Pregenerated sensors for MTFR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027601Ensembl transcript IDs: ENSMUST00000029129.10, ENSMUST00000117529.8, ENSMUST00000119865.8, ENSMUST00000130645.8, ENSMUST00000130806.8, ENSMUST00000132035.2, ENSMUST00000138777.8
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGCCTCCTCGCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTTaGGACAGGCTTGGGAAGGAAGTGTGCCTGCTTGGGGGCTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: RASSLASVLSGEGLS*DRLGKEVCLLGGFS Trigger: TGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR CCA 90 bp | GCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTTGAGACAGGCTTaGGAAGGAAGTGTGCCTGCTTGGGGGCTTCTCAAAGCAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: AGQRPLWRRLVLRQA*EGSVPAWGLLKARR Trigger: CCTCCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR TCA 90 bp | TGCCAACCCTGGGTTGGTGGTCCTGGGTTCTATAAGAAAGCAGGCTaGGCAGGCCATAGGAAGCAAGCCAGTAAGCAGCAGCCTCCATGG | + |
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Preference number: 1 (lower is better) Translates to: CQPWVGGPGFYKKAG*AGHRKQASKQQPPW Trigger: CCATGGAGGCTGCTGCTTACTGGCTTGCTTCCTATGGCCTGCTCAGCCTGCTTTCTTATAGAACCCAGGACCACCAACCCAGGGTTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR GCA 90 bp | CTGGAGAAGGCTTGTCTTGAGACAGGCTTGGGAAGGAAGTGTGCCTaGTTGGGGGCTTCTCAAAGCAAGGAGGGTCATCCTCATGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LEKACLETGLGRKCA*LGASQSKEGHPHEE Trigger: CTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR TCA 90 bp | GTGTGCCTGCTTGGGGGCTTCTCAAAGCAAGGAGGGTCATCCTCATaGGGAGGCTTGGAACTGACTTCTGCCCTGAGTCTTATTGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: VCLLGGFSKQGGSSS*GGLELTSALSLIEH Trigger: GTGCTCAATAAGACTCAGGGCAGAAGTCAGTTCCAAGCCTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAGCAGGCACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR TCA 90 bp | GCACTTGGACTCTGTTGCTCCTGCAGGGTCACAATCTTGGCAATCTaGGCTCTAAGGGCAGCAAGCTCATTCTCAAGGGCAGAGATCTTC | + |
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Preference number: 1 (lower is better) Translates to: ALGLCCSCRVTILAI*ALRAASSFSRAEIF Trigger: GAAGATCTCTGCCCTTGAGAATGAGCTTGCTGCCCTTAGAGCTCAGATTGCCAAGATTGTGACCCTGCAGGAGCAACAGAGTCCAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR TCA 90 bp | ATCCTCATGAGGAGGCTTGGAACTGACTTCTGCCCTGAGTCTTATTaGGCACTCTCCTTCTTCAGTGGCTACCAATCCAACATCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: ILMRRLGTDFCPESY*ALSFFSGYQSNISK Trigger: TTTGCTGATGTTGGATTGGTAGCCACTGAAGAAGGAGAGTGCTCAATAAGACTCAGGGCAGAAGTCAGTTCCAAGCCTCCTCATGAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR GCA 90 bp | CCCTCTAACAGAAAGCAACACAGAGACTCAGCAGTAAACATCTTCTaGTGTTTATGTAAACTCAGCTCCAGAAAACAGAAAGTGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: PSNRKQHRDSAVNIF*CLCKLSSRKQKVRT Trigger: TGTTCTCACTTTCTGTTTTCTGGAGCTGAGTTTACATAAACAGCAGAAGATGTTTACTGCTGAGTCTCTGTGTTGCTTTCTGTTAGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
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| 3UTR CAA 90 bp | CAGGGCCTCCTCGCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTaGAGACAGGCTTGGGAAGGAAGTGTGCCTGCTTGGGGGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QGLLAGQRPLWRRLV*RQAWEGSVPAWGLL Trigger: GAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR CAA 90 bp | CGCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTTGAGACAGGCTaGGGAAGGAAGTGTGCCTGCTTGGGGGCTTCTCAAAGCAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RWPASSLEKACLETG*GRKCACLGASQSKE Trigger: CTCCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR CAA 90 bp | GAGAAGGCTTGTCTTGAGACAGGCTTGGGAAGGAAGTGTGCCTGCTaGGGGGCTTCTCAAAGCAAGGAGGGTCATCCTCATGAGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: EKACLETGLGRKCAC*GASQSKEGHPHEEA Trigger: AGCCTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGAAAGTGAGAACATACTCAAGTCCTGTCCGAGGCATTCCCAGCTCCAATCTCTGCATCAGCTCCTaGCTCCAGGGCCCTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KQKVRTYSSPVRGIPSSNLCISS*LQGPAL Trigger: CAGGGCAGGGCCCTGGAGCCAGGAGCTGATGCAGAG...ATTGGAGCTGGGAATGCCTCGGACAGGACTTGAGTATGTTCTCACTTTCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACACGGGCTGGCTCTGAGGTaGCCTCTGACTCTGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SLLLTPLVGLRRKETNEHGLALR*PLTLAL Trigger: CAAAGCCAGAGTCAGAGGCCACCTCAGAGCCAGCCC...GTGTTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR-3UTR TCA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACACCGCATCCTCTCCTaGGTGTGCGGGACTCCATTC | + |
