Pregenerated sensors for MTF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029267Ensembl transcript IDs: ENSMUST00000081567.11, ENSMUST00000112626.8, ENSMUST00000124195.8, ENSMUST00000129921.3, ENSMUST00000134026.8, ENSMUST00000143412.8
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTaGACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: SYSQDAVAPSHSTRY*TFPSSVTRRAKTLY Trigger: ATACAGAGTTTTGGCTCGTCGGGTGACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR CCA 90 bp | ACCAGTCTCCAGGGCCTCCACAATAGCAGTAGCACTGCTGGACATTaGTTTTATGGCCTGCATCCCATTCAAGGTCAGCCACACTATAGG | + |
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Preference number: 1 (lower is better) Translates to: TSLQGLHNSSSTAGH*FYGLHPIQGQPHYR Trigger: CCTATAGTGTGGCTGACCTTGAATGGGATGCAGGCCATAAAACCAATGTCCAGCAGTGCTACTGCTATTGTGGAGGCCCTGGAGACTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR TCA 90 bp | TGTAGTTGTTGCAAAAACGCACTGTCGACAAAGCCACTTTTCATCTaGATCAATCACACTCGAGTCAATATGAGGTGTGTGACACAGCTG | + |
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Preference number: 1 (lower is better) Translates to: CSCCKNALSTKPLFI*INHTRVNMRCVTQL Trigger: CAGCTGTGTCACACACCTCATATTGACTCGAGTGTGATTGATTCAGATGAAAAGTGGCTTTGTCGACAGTGCGTTTTTGCAACAACTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR TCA 90 bp | TTCAAACTGATAATCTTCTTTGCCTTCATCATCTTTCACAACTTCTaGGTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: FKLIIFFAFIIFHNF*VLSLECSSWKATSS Trigger: AGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAACTCAGAAGTTGTGAAAGATGATGAAGGCAAAGAAGATTATCAGTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR TCA 90 bp | CCCTGTGCAATAAAAGACTTTGTTCATACTACGCTTACTCAAACATaGCTAACAGTTACTACAGACATTTCAGGAGTCTTCACTGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: PCAIKDFVHTTLTQT*LTVTTDISGVFTGL Trigger: GAGCCCAGTGAAGACTCCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACAAAGTCTTTTATTGCACAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| 3UTR TCA 90 bp | TTATCACATATAACCATTTCATTGGGAGCTTCTGAATACTCTTCTTaGCATATTGTACAGACCATTTCCCCACTCCCAGTGGCTCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: LSHITISLGASEYSS*HIVQTISPLPVAPV Trigger: AACAGGAGCCACTGGGAGTGGGGAAATGGTCTGTACAATATGTCAAGAAGAGTATTCAGAAGCTCCCAATGAAATGGTTATATGTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124195.8 |
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| 3UTR CCA 90 bp | TCAAACATGACTAACAGTTACTACAGACATTTCAGGAGTCTTCACTaGGCTCCCACAGACTTGCTGTTAAAACTGAGACATTTACAATCA | + |
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Preference number: 1 (lower is better) Translates to: SNMTNSYYRHFRSLH*APTDLLLKLRHLQS Trigger: TGATTGTAAATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | GATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCAGATTTGGGTGTGTCTaGCAGCTCTCCAGGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: DAVAPSHSTRYCTFPSSVRFGCV*QLSRVQ Trigger: TTGCACCCTGGAGAGCTGGCAGACACACCCAAATCT...GACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCACCCGTATTTTTCGCCACATaGTATTCTACCTGCGGCACC | + |
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Preference number: 2 (lower is better) Translates to: QSLLPIPQDTAPSHQASPVFFAT*YSTCGT Trigger: GGTGCCGCAGGTAGAATAGCATGTGGCGAAAAATAC...GGGTGACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTGAACATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATCTGGAGTGCTCTTCGTaGAAGGCGACCTCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: CSEHYVQSYSQDAVAPSHLECSS*KATSSS Trigger: AGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAG...ATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATGTTCACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGTCTGATAATCCACAATaGCTGGAAATGCTAGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: SESGVLFVEGDLFFSANVSDNPQ*LEMLAE Trigger: CTCGGCTAGCATTTCCAGGCATTGTGGATTATCAGA...CACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCTGATAATCCACAATaGCTGGAAATGCTAGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: RMQSLLPIPQDTAPSHQASDNPQ*LEMLAE Trigger: CTCGGCTAGCATTTCCAGGCATTGTGGATTATCAGA...CGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTTTCCCCACTCCCAGTaGCTCCTGTTTGGATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KPHLVAQEEHEFATQTNAFPHSQ*LLFGCP Trigger: AGGACATCCAAACAGGAGCCACTGGGAGTGGGGAAA...AGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124195.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCTGGACATTGGTTTTATaGCCTGCATCCCATTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QDAVAPSHSTRYCTFPSSWTLVL*PASHSR Trigger: CCTTGAATGGGATGCAGGCCATAAAACCAATGTCCA...GCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCCATTTTTCTTGTATATaGGCCAGGAGGACGACCTAC | + |
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Preference number: 2 (lower is better) Translates to: QDAVAPSHSTRYCTFPSSHFSCI*ARRTTY Trigger: GTAGGTCGTCCTCCTGGCCCATATACAAGAAAAATG...GCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGGTAACGGTAGACGTTTaGGGTATTCTGGTCCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TLRSVLQSGCSRSFPFHKVTVDV*GILVQN Trigger: GTTCTGGACCAGAATACCTCAAACGTCTACCGTTAC...CTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCGTTCTTTCTCTGCTTTaGAAGCCACATTTGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: VQSYSQDAVAPSHSTRYCVLSLL*KPHLVA Trigger: TGCCACCAAATGTGGCTTTCAAAGCAGAGAAAGAAC...GCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGATTGCTTACTTCCCTTaGGTCAGATGTAGGTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: SESGVLFVEGDLFFSANVIAYFP*VRCRFG Trigger: TCCAAACCTACATCTGACTCAAGGGAAGTAAGCAAT...CACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTGAACATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATACAACTTCTGAGTTCTaGGTCTGGAGTGCTCTTCGT | + |
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Preference number: 2 (lower is better) Translates to: CSEHYVQSYSQDAVAPSHTTSEF*VWSALR Trigger: ACGAAGAGCACTCCAGACTCAGAACTCAGAAGTTGT...ATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATGTTCACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATATTGGTTTTATGGCCTaGATCCCATTCAAGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSESGVLFVEGDLFFSANIGFMA*IPFKVS Trigger: GCTGACCTTGAATGGGATGCAGGCCATAAAACCAAT...ATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTTGGACATTGGTTTTATaGCCTGCATCCCATTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VLQSGCSRSFPFHKILHLWTLVL*PASHSR Trigger: CCTTGAATGGGATGCAGGCCATAAAACCAATGTCCA...AAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR CAA 90 bp | GTTTCGTTTGCACTGGAAGCACCCGTGAGGTCCACATCTGAGGTATaGGATGAATGTGCAATTCCCTCAGTTCTCCCTATAGAACAAGGT | + |
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Preference number: 2 (lower is better) Translates to: VSFALEAPVRSTSEV*DECAIPSVLPIEQG Trigger: ACCTTGTTCTATAGGGAGAACTGAGGGAATTGCACATTCATCCAATACCTCAGATGTGGACCTCACGGGTGCTTCCAGTGCAAACGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCCACCATGCATGGGTATaGATCATGTTTAATAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: QDAVAPSHSTRYCTFPSSHHAWV*IMFNSL Trigger: TAGGCTATTAAACATGATTCATACCCATGCATGGTG...GCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATCCTCTTTGTAGTTGTTaGAAAAACGCACTGTCGACA | + |
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Preference number: 2 (lower is better) Translates to: SSESGVLFVEGDLFFSANPLCSC*KNALST Trigger: TGTCGACAGTGCGTTTTTGCAACAACTACAAAGAGG...ATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCGCCACATGCTATTCTACCTGCGGCACCAAAATAACTAGTGATGGAGTTGTTCTGAGTCTGGAGTaGTCTTCGTGGAAGGCGACC | + |
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Preference number: 2 (lower is better) Translates to: FFATCYSTCGTKITSDGVVLSLE*SSWKAT Trigger: GGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAAC...AACTCCATCACTAGTTATTTTGGTGCCGCAGGTAGAATAGCATGTGGCGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGACATGCTATTCTACCTaGGGCACCAAAATAACTAGT | + |
