Pregenerated sensors for MTFR1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046671Ensembl transcript IDs: ENSMUST00000102550.10, ENSMUST00000116279.10, ENSMUST00000131613.8, ENSMUST00000146808.2, ENSMUST00000154769.8
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCAGCTCTTCTCTTCTAGCCCAAGCCCTAGTCAGCAAGACGGTTaGAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATT | + |
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Preference number: 1 (lower is better) Translates to: IQLFSSSPSPSQQDG*RSRRQTSAVRKAAI Trigger: AATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACTAGGGCTTGGGCTAGAAGAGAAGAGCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR TCA 90 bp | TTGCAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTaGAGTTCAGGAGCAAGAGACAGTTTGCAGTCAGTGCTGTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: LQISETDICGEEGSY*SSGARDSLQSVLSV Trigger: AACTGACAGCACTGACTGCAAACTGTCTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGAGAGCCACAGCTGTGCACGTGTCCAGCGAGACCAATTATGGAGACTACTGCAGGGAAGCTGCTaGGAGCCACAGCTGTGCACG | + |
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Preference number: 2 (lower is better) Translates to: AAESHSCARVQRDQLWRLLQGSC*EPQLCT Trigger: CGTGCACAGCTGTGGCTCTCAGCAGCTTCCCTGCAG...TAGTCTCCATAATTGGTCTCGCTGGACACGTGCACAGCTGTGGCTCTCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGACGGTTGCAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATGACAGACATCTGCGGTaGGGAAGGCAGCTATTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ARRLQISETDICGEEGSYDRHLR*GRQLLK Trigger: CTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTC...ATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTAGAGGGGAAGGGTGACTaGTGGGCACTGGGGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FQSVELRRPWRVDQVVVLEGKGD*WALGQV Trigger: GACCTGCCCCAGTGCCCAGCAGTCACCCTTCCCCTC...TAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGAGAGCCACAGCTGTGCACGTGTCCAGCGAGACCAATTATGGAGACTAGAGGAAGGCAGCTATTaGAGTTCAGGAGCAAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: AAESHSCARVQRDQLWRLEEGSY*SSGARD Trigger: GTCTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTC...TAGTCTCCATAATTGGTCTCGCTGGACACGTGCACAGCTGTGGCTCTCAGCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGACGGTTGCAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATATAGACCTTGGCTCCTaGCAAGGCTTAAGTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ARRLQISETDICGEEGSYIDLGS*QGLSAG Trigger: TCCTGCACTTAAGCCTTGGCAGGAGCCAAGGTCTAT...ATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGAGAGCCACAGCTGTGCACGTGTCCAGCGAGACCAATTATGGAGACTAATAGACCTTGGCTCCTaGCAAGGCTTAAGTGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AAESHSCARVQRDQLWRLIDLGS*QGLSAG Trigger: TCCTGCACTTAAGCCTTGGCAGGAGCCAAGGTCTAT...TAGTCTCCATAATTGGTCTCGCTGGACACGTGCACAGCTGTGGCTCTCAGCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCAGTCAGCAAGACGGTTaGAGATCTCGGAGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: DGAAEDLPVNMNINGRSPSQQDG*RSRRQT Trigger: TGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACT...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGACGGTTGCAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATCTGCCAAGGCTTAAGTaGAGGAAACAGCGAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: ARRLQISETDICGEEGSYLPRLK*RKQRVI Trigger: GATTACTCGCTGTTTCCTGCACTTAAGCCTTGGCAG...ATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGGCAGGTCTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAGTCAGCAAGACGGTTaGAGATCTCGGAGACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: TGAGLGWSSRRPSCEHEHSQQDG*RSRRQT Trigger: TGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACT...ATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAGACCTGCCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTAGCCCAAGCCCTAGTCAGCAAGACGGTTGCAGATCTCGGAGACAGACACTGCCAAGGCTTAAGTaGAGGAAACAGCGAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: SSSPSPSQQDGCRSRRQTLPRLK*RKQRVI Trigger: GATTACTCGCTGTTTCCTGCACTTAAGCCTTGGCAG...TGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACTAGGGCTTGGGCTAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTAGCCCAAGCCCTAGTCAGCAAGACGGTTGCAGATCTCGGAGACAGACAGAGCAAGAGACAGTTTaGAGTCAGTGCTGTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SSSPSPSQQDGCRSRRQTEQETV*SQCCQF Trigger: GAACTGACAGCACTGACTGCAAACTGTCTCTTGCTC...TGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACTAGGGCTTGGGCTAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCTCTGTTTTATCCGGTaGAAATCCTTCAGGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: LGWSSRRPSCEHEHKWPLLCFIR*KSFRMP Trigger: GGGCATCCTGAAGGATTTTCACCGGATAAAACAGAG...GAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCAGCCCAGATGTTGGCTaGTCCAGTGGCCTGGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFSPDVG*SSGLDS Trigger: AGAGTCCAGGCCACTGGACCAGCCAACATCTGGGCT...