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Preference number: 2 (lower is better) Translates to: LSLLLTPLVGLRRKETNEHRILS*VCGTPF Trigger: GAATGGAGTCCCGCACACTCAGGAGAGGATGCGGTG...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAAGGCTTGTCTTGAGACAGGCTTGGGAAGGAAGTGTGCCTGCTTGGGGGACTCTCCTTCTTCAGTaGCTACCAATCCAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: WRRLVLRQAWEGSVPAWGTLLLQ*LPIQHQ Trigger: CTGATGTTGGATTGGTAGCCACTGAAGAAGGAGAGT...CCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTCCTCTCTGGAGAAGGCTTGTCTTGAGACAGGCTTGGGAAGGAAGTGTGACTCTCCTTCTTCAGTaGCTACCAATCCAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: QRPLWRRLVLRQAWEGSVTLLLQ*LPIQHQ Trigger: CTGATGTTGGATTGGTAGCCACTGAAGAAGGAGAGT...CACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACACGTCTTGAGACAGGCTTaGGAAGGAAGTGTGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLLTPLVGLRRKETNEHVLRQA*EGSVPA Trigger: AGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGAC...GTGTTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGGTTTTACATCTTTCTCTGACCTCTTGACTGACCGTAGCTTCACACTGTGCCCTGAGTCTTATTaGGCACTCTCCTTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GLGFTSFSDLLTDRSFTLCPESY*ALSFFS Trigger: ACTGAAGAAGGAGAGTGCTCAATAAGACTCAGGGCA...CAGTGTGAAGCTACGGTCAGTCAAGAGGTCAGAGAAAGATGTAAAACCCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGACTTGAGAAGTTCATTTaGTTCCCAGTAGTGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: LVISPRQTQLCKPTGEPGLEKFI*FPVVGG Trigger: ACCACCCACTACTGGGAAGCAAATGAACTTCTCAAG...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCCTTCTTCAGTGGCTACCAATCCAACATCAGCAAAAGATGCCACCGCATGGGACTCCATTCTGTTaGATGGCTGGTAAGCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TLLLQWLPIQHQQKMPPHGTPFC*MAGKLE Trigger: TTCAAGCTTACCAGCCATGCAACAGAATGGAGTCCC...ATGCGGTGGCATCTTTTGCTGATGTTGGATTGGTAGCCACTGAAGAAGGAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138777.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGCTCCATTCTGTTGCATaGCTGGTAAGTGTTAATTTG | + |
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Preference number: 2 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLLHSVA*LVSVNL Trigger: CAAATTAACACTTACCAGCCATGCAACAGAATGGAG...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR-3UTR TCA 90 bp | AAATTCAATTACGCTGACATTTCTAGAAGTATTGTGGTGGCTAGTTTGTCAGCTTATAAGAAAGCAGGCTaGGCAGGCCATAGGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: KFNYADISRSIVVASLSAYKKAG*AGHRKQ Trigger: TTGCTTCCTATGGCCTGCTCAGCCTGCTTTCTTATA...AGCTGACAAACTAGCCACCACAATACTTCTAGAAATGTCAGCGTAATTGAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGTTTCTCCTTGGCTATTGTGTCGATATGCAAACTTCTTTTTCAGAGCCTCCAGCACTGAGTCTCTaGTCTCTTCTTTCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: FQFLLGYCVDMQTSFSEPPALSL*SLLSLI Trigger: GATTAAAGAAAGAAGAGAGCAGAGACTCAGTGCTGG...AGGCTCTGAAAAAGAAGTTTGCATATCGACACAATAGCCAAGGAGAAACTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR CCA 72 bp | GGCCATAGGAAGCAAGCCAGTAAGCAGCAGCCTCCATaGCCTCTGCATCAGCTCCTGGCTCCAGGGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: GHRKQASKQQPP*PLHQLLAPGPC Trigger: GCAGGGCCCTGGAGCCAGGAGCTGATGCAGAGGCCATGGAGGCTGCTGCTTACTGGCTTGCTTCCTATGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR GCA 72 bp | AGGGCAGCAAGCTCATTCTCAAGGGCAGAGATCTTCTaGAGGGCCTCCTCGCTGGCCAGCGTCCTCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: RAASSFSRAEIF*RASSLASVLSG Trigger: TCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTGCAGAAGATCTCTGCCCTTGAGAATGAGCTTGCTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR TCA 72 bp | TCGCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTTaGGACAGGCTTGGGAAGGAAGTGTGCCTGCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLASVLSGEGLS*DRLGKEVCLLG Trigger: CCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR GCA 72 bp | GCCTCTGCATCAGCTCCTGGCTCCAGGGCCCTGCCCTaGTTAGTCCCTGCCCTCAATGCTTGTGATGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: ASASAPGSRALP*LVPALNACDEE Trigger: TTCTTCATCACAAGCATTGAGGGCAGGGACTAAGCAGGGCAGGGCCCTGGAGCCAGGAGCTGATGCAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR CCA 72 bp | TCTCAAGGGCAGAGATCTTCTGCAGGGCCTCCTCGCTaGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: SQGQRSSAGPPR*PASSLEKACLE Trigger: CTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTGCAGAAGATCTCTGCCCTTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR GCA 72 bp | GCTTGTCTTGAGACAGGCTTGGGAAGGAAGTGTGCCTaGTTGGGGGCTTCTCAAAGCAAGGAGGGTCATCCT | + |
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Preference number: 3 (lower is better) Translates to: ACLETGLGRKCA*LGASQSKEGHP Trigger: AGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR CCA 72 bp | CGTCCTCTCTGGAGAAGGCTTGTCTTGAGACAGGCTTaGGAAGGAAGTGTGCCTGCTTGGGGGCTTCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: RPLWRRLVLRQA*EGSVPAWGLLK Trigger: TTTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR TCA 72 bp | CTTGGGGGCTTCTCAAAGCAAGGAGGGTCATCCTCATaGGGAGGCTTGGAACTGACTTCTGCCCTGAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LGGFSKQGGSSS*GGLELTSALSL Trigger: AAGACTCAGGGCAGAAGTCAGTTCCAAGCCTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR TCA 72 bp | TGGGTTGGTGGTCCTGGGTTCTATAAGAAAGCAGGCTaGGCAGGCCATAGGAAGCAAGCCAGTAAGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: WVGGPGFYKKAG*AGHRKQASKQQ Trigger: CTGCTGCTTACTGGCTTGCTTCCTATGGCCTGCTCAGCCTGCTTTCTTATAGAACCCAGGACCACCAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR TCA 72 bp | CTCTGTTGCTCCTGCAGGGTCACAATCTTGGCAATCTaGGCTCTAAGGGCAGCAAGCTCATTCTCAAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LCCSCRVTILAI*ALRAASSFSRA Trigger: TGCCCTTGAGAATGAGCTTGCTGCCCTTAGAGCTCAGATTGCCAAGATTGTGACCCTGCAGGAGCAACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGGATCTCAAGCATATTaGGCATGTCAGGCTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LVISPRQTQLCKPTGEPGGSQAY*ACQASL Trigger: CAAAGAAGCCTGACATGCCAAATATGCTTGAGATCC...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR GCA 72 bp | TGGCCCGTAGCCAAAGTCTTTCCAGCACTGAGTCTCTaGTCTCTTCTTTCTTTAATCAGATCAAGAGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: WPVAKVFPALSL*SLLSLIRSRAD Trigger: GTCTGCTCTTGATCTGATTAAAGAAAGAAGAGAGCAGAGACTCAGTGCTGGAAAGACTTTGGCTACGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR TCA 72 bp | AGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTaGATTCATTGTCCATTAGGAGTCGGGAACATTTTC | + |
