Pregenerated sensors for MTG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039018Ensembl transcript IDs: ENSMUST00000036977.9, ENSMUST00000124253.3, ENSMUST00000211171.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCACATACACAGCACTCCTGGGGTCTCATGGTAGTAACCAGGACTaGCCAGGCTCTGATAGACAAGAGAACATAGCGCCCTTTGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: ATYTALLGSHGSNQD*PGSDRQENIAPFGA Trigger: AGCTCCAAAGGGCGCTATGTTCTCTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTGCTGTGTATGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR TCA 90 bp | TGTATAATTCCAGCACTCAAGAGGCTAAGGCAGAAGGAATGTGTTTaGGACCAGCCCAAGCCACATGATGAAACTTTGTCTGAAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: CIIPALKRLRQKECV*DQPKPHDETLSEND Trigger: GTCATTTTCAGACAAAGTTTCATCATGTGGCTTGGGCTGGTCTCAAACACATTCCTTCTGCCTTAGCCTCTTGAGTGCTGGAATTATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR CAA 90 bp | AGGTGCTGCCGCCTCAGGGAGTTGATGAGGGAGGATTTGCCTACATaGGGGACACCGACCACCATGATGCAGTATTCTGGGGTCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: RCCRLRELMREDLPT*GTPTTMMQYSGVSA Trigger: AGCCGAGACCCCAGAATACTGCATCATGGTGGTCGGTGTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| 3UTR CAA 90 bp | CCTGTCCTGAGGTGCTGCCGCCTCAGGGAGTTGATGAGGGAGGATTaGCCTACATTGGGGACACCGACCACCATGATGCAGTATTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PVLRCCRLRELMRED*PTLGTPTTMMQYSG Trigger: CCCAGAATACTGCATCATGGTGGTCGGTGTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCACCTCAGGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGGAACATAGCGCCCTTTaGAGCTGGGGCCTGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HSWGLMVVTRTDQALIDKEHSAL*SWGLSL Trigger: GAGGCTCAGGCCCCAGCTCCAAAGGGCGCTATGTTC...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR-3UTR TCA 90 bp | AACCTCCTGACCAAGCCACATACACAGCACTCCTGGGGTCTCATGGTAGTAACCTTTGGAGCTGGGGCCTaGGCCTCAGTTACCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: NLLTKPHTQHSWGLMVVTFGAGA*ASVTST Trigger: TGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAA...GGTTACTACCATGAGACCCCAGGAGTGCTGTGTATGTGGCTTGGTCAGGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR-3UTR CCA 90 bp | ACACAGCACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAAGAGAGCTTCTGAACTaGAGGAACAGTCCTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TQHSWGLMVVTRTDQALIRELLN*RNSPKH Trigger: ATGCTTAGGACTGTTCCTCCAGTTCAGAAGCTCTCT...TATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTGCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGTGTTTGAGACCAGCCCAAGCCACATGATGAAACTTTGTCTGAAAATGAGCGCCCTTTGGAGCTaGGGCCTGAGCCTCAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: RNVFETSPSHMMKLCLKMSALWS*GLSLSY Trigger: GTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCT...CATTTTCAGACAAAGTTTCATCATGTGGCTTGGGCTGGTCTCAAACACATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGAGGTGCTGCCGCCTCAGGGAGTTGATGAGGGAGGATTTGCCTACATTGCAGTTCCATGACTTTTaGGACAATCTGCTTGATGTT | + |
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Preference number: 2 (lower is better) Translates to: VLRCCRLRELMREDLPTLQFHDF*DNLLDV Trigger: AACATCAAGCAGATTGTCCCAAAAGTCATGGAACTG...CAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCACCTCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| 3UTR TCA 72 bp | ACAGCACTCCTGGGGTCTCATGGTAGTAACCAGGACTaGCCAGGCTCTGATAGACAAGAGAACATAGCGCCC | + |