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTAGAGGAAGGCAGCTATTaGAGTTCAGGAGCAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FQSVELRRPWRVDQVVVLEEGSY*SSGARD Trigger: GTCTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTC...TAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGGCAGGTCTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATACAGTTTGCAGTCAGTaGTGTCAGTTCCCTTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TGAGLGWSSRRPSCEHEHTVCSQ*CQFPFL Trigger: TAGAAAAGGGAACTGACAGCACTGACTGCAAACTGT...ATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAGACCTGCCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCGACAGACATCTGCGGTaGGGAAGGCAGCTATTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFDRHLR*GRQLLK Trigger: CTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTC...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCGAGGAAGGCAGCTATTaGAGTTCAGGAGCAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFEEGSY*SSGARD Trigger: GTCTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTC...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAAAGTCAGCAAGACGGTTaGAGATCTCGGAGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: ADTLHSTQLSVTNASSQKSQQDG*RSRRQT Trigger: TGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACT...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR CCA 72 bp | AGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATaGCCGCTCCCCCTTAGCCCAGTGGCGCTGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SSRRPSCEHEHK*PLPLSPVALQG Trigger: TCCCTGCAGCGCCACTGGGCTAAGGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR GCA 72 bp | TTCTCTTCTAGCCCAAGCCCTAGTCAGCAAGACGGTTaGAGATCTCGGAGACAGACATCTGCGGTGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: FSSSPSPSQQDG*RSRRQTSAVRK Trigger: CTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACTAGGGCTTGGGCTAGAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR-3UTR CAA 90 bp | GCAAGACGGTTGCAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATGGAGCAAGAGACAGTTaGCAGTCAGTGCTGTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: ARRLQISETDICGEEGSYGARDS*QSVLSV Trigger: AACTGACAGCACTGACTGCAAACTGTCTCTTGCTCC...ATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
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| 3UTR TCA 72 bp | TCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTaGAGTTCAGGAGCAAGAGACAGTTTGCAGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SETDICGEEGSY*SSGARDSLQSV Trigger: CACTGACTGCAAACTGTCTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR TCA 72 bp | AAGACGGTTGCAGATCTCGGAGACAGACATCTGCGGTaGGGAAGGCAGCTATTGAAGTTCAGGAGCAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: KTVADLGDRHLR*GRQLLKFRSKR Trigger: TCTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| 3UTR GCA 72 bp | AAAAACCATAGACCTTGGCTCCTGCCAAGGCTTAAGTaGAGGAAACAGCGAGTAATCCAGCTCTTCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: KNHRPWLLPRLK*RKQRVIQLFSS Trigger: AGAAGAGAAGAGCTGGATTACTCGCTGTTTCCTGCACTTAAGCCTTGGCAGGAGCCAAGGTCTATGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR TCA 90 bp | CGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTGAAGTTCAGGAGCAAGAGGGCTGCGCAGGTGGCTaGGCTCATCCTGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RRQTSAVRKAAIEVQEQEGCAGG*AHPAAQ Trigger: CTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCC...CTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR TCA 90 bp | GATGTCTTCTTCCTTCAGGGCAAACTTCCTCCTGAGGACCTCAGAGATGAGGACGGCTGCGCAGGTGGCTaGGCTCATCCTGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DVFFLQGKLPPEDLRDEDGCAGG*AHPAAQ Trigger: CTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCC...GTCCTCATCTCTGAGGTCCTCAGGAGGAAGTTTGCCCTGAAGGAAGAAGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