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Preference number: 3 (lower is better) Translates to: SSASQLVNQESF*IHCPLGVGNIF Trigger: GAAAATGTTCCCGACTCCTAATGGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
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| 3UTR CCA 72 bp | CATAAACCATTTCCTCCCCCAAGGTGCTTCTGGCCATaGTGTTTCATCACAGTGATGGTAACCTTAACTAAG | + |
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Preference number: 3 (lower is better) Translates to: HKPFPPPRCFWP*CFITVMVTLTK Trigger: CTTAGTTAAGGTTACCATCACTGTGATGAAACACCATGGCCAGAAGCACCTTGGGGGAGGAAATGGTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR GCA 72 bp | AGTCATCTAAAAGGAAGTGAACCTCAATTGAGAAAATaGCTCCATAAGATCTGGCTGCAAGGCCTTCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: SHLKGSEPQLRK*LHKIWLQGLLL Trigger: TAAGAGAAGGCCTTGCAGCCAGATCTTATGGAGGCATTTTCTCAATTGAGGTTCACTTCCTTTTAGATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR CCA 72 bp | AATTCAATTACGCTGACATTTCTAGAAGTATTGTGGTaGCTAGTTTGTCAGCTTGACACAGCTAGAGTCATC | + |
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Preference number: 3 (lower is better) Translates to: NSITLTFLEVLW*LVCQLDTARVI Trigger: GATGACTCTAGCTGTGTCAAGCTGACAAACTAGCCACCACAATACTTCTAGAAATGTCAGCGTAATTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR GCA 72 bp | AGAAAGCAACACAGAGACTCAGCAGTAAACATCTTCTaGTGTTTATGTAAACTCAGCTCCAGAAAACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: RKQHRDSAVNIF*CLCKLSSRKQK Trigger: TTTCTGTTTTCTGGAGCTGAGTTTACATAAACAGCAGAAGATGTTTACTGCTGAGTCTCTGTGTTGCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
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| 3UTR CCA 72 bp | ATAAATTCAATTACGCTGACATTTCTAGAAGTATTGTaGTGGCTAGTTTGTCAGCTTGACACAGCTAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: INSITLTFLEVL*WLVCQLDTARV Trigger: GACTCTAGCTGTGTCAAGCTGACAAACTAGCCACCACAATACTTCTAGAAATGTCAGCGTAATTGAATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| CDS-3UTR CCA 90 bp | GGCCATAGGAAGCAAGCCAGTAAGCAGCAGCCTCCATGGCCTCTGCATCAGCTCGCAGGGCCTCCTCGCTaGCCAGCGTCCTCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GHRKQASKQQPPWPLHQLAGPPR*PASSLE Trigger: CTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTGC...GAGCTGATGCAGAGGCCATGGAGGCTGCTGCTTACTGGCTTGCTTCCTATGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
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| 3UTR CAA 72 bp | CTCGCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTaGAGACAGGCTTGGGAAGGAAGTGTGCCTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LAGQRPLWRRLV*RQAWEGSVPAW Trigger: CCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| CDS-3UTR CCA 90 bp | CTTCTGCAGGGCCTCCTCGCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTTGAGAGGCAGAGGCAAGTaGATCTCAGAGTTCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LLQGLLAGQRPLWRRLVLRGRGK*ISEFKD Trigger: GTCCTTGAACTCTGAGATCCACTTGCCTCTGCCTCT...CAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTGCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138777.8 |
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| CDS-3UTR CCA 90 bp | ACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGTCCGCAGGGCCTCCTCGCTaGCCAGCGTCCTCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TQLCKPTGEPGVFLNSLSAGPPR*PASSLE Trigger: CTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTGC...GGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
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| 3UTR CAA 72 bp | GCGTCCTCTCTGGAGAAGGCTTGTCTTGAGACAGGCTaGGGAAGGAAGTGTGCCTGCTTGGGGGCTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: ASSLEKACLETG*GRKCACLGASQ Trigger: TTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAGGACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCAGGGCCCTGCCCTGCTTAGTCCCTGCCCTCAATGCTTGTGATGAAGAAGGGACTCCATTCTGTTaGATGGCTGGTAAGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRALPCLVPALNACDEEGTPFC*MAGKLK Trigger: TTTCAGCTTACCAGCCATGCAACAGAATGGAGTCCC...TTCTTCATCACAAGCATTGAGGGCAGGGACTAAGCAGGGCAGGGCCCTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGACCTCCTGCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAGGAGGAGGAGGTGGTaGTGGTGGTGCTACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: EARPPAAFTASYSSSWAQRRRRW*WWCYSN Trigger: GTTACTGTAGCACCACCACCACCACCTCCTCCTCCT...CTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGCAGGAGGTCTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGGGCTGGCTCTGAGGTaGCCTCTGACTCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVISPRQTQLCKPTGEPGGLALR*PLTLAL Trigger: CAAAGCCAGAGTCAGAGGCCACCTCAGAGCCAGCCC...