Pregenerated sensors for MTERF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026273Ensembl transcript IDs: ENSMUST00000027492.14, ENSMUST00000112942.2, ENSMUST00000112944.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGATCTTCGTACTATACCTCAGGACTCTCACCCCCAAGCCGATGCTaGCACATTCCCATCTCCAGTTGGAGCCAGCCTGCTGTGTGGCGC | + |
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Preference number: 1 (lower is better) Translates to: GSSYYTSGLSPPSRC*HIPISSWSQPAVWR Trigger: GCGCCACACAGCAGGCTGGCTCCAACTGGAGATGGGAATGTGGCAGCATCGGCTTGGGGGTGAGAGTCCTGAGGTATAGTACGAAGATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR CCA 90 bp | CCCACAGGGGTGCTGGGGCACTGGGCATCCAGCTTAGGTGGGTTCTaGGGATCTGGACTCAGGTCCTCATACCAGCTTTGTTTGCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PTGVLGHWASSLGGF*GSGLRSSYQLCLLV Trigger: AACAAGCAAACAAAGCTGGTATGAGGACCTGAGTCCAGATCCCCAGAACCCACCTAAGCTGGATGCCCAGTGCCCCAGCACCCCTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR TCA 90 bp | CCTGAGGAAGAGGCACAGACAACTTTCCAAGAGGCCTCAGTTCTCTaGCCCTCTAAGCCTGAGCTCCACCAAATCAGGCCTCTCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: PEEEAQTTFQEASVL*PSKPELHQIRPLLQ Trigger: CTGGAGGAGAGGCCTGATTTGGTGGAGCTCAGGCTTAGAGGGTCAGAGAACTGAGGCCTCTTGGAAAGTTGTCTGTGCCTCTTCCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR GCA 90 bp | CGTTCCCCTCTACTGCCTATGGGATGTGGGGTAGAGAAGATGGCTTaGTACGTCCTGCTTTCTGTGGAGAGTCCAACAGGCAAGGACACG | + |
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Preference number: 1 (lower is better) Translates to: RSPLLPMGCGVEKMA*YVLLSVESPTGKDT Trigger: CGTGTCCTTGCCTGTTGGACTCTCCACAGAAAGCAGGACGTAGCAAGCCATCTTCTCTACCCCACATCCCATAGGCAGTAGAGGGGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR CCA 90 bp | AGAACAGGCAGAAGGCATTCGTTCCCCTCTACTGCCTATGGGATGTaGGGTAGAGAAGATGGCTTGCTACGTCCTGCTTTCTGTGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: RTGRRHSFPSTAYGM*GREDGLLRPAFCGE Trigger: CTCTCCACAGAAAGCAGGACGTAGCAAGCCATCTTCTCTACCCCACATCCCATAGGCAGTAGAGGGGAACGAATGCCTTCTGCCTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR GCA 90 bp | CCTGCCTCTGCCTCTGGAGTGCTAAGATTAAAGGAGTGCCCGCACTaGCATCACAGCTATGCACAAGTGCTTATGACCTATCTGTCACTA | + |
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Preference number: 1 (lower is better) Translates to: PASASGVLRLKECPH*HHSYAQVLMTYLSL Trigger: TAGTGACAGATAGGTCATAAGCACTTGTGCATAGCTGTGATGGCAGTGCGGGCACTCCTTTAATCTTAGCACTCCAGAGGCAGAGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR CCA 90 bp | ACCAACTGCCTCTCACTCTGCTGTACACTCAACACGTCAGAAGGCTaGGAAATGGTGTCAGATTTAGAAGCTGCCTATTGTGTGGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: TNCLSLCCTLNTSEG*EMVSDLEAAYCVGN Trigger: GTTTCCCACACAATAGGCAGCTTCTAAATCTGACACCATTTCCCAGCCTTCTGACGTGTTGAGTGTACAGCAGAGTGAGAGGCAGTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR CCA 90 bp | GATTGTCAGATGTCTGGAGGATTAAGGTCATCCTCACGTAAGCACTaGATTCAGTCTAAACACAAGGCCCACATTGGGTTTCGTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: DCQMSGGLRSSSRKH*IQSKHKAHIGFRVT Trigger: AGTCACACGAAACCCAATGTGGGCCTTGTGTTTAGACTGAATCCAGTGCTTACGTGAGGATGACCTTAATCCTCCAGACATCTGACAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR TCA 90 bp | GTCGGGCAATCATTCCAACTGGAGTGGAGAAAGACTTGCCTGTGCTaGGGAATTAGTATACATCATTCCAAACATGCTGTCTCTGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: VGQSFQLEWRKTCLC*GISIHHSKHAVSAF Trigger: GAAAGCAGAGACAGCATGTTTGGAATGATGTATACTAATTCCTCAGCACAGGCAAGTCTTTCTCCACTCCAGTTGGAATGATTGCCCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR GCA 90 bp | TGGAGTGCTAAGATTAAAGGAGTGCCCGCACTGCCATCACAGCTATaGACAAGTGCTTATGACCTATCTGTCACTAAACTTTTAGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: WSAKIKGVPALPSQL*TSAYDLSVTKLLGQ Trigger: TTGCCCTAAAAGTTTAGTGACAGATAGGTCATAAGCACTTGTGCATAGCTGTGATGGCAGTGCGGGCACTCCTTTAATCTTAGCACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR TCA 90 bp | TTCATGACTTCATCTTTACTACTACCTGGACATACAAAGTACTCCTaGGCCGAAAGGCACCTCTCTCTCCACATGGTTTTGGAACTAGCA | + |
