
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Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFGPGSR*ALVCKI Trigger: GATCTTGCAAACCAAAGCTCATCGGGAACCTGGCCC...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCATCTGTATCTGTCTTaGACACGTTCACAGCCACGA | + |
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Preference number: 4 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGHLYLS*TRSQPR Trigger: TCGTGGCTGTGAACGTGTTCAAGACAGATACAGATG...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTCCAGGTACCTGCTCCTaGATCCGAGTTACCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTPGTCS*IRVTWF Trigger: GAACCAGGTAACTCGGATGCAGGAGCAGGTACCTGG...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR GCA 90 bp | CAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTGAACAGACACTGGCCCACATCCTTCTCGGGTaGAATGGCATTGATGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTSKTSAHFFSGPEQTLAHILLG*NGIDDC Trigger: GCAGTCATCAATGCCATTGCACCCGAGAAGGATGTG...GGCCAGTGTCTGTTCAGGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
||
| CDS-3UTR GCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCTCTCTACTGTGCTCTaGATCAGCATTGCCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFLSTVL*ISIATV Trigger: GACCGTGGCAATGCTGATGCAGAGCACAGTAGAGAG...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | CAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTGAACAGACACTGGCCCTAGCCTCCGTAACCTaGGGATTTGGATGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSKTSAHFFSGPEQTLALASVT*GFGCQR Trigger: TCTCTGACATCCAAATCCGCAGGTTACGGAGGCTAG...GGCCAGTGTCTGTTCAGGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACGAGTGCAATCCGGTCTaGAATGATGGAGGAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDECNPV*NDGGIP Trigger: GGGAATTCCTCCATCATTGCAGACCGGATTGCACTC...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCAGTGTGTTTTGGCCATaGAGATGGGTAGATTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFRAGTDFQDFCTLLQWASVFWP*RWVDSQ Trigger: TTGGGAATCTACCCATCTGCATGGCCAAAACACACT...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTTTCACCATCTCAGGCTaGCCTGTGGCAACCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLFTISG*PVATTR Trigger: TCTGGTGGTTGCCACAGGCCAGCCTGAGATGGTGAA...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCTTTTATCCCAAAGGTaGGGCCCTGCGAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLLLSQR*GPAKAV Trigger: GACAGCCTTCGCAGGGCCCCACCTTTGGGATAAAAG...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACCAGAACCACCACGTGTaGCTGGAGACCAGAATACCG | + |
|
Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDQNHHV*LETRIP Trigger: CGGTATTCTGGTCTCCAGCCACACGTGGTGGTTCTG...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCCTTCTGTGTAAGCCTTaGGAAGAGGCAGTCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFLLCKP*EEAVQR Trigger: CCGCTGGACTGCCTCTTCCCAAGGCTTACACAGAAG...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGCATCTGTATCTGTCTTaGACACGTTCACAGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: EALQGGDRLPRLLHTSSVHLYLS*TRSQPR Trigger: TCGTGGCTGTGAACGTGTTCAAGACAGATACAGATG...CACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCCTCTCTACTGTGCTCTaGATCAGCATTGCCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFLSTVL*ISIATV Trigger: GACCGTGGCAATGCTGATGCAGAGCACAGTAGAGAG...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTGTGCGCTCTCTACTGTaGTCTGCATCAGCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLVRSLL*SASALP Trigger: TGGCAATGCTGATGCAGAGCACAGTAGAGAGCGCAC...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTATCAAACTGGGCCGTaGGTGTGTGGCCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTYQTGP*VCGLSL Trigger: CAGAGAAAGGCCACACACGCACGGCCCAGTTTGATA...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCGAGTGCAATCCGGTCTaGAATGATGGAGGAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFECNPV*NDGGIP Trigger: GGGAATTCCTCCATCATTGCAGACCGGATTGCACTC...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACGGAGTCCAGGCATTGTaGTCATCGTTCCTACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDGVQAL*SSFLLK Trigger: CTTTAGTAGGAACGATGAGCACAATGCCTGGACTCC...