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Preference number: 3 (lower is better) Translates to: TALLGSHGSNQD*PGSDRQENIAP Trigger: GGGCGCTATGTTCTCTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR CCA 72 bp | GAAAACCTCCTGACCAAGCCACATACACAGCACTCCTaGGGTCTCATGGTAGTAACCAGGACTGACCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: ENLLTKPHTQHS*GLMVVTRTDQA Trigger: AGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTGCTGTGTATGTGGCTTGGTCAGGAGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR TCA 72 bp | AGCATTTGTCTCTTACTTGAGATGGAGAAAACCTCCTaGCCAAGCCACATACACAGCACTCCTGGGGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: SICLLLEMEKTS*PSHIHSTPGVS Trigger: TGAGACCCCAGGAGTGCTGTGTATGTGGCTTGGTCAGGAGGTTTTCTCCATCTCAAGTAAGAGACAAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR GCA 90 bp | TTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGCTTCTGAACTGGAGCCGGACGGCACCCCATaGCTGCGGCCACAGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LELGPEPQLPAQRASELEPDGTP*LRPQPH Trigger: ATGAGGCTGTGGCCGCAGGCATGGGGTGCCGTCCGG...CTCCAGTTCAGAAGCTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR GCA 90 bp | AGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGCTTCTGAACTGGAGGAACCCTGTCCTGAGGTGCTaGCGCCTCAGGGAGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: SWGLSLSYQHRELLNWRNPVLRC*RLRELM Trigger: CATCAACTCCCTGAGGCGGCAGCACCTCAGGACAGG...GTTCCTCCAGTTCAGAAGCTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CCA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGCGGTCCAGCATCACCTaGCCCAACAGCCCACTGCGG | + |
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Preference number: 4 (lower is better) Translates to: HSWGLMVVTRTDQALIDKRSSIT*PNSPLR Trigger: CCGCAGTGGGCTGTTGGGCCAGGTGATGCTGGACCG...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR TCA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGCAGCTTTTCCTGTCCTaGGGTGCTGCCGCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HSWGLMVVTRTDQALIDKQLFLS*GAAASG Trigger: CCCTGAGGCGGCAGCACCTCAGGACAGGAAAAGCTG...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CCA 90 bp | CCTGAGGTGCTGCCGCCTCAGGGAGTTGATGAGGGAGGATTTGCCTACATTGGGCTGGACAATTTTCCTTaGCCATGTGGCCGGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: PEVLPPQGVDEGGFAYIGLDNFP*PCGRGT Trigger: GGTTCCCCGGCCACATGGCCAAGGAAAATTGTCCAG...CCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCACCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| CDS-3UTR CCA 90 bp | CATAGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGCTTAGACCAAGCAGCTCTTaGAACAGAGGGTTTCGACCT | + |
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Preference number: 4 (lower is better) Translates to: HSALWSWGLSLSYQHRELRPSSS*NRGFRP Trigger: AGGTCGAAACCCTCTGTTCCAAGAGCTGCTTGGTCT...AAGCTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR CAA 72 bp | CGCCTCAGGGAGTTGATGAGGGAGGATTTGCCTACATaGGGGACACCGACCACCATGATGCAGTATTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RLRELMREDLPT*GTPTTMMQYSG Trigger: CCCAGAATACTGCATCATGGTGGTCGGTGTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| CDS-3UTR CCA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGTCTTCTTTAGTCCCTTaGCCATGTGGCCGGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: HSWGLMVVTRTDQALIDKSSLVP*PCGRGT Trigger: GGTTCCCCGGCCACATGGCCAAGGGACTAAAGAAGA...