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| CDS-3UTR TCA 90 bp | CTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCGGCTGCGCAGGTGGCTaGGCTCATCCTGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LGWSSRRPSCEHEHKWPLGCAGG*AHPAAQ Trigger: CTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCC...GAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTAGCCCAAGCCCTAGTCAGCAAGACGGTTGCAGATCTCGGAGACAGACAATCTGGCTGCGCAGGTaGCTGAGCTCATCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSPSPSQQDGCRSRRQTIWLRR*LSSSCS Trigger: GCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGAT...TGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACTAGGGCTTGGGCTAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CCA 90 bp | GATGTCTTCTTCCTTCAGGGCAAACTTCCTCCTGAGGACCTCAGAGATGAGGACATCTGGCTGCGCAGGTaGCTGAGCTCATCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DVFFLQGKLPPEDLRDEDIWLRR*LSSSCS Trigger: GCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGAT...GTCCTCATCTCTGAGGTCCTCAGGAGGAAGTTTGCCCTGAAGGAAGAAGACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | GCTGCTGAGAGCCACAGCTGTGCACGTGTCCAGCGAGACCAATTATGGAGACTATCATGTCTGCAAAGCTaGTGGCCTTGGACAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: AAESHSCARVQRDQLWRLSCLQS*WPWTER Trigger: TCTCTCTGTCCAAGGCCAGCAGCTTTGCAGACATGA...TAGTCTCCATAATTGGTCTCGCTGGACACGTGCACAGCTGTGGCTCTCAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | GCAAGACGGTTGCAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTCATGTCTGCAAAGCTaGTGGCCTTGGACAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ARRLQISETDICGEEGSYSCLQS*WPWTER Trigger: TCTCTCTGTCCAAGGCCAGCAGCTTTGCAGACATGA...ATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CCA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCTGCAACACTCAGGGCTaGCAGAACAAAGTAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: DGAAEDLPVNMNINGRSPCNTQG*QNKVGG Trigger: TCCCCCTACTTTGTTCTGCCAGCCCTGAGTGTTGCA...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | TTTCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATGGCTGAGCTCATCCTaGAGCTCAGTGGTGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FQSVELRRPWRVDQVVVLWLSSS*SSVVRL Trigger: GAGCCGCACCACTGAGCTGCAGGATGAGCTCAGCCA...TAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR TCA 90 bp | CGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTGAAGTTCAGGAGCAAGAGGTCATCCTCTTCAGATaGGCTGCAGGTAGTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RRQTSAVRKAAIEVQEQEVILFR*AAGSFV Trigger: CACAAAACTACCTGCAGCTCATCTGAAGAGGATGAC...CTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | GCTGCTGAGAGCCACAGCTGTGCACGTGTCCAGCGAGACCAATTATGGAGACTACCATGTGGCTTGTTTTaGCAGATTGGGATAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: AAESHSCARVQRDQLWRLPCGLF*QIGIVT Trigger: TGTGACTATCCCAATCTGGCAAAACAAGCCACATGG...TAGTCTCCATAATTGGTCTCGCTGGACACGTGCACAGCTGTGGCTCTCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | CTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCGATGCCCATCATGTCTaGAAAGCTGCTGGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LGWSSRRPSCEHEHKWPLDAHHV*KAAGLG Trigger: TCCAAGGCCAGCAGCTTTGCAGACATGATGGGCATC...GAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
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| CDS-3UTR CCA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCGCTTCAGGGGGAGATTaGTCCCAATTCTTCTTACCA | + |
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Preference number: 4 (lower is better) Translates to: DGAAEDLPVNMNINGRSPASGGD*SQFFLP Trigger: TGGTAAGAAGAATTGGGACCAATCTCCCCCTGAAGC...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CCA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCAGCCAGAGTAGGGACTaGAGGGACATCTTTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: DGAAEDLPVNMNINGRSPSQSRD*RDIFQT Trigger: TGTTTGAAAGATGTCCCTCCAGTCCCTACTCTGGCT...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | CGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTGAAGTTCAGGAGCAAGAGCCATGTGGCTTGTTTTaGCAGATTGGGATAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: RRQTSAVRKAAIEVQEQEPCGLF*QIGIVT Trigger: TGTGACTATCCCAATCTGGCAAAACAAGCCACATGG...CTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCTGTTTCCTCTTCATCTaGAGCAATCCAGGCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: DGAAEDLPVNMNINGRSPCFLFI*SNPGNV Trigger: GACATTGCCTGGATTGCTGCAGATGAAGAGGAAACA...