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| 3UTR CAA 72 bp | TGTCTTGAGACAGGCTTGGGAAGGAAGTGTGCCTGCTaGGGGGCTTCTCAAAGCAAGGAGGGTCATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLETGLGRKCAC*GASQSKEGHPH Trigger: ATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029129.10 ENSMUST00000138777.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCAGGGCCTCCTCGCTGGCCAGCGTCCTCTCTGGAGAAGGCTTGTCTTGTACGATACTTCGAGATaGACCATATGGTTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLQGLLAGQRPLWRRLVLYDTSR*TIWFSR Trigger: TCTGGAAAACCATATGGTTCATCTCGAAGTATCGTA...CAAGACAAGCCTTCTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGTCCCACCGCATCCTCTCCTaGGTGTGCGGGACTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLCKPTGEPGVFLNSLSHRILS*VCGTPF Trigger: GAATGGAGTCCCGCACACTCAGGAGAGGATGCGGTG...GGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | GAAGATAACAGTGTCCTCTCTGATGCCATTCATGGTGAAATGTGTGCACAGATTGCAGGGCCTCCTCGCTaGCCAGCGTCCTCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EDNSVLSDAIHGEMCAQIAGPPR*PASSLE Trigger: CTCCAGAGAGGACGCTGGCCAGCGAGGAGGCCCTGC...AATCTGTGCACACATTTCACCATGAATGGCATCAGAGAGGACACTGTTATCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATAGGAAGCAAGCCAGTAAGCAGCAGCCTCCATGGCCTCTGCATCAGCTCCCAGCACTGAGTCTCTaGTCTCTTCTTTCTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: GHRKQASKQQPPWPLHQLPALSL*SLLSLI Trigger: GATTAAAGAAAGAAGAGAGCAGAGACTCAGTGCTGG...GAGCTGATGCAGAGGCCATGGAGGCTGCTGCTTACTGGCTTGCTTCCTATGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAAGGAAGTGTGCCTGCTTaGGGGCTTCTCAAAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAFTASYSSSWAQKEGDQGSVPA*GLLKAR Trigger: CCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCC...TTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAAGGAGGAGGAGGTGGTaGTGGTGGTGCTACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVISPRQTQLCKPTGEPGRRRRW*WWCYSN Trigger: GTTACTGTAGCACCACCACCACCACCTCCTCCTCCT...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGGGGCTGGCTCTGAGGTaGCCTCTGACTCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLGLALR*PLTLAL Trigger: CAAAGCCAGAGTCAGAGGCCACCTCAGAGCCAGCCC...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAAGGGCTGGCTCTGAGGTaGCCTCTGACTCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLTPLVGLRRKETNEGLALR*PLTLAL Trigger: CAAAGCCAGAGTCAGAGGCCACCTCAGAGCCAGCCC...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGGAGAAGGCTTGTCTTaGGACAGGCTTGGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVISPRQTQLCKPTGEPGGEGLS*DRLGKE Trigger: TTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCC...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | TCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACACGGAAGTGTGCCTGCTTaGGGGCTTCTCAAAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLTPLVGLRRKETNEHGSVPA*GLLKAR Trigger: CCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCC...GTGTTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGACTCAGGTCTTGAGACAGGCTTaGGAAGGAAGTGTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGLPGPHFPLTESNTETQVLRQA*EGSVPA Trigger: AGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGAC...CTGAGTCTCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGTCCGGCCAGCGTCCTCTCTaGAGAAGGCTTGTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLCKPTGEPGVFLNSLSGQRPL*RRLVLR Trigger: TCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCC...GGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | AAATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGACTCAAGGAGGAGGAGGTGGTaGTGGTGGTGCTACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KWPSWSSLPSNRKQHRDSRRRRW*WWCYSN Trigger: GTTACTGTAGCACCACCACCACCACCTCCTCCTCCT...TGAGTCTCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGACCTCCTGCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGCAGTATCCGCTGGCCTaGGTTTTACATCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EARPPAAFTASYSSSWAQQYPLA*VLHLSL Trigger: CAGAGAAAGATGTAAAACCCAGGCCAGCGGATACTG...CTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGCAGGAGGTCTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| 3UTR CAA 72 bp | TTAGTGATTGATGGGGAAGGTAGTGCCAACCCTGGGTaGGTGGTCCTGGGTTCTATAAGAAAGCAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVIDGEGSANPG*VVLGSIRKQAE Trigger: CTCAGCCTGCTTTCTTATAGAACCCAGGACCACCAACCCAGGGTTGGCACTACCTTCCCCATCAATCACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCAGACCTCCTGCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGTCTTTCCAGCACTaGGTCTCTGCTCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EARPPAAFTASYSSSWAQKSFQH*VSALFF Trigger: AAAGAAGAGAGCAGAGACTCAGTGCTGGAAAGACTT...CTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGCAGGAGGTCTGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGGGAAGTGTGCCTGCTTaGGGGCTTCTCAAAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLGSVPA*GLLKAR Trigger: CCTTGCTTTGAGAAGCCCCCAAGCAGGCACACTTCC...