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CCA 90 bp | AGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGCTTCTGAACTGGAGGAACGGAGATAATCGGCCATaGTCTCTTCCCCAACAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SWGLSLSYQHRELLNWRNGDNRP*SLPQQG Trigger: ACCTTGTTGGGGAAGAGACCATGGCCGATTATCTCC...GTTCCTCCAGTTCAGAAGCTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR TCA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGATGTCACAGCTCTTGTaGTTCCTGGCTCACCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HSWGLMVVTRTDQALIDKMSQLL*FLAHLP Trigger: TGGGAGGTGAGCCAGGAATCACAAGAGCTGTGACAT...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR GCA 90 bp | GAACATAGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGTGGACAATTTTCTGCTaGTCTGTAAGATCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: EHSALWSWGLSLSYQHREWTIFC*SVRSAK Trigger: CTTGGCAGATCTTACAGAGCAGCAGAAAATTGTCCA...CTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCTATGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CCA 90 bp | AGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGCTTCTGTTTTCTTCTAAGCGCTaGACAATTTTCTGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SALWSWGLSLSYQHRELLFSSKR*TIFCCS Trigger: AGAGCAGCAGAAAATTGTCCAGCGCTTAGAAGAAAA...CAGAAGCTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR GCA 90 bp | AACCTCCTGACCAAGCCACATACACAGCACTCCTGGGGTCTCATGGTAGTAACCCGCTGGACAATTTTCTaGTGCTCTGTAAGATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NLLTKPHTQHSWGLMVVTRWTIF*CSVRSA Trigger: GGCAGATCTTACAGAGCAGCAGAAAATTGTCCAGCG...GGTTACTACCATGAGACCCCAGGAGTGCTGTGTATGTGGCTTGGTCAGGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR GCA 90 bp | AGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGCTTCTGACTTTTGGGACAATCTaGTTGATGTTTTCATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SALWSWGLSLSYQHRELLTFGTI*LMFSSF Trigger: GAAAGATGAAAACATCAAGCAGATTGTCCCAAAAGT...CAGAAGCTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CCA 90 bp | AGGAATGTGTTTGAGACCAGCCCAAGCCACATGATGAAACTTTGTCTGAAAATGAGCTCTTGTGATTCCTaGCTCACCTCCCACTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RNVFETSPSHMMKLCLKMSSCDS*LTSHSG Trigger: GCCAGAGTGGGAGGTGAGCCAGGAATCACAAGAGCT...CATTTTCAGACAAAGTTTCATCATGTGGCTTGGGCTGGTCTCAAACACATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR GCA 90 bp | GTGTTTGAGACCAGCCCAAGCCACATGATGAAACTTTGTCTGAAAATGACAAAACCACCGACTTCAGACTaGTCTGCATCTTCTTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: VFETSPSHMMKLCLKMTKPPTSD*SASSLV Trigger: GACTAAAGAAGATGCAGAGCAGTCTGAAGTCGGTGG...TTTTGTCATTTTCAGACAAAGTTTCATCATGTGGCTTGGGCTGGTCTCAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| 3UTR CAA 72 bp | AACTTAGACTCCTCTGAGATAGCATTTGTCTCTTACTaGAGATGGAGAAAACCTCCTGACCAAGCCACATAC | + |
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Preference number: 4 (lower is better) Translates to: NLDSSEIAFVSY*RWRKPPDQATY Trigger: GTATGTGGCTTGGTCAGGAGGTTTTCTCCATCTCAAGTAAGAGACAAATGCTATCTCAGAGGAGTCTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR GCA 90 bp | GTGTTTGAGACCAGCCCAAGCCACATGATGAAACTTTGTCTGAAAATGACAAAACTGCTCTGTAAGATCTaGCAAGTCCATTTTGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VFETSPSHMMKLCLKMTKLLCKI*QVHFVE Trigger: CTCAACAAAATGGACTTGGCAGATCTTACAGAGCAG...TTTTGTCATTTTCAGACAAAGTTTCATCATGTGGCTTGGGCTGGTCTCAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR TCA 90 bp | GTGTTTGAGACCAGCCCAAGCCACATGATGAAACTTTGTCTGAAAATGACAAAATTGGGACAATCTGCTTaGTGTTTTCATCTTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: VFETSPSHMMKLCLKMTKLGQSA*CFHLSH Trigger: GTGTGAAAGATGAAAACATCAAGCAGATTGTCCCAA...TTTTGTCATTTTCAGACAAAGTTTCATCATGTGGCTTGGGCTGGTCTCAAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CCA 90 bp | GTGTTTGAGACCAGCCCAAGCCACATGATGAAACTTTGTCTGAAAATGACAAAACAGTTCCATGACTTTTaGGACAATCTGCTTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: VFETSPSHMMKLCLKMTKQFHDF*DNLLDV Trigger: AACATCAAGCAGATTGTCCCAAAAGTCATGGAACTG...TTTTGTCATTTTCAGACAAAGTTTCATCATGTGGCTTGGGCTGGTCTCAAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS TCA 90 bp | TTTAGTCCCTTGGCCATGTGGCCGGGGAACCAGCGTGCTACATCGTaGCCTTGCAGAGGGAAGCACTCGCGCCAAGCGCCCCGGACGGCA | + |
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Preference number: 5 (lower is better) Translates to: FSPLAMWPGNQRATS*PCRGKHSRQAPRTA Trigger: TGCCGTCCGGGGCGCTTGGCGCGAGTGCTTCCCTCTGCAAGGTCACGATGTAGCACGCTGGTTCCCCGGCCACATGGCCAAGGGACTAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS GCA 90 bp | AAGCGCTGGACAATTTTCCTTGGCCATGTGGCCGGGGAACCAGCGTaGTACATCGTGACCTTGCAGAGGGAAGCACTCGCGCCAAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: KRWTIFLGHVAGEPA*YIVTLQREALAPSA Trigger: GGCGCTTGGCGCGAGTGCTTCCCTCTGCAAGGTCACGATGTAGCACGCTGGTTCCCCGGCCACATGGCCAAGGAAAATTGTCCAGCGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| CDS-3UTR CAA 90 bp | GAACATAGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGTGCCGCCTCAGGGAGTaGATGAGGGAGGATTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: EHSALWSWGLSLSYQHRECRLRE*MREDLP Trigger: AGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCA...CTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCTATGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS GCA 90 bp | CTGGCCCAACAGCCCACTGCGGAAGGTCCGGAGGAAGTCTCGGGCTaGCATGGCATAATCAGGCTGGATAACATTGACATTACCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LAQQPTAEGPEEVSG*HGIIRLDNIDITCA Trigger: GGCACAGGTAATGTCAATGTTATCCAGCCTGATTATGCCATGGCAGCCCGAGACTTCCTCCGGACCTTCCGCAGTGGGCTGTTGGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CAA 90 bp | CATAGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGCTTTTGATGAGGGAGGATTaGCCTACATTGGGGACACCG | + |
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Preference number: 5 (lower is better) Translates to: HSALWSWGLSLSYQHRELLMRED*PTLGTP Trigger: CGGTGTCCCCAATGTAGGCAAATCCTCCCTCATCAA...AAGCTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CAA 90 bp | CTCAGGGAGTTGATGAGGGAGGATTTGCCTACATTGGGGACACCGACCACCATGGCTGGACAATTTTCCTaGGCCATGTGGCCGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: LRELMREDLPTLGTPTTMAGQFS*AMWPGN Trigger: GTTCCCCGGCCACATGGCCAAGGAAAATTGTCCAGC...CATGGTGGTCGGTGTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| CDS-3UTR CAA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGATCTTCTTTAGTCCCTaGGCCATGTGGCCGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: HSWGLMVVTRTDQALIDKIFFSP*AMWPGN Trigger: GTTCCCCGGCCACATGGCCAAGGGACTAAAGAAGAT...