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR GCA 90 bp | CGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTGAAGTTCAGGAGCAAGAGACTGAGGCATTACGTTaGATGACAATCAGAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RRQTSAVRKAAIEVQEQETEALR*MTIRGL Trigger: TAGCCCTCTGATTGTCATGCAACGTAATGCCTCAGT...CTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCACTGAGGCATTACGTTaGATGACAATCAGAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: DGAAEDLPVNMNINGRSPTEALR*MTIRGL Trigger: TAGCCCTCTGATTGTCATGCAACGTAATGCCTCAGT...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCTGGCTGAGCTCATCCTaGAGCTCAGTGGTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFWLSSS*SSVVRL Trigger: GAGCCGCACCACTGAGCTGCAGGATGAGCTCAGCCA...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACCCCTTAAGCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCATCTGGCTGCGCAGGTaGCTGAGCTCATCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHPLSRYTPLYPIICNKCIWLRR*LSSSCS Trigger: GCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGAT...GCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGCTTAAGGGGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGGCAGGTCTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAGGAAGTTGTAGAGTaGAGGGAGGACCCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGAGLGWSSRRPSCEHEHKEVVE*REDPKQ Trigger: TTGCTTTGGGTCCTCCCTCCACTCTACAACTTCCTT...ATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAGACCTGCCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
||
| CDS-3UTR GCA 90 bp | CTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCTTTTGTGTTCTGGTTTaGAACACTCAGGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGWSSRRPSCEHEHKWPLFCVLV*NTQGWQ Trigger: CTGCCAGCCCTGAGTGTTGCAAACCAGAACACAAAA...GAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGCAGGTCTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATGAAAATCCTTCAGGATaGCCATCATGTCTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGAGLGWSSRRPSCEHEHENPSG*PSCLQS Trigger: GCTTTGCAGACATGATGGGCATCCTGAAGGATTTTC...ATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAGACCTGCCCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
||
| CDS-3UTR CCA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCCTTGTTTTGCCAGATTaGGATAGTCACATTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGAAEDLPVNMNINGRSPLVLPD*DSHIGF Trigger: GAAGCCAATGTGACTATCCCAATCTGGCAAAACAAG...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | TCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATATCGAGCAGCCCCATGTaGCTTGTTTTGCCAGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SISGTEEALEGRSGCSFISSSPM*LVLPDW Trigger: CCAATCTGGCAAAACAAGCCACATGGGGCTGCTCGA...TATAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCGCTTCAGGGGGAGATTaGTCCCAATTCTTCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGWSSRRPSCEHEHKWPLASGGD*SQFFLP Trigger: TGGTAAGAAGAATTGGGACCAATCTCCCCCTGAAGC...GAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | TCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATATGCAACACTCAGGGCTaGCAGAACAAAGTAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SISGTEEALEGRSGCSFICNTQG*QNKVGG Trigger: TCCCCCTACTTTGTTCTGCCAGCCCTGAGTGTTGCA...TATAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATGTCTGCAAAGCTGCTaGCCTTGGACAGAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FQSVELRRPWRVDQVVVLCLQSC*PWTERC Trigger: GCATCTCTCTGTCCAAGGCCAGCAGCTTTGCAGACA...TAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR TCA 90 bp | TCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATAGTCATCCTCTTCAGATaGGCTGCAGGTAGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SISGTEEALEGRSGCSFIVILFR*AAGSFV Trigger: CACAAAACTACCTGCAGCTCATCTGAAGAGGATGAC...TATAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTGTCAGTTCCCTTTTCTACTGATGTCTTCTTCCTTCAGGGCAAACTTCTTTTGTGTTCTGGTTTaGAACACTCAGGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCCQFPFLLMSSSFRANFFCVLV*NTQGWQ Trigger: CTGCCAGCCCTGAGTGTTGCAAACCAGAACACAAAA...GAAGTTTGCCCTGAAGGAAGAAGACATCAGTAGAAAAGGGAACTGACAGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACCCCTTAAGCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCGATGCCCATCATGTCTaGAAAGCTGCTGGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHPLSRYTPLYPIICNKCDAHHV*KAAGLG Trigger: TCCAAGGCCAGCAGCTTTGCAGACATGATGGGCATC...GCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGCTTAAGGGGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
||