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGTCCGTCTTGAGACAGGCTTaGGAAGGAAGTGTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLCKPTGEPGVFLNSLSVLRQA*EGSVPA Trigger: AGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGAC...GGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTAGTGAACTCTCAGTGAAGAGGAAGATAACAGTGTCCTCTCTGATGCCAGGCCAGCGTCCTCTCTaGAGAAGGCTTGTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSELSVKRKITVSSLMPGQRPL*RRLVLR Trigger: TCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCC...TGGCATCAGAGAGGACACTGTTATCTTCCTCTTCACTGAGAGTTCACTAGTCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGAAAGTGAGAACATACTCAAGTCCTGTCCGAGGCATTCCCAGCTCCAATGGCCAGCGTCCTCTCTaGAGAAGGCTTGTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQKVRTYSSPVRGIPSSNGQRPL*RRLVLR Trigger: TCTCAAGACAAGCCTTCTCCAGAGAGGACGCTGGCC...ATTGGAGCTGGGAATGCCTCGGACAGGACTTGAGTATGTTCTCACTTTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGTCCAGGAGGAGGTGGTGGTaGTGGTGCTACAGTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLCKPTGEPGVFLNSLSRRRWW*WCYSNR Trigger: TCTGTTACTGTAGCACCACCACCACCACCTCCTCCT...GGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGGGAGAAGGCTTGTCTTaGGACAGGCTTGGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLGEGLS*DRLGKE Trigger: TTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCC...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGGGACTCCATTCTGTTaGATGGCTGGTAAGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVISPRQTQLCKPTGEPGGTPFC*MAGKLK Trigger: TTTCAGCTTACCAGCCATGCAACAGAATGGAGTCCC...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTAGTGAACTCTCAGTGAAGAGGAAGATAACAGTGTCCTCTCTGATGCCAGCACTTGGACTCTGTTaGTCCTGCAGGGTCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTSELSVKRKITVSSLMPALGLC*SCRVTI Trigger: GATTGTGACCCTGCAGGAGCAACAGAGTCCAAGTGC...TGGCATCAGAGAGGACACTGTTATCTTCCTCTTCACTGAGAGTTCACTAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAAGCACTTGGACTCTGTTaGTCCTGCAGGGTCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLTPLVGLRRKETNEALGLC*SCRVTI Trigger: GATTGTGACCCTGCAGGAGCAACAGAGTCCAAGTGC...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | TCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACACAGGTGGTGGTGGTGGTaGTACAGTAACAGATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLTPLVGLRRKETNEHRWWWW*YSNRCG Trigger: TCCACATCTGTTACTGTAGCACCACCACCACCACCT...GTGTTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGGTCTTGAGACAGGCTTaGGAAGGAAGTGTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLVLRQA*EGSVPA Trigger: AGCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGAC...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | TGTAAATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGACAGGAGGTGGTGGTGGTaGTGCTACAGTAACAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CKWPSWSSLPSNRKQHRDRRWWW*CYSNRC Trigger: ACATCTGTTACTGTAGCACCACCACCACCACCTCCT...GTCTCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAAAGGAGGAGGTGGTGGTaGTGGTGCTACAGTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLTPLVGLRRKETNERRRWW*WCYSNR Trigger: TCTGTTACTGTAGCACCACCACCACCACCTCCTCCT...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTAAATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGGGACTCCATTCTGTTaGATGGCTGGTAAGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCKWPSWSSLPSNRKQHRGTPFC*MAGKLK Trigger: TTTCAGCTTACCAGCCATGCAACAGAATGGAGTCCC...TCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATTTACACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTAGTGAACTCTCAGTGAAGAGGAAGATAACAGTGTCCTCTCTGATGCCAAGGTGGTGGTGGTGGTaGTACAGTAACAGATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSELSVKRKITVSSLMPRWWWW*YSNRCG Trigger: TCCACATCTGTTACTGTAGCACCACCACCACCACCT...TGGCATCAGAGAGGACACTGTTATCTTCCTCTTCACTGAGAGTTCACTAGTCAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGAGGAGGTGGTGGTGGTaGTGCTACAGTAACAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLRRWWW*CYSNRC Trigger: ACATCTGTTACTGTAGCACCACCACCACCACCTCCT...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGAAAGTGAGAACATACTCAAGTCCTGTCCGAGGCATTCCCAGCTCCAATTGCCCTGAGTCTTATTaGGCACTCTCCTTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQKVRTYSSPVRGIPSSNCPESY*ALSFFS Trigger: ACTGAAGAAGGAGAGTGCTCAATAAGACTCAGGGCA...ATTGGAGCTGGGAATGCCTCGGACAGGACTTGAGTATGTTCTCACTTTCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATAACAGTGTCCTCTCTGATGCCATTCATGGTGAAATGTGTGCACAGATTGGAGAAGGCTTGTCTTaGGACAGGCTTGGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EDNSVLSDAIHGEMCAQIGEGLS*DRLGKE Trigger: TTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCC...AATCTGTGCACACATTTCACCATGAATGGCATCAGAGAGGACACTGTTATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | AAATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGACTCAACTCTCCTTCTTCAGTaGCTACCAATCCAACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KWPSWSSLPSNRKQHRDSTLLLQ*LPIQHQ Trigger: CTGATGTTGGATTGGTAGCCACTGAAGAAGGAGAGT...TGAGTCTCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAAGATCTCAAGCATATTTaGCATGTCAGGCTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAFTASYSSSWAQKEGDQDLKHI*HVRLLW Trigger: CCAAAGAAGCCTGACATGCCAAATATGCTTGAGATC...TTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGAAGTCTTTCCAGCACTaGGTCTCTGCTCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLKSFQH*VSALFF Trigger: AAAGAAGAGAGCAGAGACTCAGTGCTGGAAAGACTT...