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Preference number: 2 (lower is better) Translates to: RMQSLLPIPQDTAPSHQATCYST*GTKITS Trigger: ACTAGTTATTTTGGTGCCGCAGGTAGAATAGCATGT...CGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTGAACATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATAGAAAACGAGTGCAGTaGACATTACGTTCAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: CSEHYVQSYSQDAVAPSHRKRVQ*TLRSVL Trigger: TAGGACTGAACGTAATGTTCACTGCACTCGTTTTCT...ATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATGTTCACTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGCTTGTGCTATCTACATaGTCTGTTTGCTCTGATAAC | + |
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Preference number: 2 (lower is better) Translates to: LFFSANVVLQQAMIFLCELVLST*SVCSDN Trigger: GTTATCAGAGCAAACAGATCATGTAGATAGCACAAG...CTCGCACAGGAAGATCATGGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGGTAATGTCTGCTTCATaGCTTGCAATGCTTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: TLRSVLQSGCSRSFPFHKVMSAS*LAMLWH Trigger: ATGCCAAAGCATTGCAAGTCATGAAGCAGACATTAC...CTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | TCGTTTGCACTGGAAGCACCCGTGAGGTCCACATCTGAGGTATTGGATGAATGTTGGACACAAGCTTCATaGAACCACTGCTTACATTTG | + |
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Preference number: 2 (lower is better) Translates to: SFALEAPVRSTSEVLDECWTQAS*NHCLHL Trigger: CAAATGTAAGCAGTGGTTTCATGAAGCTTGTGTCCA...ACATTCATCCAATACCTCAGATGTGGACCTCACGGGTGCTTCCAGTGCAAACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGCGGTCTGCTTCATGACTTaGAATGCTTTGGCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: VTRRAKTLYFSPHAILPAVCFMT*NALAFG Trigger: ACCAAATGCCAAAGCATTGCAAGTCATGAAGCAGAC...CGCAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | GATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCTTACATTTGCAGCACTaGAGCATCTTTAAATACCAG | + |
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Preference number: 2 (lower is better) Translates to: DAVAPSHSTRYCTFPSSVLHLQH*SIFKYQ Trigger: CTGGTATTTAAAGATGCTGCAGTGCTGCAAATGTAA...GACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTTGGGTGTGTCTGCCAGCTCTCCAGGGTGCAATCTATCCCAGTTTTCATTCAATGCTTTGGCATTTaGTCCTTTCTTAAGCGCACC | + |
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Preference number: 2 (lower is better) Translates to: RFGCVCQLSRVQSIPVFIQCFGI*SFLKRT Trigger: GGTGCGCTTAAGAAAGGACCAAATGCCAAAGCATTG...AATGAAAACTGGGATAGATTGCACCCTGGAGAGCTGGCAGACACACCCAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTCCTCTTTGTAGTTGTTaGAAAAACGCACTGTCGACA | + |
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Preference number: 2 (lower is better) Translates to: KPHLVAQEEHEFATQTNAPLCSC*KNALST Trigger: TGTCGACAGTGCGTTTTTGCAACAACTACAAAGAGG...AGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTGTCTGCTTCATGACTTaGAATGCTTTGGCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: KPHLVAQEEHEFATQTNAVCFMT*NALAFG Trigger: ACCAAATGCCAAAGCATTGCAAGTCATGAAGCAGAC...AGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTTTTACCACTGCTTACATTTaGAGCACTGCAGCATCTTTA | + |
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Preference number: 2 (lower is better) Translates to: LRKCGIAAGHDLPVRVLFTTAYI*STAASL Trigger: TAAAGATGCTGCAGTGCTGCAAATGTAAGCAGTGGT...AAAAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACCACATTTGCGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR CCA 90 bp | CACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTCTTACGTTTGAGGTATTCTaGTCCAGAACTGCAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: HIWWHRRNTNSQPKQMLLTFEVF*SRTADR Trigger: TCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGT...AAGAAGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTCTTAGAAAACGAGTGCAGTaGACATTACGTTCAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: HIWWHRRNTNSQPKQMLLRKRVQ*TLRSVL Trigger: TAGGACTGAACGTAATGTTCACTGCACTCGTTTTCT...AAGAAGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | CATTTCAGGAGTCTTCACTGGGCTCCCACAGACTTGCTGTTAAAACTGAGACATAAGCCACTTTTCATCTaGATCAATCACACTCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: HFRSLHWAPTDLLLKLRHKPLFI*INHTRV Trigger: GACTCGAGTGTGATTGATTCAGATGAAAAGTGGCTT...ATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGCACCCGTGAGGTCCACATCTGAGGTATTGGATGAATGTGCAATTCCCCGCAACCCAAACAAATaGTTCTTCTTCTTTATTTCT | + |
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Preference number: 2 (lower is better) Translates to: LEAPVRSTSEVLDECAIPRNPNK*FFFFIS Trigger: AGAAATAAAGAAGAAGAAGCATTTGTTTGGGTTGCG...GGGAATTGCACATTCATCCAATACCTCAGATGTGGACCTCACGGGTGCTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | GTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCACGCTTACTCAAACATaGCTAACAGTTACTACAGAC | + |
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Preference number: 2 (lower is better) Translates to: VTRTEKPSKSPCTLLFTPTLTQT*LTVTTD Trigger: GTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGT...GGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTACCAACAGAAAACGAGTGCAGTGAACATTACGTTCAGTCCTACAGTCAGCTTGTGCTATCTACATaGTCTGTTTGCTCTGATAAC | + |
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Preference number: 2 (lower is better) Translates to: TVPTENECSEHYVQSYSQLVLST*SVCSDN Trigger: GTTATCAGAGCAAACAGATCATGTAGATAGCACAAG...CTGACTGTAGGACTGAACGTAATGTTCACTGCACTCGTTTTCTGTTGGTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGACGTTTGAGGTATTCTGGTCCAGAACTGCAGACAGAGCAAATAAATGTAGTAATGTCTGCTTCATaGCTTGCAATGCTTTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GRRLRYSGPELQTEQINVVMSAS*LAMLWH Trigger: ATGCCAAAGCATTGCAAGTCATGAAGCAGACATTAC...TACATTTATTTGCTCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGTCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGACGTTTGAGGTATTCTGGTCCAGAACTGCAGACAGAGCAAATAAATGTATGGACACAAGCTTCATaGAACCACTGCTTACATTTG | + |
|
Preference number: 2 (lower is better) Translates to: GRRLRYSGPELQTEQINVWTQAS*NHCLHL Trigger: CAAATGTAAGCAGTGGTTTCATGAAGCTTGTGTCCA...TACATTTATTTGCTCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGTCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGCACCCAATAAACGCCTaGGAAGAAATGCTGCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRHPINA*EEMLLC Trigger: ACACAGCAGCATTTCTTCTCAGGCGTTTATTGGGTG...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGAGAAAACGAGTGCAGTaGACATTACGTTCAGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRRKRVQ*TLRSVL Trigger: TAGGACTGAACGTAATGTTCACTGCACTCGTTTTCT...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGTAAAGCTCATTATACCTGGTTAACCAGGAACCAAAAGCAGGACAAGAAACACCATGCATGGGTATaGATCATGTTTAATAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LCKAHYTWLTRNQKQDKKHHAWV*IMFNSL Trigger: TAGGCTATTAAACATGATTCATACCCATGCATGGTG...TTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATGAGCTTTACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| 3UTR-3UTR TCA 90 bp | CACCCTTCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCTTGTGCTATCTACATaGTCTGTTTGCTCTGATAAC | + |
|