| CDS-3UTR CCA 90 bp | TCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATAGCTTCAGGGGGAGATTaGTCCCAATTCTTCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SISGTEEALEGRSGCSFIASGGD*SQFFLP Trigger: TGGTAAGAAGAATTGGGACCAATCTCCCCCTGAAGC...TATAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCTGCAACACTCAGGGCTaGCAGAACAAAGTAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFCNTQG*QNKVGG Trigger: TCCCCCTACTTTGTTCTGCCAGCCCTGAGTGTTGCA...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTACCATGTGGCTTGTTTTaGCAGATTGGGATAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FQSVELRRPWRVDQVVVLPCGLF*QIGIVT Trigger: TGTGACTATCCCAATCTGGCAAAACAAGCCACATGG...TAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGAGTTAATTAAGTCGTTCATTGAGGGCTTAGTTTTCAGAGACAAGAAACAGGGTCTCAAAGGATaGCCGTGGACAGGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSELIKSFIEGLVFRDKKQGLKG*PWTGLQ Trigger: CTGAAGCCCTGTCCACGGGCATCCTTTGAGACCCTG...TTTCTTGTCTCTGAAAACTAAGCCCTCAATGAACGACTTAATTAACTCACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAACAGGGTCTCAAAGGATaGCCGTGGACAGGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADTLHSTQLSVTNASSQKQGLKG*PWTGLQ Trigger: CTGAAGCCCTGTCCACGGGCATCCTTTGAGACCCTG...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCTCATGTCTGCAAAGCTaGTGGCCTTGGACAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFSCLQS*WPWTER Trigger: TCTCTCTGTCCAAGGCCAGCAGCTTTGCAGACATGA...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTACTTGTTTTGCCAGATTaGGATAGTCACATTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQSVELRRPWRVDQVVVLLVLPD*DSHIGF Trigger: GAAGCCAATGTGACTATCCCAATCTGGCAAAACAAG...TAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACCCCTTAAGCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTGTTTCCTCTTCATCTaGAGCAATCCAGGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHPLSRYTPLYPIICNKCCFLFI*SNPGNV Trigger: GACATTGCCTGGATTGCTGCAGATGAAGAGGAAACA...GCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGCTTAAGGGGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCACTGAGGCATTACGTTaGATGACAATCAGAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFTEALR*MTIRGL Trigger: TAGCCCTCTGATTGTCATGCAACGTAATGCCTCAGT...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAATCGAGCAGCCCCATGTaGCTTGTTTTGCCAGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ADTLHSTQLSVTNASSQKSSSPM*LVLPDW Trigger: CCAATCTGGCAAAACAAGCCACATGGGGCTGCTCGA...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAATGTCTGCAAAGCTGCTaGCCTTGGACAGAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ADTLHSTQLSVTNASSQKCLQSC*PWTERC Trigger: GCATCTCTCTGTCCAAGGCCAGCAGCTTTGCAGACA...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | GAAATCGGTCACTGTCTTAGAAGGAGGATACCACACTCTTTCTCCTCATTTTTCCTTGTTTTGCCAGATTaGGATAGTCACATTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIGHCLRRRIPHSFSSFFLVLPD*DSHIGF Trigger: GAAGCCAATGTGACTATCCCAATCTGGCAAAACAAG...GAAAAATGAGGAGAAAGAGTGTGGTATCCTCCTTCTAAGACAGTGACCGATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGTGAGTTAATTAAGTCGTTCATTGAGGGCTTAGTTTTCAGAGACAAGAAACTCTGTTTTATCCGGTaGAAATCCTTCAGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSELIKSFIEGLVFRDKKLCFIR*KSFRMP Trigger: GGGCATCCTGAAGGATTTTCACCGGATAAAACAGAG...TTTCTTGTCTCTGAAAACTAAGCCCTCAATGAACGACTTAATTAACTCACTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
||
| CDS-3UTR TCA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAACTCTGTTTTATCCGGTaGAAATCCTTCAGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ADTLHSTQLSVTNASSQKLCFIR*KSFRMP Trigger: GGGCATCCTGAAGGATTTTCACCGGATAAAACAGAG...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGAGTTAATTAAGTCGTTCATTGAGGGCTTAGTTTTCAGAGACAAGAAAAGCCAGAGTAGGGACTaGAGGGACATCTTTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CSELIKSFIEGLVFRDKKSQSRD*RDIFQT Trigger: TGTTTGAAAGATGTCCCTCCAGTCCCTACTCTGGCT...TTTCTTGTCTCTGAAAACTAAGCCCTCAATGAACGACTTAATTAACTCACTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAAAAGGAAGTTGTAGAGTaGAGGGAGGACCCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ADTLHSTQLSVTNASSQKKEVVE*REDPKQ Trigger: TTGCTTTGGGTCCTCCCTCCACTCTACAACTTCCTT...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
||
| CDS-3UTR GCA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAAGAAAATCCTTCAGGATaGCCATCATGTCTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADTLHSTQLSVTNASSQKENPSG*PSCLQS Trigger: GCTTTGCAGACATGATGGGCATCCTGAAGGATTTTC...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
||