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CAA 90 bp | GAACATAGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGTCTGCCAAGTCCATTTaGTTGAGGACAAGCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: EHSALWSWGLSLSYQHRESAKSI*LRTSRC Trigger: GCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGA...CTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCTATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CAA 90 bp | GAACATAGCGCCCTTTGGAGCTGGGGCCTGAGCCTCAGTTACCAGCACAGAGAGTCAGGCTGGATAACATaGACATTACCTGTGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: EHSALWSWGLSLSYQHRESGWIT*TLPVPV Trigger: CACAGGCACAGGTAATGTCAATGTTATCCAGCCTGA...CTCTCTGTGCTGGTAACTGAGGCTCAGGCCCCAGCTCCAAAGGGCGCTATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS TCA 90 bp | TGGCCAGGGCATAGTGCTGCACATACCCAAAGAGCCCATGCCTGTTaGGGGTGTAAAGGAGATAATCGGCCATGGTCTCTTCCCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: WPGHSAAHTQRAHAC*GCKGDNRPWSLPQQ Trigger: TTGTTGGGGAAGAGACCATGGCCGATTATCTCCTTTACACCCTCAACAGGCATGGGCTCTTTGGGTATGTGCAGCACTATGCCCTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CCA 90 bp | AATCCGAGGAGCCAGCACCCCAGGAGTATCCAGCAAGAATACCAGTaGACGCTCACATACCTGGATTCTGGATGTCACAGCTCTTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: NPRSQHPRSIQQEYQ*TLTYLDSGCHSSCD Trigger: ATCACAAGAGCTGTGACATCCAGAATCCAGGTATGTGAGCGTCCACTGGTATTCTTGCTGGATACTCCTGGGGTGCTGGCTCCTCGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CAA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGGCCAAGTCCATTTTGTaGAGGACAAGCAGATGCGGT | + |
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Preference number: 5 (lower is better) Translates to: HSWGLMVVTRTDQALIDKAKSIL*RTSRCG Trigger: ACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGC...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS GCA 90 bp | TGCTCTGTAAGATCTGCCAAGTCCATTTTGTTGAGGACAAGCAGATaGGGTTTCAGACCAAGCAGCTCTTGGAACAGAGGGTTTCGACCT | + |
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Preference number: 5 (lower is better) Translates to: CSVRSAKSILLRTSR*GFRPSSSWNRGFRP Trigger: AGGTCGAAACCCTCTGTTCCAAGAGCTGCTTGGTCTGAAACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGATCTTACAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CCA 90 bp | GGCTCGATGGTAGCGGTAGCTGCACCTGATCAGTTCCATGACTTTTaGGACAATCTGCTTGATGTTTTCATCTTTCACACAGTTCGTGAA | + |
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Preference number: 5 (lower is better) Translates to: GSMVAVAAPDQFHDF*DNLLDVFIFHTVRE Trigger: TTCACGAACTGTGTGAAAGATGAAAACATCAAGCAGATTGTCCCAAAAGTCATGGAACTGATCAGGTGCAGCTACCGCTACCATCGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS-3UTR CAA 90 bp | CACTCCTGGGGTCTCATGGTAGTAACCAGGACTGACCAGGCTCTGATAGACAAGTTTGGGACAATCTGCTaGATGTTTTCATCTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: HSWGLMVVTRTDQALIDKFGTIC*MFSSFT Trigger: TGTGAAAGATGAAAACATCAAGCAGATTGTCCCAAA...CTTGTCTATCAGAGCCTGGTCAGTCCTGGTTACTACCATGAGACCCCAGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 72 bp | CATGTGGCCGGGGAACCAGCGTGCTACATCGTGACCTaGCAGAGGGAAGCACTCGCGCCAAGCGCCCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: HVAGEPACYIVT*QREALAPSAPD Trigger: GTCCGGGGCGCTTGGCGCGAGTGCTTCCCTCTGCAAGGTCACGATGTAGCACGCTGGTTCCCCGGCCACATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036977.9 ENSMUST00000211171.2 |