Preference number: 2 (lower is better) Translates to: HPSSVHTKLDTFLFIHSKLVLST*SVCSDN Trigger: GTTATCAGAGCAAACAGATCATGTAGATAGCACAAG...CTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGTAAAGCTCATTATACCTGGTTAACCAGGAACCAAAAGCAGGACAAGAAAACGCTTACTCAAACATaGCTAACAGTTACTACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LCKAHYTWLTRNQKQDKKTLTQT*LTVTTD Trigger: GTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGT...TTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATGAGCTTTACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTTTTTCTAGAGTCTGATAATCCACAATGCCTGGAAATGCTAGCCGAGGTACGCAACCCAAACAAATaGTTCTTCTTCTTTATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VLFLESDNPQCLEMLAEVRNPNK*FFFFIS Trigger: AGAAATAAAGAAGAAGAAGCATTTGTTTGGGTTGCG...TACCTCGGCTAGCATTTCCAGGCATTGTGGATTATCAGACTCTAGAAAAAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCCTTCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGATATTAAGACGACAATaGAGTCTAGTCACAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HPSSVHTKLDTFLFIHSKILRRQ*SLVTEQ Trigger: TTGCTCTGTGACTAGACTTCATTGTCGTCTTAATAT...CTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTTCAAACTGATAATCTTCTTTGCCTTCATCATCTTTCACAACTTCTGAGTAAGCCACTTTTCATCTaGATCAATCACACTCGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VLQTDNLLCLHHLSQLLSKPLFI*INHTRV Trigger: GACTCGAGTGTGATTGATTCAGATGAAAAGTGGCTT...ACTCAGAAGTTGTGAAAGATGATGAAGGCAAAGAAGATTATCAGTTTGAAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR GCA 72 bp | CAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTaGACCTTCCCATCAAGCGTCACCCGACGAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QDAVAPSHSTRY*TFPSSVTRRAK Trigger: TTTGGCTCGTCGGGTGACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| 3UTR CCA 72 bp | CAGGGCCTCCACAATAGCAGTAGCACTGCTGGACATTaGTTTTATGGCCTGCATCCCATTCAAGGTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QGLHNSSSTAGH*FYGLHPIQGQP Trigger: TGGCTGACCTTGAATGGGATGCAGGCCATAAAACCAATGTCCAGCAGTGCTACTGCTATTGTGGAGGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGAGCCCATGTACACTGTaGTTCACACCCTTCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VLSLECSSWKATSSSPQMSPCTL*FTPFFS Trigger: ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCT...CATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGGCTTCTGAAGGCATaGGACACAAGCTTCATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSWKATSSSPQMWYCSRPWLLKA*DTSFMK Trigger: TTTCATGAAGCTTGTGTCCAATGCCTTCAGAAGCCA...TGGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAATGCCTGGAAATGCTAGCCGAGGTAGTTTCGTTTGCACTGGAAGCACCTGTCTGCTTCATGACTaGCAATGCTTTGGCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: STMPGNASRGSFVCTGSTCLLHD*QCFGIW Trigger: CCAAATGCCAAAGCATTGCAAGTCATGAAGCAGACA...GGTGCTTCCAGTGCAAACGAAACTACCTCGGCTAGCATTTCCAGGCATTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAATGCCTGGAAATGCTAGCCGAGGTAGTTTCGTTTGCACTGGAAGCACCTGTAACGGTAGACGTTaGAGGTATTCTGGTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: STMPGNASRGSFVCTGSTCNGRR*RYSGPE Trigger: TTCTGGACCAGAATACCTCAAACGTCTACCGTTACA...GGTGCTTCCAGTGCAAACGAAACTACCTCGGCTAGCATTTCCAGGCATTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCTCATATCTTTCAGATTaGGGTGTGTCTGCCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VQSYSQDAVAPSHSTRYCSYLSD*GVSASS Trigger: AGAGCTGGCAGACACACCCAAATCTGAAAGATATGA...GCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTAATGACTTGCAATGCTTaGGCATTTGGTCCTTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ESGVLFVEGDLFFSANVVMTCNA*AFGPFL Trigger: TAAGAAAGGACCAAATGCCAAAGCATTGCAAGTCAT...TACCACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTATTTGTCTGCTTCATGACTaGCAATGCTTTGGCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QDTAPSHQASPDEPKLCICLLHD*QCFGIW Trigger: CCAAATGCCAAAGCATTGCAAGTCATGAAGCAGACA...AATACAGAGTTTTGGCTCGTCGGGTGACGCTTGATGGGAAGGTGCAGTATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTTGCACTGGAAGCACCCGTGAGGTCCACATCTGAGGTATTGGATGAATGTGAGTCAGATGTAGGTTaGGATGCCTTTCTGCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SFALEAPVRSTSEVLDECESDVG*DAFLPL Trigger: TAAAGGCAGAAAGGCATCCAAACCTACATCTGACTC...ACATTCATCCAATACCTCAGATGTGGACCTCACGGGTGCTTCCAGTGCAAACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGTTTCTCCAAATACTaGTGCTATCTACATGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLSLECSSWKATSSSPQMCFSKY*CYLHDL Trigger: CAGATCATGTAGATAGCACAAGTATTTGGAGAAACA...CATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR TCA 72 bp | GGTGTGCTATATCTACCCACTGTAACGGTAGACGTTTaGGGTATTCTGGTCCAGAACTGCAGACAGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GVLYLPTVTVDV*GILVQNCRQSK Trigger: TTTGCTCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGTCTACCGTTACAGTGGGTAGATATAGCACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCATATAACCATTTCATaGGGAGCTTCTGAATACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRRPLLLRKCGIAAGHDLHITIS*GASEYS Trigger: AGAGTATTCAGAAGCTCCCAATGAAATGGTTATATG...AAGATCATGGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAGGTCGCCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124195.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTGTAACGGTAGACGTTaGAGGTATTCTGGTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VTRTEKPSKSPCTLLFTPCNGRR*RYSGPE Trigger: TTCTGGACCAGAATACCTCAAACGTCTACCGTTACA...GGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
||
| 3UTR CCA 72 bp | TTAATGCCTCCAGAACATGCTCATATCTTTCAGATTTaGGTGTGTCTGCCAGCTCTCCAGGGTGCAATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LMPPEHAHIFQI*VCLPALQGAIY Trigger: ATAGATTGCACCCTGGAGAGCTGGCAGACACACCCAAATCTGAAAGATATGAGCATGTTCTGGAGGCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTGCCCATTCCCATAATTaGTATTGCATAGGTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: KPHLVAQEEHEFATQTNAAHSHN*YCIGHI Trigger: TATGTGACCTATGCAATACAAATTATGGGAATGGGC...AGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTAGGGGAAATCAAGTTTaGGTGGAGGTGAACAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: STAELQGLKSPLKAHVHCRGNQV*VEVNRS Trigger: ACTTCTGTTCACCTCCACCAAAACTTGATTTCCCCT...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTCAGCTGATGATATCCTaGACCACACTTATCACATAT | + |
|
Preference number: 3 (lower is better) Translates to: KPHLVAQEEHEFATQTNAQLMIS*TTLITY Trigger: ATATGTGATAAGTGTGGTCAAGGATATCATCAGCTG...AGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR TCA 72 bp | TGCAAAAACGCACTGTCGACAAAGCCACTTTTCATCTaGATCAATCACACTCGAGTCAATATGAGGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CKNALSTKPLFI*INHTRVNMRCV Trigger: CACACACCTCATATTGACTCGAGTGTGATTGATTCAGATGAAAAGTGGCTTTGTCGACAGTGCGTTTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTTCAGGAGTCTTCACTGGGCTCCCACAGACTTGCTGTTAAAACTGAGACATCAGTACACACTAAACTaGACACATTTCTCTTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: HFRSLHWAPTDLLLKLRHQYTLN*THFSSY Trigger: GTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTG...ATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGTAAAGCTCATTATACCTGGTTAACCAGGAACCAAAAGCAGGACAAGAAAAGCCCATGTACACTGTaGTTCACACCCTTCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LCKAHYTWLTRNQKQDKKSPCTL*FTPFFS Trigger: ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCT...TTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATGAGCTTTACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGACGTTTGAGGTATTCTGGTCCAGAACTGCAGACAGAGCAAATAAATGTAACTCTTCTTGACATATaGTACAGACCATTTCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GRRLRYSGPELQTEQINVTLLDI*YRPFPH Trigger: GTGGGGAAATGGTCTGTACAATATGTCAAGAAGAGT...TACATTTATTTGCTCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGTCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124195.8 |
||
| 3UTR TCA 72 bp | ATAACCATTTCATTGGGAGCTTCTGAATACTCTTCTTaGCATATTGTACAGACCATTTCCCCACTCCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITISLGASEYSS*HIVQTISPLPV Trigger: CACTGGGAGTGGGGAAATGGTCTGTACAATATGTCAAGAAGAGTATTCAGAAGCTCCCAATGAAATGGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124195.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTTGTTTCTCCAAATACTaGTGCTATCTACATGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSCFSKY*CYLHDL Trigger: CAGATCATGTAGATAGCACAAGTATTTGGAGAAACA...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTTCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGGCCCATTCCCATAATTaGTATTGCATAGGTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: HPSSVHTKLDTFLFIHSKAHSHN*YCIGHI Trigger: TATGTGACCTATGCAATACAAATTATGGGAATGGGC...CTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGCAGCTGATGATATCCTaGACCACACTTATCACATAT | + |