| CDS CCA 90 bp | GAAGCTGCGTCTGCCGCCACGATTTTAGCGATCTGGCTGCGCAGGTaGCTGAGCTCATCCTGCAGCTCAGTGGTGCGGCTCAGGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAASAATILAIWLRR*LSSSCSSVVRLRAG Trigger: GCCTGCCCTGAGCCGCACCACTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGATCGCTAAAATCGTGGCGGCAGACGCAGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000146808.2 ENSMUST00000154769.8 |
||
| CDS CCA 90 bp | GTCACTGCGTCTGCCGCCACGATTTTAGCGATCTGGCTGCGCAGGTaGCTGAGCTCATCCTGCAGCTCAGTGGTGCGGCTCAGGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTASAATILAIWLRR*LSSSCSSVVRLRAG Trigger: GCCTGCCCTGAGCCGCACCACTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGATCGCTAAAATCGTGGCGGCAGACGCAGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
||
| CDS CCA 90 bp | CTCCTCGGTGATGTCACTGCGTCTGCCGCCACGATTTTAGCGATCTaGCTGCGCAGGTGGCTGAGCTCATCCTGCAGCTCAGTGGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGDVTASAATILAI*LRRWLSSSCSSVVR Trigger: CCGCACCACTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGATCGCTAAAATCGTGGCGGCAGACGCAGTGACATCACCGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131613.8 |
||
| CDS CCA 90 bp | GTTAATGAAGCCGAAGCTGCGTCTGCCGCCACGATTTTAGCGATCTaGCTGCGCAGGTGGCTGAGCTCATCCTGCAGCTCAGTGGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VNEAEAASAATILAI*LRRWLSSSCSSVVR Trigger: CCGCACCACTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGATCGCTAAAATCGTGGCGGCAGACGCAGCTTCGGCTTCATTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000146808.2 ENSMUST00000154769.8 |
||
| CDS GCA 90 bp | AGCCTCTCCTCAGAGCCACGAAGGTTGGGCACTGAGGCATTACGTTaGATGACAATCAGAGGGCTAGGCTTCCAGGTATGTCTCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSEPRRLGTEALR*MTIRGLGFQVCLRG Trigger: CCCTCTGAGACATACCTGGAAGCCTAGCCCTCTGATTGTCATGCAACGTAATGCCTCAGTGCCCAACCTTCGTGGCTCTGAGGAGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGACGGTTGCAGATCTCGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATGCAAAGCTGCTGGCCTaGGACAGAGAGATGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARRLQISETDICGEEGSYAKLLA*DREMQS Trigger: TGACTGCATCTCTCTGTCCAAGGCCAGCAGCTTTGC...ATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCGAGATCTGCAACCGTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS GCA 90 bp | AGGGCGTGTATCACTCCTGACCCGAGCATATGTTTCCTCTTCATCTaGAGCAATCCAGGCAATGTCAGCCAGAGTAGGGACTGGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RACITPDPSICFLFI*SNPGNVSQSRDWRD Trigger: GTCCCTCCAGTCCCTACTCTGGCTGACATTGCCTGGATTGCTGCAGATGAAGAGGAAACATATGCTCGGGTCAGGAGTGATACACGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGAGAGCCACAGCTGTGCACGTGTCCAGCGAGACCAATTATGGAGACTAGGCTTCAGGGGGAGATaGGTCCCAATTCTTCTTACC | + |
|
Preference number: 5 (lower is better) Translates to: AAESHSCARVQRDQLWRLGFRGR*VPILLT Trigger: GGTAAGAAGAATTGGGACCAATCTCCCCCTGAAGCC...TAGTCTCCATAATTGGTCTCGCTGGACACGTGCACAGCTGTGGCTCTCAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTAGCCCAAGCCCTAGTCAGCAAGACGGTTGCAGATCTCGGAGACAGACATCAGAGCCACGAAGGTaGGGCACTGAGGCATTACGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSPSQQDGCRSRRQTSEPRR*GTEALR Trigger: ACGTAATGCCTCAGTGCCCAACCTTCGTGGCTCTGA...TGTCTGTCTCCGAGATCTGCAACCGTCTTGCTGACTAGGGCTTGGGCTAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
||
| CDS-3UTR CAA 90 bp | CGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTGAAGTTCAGGAGCAAGAGTCAGAGCCACGAAGGTaGGGCACTGAGGCATTACGT | + |
|
Preference number: 5 (lower is better) Translates to: RRQTSAVRKAAIEVQEQESEPRR*GTEALR Trigger: ACGTAATGCCTCAGTGCCCAACCTTCGTGGCTCTGA...CTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCGCAAAGCTGCTGGCCTaGGACAGAGAGATGCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: DGAAEDLPVNMNINGRSPAKLLA*DREMQS Trigger: TGACTGCATCTCTCTGTCCAAGGCCAGCAGCTTTGC...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | GCTGCTGAGAGCCACAGCTGTGCACGTGTCCAGCGAGACCAATTATGGAGACTACCCATGTGGCTTGTTTaGCCAGATTGGGATAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: AAESHSCARVQRDQLWRLPMWLV*PDWDSH Trigger: GTGACTATCCCAATCTGGCAAAACAAGCCACATGGG...TAGTCTCCATAATTGGTCTCGCTGGACACGTGCACAGCTGTGGCTCTCAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCGGCTTCAGGGGGAGATaGGTCCCAATTCTTCTTACC | + |
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Preference number: 5 (lower is better) Translates to: DGAAEDLPVNMNINGRSPGFRGR*VPILLT Trigger: GGTAAGAAGAATTGGGACCAATCTCCCCCTGAAGCC...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGGCAGGTCTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATTCAGAGCCACGAAGGTaGGGCACTGAGGCATTACGT | + |