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTCATCTGTCAGCGTGGTaGGGTCAGTCTTCTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTHLSAW*GQSSQC Trigger: GCATTGAGAAGACTGACCCCACCACGCTGACAGATG...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCCTCTCTGCCATGTTATaGTTTCTGGGTCAATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFRAGTDFQDFCTLLQWALSAML*FLGQYP Trigger: TGGATATTGACCCAGAAACCATAACATGGCAGAGAG...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTACAGAGATATCAAACTaGGCCGTGCGTGTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLTEISN*AVRVWP Trigger: AGGCCACACACGCACGGCCCAGTTTGATATCTCTGT...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | GAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTACAGAGATATCAAACTaGGCCGTGCGTGTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETPTISEALQGGDRLPRLTEISN*AVRVWP Trigger: AGGCCACACACGCACGGCCCAGTTTGATATCTCTGT...AAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCAGCTTGTTATACTaGATTGTCCACTTCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDFSLLY*IVHFPG Trigger: GCCAGGGAAGTGGACAATTCAGTATAACAAGCTGAA...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACGGCAATCTGCACCCCTaGCTCTTTGATGAGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDGNLHP*LFDEFQ Trigger: TTGGAACTCATCAAAGAGGCAGGGGTGCAGATTGCC...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
||
| CDS-3UTR GCA 90 bp | GAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTAGCCTCCGTAACCTaGGGATTTGGATGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETPTISEALQGGDRLPRLLASVT*GFGCQR Trigger: TCTCTGACATCCAAATCCGCAGGTTACGGAGGCTAG...AAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCGTGCCCTCTAAGGTCTaGATGAGGTTGGGCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFVPSKV*MRLGLI Trigger: AATCAAGCCCAACCTCATGCAGACCTTAGAGGGCAC...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACTTCTCCCAGCGGTGTTaGAGTAATTCCAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDFSQRC*SNSSHH Trigger: GTGGTGACTGGAATTACTCCAACACCGCTGGGAGAA...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTTCTCCCAGCGGTGTTaGAGTAATTCCAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFFSQRC*SNSSHH Trigger: GTGGTGACTGGAATTACTCCAACACCGCTGGGAGAA...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR TCA 90 bp | GAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCCTCGTTCAGGGAGATaGCATATTTTAACACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ETPTISEALQGGDRLPRLPRSGR*HILTPR Trigger: CCGAGGTGTTAAAATATGTCATCTCCCTGAACGAGG...AAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
||
| CDS-3UTR TCA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGGATTTTATCCTCAATTaGGAGCTTGAGGTCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGDFILN*ELEVIE Trigger: CTCTATGACCTCAAGCTCTCAATTGAGGATAAAATC...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR GCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCGAGGTCATGCATGGGTaGACCAACTATCTTACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFEVMHG*TNYLTS Trigger: CGAAGTAAGATAGTTGGTGCACCCATGCATGACCTC...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
||
| CDS-3UTR GCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCGGAGTCCAGGCATTGTaGTCATCGTTCCTACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFGVQAL*SSFLLK Trigger: CTTTAGTAGGAACGATGAGCACAATGCCTGGACTCC...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTATAGCAATGTCACTTaGGACAGGAGTCTTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDYSNVT*DRSLEV Trigger: AACCTCAAGACTCCTGTCCCAAGTGACATTGCTATA...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTGAACAGACACTGGCCCCATGTTATGGTTTCTaGGTCAATATCCAGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTSKTSAHFFSGPEQTLAPCYGF*VNIQSC Trigger: GCAAGACTGGATATTGACCCAGAAACCATAACATGG...GGCCAGTGTCTGTTCAGGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGCCATGTTATGGTTTCTaGGTCAATATCCAGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLFRAGTDFQDFCTLLQWPCYGF*VNIQSC Trigger: GCAAGACTGGATATTGACCCAGAAACCATAACATGG...CCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTTTCAGCTTGTTATACTaGATTGTCCACTTCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLFSLLY*IVHFPG Trigger: GCCAGGGAAGTGGACAATTCAGTATAACAAGCTGAA...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTTTGGGACAGGAGTCTTaGGGTTCAGCTTGTTATACT | + |