|
Preference number: 3 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQQLMIS*TTLITY Trigger: ATATGTGATAAGTGTGGTCAAGGATATCATCAGCTG...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
||
| 3UTR TCA 72 bp | GAAGAAATGCTGCTGTGTAAATACTGCAACTATTCCTaGAATAAGAATTATGGGATATATACTCCAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEMLLCKYCNYS*NKNYGIYTPKL Trigger: CAGCTTTGGAGTATATATCCCATAATTCTTATTTCAGGAATAGTTGCAGTATTTACACAGCAGCATTTCTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR TCA 72 bp | ATAAAAGACTTTGTTCATACTACGCTTACTCAAACATaGCTAACAGTTACTACAGACATTTCAGGAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IKDFVHTTLTQT*LTVTTDISGVF Trigger: GAAGACTCCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACAAAGTCTTTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| 3UTR GCA 72 bp | CTTGCTGTTAAAACTGAGACATTTACAATCATAATGTaGCACAATCACTTGAAAACGTCACTTCTAATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LAVKTETFTIIM*HNHLKTSLLIG Trigger: TCCTATTAGAAGTGACGTTTTCAAGTGATTGTGGCACATTATGATTGTAAATGTCTCAGTTTTAACAGCAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCACCCTTTCCCCACTCCCAGTaGCTCCTGTTTGGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSLLPIPQDTAPSHQASPFPHSQ*LLFGCP Trigger: AGGACATCCAAACAGGAGCCACTGGGAGTGGGGAAA...GGGTGACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR TCA 90 bp | CGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCCGCTTGTGGACCAGTaGATTACCTGCTCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSVLQSGCSRSFPFHKILPLVDQ*ITCSCR Trigger: TCTACAGGAGCAGGTAATTCACTGGTCCACAAGCGG...CAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCGCTTGTGGACCAGTaGATTACCTGCTCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRRPLLLRKCGIAAGHDLPLVDQ*ITCSCR Trigger: TCTACAGGAGCAGGTAATTCACTGGTCCACAAGCGG...AAGATCATGGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAGGTCGCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR TCA 90 bp | CGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGAAGCCACTTTTCATCTaGATCAATCACACTCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSFPFHKILHLPIKRHPTKPLFI*INHTRV Trigger: GACTCGAGTGTGATTGATTCAGATGAAAAGTGGCTT...CGTCGGGTGACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGCTAGCCGAGGTAGTTTCGTTTGCACTGGAAGCACCCGTGAGGTCCACAGTAACGGTAGACGTTTaGGGTATTCTGGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EMLAEVVSFALEAPVRSTVTVDV*GILVQN Trigger: GTTCTGGACCAGAATACCTCAAACGTCTACCGTTAC...TGTGGACCTCACGGGTGCTTCCAGTGCAAACGAAACTACCTCGGCTAGCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR GCA 90 bp | CGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGGTCTGCTTCATGACTTaGAATGCTTTGGCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSFPFHKILHLPIKRHPTVCFMT*NALAFG Trigger: ACCAAATGCCAAAGCATTGCAAGTCATGAAGCAGAC...CGTCGGGTGACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR GCA 90 bp | TCTGCTTTGAAAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAGATTTGGGTGTGTCTaGCAGCTCTCCAGGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SALKATFGGTGGTRIRNPRFGCV*QLSRVQ Trigger: TTGCACCCTGGAGAGCTGGCAGACACACCCAAATCT...TGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTTTCAAAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129921.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAATGCTAGCCGAGGTAGTTTCGTTTGCACTGGAAGCACCCGTGAGGTCCAATGCTTTGGCATTTaGTCCTTTCTTAAGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PGNASRGSFVCTGSTREVQCFGI*SFLKRT Trigger: GGTGCGCTTAAGAAAGGACCAAATGCCAAAGCATTG...GACCTCACGGGTGCTTCCAGTGCAAACGAAACTACCTCGGCTAGCATTTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| 3UTR CAA 72 bp | GTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATaGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEGDLFFSANVV*QQAMIFLCEFF Trigger: AAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAGGTCGCCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | CATTTCAGGAGTCTTCACTGGGCTCCCACAGACTTGCTGTTAAAACTGAGACATCACTGGAAGCACCCGTaGGGTCCACATCTGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HFRSLHWAPTDLLLKLRHHWKHP*GPHLRY Trigger: ATACCTCAGATGTGGACCTCACGGGTGCTTCCAGTG...ATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CCA 90 bp | TCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCAACGTTTGAGGTATTCTaGTCCAGAACTGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWKATSSSPQMWYCSRPTFEVF*SRTADR Trigger: TCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGT...TGGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTGTTCTGAGTCTGGAGTaGTCTTCGTGGAAGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCVLSLE*SSWKAT Trigger: GGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAAC...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CCA 90 bp | ACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTAAAGGAGACCGCTTGTaGACCAGTGAATTACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFSPTVRMQSLLPIPQDTKGDRL*TSELPA Trigger: AGCAGGTAATTCACTGGTCCACAAGCGGTCTCCTTT...AGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR CCA 90 bp | GCGTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGAAAGGAGACCGCTTGTaGACCAGTGAATTACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPDEPKLCIFRHMLFYLKGDRL*TSELPA Trigger: AGCAGGTAATTCACTGGTCCACAAGCGGTCTCCTTT...CAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | GTGCGAGTTCTTTTTCTAGAGTCTGATAATCCACAATGCCTGGAAATGCTAGCCCCGCTTGTGGACCAGTaGATTACCTGCTCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRVLFLESDNPQCLEMLAPLVDQ*ITCSCR Trigger: TCTACAGGAGCAGGTAATTCACTGGTCCACAAGCGG...GGCTAGCATTTCCAGGCATTGTGGATTATCAGACTCTAGAAAAAGAACTCGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR GCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTAGATTTGGGTGTGTCTaGCAGCTCTCCAGGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCRFGCV*QLSRVQ Trigger: TTGCACCCTGGAGAGCTGGCAGACACACCCAAATCT...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR GCA 90 bp | GGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTCTTCTTCTTTATTACTCCCAGTGGCTCCTaGCTGTTTGGATGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGGTRIRNPNKCFFFFITPSGS*LFGCPS Trigger: GGAAGGACATCCAAACAGGCAGGAGCCACTGGGAGT...AATAAAGAAGAAGAAGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
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| CDS-3UTR CCA 90 bp | GTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGCGTGGACATTGGTTTTATaGCCTGCATCCCATTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRRAKTLYFSPHAILPAWTLVL*PASHSR Trigger: CCTTGAATGGGATGCAGGCCATAAAACCAATGTCCA...CGCAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR CCA 90 bp | TCGTTTGCACTGGAAGCACCCGTGAGGTCCACATCTGAGGTATTGGATGAATGTCATATCTTTCAGATTTaGGTGTGTCTGCCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFALEAPVRSTSEVLDECHIFQI*VCLPAL Trigger: CAGTGCTGGCAGACACACCCAAATCTGAAAGATATG...ACATTCATCCAATACCTCAGATGTGGACCTCACGGGTGCTTCCAGTGCAAACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTCGCCACATGCTATTCTACCTGCGGCACCAAAATAACTAGTGATGGAGTTTTTCCCCACTCCCAGTaGCTCCTGCCTGTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FFATCYSTCGTKITSDGVFPHSQ*LLPVWM Trigger: CATCCAAACAGGCAGGAGCCACTGGGAGTGGGGAAA...AACTCCATCACTAGTTATTTTGGTGCCGCAGGTAGAATAGCATGTGGCGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | TCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGCGGGTAATGTCTGCTTCATaGCTTGCAATGCTTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPDEPKLCIFRHMLFYLRVMSAS*LAMLWH Trigger: ATGCCAAAGCATTGCAAGTCATGAAGCAGACATTAC...CCGCAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR TCA 90 bp | TGCAGTGAACATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTGGACACAAGCTTCATaGAACCACTGCTTACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSEHYVQSYSQDAVAPSHWTQAS*NHCLHL Trigger: CAAATGTAAGCAGTGGTTTCATGAAGCTTGTGTCCA...ATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATGTTCACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTATTGCAGCAGGCCATaGTCTTCCTGTGCGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCYCSRP*SSCASS Trigger: AGAACTCGCACAGGAAGATCATGGCCTGCTGCAATA...