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Preference number: 1 (lower is better) Translates to: FMTSSLLLPGHTKYS*AERHLSLHMVLELA Trigger: TGCTAGTTCCAAAACCATGTGGAGAGAGAGGTGCCTTTCGGCTCAGGAGTACTTTGTATGTCCAGGTAGTAGTAAAGATGAAGTCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR CCA 90 bp | CAGGTCCATTTACAACACACATTAGCTGTAGTCACAGTACTTTTGTaGGCCAGGTCTTTGAGCAGTTTCTCAGCTTTGGCATTGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: QVHLQHTLAVVTVLL*ARSLSSFSALALLC Trigger: ACAAAGCAATGCCAAAGCTGAGAAACTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAATGTGTGTTGTAAATGGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR CCA 90 bp | CTAACCCTCATGTTTCAATTTCATGACTTCATCTTTACTACTACCTaGACATACAAAGTACTCCTGAGCCGAAAGGCACCTCTCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LTLMFQFHDFIFTTT*TYKVLLSRKAPLSP Trigger: TGGAGAGAGAGGTGCCTTTCGGCTCAGGAGTACTTTGTATGTCCAGGTAGTAGTAAAGATGAAGTCATGAAATTGAAACATGAGGGTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR TCA 90 bp | GGAATCAGCAAACAGACAAGGTGGAGATTTATTTTTGTGTCCAACTaGAGTAATTATGAGTTGTTGGGCTCACCATTTGCTAATCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: GISKQTRWRFIFVSN*SNYELLGSPFANQN Trigger: GTTTTGATTAGCAAATGGTGAGCCCAACAACTCATAATTACTTCAGTTGGACACAAAAATAAATCTCCACCTTGTCTGTTTGCTGATTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGCTAGCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATGGGGTGCTGGGGCACTaGGCATCCAGCTTAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GQASWPTSLQGRPDSTSHGVLGH*ASSLGG Trigger: CCCACCTAAGCTGGATGCCCAGTGCCCCAGCACCCC...ATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGCTAGCCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGAGCTCAGAGGCCAGGCTAGCTGGCCCACAAGCCTCCAAGGACGCCCTACTCAGAGATCCGCCTaGCTCTGCCTCTGGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ASELRGQASWPTSLQGRPTQRSA*LCLWSA Trigger: AGCACTCCAGAGGCAGAGGCAGGCGGATCTCTGAGT...AGGGCGTCCTTGGAGGCTTGTGGGCCAGCTAGCCTGGCCTCTGAGCTCTGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR CAA 90 bp | AGGACTCTCACCCCCAAGCCGATGCTGCCACATTCCCATCTCCAGTaGGAGCCAGCCTGCTGTGTGGCGCTGTCGGGCAATCATTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: RTLTPKPMLPHSHLQ*EPACCVALSGNHSN Trigger: GTTGGAATGATTGCCCGACAGCGCCACACAGCAGGCTGGCTCCAACTGGAGATGGGAATGTGGCAGCATCGGCTTGGGGGTGAGAGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCTCTGACCCTCTAAGCCTGAGCTCCACCAAATCAGGCCTCTCCTCCAGCCCCAGTGCTCCCCAGTaGTGGTCTCTGAGCAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: QFSDPLSLSSTKSGLSSSPSAPQ*WSLSSS Trigger: TGAGCTGCTCAGAGACCAGCACTGGGGAGCACTGGG...GCTGGAGGAGAGGCCTGATTTGGTGGAGCTCAGGCTTAGAGGGTCAGAGAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATCTCCCCACAGGCCTGCCTCTGCCTCTaGAGTGCTAAGATTAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: AGPQASKDALTLPPISPQACLCL*SAKIKG Trigger: TCCTTTAATCTTAGCACTCCAGAGGCAGAGGCAGGC...CTGTGGGGAGATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATCTCCCCACAGTGGAGAGGAGAAAACTaGGGTGTTTTACTCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: AGPQASKDALTLPPISPQWRGEN*GVLLRG Trigger: GCCTCTGAGTAAAACACCTCAGTTTTCTCCTCTCCA...CTGTGGGGAGATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGCTAGCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATTACTTGGACCTGGAATaGGGCAGAGCTAAACAACAG | + |
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Preference number: 2 (lower is better) Translates to: GQASWPTSLQGRPDSTSHYLDLE*GRAKQQ Trigger: CTGTTGTTTAGCTCTGCCCCATTCCAGGTCCAAGTA...ATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGCTAGCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATCTCCCCACAGTTACCTACTTGGACCTaGAATGGGGCAGAGCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: AGPQASKDALTLPPISPQLPTWT*NGAELN Trigger: GTTTAGCTCTGCCCCATTCCAGGTCCAAGTAGGTAA...CTGTGGGGAGATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR CAA 90 bp | TCGTTCCCCTCTACTGCCTATGGGATGTGGGGTAGAGAAGATGGCTaGCTACGTCCTGCTTTCTGTGGAGAGTCCAACAGGCAAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: SFPSTAYGMWGREDG*LRPAFCGESNRQGH Trigger: GTGTCCTTGCCTGTTGGACTCTCCACAGAAAGCAGGACGTAGCAAGCCATCTTCTCTACCCCACATCCCATAGGCAGTAGAGGGGAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCAAGAACAGGCAGAAGGCATTCGTTCCCCTCTACTGCCTATGGGATGTGATCACATGGCTCCACTaGACACACTCCACACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TAKNRQKAFVPLYCLWDVITWLH*THSTLP Trigger: GGGCAGTGTGGAGTGTGTGCAGTGGAGCCATGTGAT...CACATCCCATAGGCAGTAGAGGGGAACGAATGCCTTCTGCCTGTTCTTGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAACAGCTTTGTCCACAGCCAAGAACAGGCAGAAGGCATTCGTTCCCCTCTAGAGGCCTCAGTTCTCTaGCCCTCTAAGCCTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SNSFVHSQEQAEGIRSPLEASVL*PSKPEL Trigger: GAGCTCAGGCTTAGAGGGTCAGAGAACTGAGGCCTC...TAGAGGGGAACGAATGCCTTCTGCCTGTTCTTGGCTGTGGACAAAGCTGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGAGCTCAGAGGCCAGGCTAGCTGGCCCACAAGCCTCCAAGGACGCCCTCATACCAGCTTTGTTTaGTTGTTTGGTTGGTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: ASELRGQASWPTSLQGRPHTSFV*LFGWFL Trigger: TAAAAACCAACCAAACAAGCAAACAAAGCTGGTATG...AGGGCGTCCTTGGAGGCTTGTGGGCCAGCTAGCCTGGCCTCTGAGCTCTGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCAGGTCTTTGAGCAGTTTCTCAGCTTTGGCATTGCTTTGTGGGCCTAATTTCTGCATCACCCTGTaGAGTTTCCTGAGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WARSLSSFSALALLCGPNFCITL*SFLRKR Trigger: CCTCTTCCTCAGGAAACTGCACAGGGTGATGCAGAA...ATTAGGCCCACAAAGCAATGCCAAAGCTGAGAAACTGCTCAAAGACCTGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR CCA 90 bp | GTAAGCAGCAAAGAATGGATCATTGTTCTCAAACAGCTTTGTCCACAGCCAAGAAGTGCTCCCCAGTGCTaGTCTCTGAGCAGCTCACTC | + |