|
Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLLGQES*GSACYT Trigger: AGTATAACAAGCTGAACCTCAAGACTCCTGTCCCAA...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR TCA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTTGGGACAGGAGTCTTaGGGTTCAGCTTGTTATACT | + |
|
Preference number: 4 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFLGQES*GSACYT Trigger: AGTATAACAAGCTGAACCTCAAGACTCCTGTCCCAA...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR GCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTAGTGTGTTTTGGCCATaGAGATGGGTAGATTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTSVFWP*RWVDSQ Trigger: TTGGGAATCTACCCATCTGCATGGCCAAAACACACT...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCATGTCACCAGTGAGGTaGAGGTTAAACTCTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFMSPVR*RLNSSI Trigger: TATGGAAGAGTTTAACCTCCACCTCACTGGTGACAT...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTGAACAGACACTGGCCCGTAACCTGCGGATTTaGATGTCAGAGAATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTSKTSAHFFSGPEQTLARNLRI*MSENFL Trigger: AAGAAAATTCTCTGACATCCAAATCCGCAGGTTACG...GGCCAGTGTCTGTTCAGGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACCGTAACCTGCGGATTTaGATGTCAGAGAATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDRNLRI*MSENFL Trigger: AAGAAAATTCTCTGACATCCAAATCCGCAGGTTACG...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGATTTTATCCTCAATTaGGAGCTTGAGGTCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEALQGGDRLPRLLHTSSDFILN*ELEVIE Trigger: CTCTATGACCTCAAGCTCTCAATTGAGGATAAAATC...TGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTATAGCAATGTCACTTaGGACAGGAGTCTTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTYSNVT*DRSLEV Trigger: AACCTCAAGACTCCTGTCCCAAGTGACATTGCTATA...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTATGTCACCAGTGAGGTaGAGGTTAAACTCTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTMSPVR*RLNSSI Trigger: TATGGAAGAGTTTAACCTCCACCTCACTGGTGACAT...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGGCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACCTCTCTGCCATGTTATaGTTTCTGGGTCAATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MKGFRETPTISEALQGGDLSAML*FLGQYP Trigger: TGGATATTGACCCAGAAACCATAACATGGCAGAGAG...GTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGCCTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGTGGTTTTGTATCATCTaGAACATAATTGATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KLFRAGTDFQDFCTLLQWWFCII*NIIDPT Trigger: TGTGGGATCAATTATGTTCCAGATGATACAAAACCA...CCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTGACTTTCCTTCCATTTaGTTTTGTATCATCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLDFPSI*FCIIWN Trigger: GTTCCAGATGATACAAAACCAAATGGAAGGAAAGTC...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CCA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTGACTTTCCTTCCATTTaGTTTTGTATCATCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TISEALQGGDRLPRLLHTDFPSI*FCIIWN Trigger: GTTCCAGATGATACAAAACCAAATGGAAGGAAAGTC...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS GCA 90 bp | ACCTGCAGGATTGCCAGGCCAGGGGTGAAGCCAGGTACCTGCTCCTaGATCCGAGTTACCTGGTTCTTCAGTCGATCCCTGATTTGCGCA | + |
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Preference number: 5 (lower is better) Translates to: TCRIARPGVKPGTCS*IRVTWFFSRSLICA Trigger: TGCGCAAATCAGGGATCGACTGAAGAACCAGGTAACTCGGATGCAGGAGCAGGTACCTGGCTTCACCCCTGGCCTGGCAATCCTGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS GCA 90 bp | TCGCCAACCTGCAGGATTGCCAGGCCAGGGGTGAAGCCAGGTACCTaGTCCTGCATCCGAGTTACCTGGTTCTTCAGTCGATCCCTGATT | + |