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR GCA 90 bp | ACATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGCCTCTTTGTAGTTGTTaGAAAAACGCACTGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLRSVLQSGCSRSFPFHKPLCSC*KNALST Trigger: TGTCGACAGTGCGTTTTTGCAACAACTACAAAGAGG...CTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR GCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTGCCAGCTCTCCAGGGTaGAATCTATCCCAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSASSPG*NLSQFS Trigger: TGAAAACTGGGATAGATTGCACCCTGGAGAGCTGGC...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR GCA 90 bp | CCATTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAGCCAGCTCTCCAGGGTaGAATCTATCCCAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLTSLESDVGLDAFLPLASSPG*NLSQFS Trigger: TGAAAACTGGGATAGATTGCACCCTGGAGAGCTGGC...TAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129921.3 |
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| CDS-3UTR CCA 90 bp | CCATTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAAGCACTGCTGGACATTaGTTTTATGGCCTGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLTSLESDVGLDAFLPLSTAGH*FYGLHP Trigger: GGGATGCAGGCCATAAAACCAATGTCCAGCAGTGCT...TAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAATTCCCTCAGTTCTCCCTATAGAACAAGGTAAATCCAACGTAGGATTCTGGCTCCTGCCTGTTTaGATGTCCTTCCAGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: CAIPSVLPIEQGKSNVGFWLLPV*MSFQRT Trigger: GGTTCTCTGGAAGGACATCCAAACAGGCAGGAGCCA...GAATCCTACGTTGGATTTACCTTGTTCTATAGGGAGAACTGAGGGAATTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
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| 3UTR CAA 72 bp | AGGTGTGCTATATCTACCCACTGTAACGGTAGACGTTaGAGGTATTCTGGTCCAGAACTGCAGACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCAISTHCNGRR*RYSGPELQTEQ Trigger: TTGCTCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGTCTACCGTTACAGTGGGTAGATATAGCACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTCTTGTTCAAGGATGCTaGGGTCTTTTGGTTTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSLVQGC*GLLVST Trigger: CGTCGAAACCAAAAGACCTCAGCATCCTTGAACAAG...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | CCATTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAGTAACGGTAGACGTTTaGGGTATTCTGGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLTSLESDVGLDAFLPLVTVDV*GILVQN Trigger: GTTCTGGACCAGAATACCTCAAACGTCTACCGTTAC...TAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129921.3 ENSMUST00000134026.8 |
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| CDS-3UTR TCA 90 bp | GTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCAGTTTTTCAGGTGATTaGGCTGCAACTCCTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTRTEKPSKSPCTLLFTPSFSGD*AATPDL Trigger: CAGATCAGGAGTTGCAGCTCAATCACCTGAAAAACT...GGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTAAAGGAGACCGCTTGTaGACCAGTGAATTACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCKGDRL*TSELPA Trigger: AGCAGGTAATTCACTGGTCCACAAGCGGTCTCCTTT...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| CDS-3UTR CCA 90 bp | GTGCGAGTTCTTTTTCTAGAGTCTGATAATCCACAATGCCTGGAAATGCTAGCCAAAGGAGACCGCTTGTaGACCAGTGAATTACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVLFLESDNPQCLEMLAKGDRL*TSELPA Trigger: AGCAGGTAATTCACTGGTCCACAAGCGGTCTCCTTT...GGCTAGCATTTCCAGGCATTGTGGATTATCAGACTCTAGAAAAAGAACTCGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR CCA 90 bp | GTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTGGACATTGGTTTTATaGCCTGCATCCCATTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRTEKPSKSPCTLLFTPWTLVL*PASHSR Trigger: CCTTGAATGGGATGCAGGCCATAAAACCAATGTCCA...GGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAACGTTTGAGGTATTCTaGTCCAGAACTGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FESHIWWHRRNTNSQPKQTFEVF*SRTADR Trigger: TCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGT...TTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129921.3 ENSMUST00000134026.8 |
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| CDS-3UTR CCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTTTGAAAGCCACATTTaGTGGCACAGGAGGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCFESHI*WHRRNT Trigger: CGTGTTCCTCCTGTGCCACCAAATGTGGCTTTCAAA...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| 3UTR CAA 72 bp | TTTCATTGGGAGCTTCTGAATACTCTTCTTGACATATaGTACAGACCATTTCCCCACTCCCAGTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FHWELLNTLLDI*YRPFPHSQWLL Trigger: CAGGAGCCACTGGGAGTGGGGAAATGGTCTGTACAATATGTCAAGAAGAGTATTCAGAAGCTCCCAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124195.8 |
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| 3UTR CAA 72 bp | TTTAATGCCTCCAGAACATGCTCATATCTTTCAGATTaGGGTGTGTCTGCCAGCTCTCCAGGGTGCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: FNASRTCSYLSD*GVSASSPGCNL Trigger: TAGATTGCACCCTGGAGAGCTGGCAGACACACCCAAATCTGAAAGATATGAGCATGTTCTGGAGGCATTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | CACCCTTCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCCGCTTGTGGACCAGTaGATTACCTGCTCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPSSVHTKLDTFLFIHSKPLVDQ*ITCSCR Trigger: TCTACAGGAGCAGGTAATTCACTGGTCCACAAGCGG...CTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | TCGTTTGCACTGGAAGCACCCGTGAGGTCCACATCTGAGGTATTGGATGAATGTCTAGCTAAGACATCTTaGCCCTCTTCAAATTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SFALEAPVRSTSEVLDECLAKTS*PSSNLH Trigger: ATGTAAATTTGAAGAGGGTCAAGATGTCTTAGCTAG...ACATTCATCCAATACCTCAGATGTGGACCTCACGGGTGCTTCCAGTGCAAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTGTTCTTTCTCTGCTTTaGAAGCCACATTTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCVLSLL*KPHLVA Trigger: TGCCACCAAATGTGGCTTTCAAAGCAGAGAAAGAAC...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR TCA 90 bp | GTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCATTGCTTACTTCCCTTaGGTCAGATGTAGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTRTEKPSKSPCTLLFTPIAYFP*VRCRFG Trigger: TCCAAACCTACATCTGACTCAAGGGAAGTAAGCAAT...GGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | GCGTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGTTACATTTGCAGCACTaGAGCATCTTTAAATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASPDEPKLCIFRHMLFYLLHLQH*SIFKYQ Trigger: CTGGTATTTAAAGATGCTGCAGTGCTGCAAATGTAA...CAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGACGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR GCA 90 bp | CATTTCAGGAGTCTTCACTGGGCTCCCACAGACTTGCTGTTAAAACTGAGACATACCACTGCTTACATTTaGAGCACTGCAGCATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HFRSLHWAPTDLLLKLRHTTAYI*STAASL Trigger: TAAAGATGCTGCAGTGCTGCAAATGTAAGCAGTGGT...ATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | TTTGAAAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAACCACTGCTTACATTTaGAGCACTGCAGCATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FESHIWWHRRNTNSQPKQTTAYI*STAASL Trigger: TAAAGATGCTGCAGTGCTGCAAATGTAAGCAGTGGT...TTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGTAAAGCTCATTATACCTGGTTAACCAGGAACCAAAAGCAGGACAAGAAATTTCCCCACTCCCAGTaGCTCCTGTTTGGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCKAHYTWLTRNQKQDKKFPHSQ*LLFGCP Trigger: AGGACATCCAAACAGGAGCCACTGGGAGTGGGGAAA...TTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATGAGCTTTACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTCATATCTTTCAGATTTaGGTGTGTCTGCCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCHIFQI*VCLPAL Trigger: GAGAGCTGGCAGACACACCCAAATCTGAAAGATATG...