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAAAAGTCTTTCCAGCACTaGGTCTCTGCTCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLTPLVGLRRKETNEKSFQH*VSALFF Trigger: AAAGAAGAGAGCAGAGACTCAGTGCTGGAAAGACTT...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAATTGAGAAAATGCCTCCATAAGATCTGGCTGCAAGGCCTTCTCTTAATTAGGAGGTGGTGGTGGTaGTGCTACAGTAACAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PQLRKCLHKIWLQGLLLIRRWWW*CYSNRC Trigger: ACATCTGTTACTGTAGCACCACCACCACCACCTCCT...AATTAAGAGAAGGCCTTGCAGCCAGATCTTATGGAGGCATTTTCTCAATTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGATCTCAAGCATATTTaGCATGTCAGGCTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSLLLTPLVGLRRKETNDLKHI*HVRLLW Trigger: CCAAAGAAGCCTGACATGCCAAATATGCTTGAGATC...ATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGACTCAGCTTTCAGTTTCTCCTTaGCTATTGTGTCGATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGLPGPHFPLTESNTETQLSVSP*LLCRYA Trigger: TGCATATCGACACAATAGCCAAGGAGAAACTGAAAG...CTGAGTCTCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGAAAACAGAAAGTGAGAACATACTCAAGTCCTGTCCGAGGCATTCCCAGTACGATACTTCGAGATaGACCATATGGTTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQKTESENILKSCPRHSQYDTSR*TIWFSR Trigger: TCTGGAAAACCATATGGTTCATCTCGAAGTATCGTA...CTGGGAATGCCTCGGACAGGACTTGAGTATGTTCTCACTTTCTGTTTTCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029129.10 ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATTACGATACTTCGAGATaGACCATATGGTTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSLLLTPLVGLRRKETNYDTSR*TIWFSR Trigger: TCTGGAAAACCATATGGTTCATCTCGAAGTATCGTA...ATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029129.10 ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACCAGCACTGAGTCTCTaGTCTCTTCTTTCTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLTPLVGLRRKETNEPALSL*SLLSLI Trigger: GATTAAAGAAAGAAGAGAGCAGAGACTCAGTGCTGG...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGCTATTGTGTCGATATaGAAACTTCTTTTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVISPRQTQLCKPTGEPGAIVSI*KLLFQS Trigger: GCTCTGAAAAAGAAGTTTGCATATCGACACAATAGC...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGGATCTCAAGCATATTTaGCATGTCAGGCTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLDLKHI*HVRLLW Trigger: CCAAAGAAGCCTGACATGCCAAATATGCTTGAGATC...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | GTGAAGAGGAAGATAACAGTGTCCTCTCTGATGCCATTCATGGTGAAATGTGTGCCAGCACTGAGTCTCTaGTCTCTTCTTTCTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VKRKITVSSLMPFMVKCVPALSL*SLLSLI Trigger: GATTAAAGAAAGAAGAGAGCAGAGACTCAGTGCTGG...CACACATTTCACCATGAATGGCATCAGAGAGGACACTGTTATCTTCCTCTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGCTTTCAGTTTCTCCTTaGCTATTGTGTCGATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLLSVSP*LLCRYA Trigger: TGCATATCGACACAATAGCCAAGGAGAAACTGAAAG...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAAGCTATTGTGTCGATATaGAAACTTCTTTTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLTPLVGLRRKETNEAIVSI*KLLFQS Trigger: GCTCTGAAAAAGAAGTTTGCATATCGACACAATAGC...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTAGTGAACTCTCAGTGAAGAGGAAGATAACAGTGTCCTCTCTGATGCCAGCTATTGTGTCGATATaGAAACTTCTTTTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSELSVKRKITVSSLMPAIVSI*KLLFQS Trigger: GCTCTGAAAAAGAAGTTTGCATATCGACACAATAGC...TGGCATCAGAGAGGACACTGTTATCTTCCTCTTCACTGAGAGTTCACTAGTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | TGTAAATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGACGAATCAGAGATAAGTTaGTACCAATTTTCCTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: CKWPSWSSLPSNRKQHRDESEIS*YQFSLR Trigger: TCGTAAGGAAAATTGGTACCAACTTATCTCTGATTC...GTCTCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | TCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACACGAATCAGAGATAAGTTaGTACCAATTTTCCTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLTPLVGLRRKETNEHESEIS*YQFSLR Trigger: TCGTAAGGAAAATTGGTACCAACTTATCTCTGATTC...GTGTTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029129.10 ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR GCA 90 bp | ATTCATGGTGAAATGTGTGCACAGATTTTAGTGTTAAGAACAGAACATGCACATAGGTGGTGGTGGTGGTaGTACAGTAACAGATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IHGEMCAQILVLRTEHAHRWWWW*YSNRCG Trigger: TCCACATCTGTTACTGTAGCACCACCACCACCACCT...ATGTGCATGTTCTGTTCTTAACACTAAAATCTGTGCACACATTTCACCATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGTGTGCACAGATTTTAGTGTTAAGAACAGAACATGCACATAGTACATGTTGCCCTGAGTCTTATTaGGCACTCTCCTTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EMCAQILVLRTEHAHSTCCPESY*ALSFFS Trigger: ACTGAAGAAGGAGAGTGCTCAATAAGACTCAGGGCA...ACATGTACTATGTGCATGTTCTGTTCTTAACACTAAAATCTGTGCACACATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATGGTGAAATGTGTGCACAGATTTTAGTGTTAAGAACAGAACATGCACATCAGTATCCGCTGGCCTaGGTTTTACATCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHGEMCAQILVLRTEHAHQYPLA*VLHLSL Trigger: CAGAGAAAGATGTAAAACCCAGGCCAGCGGATACTG...ATGTGCATGTTCTGTTCTTAACACTAAAATCTGTGCACACATTTCACCATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGTGTGCACAGATTTTAGTGTTAAGAACAGAACATGCACATAGTACATGTCAGTATCCGCTGGCCTaGGTTTTACATCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EMCAQILVLRTEHAHSTCQYPLA*VLHLSL