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Preference number: 5 (lower is better) Translates to: SPTCRIARPGVKPGT*SCIRVTWFFSRSLI Trigger: AATCAGGGATCGACTGAAGAACCAGGTAACTCGGATGCAGGAGCAGGTACCTGGCTTCACCCCTGGCCTGGCAATCCTGCAGGTTGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS TCA 90 bp | TGGAATCATCTCTGTCGCCAACCTGCAGGATTGCCAGGCCAGGGGTaGAGCCAGGTACCTGCTCCTGCATCCGAGTTACCTGGTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: WNHLCRQPAGLPGQG*SQVPAPASELPGSS Trigger: TGAAGAACCAGGTAACTCGGATGCAGGAGCAGGTACCTGGCTTCACCCCTGGCCTGGCAATCCTGCAGGTTGGCGACAGAGATGATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR CAA 90 bp | GAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGTGCTCTGCATCAGCATaGCCACGGTCATGGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: EALQGGDRLPRLLHTSSVCSASA*PRSWAP Trigger: TGGGGCCCATGACCGTGGCAATGCTGATGCAGAGCA...CACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS GCA 90 bp | TACTACGAAGCCCTCAGGGCCTACCAGCTTGAGTGCAATCCGGTCTaGAATGATGGAGGAATTCCCGTGTGCAATGTTGGCGAAAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: YYEALRAYQLECNPV*NDGGIPVCNVGERP Trigger: GGGCCTTTCGCCAACATTGCACACGGGAATTCCTCCATCATTGCAGACCGGATTGCACTCAAGCTGGTAGGCCCTGAGGGCTTCGTAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | TCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGCAGCAGCCACGAGGTaGTTAGCAGCAGTGATGGCG | + |
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Preference number: 5 (lower is better) Translates to: SEALQGGDRLPRLLHTSSAAATR*LAAVMA Trigger: CGCCATCACTGCTGCTAACAACCTCGTGGCTGCTGC...TGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCCGATTAAAGAGAGCCTaGTCTGTCTGGGTCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LFRAGTDFQDFCTLLQWARLKRA*SVWVSS Trigger: TGAGCTGACCCAGACAGACAAGGCTCTCTTTAATCG...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | CTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCGCATCTGTATCTGTCTaGAACACGTTCACAGCCACG | + |
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Preference number: 5 (lower is better) Translates to: LFRAGTDFQDFCTLLQWAASVSV*NTFTAT Trigger: CGTGGCTGTGAACGTGTTCAAGACAGATACAGATGC...GGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | AGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGTGCATGAGGTTGGGCTaGATTGCATCCTTCATCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSSGRGQTSKTSAHFFSGCMRLG*IASFIS Trigger: GCTGATGAAGGATGCAATCAAGCCCAACCTCATGCA...CCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCAGTTCCAAGCATCCCTaGGGTGTGCATGGGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFSSKHP*GVHGMK Trigger: CTTCATCCCATGCACACCCAAGGGATGCTTGGAACT...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR CAA 90 bp | CAGACTTCCAAGACTTCTGCACACTTCTTCAGTGGGCCTGAACAGACACTGGCCTGCATGAGGTTGGGCTaGATTGCATCCTTCATCAGC | + |
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Preference number: 5 (lower is better) Translates to: QTSKTSAHFFSGPEQTLACMRLG*IASFIS Trigger: GCTGATGAAGGATGCAATCAAGCCCAACCTCATGCA...GGCCAGTGTCTGTTCAGGCCCACTGAAGAAGTGTGCAGAAGTCTTGGAAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACGCATCTGTATCTGTCTaGAACACGTTCACAGCCACG | + |
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Preference number: 5 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDASVSV*NTFTAT Trigger: CGTGGCTGTGAACGTGTTCAAGACAGATACAGATGC...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | GCTTTAGGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCGATTAAAGAGAGCCTaGTCTGTCTGGGTCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: ALGKLPLFLKLFRAGTDFRLKRA*SVWVSS Trigger: TGAGCTGACCCAGACAGACAAGGCTCTCTTTAATCG...GAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCCTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | GGGAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTCCCAAAGCCCTGCTTaGTGTAAATTTCTGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: GKLPLFLKLFRAGTDFQDSQSPA*CKFLLC Trigger: ACAAAGCAGAAATTTACACAAAGCAGGGCTTTGGGA...GTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS GCA 90 bp | ATGACTGCCTCAGTGTTAATGGAATTCTCTGAATCTAAAGGCAGCTaGACTATGAATCCGTGCACAGAGGCATCCTCGTTCAGGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: MTASVLMEFSESKGS*TMNPCTEASSFREM Trigger: CATCTCCCTGAACGAGGATGCCTCTGTGCACGGATTCATAGTGCAGCTGCCTTTAGATTCAGAGAATTCCATTAACACTGAGGCAGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS-3UTR CAA 90 bp | TTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCTTCCTTTATTTACCTCCTaGTCCAGATTGGCAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FLKLFRAGTDFQDFCTLLPLFTS*SRLAVL Trigger: CAAGACTGCCAATCTGGACAAGGAGGTAAATAAAGG...AAGAAGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCCCTTTATTTACCTCCTaGTCCAGATTGGCAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFPLFTS*SRLAVL Trigger: CAAGACTGCCAATCTGGACAAGGAGGTAAATAAAGG...