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTCATTTTTCTTGTATATaGGCCAGGAGGACGACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSHFSCI*ARRTTY Trigger: GTAGGTCGTCCTCCTGGCCCATATACAAGAAAAATG...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR TCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTAAGCCACTTTTCATCTaGATCAATCACACTCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCKPLFI*INHTRV Trigger: GACTCGAGTGTGATTGATTCAGATGAAAAGTGGCTT...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTGTCTGCTTCATGACTTaGAATGCTTTGGCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSVCFMT*NALAFG Trigger: ACCAAATGCCAAAGCATTGCAAGTCATGAAGCAGAC...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGCGAGGTAGTTTCGTTTaGACTGGAAGCACCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRRGSFV*TGSTRE Trigger: CTCACGGGTGCTTCCAGTGCAAACGAAACTACCTCG...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTCTTCTTCTTTATCATATCTTTCAGATTTaGGTGTGTCTGCCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WHRRNTNSQPKQMLLLLYHIFQI*VCLPAL Trigger: GAGAGCTGGCAGACACACCCAAATCTGAAAGATATG...ATAAAGAAGAAGAAGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129921.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTCCACATCTGAGGTATTaGATGAATGTGCAATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSPHLRY*MNVQFP Trigger: AGGGAATTGCACATTCATCCAATACCTCAGATGTGG...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGCTGGAGTGCTCTTCGTaGAAGGCGACCTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRLECSS*KATSSS Trigger: AGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAG...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR TCA 90 bp | CACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTCTTCTAGCTAAGACATCTTaGCCCTCTTCAAATTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: HIWWHRRNTNSQPKQMLLLAKTS*PSSNLH Trigger: ATGTAAATTTGAAGAGGGTCAAGATGTCTTAGCTAG...AAGAAGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR TCA 90 bp | GGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTTTTCTAGAGTCTGATCTAGCTAAGACATCTTaGCCCTCTTCAAATTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: GIAAGHDLPVRVLFLESDLAKTS*PSSNLH Trigger: ATGTAAATTTGAAGAGGGTCAAGATGTCTTAGCTAG...ATCAGACTCTAGAAAAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGTAAAGCTCATTATACCTGGTTAACCAGGAACCAAAAGCAGGACAAGAAAGTAACGGTAGACGTTTaGGGTATTCTGGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCKAHYTWLTRNQKQDKKVTVDV*GILVQN Trigger: GTTCTGGACCAGAATACCTCAAACGTCTACCGTTAC...TTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATGAGCTTTACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | TTTGAAAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAAATGCCTCCAGAACATaGTCATATCTTTCAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FESHIWWHRRNTNSQPKQNASRT*SYLSDL Trigger: CAAATCTGAAAGATATGAGCATGTTCTGGAGGCATT...TTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129921.3 ENSMUST00000134026.8 |
||
| CDS-3UTR GCA 90 bp | GTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGCACCCATCTGATAATCCACAATaGCTGGAAATGCTAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHTKLDTFLFIHSKQQHPSDNPQ*LEMLAE Trigger: CTCGGCTAGCATTTCCAGGCATTGTGGATTATCAGA...TGGGTGCTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTACATGCTATTCTACCTaGGGCACCAAAATAACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSTCYST*GTKITS Trigger: ACTAGTTATTTTGGTGCCGCAGGTAGAATAGCATGT...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGAGCACTGCTGGACATTaGTTTTATGGCCTGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQSTAGH*FYGLHP Trigger: GGGATGCAGGCCATAAAACCAATGTCCAGCAGTGCT...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR TCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTCTAGCTAAGACATCTTaGCCCTCTTCAAATTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSLAKTS*PSSNLH Trigger: ATGTAAATTTGAAGAGGGTCAAGATGTCTTAGCTAG...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGACAACTTCTGAGTTCTaGGTCTGGAGTGCTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRTTSEF*VWSALR Trigger: ACGAAGAGCACTCCAGACTCAGAACTCAGAAGTTGT...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR TCA 90 bp | CTTTGTAAAGCTCATTATACCTGGTTAACCAGGAACCAAAAGCAGGACAAGAAAATCTTTCACAACTTCTaGGTTCTGAGTCTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCKAHYTWLTRNQKQDKKIFHNF*VLSLEC Trigger: GCACTCCAGACTCAGAACTCAGAAGTTGTGAAAGAT...TTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATGAGCTTTACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR TCA 90 bp | GTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGCACCCATTGAGCTGCAACTCCTaGTCTGCTAAGTTATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHTKLDTFLFIHSKQQHPLSCNS*SAKLFR Trigger: TCTGAATAACTTAGCAGATCAGGAGTTGCAGCTCAA...TGGGTGCTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | CACCCTTCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGATTGGTTTTATGGCCTaGATCCCATTCAAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSSVHTKLDTFLFIHSKIGFMA*IPFKVS Trigger: GCTGACCTTGAATGGGATGCAGGCCATAAAACCAAT...CTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTTACATTTGCAGCACTaGAGCATCTTTAAATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: STAELQGLKSPLKAHVHCLHLQH*SIFKYQ Trigger: CTGGTATTTAAAGATGCTGCAGTGCTGCAAATGTAA...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | CCATTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAAATGCCTCCAGAACATaGTCATATCTTTCAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLTSLESDVGLDAFLPLNASRT*SYLSDL Trigger: CAAATCTGAAAGATATGAGCATGTTCTGGAGGCATT...TAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129921.3 ENSMUST00000134026.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGGTATTTTTCGCCACATaGTATTCTACCTGCGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRVFFAT*YSTCGT Trigger: GGTGCCGCAGGTAGAATAGCATGTGGCGAAAAATAC...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGCATTCCACAAGATACTaGACCTTCCCATCAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRHSTRY*TFPSSV Trigger: GACGCTTGATGGGAAGGTGCAGTATCTTGTGGAATG...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGGAAAGCCACATTTGGTaGCACAGGAGGAACACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQESHIW*HRRNTN Trigger: ATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTTTC...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTAGATGTAGGTTTGGATaGCTTTCTGCCTTTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSRCRFG*LSAFNF Trigger: AAAATTAAAGGCAGAAAGGCATCCAAACCTACATCT...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGGATGCTGAGGTCTTTTaGTTTCGACGTAAAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRDAEVF*FRRKGD Trigger: GTCTCCTTTACGTCGAAACCAAAAGACCTCAGCATC...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGCAATGCTTTGGCATTTaGTCCTTTCTTAAGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRQCFGI*SFLKRT Trigger: GGTGCGCTTAAGAAAGGACCAAATGCCAAAGCATTG...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGACGTTTGAGGTATTCTaGTCCAGAACTGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQTFEVF*SRTADR Trigger: TCTGTCTGCAGTTCTGGACCAGAATACCTCAAACGT...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| 3UTR CAA 72 bp | ACTGTTGTTCACACCCTTCTTCAGTACACACTAAACTaGACACATTTCTCTTCATACATAGCAAGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVVHTLLQYTLN*THFSSYIASNS Trigger: GCTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTGTGAACAACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGGTAATGTCTGCTTCATaGCTTGCAATGCTTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQVMSAS*LAMLWH Trigger: ATGCCAAAGCATTGCAAGTCATGAAGCAGACATTAC...