Trigger: CAGAGAAAGATGTAAAACCCAGGCCAGCGGATACTG...ACATGTACTATGTGCATGTTCTGTTCTTAACACTAAAATCTGTGCACACATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| 3UTR CAA 72 bp | AAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATaGTCCATTAGGAGTCGGGAACATTTTCAATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPTGEPGVFLNS*SIRSREHFQLK Trigger: CTTTAATTGAAAATGTTCCCGACTCCTAATGGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGGAATTCCTCTTTCAGTTTCTCCTTGGCTATTGTGTCGATATGCAAACGAATCAGAGATAAGTTaGTACCAATTTTCCTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: GFGIPLSVSPWLLCRYANESEIS*YQFSLR Trigger: TCGTAAGGAAAATTGGTACCAACTTATCTCTGATTC...GTTTGCATATCGACACAATAGCCAAGGAGAAACTGAAAGAGGAATTCCAAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029129.10 |
||
| CDS-3UTR TCA 90 bp | GAAATGTGTGCACAGATTTTAGTGTTAAGAACAGAACATGCACATAGTACATGTTACGATACTTCGAGATaGACCATATGGTTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EMCAQILVLRTEHAHSTCYDTSR*TIWFSR Trigger: TCTGGAAAACCATATGGTTCATCTCGAAGTATCGTA...ACATGTACTATGTGCATGTTCTGTTCTTAACACTAAAATCTGTGCACACATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029129.10 ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGTGTGCACAGATTTTAGTGTTAAGAACAGAACATGCACATAGTACATGTGAATCAGAGATAAGTTaGTACCAATTTTCCTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: EMCAQILVLRTEHAHSTCESEIS*YQFSLR Trigger: TCGTAAGGAAAATTGGTACCAACTTATCTCTGATTC...ACATGTACTATGTGCATGTTCTGTTCTTAACACTAAAATCTGTGCACACATTTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029129.10 ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCAGACCTCCTGCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGTGTCTTGAGACAGGCTaGGGAAGGAAGTGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EARPPAAFTASYSSSWAQCLETG*GRKCAC Trigger: GCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACA...CTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGCAGGAGGTCTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCTGCCCTGCTTAGTCCCTGCCCTCAATGCTTGTGATGAAGAACTGCTACTAAGCAACCTGCACTaGGACTCTGTTGCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RALPCLVPALNACDEELLLSNLH*DSVAPA Trigger: TGCAGGAGCAACAGAGTCCAAGTGCAGGTTGCTTAG...TAGCAGTTCTTCATCACAAGCATTGAGGGCAGGGACTAAGCAGGGCAGGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCAGACCTCCTGCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGTGCACTTGGACTCTGTaGCTCCTGCAGGGTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: EARPPAAFTASYSSSWAQCTWTL*LLQGHN Trigger: ATTGTGACCCTGCAGGAGCAACAGAGTCCAAGTGCA...CTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGCAGGAGGTCTGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGTCTTGAGACAGGCTaGGGAAGGAAGTGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAFTASYSSSWAQKEGDQCLETG*GRKCAC Trigger: GCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACA...TTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGCACTTGGACTCTGTaGCTCCTGCAGGGTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: AAFTASYSSSWAQKEGDQCTWTL*LLQGHN Trigger: ATTGTGACCCTGCAGGAGCAACAGAGTCCAAGTGCA...TTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTTCTATAAGAAAGCAGGCTGAGCAGGCCATAGGAAGCAAGCCAGTAAGCTCTTTCTCTGACCTCTaGACTGACCGTAGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGSIRKQAEQAIGSKPVSSFSDL*TDRSFT Trigger: TGTGAAGCTACGGTCAGTCAAGAGGTCAGAGAAAGA...GCTTACTGGCTTGCTTCCTATGGCCTGCTCAGCCTGCTTTCTTATAGAACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCAGACCTCCTGCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGGCTGGTAAGCTGAAATaGAACTCTTGGACACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: EARPPAAFTASYSSSWAQAGKLK*NSWTLN Trigger: ATTCAGTGTCCAAGAGTTCAATTTCAGCTTACCAGC...CTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGCAGGAGGTCTGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAAAGTGAGAACATACTCAAGTCCTGTCCGAGGCATTCCCAGCTCCAATCTAAGCAACCTGCACTaGGACTCTGTTGCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KQKVRTYSSPVRGIPSSNLSNLH*DSVAPA Trigger: TGCAGGAGCAACAGAGTCCAAGTGCAGGTTGCTTAG...ATTGGAGCTGGGAATGCCTCGGACAGGACTTGAGTATGTTCTCACTTTCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGCTAAGCAACCTGCACTaGGACTCTGTTGCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLLSNLH*DSVAPA Trigger: TGCAGGAGCAACAGAGTCCAAGTGCAGGTTGCTTAG...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATCTTTCTCTGACCTCTaGACTGACCGTAGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AAFTASYSSSWAQKEGDQSFSDL*TDRSFT Trigger: TGTGAAGCTACGGTCAGTCAAGAGGTCAGAGAAAGA...TTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCAGACCTCCTGCTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGTCTTTCAGTTTCTCCTaGGCTATTGTGTCGATATGC | + |
|