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Preference number: 2 (lower is better) Translates to: VSSKEWIIVLKQLCPQPRSAPQC*SLSSSL Trigger: GAGTGAGCTGCTCAGAGACCAGCACTGGGGAGCACT...TCTTGGCTGTGGACAAAGCTGTTTGAGAACAATGATCCATTCTTTGCTGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR TCA 90 bp | ACAACACACATTAGCTGTAGTCACAGTACTTTTGTGGGCCAGGTCTTTGAGCAGAAGATCCTGAGGCCATaGCACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: TTHISCSHSTFVGQVFEQKILRP*HTHTHT Trigger: TGTGTGTGTGTGTGTGTGTCATGGCCTCAGGATCTT...CTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAATGTGTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTCTTTGTAAACACCCTCCTCTTTGCAGTCAGGTTCCAGGTAAGTCAAGAGCCTCACCTTGGTGCTaGTTCCTCACAAAATGCACC | + |
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Preference number: 2 (lower is better) Translates to: AFLCKHPPLCSQVPGKSRASPWC*FLTKCT Trigger: GGTGCATTTTGTGAGGAATCAGCACCAAGGTGAGGC...TCTTGACTTACCTGGAACCTGACTGCAAAGAGGAGGGTGTTTACAAAGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGAAGGCCAACTTGCCCAAGCAGGAAGGGTCAGCAACTGACAGAGAAGCAAACACGTCAGAAGGCTaGGAAATGGTGTCAGATTTA | + |
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Preference number: 2 (lower is better) Translates to: NMKANLPKQEGSATDREANTSEG*EMVSDL Trigger: TAAATCTGACACCATTTCCCAGCCTTCTGACGTGTT...TGCTTCTCTGTCAGTTGCTGACCCTTCCTGCTTGGGCAAGTTGGCCTTCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTCAGCTTTGGCATTGCTTTGTGGGCCTAATTATTCCTTATGCGGTGCAATCCCAGTACATCACATaGCTCCACTGCACACACTCC | + |
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Preference number: 2 (lower is better) Translates to: VSQLWHCFVGLIIPYAVQSQYIT*LHCTHS Trigger: GGAGTGTGTGCAGTGGAGCCATGTGATGTACTGGGA...TTGCACCGCATAAGGAATAATTAGGCCCACAAAGCAATGCCAAAGCTGAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR TCA 90 bp | ATAATTAAATCCCTCAAAACAGTCAGCGTCCACTTGGGAAATGTCATAGTGGAACGCCCTTGCCAGGAATaGGCTTGCCTCACATACCTG | + |
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Preference number: 2 (lower is better) Translates to: IIKSLKTVSVHLGNVIVERPCQE*ACLTYL Trigger: CAGGTATGTGAGGCAAGCTCATTCCTGGCAAGGGCG...TTCCACTATGACATTTCCCAAGTGGACGCTGACTGTTTTGAGGGATTTAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR GCA 90 bp | CATGACTTCATCTTTACTACTACCTGGACATACAAAGTACTCCTGAGCCGAAAGCCAACCTGGAAGGGTTaGACCCCCTGGATTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: HDFIFTTTWTYKVLLSRKPTWKG*TPWILT Trigger: TGTCAAAATCCAGGGGGTGCAACCCTTCCAGGTTGG...CTTTCGGCTCAGGAGTACTTTGTATGTCCAGGTAGTAGTAAAGATGAAGTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGTTTACCTACTTGGACCTGGAATGGGGCAGAGCTAAACAACAGGTTTGCTCAGCTTTAAAAACCTaGACACTCTGCCATCATCGG | + |
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Preference number: 2 (lower is better) Translates to: VKFTYLDLEWGRAKQQVCSALKT*TLCHHR Trigger: CCGATGATGGCAGAGTGTTCAGGTTTTTAAAGCTGA...GCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCAAGTAGGTAAACTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATTAAATCCCTCAAAACAGTCAGCGTCCACTTGGGAAATGTCATAGTGGAACCCTGTGCAGTTTCCTaGGGAAGAGGCACAGACAAC | + |
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Preference number: 2 (lower is better) Translates to: IIKSLKTVSVHLGNVIVEPCAVS*GRGTDN Trigger: GTTGTCTGTGCCTCTTCCTCAGGAAACTGCACAGGG...TTCCACTATGACATTTCCCAAGTGGACGCTGACTGTTTTGAGGGATTTAATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACAAAGCACCCCTCATTTaGTTTGGTTTATCTACCTGT | + |
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Preference number: 2 (lower is better) Translates to: FDSRVLYLGWSRASQRTHKAPLI*FGLSTC Trigger: ACAGGTAGATAAACCAAACCAAATGAGGGGTGCTTT...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
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| 3UTR CAA 90 bp | CAACACACATTAGCTGTAGTCACAGTACTTTTGTGGGCCAGGTCTTaGAGCAGTTTCTCAGCTTTGGCATTGCTTTGTGGGCCTAATTAT | + |