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR TCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGTGGACACAAGCTTCATaGAACCACTGCTTACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRWTQAS*NHCLHL Trigger: CAAATGTAAGCAGTGGTTTCATGAAGCTTGTGTCCA...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGCCTCTTTGTAGTTGTTaGAAAAACGCACTGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRPLCSC*KNALST Trigger: TGTCGACAGTGCGTTTTTGCAACAACTACAAAGAGG...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CCA 90 bp | TTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAATTAGGAGGAGAGTGGTATaGTCTTGTAATCATTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLTSLESDVGLDAFLPLIRRRVV*SCNHLM Trigger: CATTAAATGATTACAAGACCATACCACTCTCCTCCT...AATTAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129921.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGAATGCCTCCAGAACATaGTCATATCTTTCAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQNASRT*SYLSDL Trigger: CAAATCTGAAAGATATGAGCATGTTCTGGAGGCATT...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGCGCAACCCAAACAAATaGTTCTTCTTCTTTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQRNPNK*FFFFIS Trigger: AGAAATAAAGAAGAAGAAGCATTTGTTTGGGTTGCG...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
||
| CDS-3UTR CAA 90 bp | GAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTACGTAAAGGAGACCGCTaGTGGACCAGTGAATTACCT | + |
|
Preference number: 5 (lower is better) Translates to: ESGVLFVEGDLFFSANVVRKGDR*WTSELP Trigger: AGGTAATTCACTGGTCCACAAGCGGTCTCCTTTACG...TACCACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCACGTAAAGGAGACCGCTaGTGGACCAGTGAATTACCT | + |
|
Preference number: 5 (lower is better) Translates to: SSWKATSSSPQMWYCSRPRKGDR*WTSELP Trigger: AGGTAATTCACTGGTCCACAAGCGGTCTCCTTTACG...TGGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGCAGAGAACCCAGGATTaGGAACTGTCCTCAAATATG | + |
|
Preference number: 5 (lower is better) Translates to: VLSLECSSWKATSSSPQMQRTQD*ELSSNM Trigger: CATATTTGAGGACAGTTCCAAATCCTGGGTTCTCTG...CATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR CAA 90 bp | AGGATGCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTGGCTTCTGAAGGCATaGGACACAAGCTTCATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RMQSLLPIPQDTAPSHQAWLLKA*DTSFMK Trigger: TTTCATGAAGCTTGTGTCCAATGCCTTCAGAAGCCA...CGCTTGATGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGAAATGCTAGCCGAGGTAGTTTCGTTTGCACTGGAAGCACCCGTGAGGTCATGACTTGCAATGCTTaGGCATTTGGTCCTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGNASRGSFVCTGSTREVMTCNA*AFGPFL Trigger: TAAGAAAGGACCAAATGCCAAAGCATTGCAAGTCAT...GACCTCACGGGTGCTTCCAGTGCAAACGAAACTACCTCGGCTAGCATTTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR CAA 90 bp | CATTACGTTCAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCATTCCACAAGACAGAGAACCCAGGATTaGGAACTGTCCTCAAATATG | + |
|
Preference number: 5 (lower is better) Translates to: HYVQSYSQDAVAPSHSTRQRTQD*ELSSNM Trigger: CATATTTGAGGACAGTTCCAAATCCTGGGTTCTCTG...TCTTGTGGAATGGGAAGGAGCGACTGCATCCTGACTGTAGGACTGAACGTAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR CAA 90 bp | GTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGCGAACCACTGCTTACATTaGCAGCACTGCAGCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTRRAKTLYFSPHAILPANHCLH*QHCSIF Trigger: AAAGATGCTGCAGTGCTGCAAATGTAAGCAGTGGTT...CGCAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS-3UTR CAA 90 bp | TCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGCGGTCATATCTTTCAGATTaGGGTGTGTCTGCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPDEPKLCIFRHMLFYLRSYLSD*GVSAST Trigger: AGTGCTGGCAGACACACCCAAATCTGAAAGATATGA...CCGCAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
||
| CDS CCA 90 bp | TGTCCATCCTGTAAAGACAGCTTGTTCAAGGATGCTGAGGTCTTTTaGTTTCGACGTAAAGGAGACCGCTTGTGGACCAGTGAATTACCT | + |
|
Preference number: 5 (lower is better) Translates to: CPSCKDSLFKDAEVF*FRRKGDRLWTSELP Trigger: AGGTAATTCACTGGTCCACAAGCGGTCTCCTTTACGTCGAAACCAAAAGACCTCAGCATCCTTGAACAAGCTGTCTTTACAGGATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081567.11 ENSMUST00000112626.8 ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTCGTAAAGGAGACCGCTaGTGGACCAGTGAATTACCT | + |
|
Preference number: 5 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSRKGDR*WTSELP Trigger: AGGTAATTCACTGGTCCACAAGCGGTCTCCTTTACG...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
||
| CDS-3UTR CAA 90 bp | AGCGCACCACCCCTCTTTGTAGTTGTTGCAAAAACGCACTGTCGACAAAGCCACTTACATGCTGGTTTTTaGGCTTTATGTCCATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPPLFVVVAKTHCRQSHLHAGF*ALCPSC Trigger: ACAGGATGGACATAAAGCCAAAAAACCAGCATGTAA...GTGGCTTTGTCGACAGTGCGTTTTTGCAACAACTACAAAGAGGGGTGGTGCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000124195.8 ENSMUST00000143412.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCTTTGAAAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAACTCTTCTTGACATATaGTACAGACCATTTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SALKATFGGTGGTRIRNPTLLDI*YRPFPH Trigger: GTGGGGAAATGGTCTGTACAATATGTCAAGAAGAGT...TGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTTTCAAAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | AAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTGTAACGGTAGACGTTaGAGGTATTCTGGTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KPHLVAQEEHEFATQTNACNGRR*RYSGPE Trigger: TTCTGGACCAGAATACCTCAAACGTCTACCGTTACA...AGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129921.3 ENSMUST00000134026.8 |
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| CDS-3UTR CAA 90 bp | TCTGCTTTGAAAGCCACATTTGGTGGCACAGGAGGAACACGAATTCGCAACCCATTACATGCTGGTTTTTaGGCTTTATGTCCATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SALKATFGGTGGTRIRNPLHAGF*ALCPSC Trigger: ACAGGATGGACATAAAGCCAAAAAACCAGCATGTAA...TGGGTTGCGAATTCGTGTTCCTCCTGTGCCACCAAATGTGGCTTTCAAAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | GTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTGTCTGCTTCATGACTaGCAATGCTTTGGCATTTGG | + |
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Preference number: 5 (lower is better) Translates to: VTRTEKPSKSPCTLLFTPCLLHD*QCFGIW Trigger: CCAAATGCCAAAGCATTGCAAGTCATGAAGCAGACA...GGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | CATTTCAGGAGTCTTCACTGGGCTCCCACAGACTTGCTGTTAAAACTGAGACATAACCACTGCTTACATTaGCAGCACTGCAGCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: HFRSLHWAPTDLLLKLRHNHCLH*QHCSIF Trigger: AAAGATGCTGCAGTGCTGCAAATGTAAGCAGTGGTT...ATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | CATTTCAGGAGTCTTCACTGGGCTCCCACAGACTTGCTGTTAAAACTGAGACATTGGCTTCTGAAGGCATaGGACACAAGCTTCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: HFRSLHWAPTDLLLKLRHWLLKA*DTSFMK Trigger: TTTCATGAAGCTTGTGTCCAATGCCTTCAGAAGCCA...ATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | GGTGGCACAGGAGGAACACGAATTCGCAACCCAAACAAATGCTTCTTCTTCTTTTGTAACGGTAGACGTTaGAGGTATTCTGGTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: GGTGGTRIRNPNKCFFFFCNGRR*RYSGPE Trigger: TTCTGGACCAGAATACCTCAAACGTCTACCGTTACA...AAAGAAGAAGAAGCATTTGTTTGGGTTGCGAATTCGTGTTCCTCCTGTGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129921.3 ENSMUST00000134026.8 |
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| CDS-3UTR CAA 90 bp | CATTTCAGGAGTCTTCACTGGGCTCCCACAGACTTGCTGTTAAAACTGAGACATTCATATCTTTCAGATTaGGGTGTGTCTGCCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HFRSLHWAPTDLLLKLRHSYLSD*GVSASS Trigger: AGAGCTGGCAGACACACCCAAATCTGAAAGATATGA...ATGTCTCAGTTTTAACAGCAAGTCTGTGGGAGCCCAGTGAAGACTCCTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | TTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAATTCGTAAAGGAGACCGCTaGTGGACCAGTGAATTACCT | + |
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Preference number: 5 (lower is better) Translates to: LLTSLESDVGLDAFLPLIRKGDR*WTSELP Trigger: AGGTAATTCACTGGTCCACAAGCGGTCTCCTTTACG...AATTAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTCAGAGAACCCAGGATTaGGAACTGTCCTCAAATATG | + |