Preference number: 5 (lower is better) Translates to: EARPPAAFTASYSSSWAQSFSFS*AIVSIC Trigger: GCATATCGACACAATAGCCAAGGAGAAACTGAAAGA...CTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAGCAGGAGGTCTGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | GAAGATAACAGTGTCCTCTCTGATGCCATTCATGGTGAAATGTGTGCACAGATTTGTCTTGAGACAGGCTaGGGAAGGAAGTGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EDNSVLSDAIHGEMCAQICLETG*GRKCAC Trigger: GCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACA...AATCTGTGCACACATTTCACCATGAATGGCATCAGAGAGGACACTGTTATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGATTTCTCCTAGACAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGACCTCTGACTCTGGCTTaGGAATTCCTCTTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVISPRQTQLCKPTGEPGPLTLA*EFLFQF Trigger: AAACTGAAAGAGGAATTCCAAAGCCAGAGTCAGAGG...TCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTGTCTAGGAGAAATCACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAATTGAGAAAATGCCTCCATAAGATCTGGCTGCAAGGCCTTCTCTTAATTTGCACTTGGACTCTGTaGCTCCTGCAGGGTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: PQLRKCLHKIWLQGLLLICTWTL*LLQGHN Trigger: ATTGTGACCCTGCAGGAGCAACAGAGTCCAAGTGCA...AATTAAGAGAAGGCCTTGCAGCCAGATCTTATGGAGGCATTTTCTCAATTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGTCCGGATCTCAAGCATATTaGGCATGTCAGGCTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TQLCKPTGEPGVFLNSLSGSQAY*ACQASL Trigger: CAAAGAAGCCTGACATGCCAAATATGCTTGAGATCC...GGACAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTAAATGGCCTTCCTGGTCCTCACTTCCCTCTAACAGAAAGCAACACAGAGGATCTCAAGCATATTaGGCATGTCAGGCTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCKWPSWSSLPSNRKQHRGSQAY*ACQASL Trigger: CAAAGAAGCCTGACATGCCAAATATGCTTGAGATCC...TCTGTGTTGCTTTCTGTTAGAGGGAAGTGAGGACCAGGAAGGCCATTTACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAATCTTTCTCTGACCTCTaGACTGACCGTAGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSLLLTPLVGLRRKETNESFSDL*TDRSFT Trigger: TGTGAAGCTACGGTCAGTCAAGAGGTCAGAGAAAGA...TTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | TCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGAACACCCTCTGACTCTGGCTTaGGAATTCCTCTTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLTPLVGLRRKETNEHPLTLA*EFLFQF Trigger: AAACTGAAAGAGGAATTCCAAAGCCAGAGTCAGAGG...GTGTTCATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAAAACAGAAAGTGAGAACATACTCAAGTCCTGTCCGAGGCATTCCCAGCCTCTGACTCTGGCTTaGGAATTCCTCTTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQKTESENILKSCPRHSQPLTLA*EFLFQF Trigger: AAACTGAAAGAGGAATTCCAAAGCCAGAGTCAGAGG...CTGGGAATGCCTCGGACAGGACTTGAGTATGTTCTCACTTTCTGTTTTCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTCACTGCTTCTTACTCCTCTAGTTGGGCTCAGAAGGAAGGAGACCAATGCTGGTAAGCTGAAATaGAACTCTTGGACACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSLLLTPLVGLRRKETNAGKLK*NSWTLN Trigger: ATTCAGTGTCCAAGAGTTCAATTTCAGCTTACCAGC...ATTGGTCTCCTTCCTTCTGAGCCCAACTAGAGGAGTAAGAAGCAGTGAAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCAGCTCTGCAAGCCAACTGGTGAACCAGGAGTCTTTCTGAATTCATTGGGATCTCAAGCATATTaGGCATGTCAGGCTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: QTQLCKPTGEPGVFLNSLGSQAY*ACQASL Trigger: CAAAGAAGCCTGACATGCCAAATATGCTTGAGATCC...CAATGAATTCAGAAAGACTCCTGGTTCACCAGTTGGCTTGCAGAGCTGAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
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| CDS-3UTR CAA 90 bp | AAACAGAAAGTGAGAACATACTCAAGTCCTGTCCGAGGCATTCCCAGCTCCAATTCTTTCAGTTTCTCCTaGGCTATTGTGTCGATATGC | + |
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Preference number: 5 (lower is better) Translates to: KQKVRTYSSPVRGIPSSNSFSFS*AIVSIC Trigger: GCATATCGACACAATAGCCAAGGAGAAACTGAAAGA...ATTGGAGCTGGGAATGCCTCGGACAGGACTTGAGTATGTTCTCACTTTCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117529.8 ENSMUST00000130645.8 |
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| CDS-3UTR CAA 90 bp | GAAATGTGTGCACAGATTTTAGTGTTAAGAACAGAACATGCACATAGTACATGTTCTTTCAGTTTCTCCTaGGCTATTGTGTCGATATGC | + |
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Preference number: 5 (lower is better) Translates to: EMCAQILVLRTEHAHSTCSFSFS*AIVSIC Trigger: GCATATCGACACAATAGCCAAGGAGAAACTGAAAGA...ACATGTACTATGTGCATGTTCTGTTCTTAACACTAAAATCTGTGCACACATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 |
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| CDS TCA 72 bp | GACAGCCTGGTCGACTGCATGCTGACCCCAACTCGCTaGAACCACATCCTCATCAGGCACTTAATCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: DSLVDCMLTPTR*NHILIRHLIQP Trigger: GGGCTGGATTAAGTGCCTGATGAGGATGTGGTTTCAGCGAGTTGGGGTCAGCATGCAGTCGACCAGGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138777.8 |
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| CDS TCA 72 bp | GACCATAGTACCGACTGCATGCTGACCCCAACTCGCTaGAACCACATCCTCATCAGGCACTTAATCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: DHSTDCMLTPTR*NHILIRHLIQP Trigger: GGGCTGGATTAAGTGCCTGATGAGGATGTGGTTTCAGCGAGTTGGGGTCAGCATGCAGTCGGTACTATGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029129.10 ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 ENSMUST00000130806.8 ENSMUST00000132035.2 |
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| CDS CCA 72 bp | GAAATTGAACTCTTGGACACTGAATCAGAGATAAGTTaGTACCAATTTTCCTTACGATACTTCGAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: EIELLDTESEIS*YQFSLRYFEMN Trigger: GTTCATCTCGAAGTATCGTAAGGAAAATTGGTACCAACTTATCTCTGATTCAGTGTCCAAGAGTTCAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029129.10 ENSMUST00000117529.8 ENSMUST00000119865.8 ENSMUST00000130645.8 ENSMUST00000130806.8 ENSMUST00000132035.2 |
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