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Preference number: 2 (lower is better) Translates to: QHTLAVVTVLLWARS*SSFSALALLCGPNY Trigger: ATAATTAGGCCCACAAAGCAATGCCAAAGCTGAGAAACTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAATGTGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR CAA 90 bp | CATCAGGTCCATTTACAACACACATTAGCTGTAGTCACAGTACTTTaGTGGGCCAGGTCTTTGAGCAGTTTCTCAGCTTTGGCATTGCTT | + |
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Preference number: 2 (lower is better) Translates to: HQVHLQHTLAVVTVL*WARSLSSFSALALL Trigger: AAGCAATGCCAAAGCTGAGAAACTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAATGTGTGTTGTAAATGGACCTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTAGACAGAAATGATACATCAGGTCCATTTACAACACACATTAGCTGTAGTAGCCAGGAACCAACATaGAGGCCAACTTGCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: ALDRNDTSGPFTTHISCSSQEPT*RPTCPS Trigger: GCTTGGGCAAGTTGGCCTTCATGTTGGTTCCTGGCT...ACTACAGCTAATGTGTGTTGTAAATGGACCTGATGTATCATTTCTGTCTAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACTCAAAATACCAGTGTTaGGATCAAAAGTGCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FDSRVLYLGWSRASQRTHSKYQC*DQKCLR Trigger: TCTCAAGCACTTTTGATCCCAACACTGGTATTTTGA...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTTTGAGAAGATCCAGGTaGAGGTCCCCAGCACTTCGA | + |
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Preference number: 2 (lower is better) Translates to: IWFGLSTCISSGSLQVGFLRRSR*RSPALR Trigger: TCGAAGTGCTGGGGACCTTCACCTGGATCTTCTCAA...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
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| 3UTR-3UTR CCA 90 bp | ACAACACACATTAGCTGTAGTCACAGTACTTTTGTGGGCCAGGTCTTTGAGCAGAAAGCACCCCTCATTTaGTTTGGTTTATCTACCTGT | + |
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Preference number: 2 (lower is better) Translates to: TTHISCSHSTFVGQVFEQKAPLI*FGLSTC Trigger: ACAGGTAGATAAACCAAACCAAATGAGGGGTGCTTT...CTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAATGTGTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATGATACATCAGGTCCATTTACAACACACATTAGCTGTAGTCACAGTACTTGTCAGATTTAGAAGCTaGCTATTGTGTGGGAAACCT | + |
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Preference number: 2 (lower is better) Translates to: EMIHQVHLQHTLAVVTVLVRFRS*LLCGKP Trigger: AGGTTTCCCACACAATAGGCAGCTTCTAAATCTGAC...AAGTACTGTGACTACAGCTAATGTGTGTTGTAAATGGACCTGATGTATCATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAGACAGAAATGATACATCAGGTCCATTTACAACACACATTAGCTGTAGTAACCAAAAAGCTTTCTaGATCACCCTGTGCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: ALDRNDTSGPFTTHISCSNQKAF*ITLCSF Trigger: GAAACTGCACAGGGTGATGCAGAAAGCTTTTTGGTT...ACTACAGCTAATGTGTGTTGTAAATGGACCTGATGTATCATTTCTGTCTAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| 3UTR CCA 72 bp | CCCAGCAGTGCTTCAGAGCTCAGAGGCCAGGCTAGCTaGCCCACAAGCCTCCAAGGACGCCCTGACTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: PSSASELRGQAS*PTSLQGRPDST Trigger: GGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGCTAGCCTGGCCTCTGAGCTCTGAAGCACTGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| 3UTR GCA 72 bp | ATGCTGCCACATTCCCATCTCCAGTTGGAGCCAGCCTaGTGTGTGGCGCTGTCGGGCAATCATTCCAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: MLPHSHLQLEPA*CVALSGNHSNW Trigger: CCAGTTGGAATGATTGCCCGACAGCGCCACACAGCAGGCTGGCTCCAACTGGAGATGGGAATGTGGCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | GTGCTGGGGCACTGGGCATCCAGCTTAGGTGGGTTCTaGGGATCTGGACTCAGGTCCTCATACCAGCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VLGHWASSLGGF*GSGLRSSYQLC Trigger: ACAAAGCTGGTATGAGGACCTGAGTCCAGATCCCCAGAACCCACCTAAGCTGGATGCCCAGTGCCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| 3UTR TCA 72 bp | GGAGGCCTTGAAGTGGCAACCAGCCAGGAACCAACATaGAGGCCAACTTGCCCAAGCAGGAAGGGTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGLEVATSQEPT*RPTCPSRKGQQ Trigger: TTGCTGACCCTTCCTGCTTGGGCAAGTTGGCCTTCATGTTGGTTCCTGGCTGGTTGCCACTTCAAGGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR GCA 72 bp | TACTATACCTCAGGACTCTCACCCCCAAGCCGATGCTaGCACATTCCCATCTCCAGTTGGAGCCAGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YYTSGLSPPSRC*HIPISSWSQPA Trigger: AGCAGGCTGGCTCCAACTGGAGATGGGAATGTGGCAGCATCGGCTTGGGGGTGAGAGTCCTGAGGTATAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR GCA 72 bp | TCGTACTATACCTCAGGACTCTCACCCCCAAGCCGATaGTGCCACATTCCCATCTCCAGTTGGAGCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SYYTSGLSPPSR*CHIPISSWSQP Trigger: AGGCTGGCTCCAACTGGAGATGGGAATGTGGCAGCATCGGCTTGGGGGTGAGAGTCCTGAGGTATAGTACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCTCTGACCCTCTAAGCCTGAGCTCCACCAAATCAGGCCTCTCCTCCAGCAACATGAAGGCCAACTaGCCCAAGCAGGAAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QFSDPLSLSSTKSGLSSSNMKAN*PKQEGS