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | GAAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCCAGAATACCGGCACTaGATGTTGAAGAACTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: ETPTISEALQGGDRLPRLPEYRH*MLKNFS Trigger: GGAAAAGTTCTTCAACATCAAGTGCCGGTATTCTGG...AAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | AAACTCCCACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCCCAGAATACCGGCACTaGATGTTGAAGAACTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: KLPLFLKLFRAGTDFQDFPEYRH*MLKNFS Trigger: GGAAAAGTTCTTCAACATCAAGTGCCGGTATTCTGG...GAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGTGGGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS-3UTR CAA 90 bp | ACTATTTCTGAAGCTCTTCAGGGCGGGGACAGACTTCCAAGACTTCTGCACACTTCCCAAAGCCCTGCTTaGTGTAAATTTCTGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: TISEALQGGDRLPRLLHTSQSPA*CKFLLC Trigger: ACAAAGCAGAAATTTACACAAAGCAGGGCTTTGGGA...AGTGTGCAGAAGTCTTGGAAGTCTGTCCCCGCCCTGAAGAGCTTCAGAAATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS GCA 90 bp | TTAATGGAATTCTCTGAATCTAAAGGCAGCTGCACTATGAATCCGTaGACAGAGGCATCCTCGTTCAGGGAGATGACATATTTTAACACC | + |
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Preference number: 5 (lower is better) Translates to: LMEFSESKGSCTMNP*TEASSFREMTYFNT Trigger: GGTGTTAAAATATGTCATCTCCCTGAACGAGGATGCCTCTGTGCACGGATTCATAGTGCAGCTGCCTTTAGATTCAGAGAATTCCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS GCA 72 bp | ATTGCCAGGCCAGGGGTGAAGCCAGGTACCTGCTCCTaGATCCGAGTTACCTGGTTCTTCAGTCGATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: IARPGVKPGTCS*IRVTWFFSRSL Trigger: CAGGGATCGACTGAAGAACCAGGTAACTCGGATGCAGGAGCAGGTACCTGGCTTCACCCCTGGCCTGGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS GCA 72 bp | TGCAGGATTGCCAGGCCAGGGGTGAAGCCAGGTACCTaGTCCTGCATCCGAGTTACCTGGTTCTTCAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: CRIARPGVKPGT*SCIRVTWFFSR Trigger: TCGACTGAAGAACCAGGTAACTCGGATGCAGGAGCAGGTACCTGGCTTCACCCCTGGCCTGGCAATCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS CAA 72 bp | ACTGGCGTGCCCTCTAAGGTCTGCATGAGGTTGGGCTaGATTGCATCCTTCATCAGCACCGTCAGCGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TGVPSKVCMRLG*IASFISTVSAP Trigger: TGGGGCGCTGACGGTGCTGATGAAGGATGCAATCAAGCCCAACCTCATGCAGACCTTAGAGGGCACGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS GCA 72 bp | GCCCTCAGGGCCTACCAGCTTGAGTGCAATCCGGTCTaGAATGATGGAGGAATTCCCGTGTGCAATGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALRAYQLECNPV*NDGGIPVCNVG Trigger: GCCAACATTGCACACGGGAATTCCTCCATCATTGCAGACCGGATTGCACTCAAGCTGGTAGGCCCTGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021443.7 ENSMUST00000220046.2 |
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| CDS TCA 72 bp | AGTCATTTAGATCACCTCTGGCGAGCTTCCCAGCACTaGCGCTCGTCAACCCATCCACATCCTTCTCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SHLDHLWRASQH*RSSTHPHPSRV Trigger: CACCCGAGAAGGATGTGGATGGGTTGACGAGCGTCAGTGCTGGGAAGCTCGCCAGAGGTGATCTAAATGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS GCA 72 bp | TTCTCTGAATCTAAAGGCAGCTGCACTATGAATCCGTaGACAGAGGCATCCTCGTTCAGGGAGATGACATAT | + |
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Preference number: 6 (lower is better) Translates to: FSESKGSCTMNP*TEASSFREMTY Trigger: ATATGTCATCTCCCTGAACGAGGATGCCTCTGTGCACGGATTCATAGTGCAGCTGCCTTTAGATTCAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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| CDS GCA 72 bp | TCAGTGTTAATGGAATTCTCTGAATCTAAAGGCAGCTaGACTATGAATCCGTGCACAGAGGCATCCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SVLMEFSESKGS*TMNPCTEASSF Trigger: GAACGAGGATGCCTCTGTGCACGGATTCATAGTGCAGCTGCCTTTAGATTCAGAGAATTCCATTAACACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021443.7 |
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