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Preference number: 5 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSQRTQD*ELSSNM Trigger: CATATTTGAGGACAGTTCCAAATCCTGGGTTCTCTG...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | GGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTTTTCTAGAGTCTGATACTCTTCTTGACATATaGTACAGACCATTTCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GIAAGHDLPVRVLFLESDTLLDI*YRPFPH Trigger: GTGGGGAAATGGTCTGTACAATATGTCAAGAAGAGT...ATCAGACTCTAGAAAAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | CAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTATTCATATAACCATTTCATaGGGAGCTTCTGAATACTCT | + |
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Preference number: 5 (lower is better) Translates to: QDTAPSHQASPDEPKLCIHITIS*GASEYS Trigger: AGAGTATTCAGAAGCTCCCAATGAAATGGTTATATG...AATACAGAGTTTTGGCTCGTCGGGTGACGCTTGATGGGAAGGTGCAGTATCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR CAA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGGTGGCTCCTGCCTGTTaGGATGTCCTTCCAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQVAPAC*DVLPEN Trigger: GTTCTCTGGAAGGACATCCAAACAGGCAGGAGCCAC...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | TCAACAGCTGAGTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTACTCTTCTTGACATATaGTACAGACCATTTCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: STAELQGLKSPLKAHVHCTLLDI*YRPFPH Trigger: GTGGGGAAATGGTCTGTACAATATGTCAAGAAGAGT...ACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAACTCAGCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | GGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTTTTCTAGAGTCTGATCAGCTGATGATATCCTaGACCACACTTATCACATAT | + |
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Preference number: 5 (lower is better) Translates to: GIAAGHDLPVRVLFLESDQLMIS*TTLITY Trigger: ATATGTGATAAGTGTGGTCAAGGATATCATCAGCTG...ATCAGACTCTAGAAAAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR CAA 90 bp | GTTACAAGGACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTTGAATCATTTTTCTaGTATATGGGCCAGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VTRTEKPSKSPCTLLFTPFESFF*YMGQED Trigger: GTCCTCCTGGCCCATATACAAGAAAAATGATTCAAA...GGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGTCCTTGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | CACCCTTCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGTCCTGTAAAGACAGCTaGTTCAAGGATGCTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: HPSSVHTKLDTFLFIHSKSCKDS*FKDAEV Trigger: GACCTCAGCATCCTTGAACAAGCTGTCTTTACAGGA...CTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | GTGCGAGTTCTTTTTCTAGAGTCTGATAATCCACAATGCCTGGAAATGCTAGCCTTACATGCTGGTTTTTaGGCTTTATGTCCATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: VRVLFLESDNPQCLEMLALHAGF*ALCPSC Trigger: ACAGGATGGACATAAAGCCAAAAAACCAGCATGTAA...GGCTAGCATTTCCAGGCATTGTGGATTATCAGACTCTAGAAAAAGAACTCGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | TTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAATTTGTCTGCTTCATGACTaGCAATGCTTTGGCATTTGG | + |
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Preference number: 5 (lower is better) Translates to: LLTSLESDVGLDAFLPLICLLHD*QCFGIW Trigger: CCAAATGCCAAAGCATTGCAAGTCATGAAGCAGACA...AATTAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134026.8 |
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| CDS-3UTR CAA 90 bp | GTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGCACCCATGTAACGGTAGACGTTaGAGGTATTCTGGTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: VHTKLDTFLFIHSKQQHPCNGRR*RYSGPE Trigger: TTCTGGACCAGAATACCTCAAACGTCTACCGTTACA...TGGGTGCTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | TTGCTTACTTCCCTTGAGTCAGATGTAGGTTTGGATGCCTTTCTGCCTTTAATTTCATATCTTTCAGATTaGGGTGTGTCTGCCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LLTSLESDVGLDAFLPLISYLSD*GVSASS Trigger: AGAGCTGGCAGACACACCCAAATCTGAAAGATATGA...AATTAAAGGCAGAAAGGCATCCAAACCTACATCTGACTCAAGGGAAGTAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129921.3 |
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| CDS-3UTR CAA 90 bp | TCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGTCCGCAAATGTGGTATaGCAGCAGGCCATGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSVHTKLDTFLFIHSKQQSANVV*QQAMIF Trigger: GAAGATCATGGCCTGCTGCAATACCACATTTGCGGA...CTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | ACTGAAAAGCCCTCTAAAAGCCCATGTACACTGTTGTTCACACCCTTCTTCAGTCATATAACCATTTCATaGGGAGCTTCTGAATACTCT | + |
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Preference number: 5 (lower is better) Translates to: TEKPSKSPCTLLFTPFFSHITIS*GASEYS Trigger: AGAGTATTCAGAAGCTCCCAATGAAATGGTTATATG...ACTGAAGAAGGGTGTGAACAACAGTGTACATGGGCTTTTAGAGGGCTTTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | GTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAACAGCACCCATTACATGCTGGTTTTTaGGCTTTATGTCCATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: VHTKLDTFLFIHSKQQHPLHAGF*ALCPSC Trigger: ACAGGATGGACATAAAGCCAAAAAACCAGCATGTAA...TGGGTGCTGTTGCTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081567.11 ENSMUST00000143412.8 |
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| CDS-3UTR CAA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGGAGTCAGATGTAGGTTaGGATGCCTTTCTGCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRESDVG*DAFLPL Trigger: TAAAGGCAGAAAGGCATCCAAACCTACATCTGACTC...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | CACCCTTCTTCAGTACACACTAAACTTGACACATTTCTCTTCATACATAGCAAGCAGCTGATGATATCCTaGACCACACTTATCACATAT | + |
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Preference number: 5 (lower is better) Translates to: HPSSVHTKLDTFLFIHSKQLMIS*TTLITY Trigger: ATATGTGATAAGTGTGGTCAAGGATATCATCAGCTG...CTTGCTATGTATGAAGAGAAATGTGTCAAGTTTAGTGTGTACTGAAGAAGGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS-3UTR CAA 90 bp | TGTTCATACTACGCTTACTCAAACATGACTAACAGTTACTACAGACATTTCAGGATGACTTGCAATGCTTaGGCATTTGGTCCTTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: CSYYAYSNMTNSYYRHFRMTCNA*AFGPFL Trigger: TAAGAAAGGACCAAATGCCAAAGCATTGCAAGTCAT...CCTGAAATGTCTGTAGTAACTGTTAGTCATGTTTGAGTAAGCGTAGTATGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081567.11 |
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| CDS CCA 72 bp | GAGGTCTTTTGGTTTCGACGTAAAGGAGACCGCTTGTaGACCAGTGAATTACCTGCTCCTGTAGAGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: EVFWFRRKGDRL*TSELPAPVESL Trigger: GAGAGACTCTACAGGAGCAGGTAATTCACTGGTCCACAAGCGGTCTCCTTTACGTCGAAACCAAAAGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081567.11 ENSMUST00000112626.8 ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS CAA 72 bp | GCTGAGGTCTTTTGGTTTCGACGTAAAGGAGACCGCTaGTGGACCAGTGAATTACCTGCTCCTGTAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: AEVFWFRRKGDR*WTSELPAPVES Trigger: AGACTCTACAGGAGCAGGTAATTCACTGGTCCACAAGCGGTCTCCTTTACGTCGAAACCAAAAGACCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081567.11 ENSMUST00000112626.8 ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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| CDS CCA 72 bp | TGTAAAGACAGCTTGTTCAAGGATGCTGAGGTCTTTTaGTTTCGACGTAAAGGAGACCGCTTGTGGACCAGT | + |
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Preference number: 6 (lower is better) Translates to: CKDSLFKDAEVF*FRRKGDRLWTS Trigger: ACTGGTCCACAAGCGGTCTCCTTTACGTCGAAACCAAAAGACCTCAGCATCCTTGAACAAGCTGTCTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081567.11 ENSMUST00000112626.8 ENSMUST00000124195.8 ENSMUST00000134026.8 ENSMUST00000143412.8 |
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