Trigger: TGACCCTTCCTGCTTGGGCAAGTTGGCCTTCATGTT...GCTGGAGGAGAGGCCTGATTTGGTGGAGCTCAGGCTTAGAGGGTCAGAGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCCAACAGGCAAGGACACGCCCTTGCCAGGAATGAGCTTGCCTCACATACCGTAGTCACAGTACTTTaGTGGGCCAGGTCTTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ESNRQGHALARNELASHTVVTVL*WARSLS Trigger: GCTCAAAGACCTGGCCCACAAAAGTACTGTGACTAC...GGTATGTGAGGCAAGCTCATTCCTGGCAAGGGCGTGTCCTTGCCTGTTGGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR TCA 72 bp | GAGGCACAGACAACTTTCCAAGAGGCCTCAGTTCTCTaGCCCTCTAAGCCTGAGCTCCACCAAATCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAQTTFQEASVL*PSKPELHQIRP Trigger: AGGCCTGATTTGGTGGAGCTCAGGCTTAGAGGGTCAGAGAACTGAGGCCTCTTGGAAAGTTGTCTGTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR TCA 72 bp | AGCATCCCTGGCTCTGACCACAAGATCCTGAGGCCATaGCACACACACACACACACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: SIPGSDHKILRP*HTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATGGCCTCAGGATCTTGTGGTCAGAGCCAGGGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR GCA 72 bp | CCTGCCTCTGCCTCTGGAGTGCTAAGATTAAAGGAGTaGCCGCACTGCCATCACAGCTATGCACAAGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PASASGVLRLKE*PHCHHSYAQVL Trigger: AAGCACTTGTGCATAGCTGTGATGGCAGTGCGGGCACTCCTTTAATCTTAGCACTCCAGAGGCAGAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| 3UTR CCA 72 bp | AGAAGGCATTCGTTCCCCTCTACTGCCTATGGGATGTaGGGTAGAGAAGATGGCTTGCTACGTCCTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRHSFPSTAYGM*GREDGLLRPAF Trigger: GAAAGCAGGACGTAGCAAGCCATCTTCTCTACCCCACATCCCATAGGCAGTAGAGGGGAACGAATGCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAAGAATGGATCATTGTTCTCAAACAGCTTTGTCCACAGCCAAGAACAGGCTCCAACCTGGAAGGGTaGCACCCCCTGGATTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKEWIIVLKQLCPQPRTGSNLEG*HPLDFD Trigger: GTCAAAATCCAGGGGGTGCAACCCTTCCAGGTTGGA...GCCTGTTCTTGGCTGTGGACAAAGCTGTTTGAGAACAATGATCCATTCTTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR TCA 72 bp | GGTGCAATGTACAATATTTTACAGCATCCCTGGCTCTaGCCACAAGATCCTGAGGCCATGACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: GAMYNILQHPWL*PQDPEAMTHTH Trigger: GTGTGTGTGTGTCATGGCCTCAGGATCTTGTGGTCAGAGCCAGGGATGCTGTAAAATATTGTACATTGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR GCA 72 bp | GGACATGTTACTAACGTAACCAACTGCCTCTCACTCTaGTGTACACTCAACACGTCAGAAGGCTGGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: GHVTNVTNCLSL*CTLNTSEGWEM Trigger: CATTTCCCAGCCTTCTGACGTGTTGAGTGTACAGCAGAGTGAGAGGCAGTTGGTTACGTTAGTAACATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACCACCCCTCATTTGGTTaGGTTTATCTACCTGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: FDSRVLYLGWSRASQRTHHPSFG*VYLPVS Trigger: AGATACAGGTAGATAAACCAAACCAAATGAGGGGTG...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | GCCTCCCAAAGAACCCACAACAAAGCACCCCTCATTTaGTTTGGTTTATCTACCTGTATCTCCAGTGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: ASQRTHNKAPLI*FGLSTCISSGS Trigger: TGATCCACTGGAGATACAGGTAGATAAACCAAACCAAATGAGGGGTGCTTTGTTGTGGGTTCTTTGGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | CCAAGGGTTGTAAAGTTTACCTACTTGGACCTGGAATaGGGCAGAGCTAAACAACAGGTTTGCTTTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRVVKFTYLDLE*GRAKQQVCFGE Trigger: CTCTCCAAAGCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCAAGTAGGTAAACTTTACAACCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| 3UTR CCA 72 bp | CTCTCACTCTGCTGTACACTCAACACGTCAGAAGGCTaGGAAATGGTGTCAGATTTAGAAGCTGCCTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSLCCTLNTSEG*EMVSDLEAAYC Trigger: ACAATAGGCAGCTTCTAAATCTGACACCATTTCCCAGCCTTCTGACGTGTTGAGTGTACAGCAGAGTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR TCA 72 bp | TTTAAACACATGTGTGAGCATGCAGCTTGTTTTATCTaGGTATGTCCCAGCAGTGCTTCAGAGCTCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FKHMCEHAACFI*VCPSSASELRG Trigger: GCCTCTGAGCTCTGAAGCACTGCTGGGACATACTCAGATAAAACAAGCTGCATGCTCACACATGTGTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| 3UTR TCA 72 bp | TCATCTTTACTACTACCTGGACATACAAAGTACTCCTaGGCCGAAAGGCACCTCTCTCTCCACATGGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLLLPGHTKYS*AERHLSLHMVL Trigger: CAAAACCATGTGGAGAGAGAGGTGCCTTTCGGCTCAGGAGTACTTTGTATGTCCAGGTAGTAGTAAAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | ATGTCTGGAGGATTAAGGTCATCCTCACGTAAGCACTaGATTCAGTCTAAACACAAGGCCCACATTGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: MSGGLRSSSRKH*IQSKHKAHIGF Trigger: AAACCCAATGTGGGCCTTGTGTTTAGACTGAATCCAGTGCTTACGTGAGGATGACCTTAATCCTCCAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR GCA 72 bp | GTCAGAAGGCTGGGAAATGGTGTCAGATTTAGAAGCTaGCTATTGTGTGGGAAACCTGCTACTTGTTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VRRLGNGVRFRS*LLCGKPATCFH Trigger: ATGAAAACAAGTAGCAGGTTTCCCACACAATAGGCAGCTTCTAAATCTGACACCATTTCCCAGCCTTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | TTACAACACACATTAGCTGTAGTCACAGTACTTTTGTaGGCCAGGTCTTTGAGCAGTTTCTCAGCTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LQHTLAVVTVLL*ARSLSSFSALA Trigger: TGCCAAAGCTGAGAAACTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAATGTGTGTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR TCA 72 bp | TCATTCCAACTGGAGTGGAGAAAGACTTGCCTGTGCTaGGGAATTAGTATACATCATTCCAAACATGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SFQLEWRKTCLC*GISIHHSKHAV Trigger: GACAGCATGTTTGGAATGATGTATACTAATTCCTCAGCACAGGCAAGTCTTTCTCCACTCCAGTTGGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR GCA 72 bp | GCTTTGGCATTGCTTTGTGGGCCTAATTATTCCTTATaGGGTGCAATGTACAATATTTTACAGCATCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALALLCGPNYSL*GAMYNILQHPW Trigger: CCAGGGATGCTGTAAAATATTGTACATTGCACCGCATAAGGAATAATTAGGCCCACAAAGCAATGCCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATTCAGGGAGGAGAGTGTCGATCACAAAAAGACCACAAAATGGGAAGAGTACACCCCTCATTTGGTTaGGTTTATCTACCTGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: YIQGGECRSQKDHKMGRVHPSFG*VYLPVS Trigger: AGATACAGGTAGATAAACCAAACCAAATGAGGGGTG...TACTCTTCCCATTTTGTGGTCTTTTTGTGATCGACACTCTCCTCCCTGAATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | AAAGACCACAAAATGGGAAGAGTAAGCAGCAAAGAATaGATCATTGTTCTCAAACAGCTTTGTCCACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KDHKMGRVSSKE*IIVLKQLCPQP Trigger: TGGCTGTGGACAAAGCTGTTTGAGAACAATGATCCATTCTTTGCTGCTTACTCTTCCCATTTTGTGGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATTCAGGGAGGAGAGTGTCGATCACAAAAAGACCACAAAATGGGAAGAGTAGCAAAGAATGGATCATaGTTCTCAAACAGCTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: YIQGGECRSQKDHKMGRVAKNGS*FSNSFV Trigger: GACAAAGCTGTTTGAGAACAATGATCCATTCTTTGC...TACTCTTCCCATTTTGTGGTCTTTTTGTGATCGACACTCTCCTCCCTGAATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGGAATCAGCAAACAGACAAGGTGGAGATTTATTTTTGTGTCCAACTGAATTTAGAAGCTGCCTATaGTGTGGGAAACCTGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: IVESANRQGGDLFLCPTEFRSCL*CGKPAT Trigger: AGTAGCAGGTTTCCCACACAATAGGCAGCTTCTAAA...TTCAGTTGGACACAAAAATAAATCTCCACCTTGTCTGTTTGCTGATTCCACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | ATGTTTCAATTTCATGACTTCATCTTTACTACTACCTaGACATACAAAGTACTCCTGAGCCGAAAGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: MFQFHDFIFTTT*TYKVLLSRKAP Trigger: AGGTGCCTTTCGGCTCAGGAGTACTTTGTATGTCCAGGTAGTAGTAAAGATGAAGTCATGAAATTGAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTATCAAAATACCAGTGTaGGGATCAAAAGTGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IWFGLSTCISSGSLQVGFIKIPV*GSKVLE Trigger: CTCAAGCACTTTTGATCCCAACACTGGTATTTTGAT...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
||
| 3UTR TCA 72 bp | AAACAGACAAGGTGGAGATTTATTTTTGTGTCCAACTaGAGTAATTATGAGTTGTTGGGCTCACCATTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQTRWRFIFVSN*SNYELLGSPFA Trigger: AGCAAATGGTGAGCCCAACAACTCATAATTACTTCAGTTGGACACAAAAATAAATCTCCACCTTGTCTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CCA 72 bp | TTATTTTTGTGTCCAACTGAAGTAATTATGAGTTGTTaGGCTCACCATTTGCTAATCAAAACTGAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: LFLCPTEVIMSC*AHHLLIKTEDE Trigger: CTCATCTTCAGTTTTGATTAGCAAATGGTGAGCCCAACAACTCATAATTACTTCAGTTGGACACAAAAATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGAGCTCAGAGGCCAGGCTAGCTGGCCCACAAGCCTCCAAGGACGCCCTCCCGCTGATGCATGGTaGAAACCTCAGGGCAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASELRGQASWPTSLQGRPPADAW*KPQGKR Trigger: CCGTTTGCCCTGAGGTTTTCACCATGCATCAGCGGG...AGGGCGTCCTTGGAGGCTTGTGGGCCAGCTAGCCTGGCCTCTGAGCTCTGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATCTCCCCACAGATGCTGGAAAACTCTTaGAAGCTTCCTCTACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGPQASKDALTLPPISPQMLENS*KLPLPG Trigger: GCCCGGTAGAGGAAGCTTTCAAGAGTTTTCCAGCAT...CTGTGGGGAGATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATCTCCCCACAGGTCTGTGATGTGCTGTaGCGTGAACAAGCACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGPQASKDALTLPPISPQVCDVL*REQALL Trigger: GAGAAGTGCTTGTTCACGGCACAGCACATCACAGAC...CTGTGGGGAGATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGAACAGGCAGAAGGCATTCGTTCCCCTCTACTGCCTATGGGATGTGGGCCCGCTGATGCATGGTaGAAACCTCAGGGCAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEQAEGIRSPLLPMGCGPADAW*KPQGKR