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Preference number: 5 (lower is better) Translates to: TGAGLGWSSRRPSCEHEHSEPRR*GTEALR Trigger: ACGTAATGCCTCAGTGCCCAACCTTCGTGGCTCTGA...ATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAGACCTGCCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS CCA 90 bp | CTCTTCATCTGCAGCAATCCAGGCAATGTCAGCCAGAGTAGGGACTaGAGGGACATCTTTCAAACACAGGTCAGAGATGTTGGGCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LFICSNPGNVSQSRD*RDIFQTQVRDVGQG Trigger: ACCCTGCCCAACATCTCTGACCTGTGTTTGAAAGATGTCCCTCCAGTCCCTACTCTGGCTGACATTGCCTGGATTGCTGCAGATGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS-3UTR CAA 90 bp | GATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCCCCCCCCATGTGGCTTGTTTaGCCAGATTGGGATAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: DGAAEDLPVNMNINGRSPPMWLV*PDWDSH Trigger: GTGACTATCCCAATCTGGCAAAACAAGCCACATGGG...GGGGGAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATC 52% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGGCAGGTCTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATGCAGCCCCATGTGGCTaGTTTTGCCAGATTGGGATA | + |
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Preference number: 5 (lower is better) Translates to: TGAGLGWSSRRPSCEHEHAAPCG*FCQIGI Trigger: TATCCCAATCTGGCAAAACAAGCCACATGGGGCTGC...ATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAGACCTGCCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | CGGAGACAGACATCTGCGGTGAGGAAGGCAGCTATTGAAGTTCAGGAGCAAGAGGTTTTGTGTTCTGGTTaGCAACACTCAGGGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RRQTSAVRKAAIEVQEQEVLCSG*QHSGLA Trigger: TGCCAGCCCTGAGTGTTGCAAACCAGAACACAAAAC...CTCTTGCTCCTGAACTTCAATAGCTGCCTTCCTCACCGCAGATGTCTGTCTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS CCA 90 bp | TCCGTCTCCTCGGTGATGTCACTAATGACAAAGGAAGTTGTAGAGTaGAGGGAGGACCCAAAGCAAGGCAAAGGCGAAGAGACATTCGAA | + |
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Preference number: 5 (lower is better) Translates to: SVSSVMSLMTKEVVE*REDPKQGKGEETFE Trigger: TTCGAATGTCTCTTCGCCTTTGCCTTGCTTTGGGTCCTCCCTCCACTCTACAACTTCCTTTGTCATTAGTGACATCACCGAGGAGACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS-3UTR CAA 90 bp | CTAGGATGGAGCAGCAGAAGACCTTCCTGTGAACATGAACATAAATGGCCGCTCGTTTTGTGTTCTGGTTaGCAACACTCAGGGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LGWSSRRPSCEHEHKWPLVLCSG*QHSGLA Trigger: TGCCAGCCCTGAGTGTTGCAAACCAGAACACAAAAC...GAGCGGCCATTTATGTTCATGTTCACAGGAAGGTCTTCTGCTGCTCCATCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | TCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATAGGCTTCAGGGGGAGATaGGTCCCAATTCTTCTTACC | + |
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Preference number: 5 (lower is better) Translates to: SISGTEEALEGRSGCSFIGFRGR*VPILLT Trigger: GGTAAGAAGAATTGGGACCAATCTCCCCCTGAAGCC...TATAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | TCAATCAGTGGAACTGAGGAGGCCCTGGAGGGTAGATCAGGTTGTAGTTTTATACCCATGTGGCTTGTTTaGCCAGATTGGGATAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SISGTEEALEGRSGCSFIPMWLV*PDWDSH Trigger: GTGACTATCCCAATCTGGCAAAACAAGCCACATGGG...TATAAAACTACAACCTGATCTACCCTCCAGGGCCTCCTCAGTTCCACTGATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | CTTCACCCCTTAAGCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCGCAAAGCTGCTGGCCTaGGACAGAGAGATGCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LHPLSRYTPLYPIICNKCAKLLA*DREMQS Trigger: TGACTGCATCTCTCTGTCCAAGGCCAGCAGCTTTGC...GCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGCTTAAGGGGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | CTTCACCCCTTAAGCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCGCAGCCCCATGTGGCTaGTTTTGCCAGATTGGGATA | + |
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Preference number: 5 (lower is better) Translates to: LHPLSRYTPLYPIICNKCAAPCG*FCQIGI Trigger: TATCCCAATCTGGCAAAACAAGCCACATGGGGCTGC...GCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGCTTAAGGGGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS-3UTR CAA 90 bp | GCAGATACACTCCACTCTACCCAATTATCTGTAACAAATGCTTCATCTCAAAAAGTTTTGTGTTCTGGTTaGCAACACTCAGGGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: ADTLHSTQLSVTNASSQKVLCSG*QHSGLA Trigger: TGCCAGCCCTGAGTGTTGCAAACCAGAACACAAAAC...TTTTTGAGATGAAGCATTTGTTACAGATAATTGGGTAGAGTGGAGTGTATCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 |