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| CDS GCA 72 bp | TGTCACGGTCCAGCATCACCTGGCCCAACAGCCCACTaGGGAAGGTCCGGAGGAAGTCTCGGGCTGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: CHGPASPGPTAH*GRSGGSLGLPW Trigger: CCATGGCAGCCCGAGACTTCCTCCGGACCTTCCGCAGTGGGCTGTTGGGCCAGGTGATGCTGGACCGTGACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS GCA 72 bp | CCTCCCACTCTGGCAGCTTTTCCTGTCCTGAGGTGCTaGCGCCTCAGGGAGTTGATGAGGGAGGATTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PPTLAAFPVLRC*RLRELMREDLP Trigger: AGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCACCTCAGGACAGGAAAAGCTGCCAGAGTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CCA 72 bp | CAGCAAGCAGGTATAATGTCACGGTCCAGCATCACCTaGCCCAACAGCCCACTGCGGAAGGTCCGGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QQAGIMSRSSIT*PNSPLRKVRRK Trigger: CTTCCTCCGGACCTTCCGCAGTGGGCTGTTGGGCCAGGTGATGCTGGACCGTGACATTATACCTGCTTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 90 bp | ACTCTGGCAGCTTTTCCTGTCCTGAGGTGCTGCCGCCTCAGGGAGTaGATGAGGGAGGATTTGCCTACATTGGGGACACCGACCACCATG | + |
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Preference number: 6 (lower is better) Translates to: TLAAFPVLRCCRLRE*MREDLPTLGTPTTM Trigger: CATGGTGGTCGGTGTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCACCTCAGGACAGGAAAAGCTGCCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS GCA 72 bp | ACAATTTTCCTTGGCCATGTGGCCGGGGAACCAGCGTaGTACATCGTGACCTTGCAGAGGGAAGCACTCGCG | + |
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Preference number: 6 (lower is better) Translates to: TIFLGHVAGEPA*YIVTLQREALA Trigger: CGCGAGTGCTTCCCTCTGCAAGGTCACGATGTAGCACGCTGGTTCCCCGGCCACATGGCCAAGGAAAATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211171.2 |
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| CDS CCA 72 bp | CGTTCTTCAGCACCCACTCTATTTGGTCACAGGCGCTaGCCAGGGCATAGTGCTGCACATACCCAAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RSSAPTLFGHRR*PGHSAAHTQRA Trigger: GGCTCTTTGGGTATGTGCAGCACTATGCCCTGGCCAGCGCCTGTGACCAAATAGAGTGGGTGCTGAAGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 72 bp | CAGCTTGATAGCCACGTTCTTCAGCACCCACTCTATTaGGTCACAGGCGCTGGCCAGGGCATAGTGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: QLDSHVLQHPLY*VTGAGQGIVLH Trigger: GTGCAGCACTATGCCCTGGCCAGCGCCTGTGACCAAATAGAGTGGGTGCTGAAGAACGTGGCTATCAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS GCA 72 bp | CAGCCCACTGCGGAAGGTCCGGAGGAAGTCTCGGGCTaGCATGGCATAATCAGGCTGGATAACATTGACATT | + |
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Preference number: 6 (lower is better) Translates to: QPTAEGPEEVSG*HGIIRLDNIDI Trigger: AATGTCAATGTTATCCAGCCTGATTATGCCATGGCAGCCCGAGACTTCCTCCGGACCTTCCGCAGTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 90 bp | CGTCTTCCTCAGCTTGATAGCCACGTTCTTCAGCACCCACTCTATTaGGTCACAGGCGCTGGCCAGGGCATAGTGCTGCACATACCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RLPQLDSHVLQHPLY*VTGAGQGIVLHIPK Trigger: TTTGGGTATGTGCAGCACTATGCCCTGGCCAGCGCCTGTGACCAAATAGAGTGGGTGCTGAAGAACGTGGCTATCAAGCTGAGGAAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS GCA 72 bp | ACCTCGATAACACAATCCACCGACTTCAGACTGCTCTaGATCTTCTTTAGTCCCTTGGCCATGTGGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: TSITQSTDFRLL*IFFSPLAMWPG Trigger: CCCCGGCCACATGGCCAAGGGACTAAAGAAGATGCAGAGCAGTCTGAAGTCGGTGGATTGTGTTATCGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CCA 72 bp | TACCTGGATTCTGGATGTCACAGCTCTTGTGATTCCTaGCTCACCTCCCACTCTGGCAGCTTTTCCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: YLDSGCHSSCDS*LTSHSGSFSCP Trigger: AGGACAGGAAAAGCTGCCAGAGTGGGAGGTGAGCCAGGAATCACAAGAGCTGTGACATCCAGAATCCAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 90 bp | TTACCTGTGCCTGTGAGAACCTTCACTTTCCGCGTCTTCCTCAGCTaGATAGCCACGTTCTTCAGCACCCACTCTATTTGGTCACAGGCG | + |