Trigger: CCGTTTGCCCTGAGGTTTTCACCATGCATCAGCGGG...CCCACATCCCATAGGCAGTAGAGGGGAACGAATGCCTTCTGCCTGTTCTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CAA 72 bp | AGTGGCAACCAGCCAGGAACCAACATGAAGGCCAACTaGCCCAAGCAGGAAGGGTCAGCAACTGACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGNQPGTNMKAN*PKQEGSATDRE Trigger: TTCTCTGTCAGTTGCTGACCCTTCCTGCTTGGGCAAGTTGGCCTTCATGTTGGTTCCTGGCTGGTTGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CAA 72 bp | CCAACAGGCAAGGACACGCCCTTGCCAGGAATGAGCTaGCCTCACATACCTGCCATAGTGAGAACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTGKDTPLPGMS*PHIPAIVRTVC Trigger: ACACACAGTTCTCACTATGGCAGGTATGTGAGGCAAGCTCATTCCTGGCAAGGGCGTGTCCTTGCCTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACCCCGCTGATGCATGGTaGAAACCTCAGGGCAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: FDSRVLYLGWSRASQRTHPADAW*KPQGKR Trigger: CCGTTTGCCCTGAGGTTTTCACCATGCATCAGCGGG...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCTCTTCCTCCTCAGATaGATGGCTCTCAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLDFDSRVLYLGWSRASLFLLR*MALRLL Trigger: GAGGAGTCTGAGAGCCATGCATCTGAGGAGGAAGAG...GGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAATCCTCCTCAGATGCATaGCTCTCAGACTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLDFDSRVLYLGWSRASQSSSDA*LSDSSS Trigger: GGAGGAGGAGTCTGAGAGCCATGCATCTGAGGAGGA...TTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCTTAGGGATCTGTGTCTaGCCCTTCTTATCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLDFDSRVLYLGWSRASLGICV*PFLSGV Trigger: GACCCCTGATAAGAAGGGGCAGACACAGATCCCTAA...GGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAACCTCCTGCAAAACAGTaGGGCATCTGTGCAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: PLDFDSRVLYLGWSRASQPPAKQ*GICAER Trigger: ACGTTCTGCACAGATGCCCCACTGTTTTGCAGGAGG...TTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGAACAGGCAGAAGGCATTCGTTCCCCTCTACTGCCTATGGGATGTGGGTGTATTCTAGCTCGTTaGGGTCCTCCTGCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQEQAEGIRSPLLPMGCGCILAR*GPPAKQ Trigger: CTGTTTTGCAGGAGGACCCCAACGAGCTAGAATACA...CCCACATCCCATAGGCAGTAGAGGGGAACGAATGCCTTCTGCCTGTTCTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAGGTCTTTGAGCAGTTTCTCAGCTTTGGCATTGCTTTGTGGGCCTAATTCCTCCTCAGATGCATaGCTCTCAGACTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WARSLSSFSALALLCGPNSSSDA*LSDSSS Trigger: GGAGGAGGAGTCTGAGAGCCATGCATCTGAGGAGGA...ATTAGGCCCACAAAGCAATGCCAAAGCTGAGAAACTGCTCAAAGACCTGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAATGCTGGAAAACTCTTaGAAGCTTCCTCTACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLDFDSRVLYLGWSRASQMLENS*KLPLPG Trigger: GCCCGGTAGAGGAAGCTTTCAAGAGTTTTCCAGCAT...TTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAATATGAGAATGACCTCTaGCACCCCAGTGCTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLDFDSRVLYLGWSRASQYENDL*HPSAVS Trigger: TGACACAGCACTGGGGTGTCAGAGGTCATTCTCATA...TTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACCCTCCTGCAAAACAGTaGGGCATCTGTGCAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: FDSRVLYLGWSRASQRTHPPAKQ*GICAER Trigger: ACGTTCTGCACAGATGCCCCACTGTTTTGCAGGAGG...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCTGTATTCTAGCTCGTTaGGGTCCTCCTGCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HPLDFDSRVLYLGWSRASCILAR*GPPAKQ Trigger: CTGTTTTGCAGGAGGACCCCAACGAGCTAGAATACA...GGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | TGGACCTGGAATGGGGCAGAGCTAAACAACAGGTTTGCTTTGGAGAGGAGAAAACGGTCAATGTCCCGCTaGTGCATGGTGAAAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WTWNGAELNNRFALERRKRSMSR*CMVKTS Trigger: TGAGGTTTTCACCATGCATCAGCGGGACATTGACCG...TTTTCTCCTCTCCAAAGCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR GCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACGTCTGTGATGTGCTGTaGCGTGAACAAGCACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FDSRVLYLGWSRASQRTHVCDVL*REQALL Trigger: GAGAAGTGCTTGTTCACGGCACAGCACATCACAGAC...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | TTACCTACTTGGACCTGGAATGGGGCAGAGCTAAACAACAGGTTTGCTTTGGAGCCTCCTGCAAAACAGTaGGGCATCTGTGCAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTWTWNGAELNNRFALEPPAKQ*GICAER Trigger: ACGTTCTGCACAGATGCCCCACTGTTTTGCAGGAGG...CTCCAAAGCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCAAGTAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR CCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACAGGAACAGGCTGTCCTaGCCAAAAACTCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FDSRVLYLGWSRASQRTHRNRLS*PKTQLQ Trigger: CTGAAGCTGAGTTTTTGGCCAGGACAGCCTGTTCCT...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