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| CDS CCA 72 bp | TCTGCCGCCACGATTTTAGCGATCTGGCTGCGCAGGTaGCTGAGCTCATCCTGCAGCTCAGTGGTGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SAATILAIWLRR*LSSSCSSVVRL Trigger: GAGCCGCACCACTGAGCTGCAGGATGAGCTCAGCCACCTGCGCAGCCAGATCGCTAAAATCGTGGCGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS CAA 90 bp | GCCGGCTTCTTCAGGGCCAGGAGCCTCTCCTCAGAGCCACGAAGGTaGGGCACTGAGGCATTACGTTGCATGACAATCAGAGGGCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGFFRARSLSSEPRR*GTEALRCMTIRGLG Trigger: GCCTAGCCCTCTGATTGTCATGCAACGTAATGCCTCAGTGCCCAACCTTCGTGGCTCTGAGGAGAGGCTCCTGGCCCTGAAGAAGCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS CAA 72 bp | TTCAGGGCCAGGAGCCTCTCCTCAGAGCCACGAAGGTaGGGCACTGAGGCATTACGTTGCATGACAATCAGA | + |
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Preference number: 6 (lower is better) Translates to: FRARSLSSEPRR*GTEALRCMTIR Trigger: TCTGATTGTCATGCAACGTAATGCCTCAGTGCCCAACCTTCGTGGCTCTGAGGAGAGGCTCCTGGCCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS GCA 72 bp | TCAGAGCCACGAAGGTTGGGCACTGAGGCATTACGTTaGATGACAATCAGAGGGCTAGGCTTCCAGGTATGT | + |
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Preference number: 6 (lower is better) Translates to: SEPRRLGTEALR*MTIRGLGFQVC Trigger: ACATACCTGGAAGCCTAGCCCTCTGATTGTCATGCAACGTAATGCCTCAGTGCCCAACCTTCGTGGCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS CAA 90 bp | CAGTCATCCTCTTCAGATGAGCTGCAGGTAGTTTTGTGTTCTGGTTaGCAACACTCAGGGCTGGCAGAACAAAGTAGGGGGACGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: QSSSSDELQVVLCSG*QHSGLAEQSRGTVG Trigger: CCCAACCGTCCCCCTACTTTGTTCTGCCAGCCCTGAGTGTTGCAAACCAGAACACAAAACTACCTGCAGCTCATCTGAAGAGGATGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000154769.8 |
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| CDS CCA 72 bp | AATCCTTCAGGATGCCCATCATGTCTGCAAAGCTGCTaGCCTTGGACAGAGAGATGCAGTCATCCTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: NPSGCPSCLQSC*PWTERCSHPLQ Trigger: CTGAAGAGGATGACTGCATCTCTCTGTCCAAGGCCAGCAGCTTTGCAGACATGATGGGCATCCTGAAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
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| CDS CCA 72 bp | CCCAATTCTTCTTACCACACTTCGAGCAGCCCCATGTaGCTTGTTTTGCCAGATTGGGATAGTCACATTGGC | + |
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Preference number: 6 (lower is better) Translates to: PNSSYHTSSSPM*LVLPDWDSHIG Trigger: GCCAATGTGACTATCCCAATCTGGCAAAACAAGCCACATGGGGCTGCTCGAAGTGTGGTAAGAAGAATTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS CCA 72 bp | TGCAGCAATCCAGGCAATGTCAGCCAGAGTAGGGACTaGAGGGACATCTTTCAAACACAGGTCAGAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: CSNPGNVSQSRD*RDIFQTQVRDV Trigger: AACATCTCTGACCTGTGTTTGAAAGATGTCCCTCCAGTCCCTACTCTGGCTGACATTGCCTGGATTGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS CCA 72 bp | TCGGTGATGTCACTAATGACAAAGGAAGTTGTAGAGTaGAGGGAGGACCCAAAGCAAGGCAAAGGCGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SVMSLMTKEVVE*REDPKQGKGEE Trigger: CTCTTCGCCTTTGCCTTGCTTTGGGTCCTCCCTCCACTCTACAACTTCCTTTGTCATTAGTGACATCACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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| CDS TCA 72 bp | GGCCTTGGACAGAGAGATGCAGTCATCCTCTTCAGATaGGCTGCAGGTAGTTTTGTGTTCTGGTTTGCAACA | + |
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Preference number: 6 (lower is better) Translates to: GLGQRDAVILFR*AAGSFVFWFAT Trigger: TGTTGCAAACCAGAACACAAAACTACCTGCAGCTCATCTGAAGAGGATGACTGCATCTCTCTGTCCAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000154769.8 |
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| CDS TCA 72 bp | AAACTCCGGCTCAGGTCTTGGCTCTGTTTTATCCGGTaGAAATCCTTCAGGATGCCCATCATGTCTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KLRLRSWLCFIR*KSFRMPIMSAK Trigger: CTTTGCAGACATGATGGGCATCCTGAAGGATTTTCACCGGATAAAACAGAGCCAAGACCTGAGCCGGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 |
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| CDS CAA 72 bp | ATTCTTCTTACCACACTTCGAGCAGCCCCATGTGGCTaGTTTTGCCAGATTGGGATAGTCACATTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ILLTTLRAAPCG*FCQIGIVTLAS Trigger: GGAAGCCAATGTGACTATCCCAATCTGGCAAAACAAGCCACATGGGGCTGCTCGAAGTGTGGTAAGAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000102550.10 ENSMUST00000116279.10 ENSMUST00000131613.8 ENSMUST00000146808.2 ENSMUST00000154769.8 |
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