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Preference number: 6 (lower is better) Translates to: LPVPVRTFTFRVFLS*IATFFSTHSIWSQA Trigger: CGCCTGTGACCAAATAGAGTGGGTGCTGAAGAACGTGGCTATCAAGCTGAGGAAGACGCGGAAAGTGAAGGTTCTCACAGGCACAGGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS TCA 72 bp | CAGACCAAGCAGCTCTTGGAACAGAGGGTTTCGACCTaGAAATGGGATCCTGGCGTCATGAACCTCGATAAC | + |
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Preference number: 6 (lower is better) Translates to: QTKQLLEQRVST*KWDPGVMNLDN Trigger: GTTATCGAGGTTCATGACGCCAGGATCCCATTTTCAGGTCGAAACCCTCTGTTCCAAGAGCTGCTTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036977.9 ENSMUST00000124253.3 |
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| CDS CCA 72 bp | AGGACAAGCAGATGCGGTTTCAGACCAAGCAGCTCTTaGAACAGAGGGTTTCGACCTGAAAATGGGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: RTSRCGFRPSSS*NRGFRPENGIL Trigger: CAGGATCCCATTTTCAGGTCGAAACCCTCTGTTCCAAGAGCTGCTTGGTCTGAAACCGCATCTGCTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036977.9 ENSMUST00000124253.3 |
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| CDS GCA 72 bp | AGATCTGCCAAGTCCATTTTGTTGAGGACAAGCAGATaGGGTTTCAGACCAAGCAGCTCTTGGAACAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RSAKSILLRTSR*GFRPSSSWNRG Trigger: CCCTCTGTTCCAAGAGCTGCTTGGTCTGAAACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 90 bp | CGCTGGACAATTTTCTGCTGCTCTGTAAGATCTGCCAAGTCCATTTaGTTGAGGACAAGCAGATGCGGTTTCAGACCAAGCAGCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RWTIFCCSVRSAKSI*LRTSRCGFRPSSSW Trigger: CCAAGAGCTGCTTGGTCTGAAACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGATCTTACAGAGCAGCAGAAAATTGTCCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 72 bp | TTCTGCTGCTCTGTAAGATCTGCCAAGTCCATTTTGTaGAGGACAAGCAGATGCGGTTTCAGACCAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: FCCSVRSAKSIL*RTSRCGFRPSS Trigger: GCTGCTTGGTCTGAAACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGATCTTACAGAGCAGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 90 bp | TGGACAATTTTCTGCTGCTCTGTAAGATCTGCCAAGTCCATTTTGTaGAGGACAAGCAGATGCGGTTTCAGACCAAGCAGCTCTTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: WTIFCCSVRSAKSIL*RTSRCGFRPSSSWN Trigger: GTTCCAAGAGCTGCTTGGTCTGAAACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGATCTTACAGAGCAGCAGAAAATTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CAA 72 bp | ATTTTCTGCTGCTCTGTAAGATCTGCCAAGTCCATTTaGTTGAGGACAAGCAGATGCGGTTTCAGACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: IFCCSVRSAKSI*LRTSRCGFRPS Trigger: GCTTGGTCTGAAACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGATCTTACAGAGCAGCAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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| CDS CCA 72 bp | GTAGCGGTAGCTGCACCTGATCAGTTCCATGACTTTTaGGACAATCTGCTTGATGTTTTCATCTTTCACACA | + |
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Preference number: 6 (lower is better) Translates to: VAVAAPDQFHDF*DNLLDVFIFHT Trigger: TGTGTGAAAGATGAAAACATCAAGCAGATTGTCCCAAAAGTCATGGAACTGATCAGGTGCAGCTACCGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036977.9 |
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