||
| CDS-3UTR TCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACCAGCTTCAGAAACTCTaGGAATGTTCCTCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDSRVLYLGWSRASQRTHQLQKL*ECSSVR Trigger: CCTCACTGAGGAACATTCTCAGAGTTTCTGAAGCTG...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
||
| CDS-3UTR GCA 90 bp | TGCAGTTTCCTGAGGAAGAGGCACAGACAACTTTCCAAGAGGCCTCAGTTCTCTGAACGCCTCTTCATCTaGATGCTAGACAGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSFLRKRHRQLSKRPQFSERLFI*MLDSFS Trigger: GCTGAAACTGTCTAGCATGCAGATGAAGAGGCGTTC...AGAGAACTGAGGCCTCTTGGAAAGTTGTCTGTGCCTCTTCCTCAGGAAACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CAA 72 bp | GGCCTCCCAAAGAACCCACAACAAAGCACCCCTCATTaGGTTTGGTTTATCTACCTGTATCTCCAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GLPKNPQQSTPH*VWFIYLYLQWI Trigger: GATCCACTGGAGATACAGGTAGATAAACCAAACCAAATGAGGGGTGCTTTGTTGTGGGTTCTTTGGGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAATCGTGTCCTGTTTTCTaGTTCCTGCATGTACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLDFDSRVLYLGWSRASQSCPVF*FLHVLL Trigger: CAAAAGTACATGCAGGAACCAGAAAACAGGACACGA...TTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAGTTTACCTACTTGGACCTGGAATGGGGCAGAGCTAAACAACAGGTTTGCGCAAAACCCATGTCCTaGAGGGAACGGATGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKFTYLDLEWGRAKQQVCAKPMS*RERMTF Trigger: AAAGGTCATCCGTTCCCTCCAGGACATGGGTTTTGC...GCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCAAGTAGGTAAACTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCCAAGAACAGGCAGAAGGCATTCGTTCCCCTCTACTGCCTATGGGATGTTTGAGGATGGACACTTaGCTGTATACTAAACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSQEQAEGIRSPLLPMGCLRMDT*LYTKQA Trigger: AGCTTGTTTAGTATACAGCCAAGTGTCCATCCTCAA...ACATCCCATAGGCAGTAGAGGGGAACGAATGCCTTCTGCCTGTTCTTGGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCAGCTTTGGCATTGCTTTGTGGGCCTAATTATTCCTTATGCGGTGCAAATGCTGGAAAACTCTTaGAAGCTTCCTCTACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSQLWHCFVGLIIPYAVQMLENS*KLPLPG Trigger: GCCCGGTAGAGGAAGCTTTCAAGAGTTTTCCAGCAT...TTGCACCGCATAAGGAATAATTAGGCCCACAAAGCAATGCCAAAGCTGAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAATACTAAACAAGCTGTaGATGTGGGCTTCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLDFDSRVLYLGWSRASQILNKL*MWASAK Trigger: TTTTGCTGAAGCCCACATTCACAGCTTGTTTAGTAT...TTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | AGGCACCTCTCTCTCCACATGGTTTTGGAACTAGCACAACTTATTTTAACAGAGTTGAGAAGATCCAGGTaGAGGTCCCCAGCACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLHMVLELAQLILTELRRSR*RSPALR Trigger: TCGAAGTGCTGGGGACCTTCACCTGGATCTTCTCAA...CTCTGTTAAAATAAGTTGTGCTAGTTCCAAAACCATGTGGAGAGAGAGGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTCAGATTTAGAAGCTGCCTATTGTGTGGGAAACCTGCTACTTGTTTTCATCTCTTCCTCCTCAGATaGATGGCTCTCAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVRFRSCLLCGKPATCFHLFLLR*MALRLL Trigger: GAGGAGTCTGAGAGCCATGCATCTGAGGAGGAAGAG...ATGAAAACAAGTAGCAGGTTTCCCACACAATAGGCAGCTTCTAAATCTGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGTGTCGATCACAAAAAGACCACAAAATGGGAAGAGTAAGCAGCAAAGCAAAACCCATGTCCTaGAGGGAACGGATGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGECRSQKDHKMGRVSSKAKPMS*RERMTF Trigger: AAAGGTCATCCGTTCCCTCCAGGACATGGGTTTTGC...TTTGCTGCTTACTCTTCCCATTTTGTGGTCTTTTTGTGATCGACACTCTCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGGTGGGTTCTGGGGATCTGGACTCAGGTCCTCATACCAGCTTTGTTTGTCACTTACTCTCACCTaGAATTTGTATTCTAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLGGFWGSGLRSSYQLCLSLTLT*NLYSSS Trigger: CGAGCTAGAATACAAATTCCAGGTGAGAGTAAGTGA...CAAACAAAGCTGGTATGAGGACCTGAGTCCAGATCCCCAGAACCCACCTAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| 3UTR CAA 72 bp | TTAGCTGTAGTCACAGTACTTTTGTGGGCCAGGTCTTaGAGCAGTTTCTCAGCTTTGGCATTGCTTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVVTVLLWARS*SSFSALALLCG Trigger: CCCACAAAGCAATGCCAAAGCTGAGAAACTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACTTGAGGATGGACACTTaGCTGTATACTAAACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FDSRVLYLGWSRASQRTHLRMDT*LYTKQA Trigger: AGCTTGTTTAGTATACAGCCAAGTGTCCATCCTCAA...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | TTACCTACTTGGACCTGGAATGGGGCAGAGCTAAACAACAGGTTTGCTTTGGAGATACTAAACAAGCTGTaGATGTGGGCTTCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTWTWNGAELNNRFALEILNKL*MWASAK Trigger: TTTTGCTGAAGCCCACATTCACAGCTTGTTTAGTAT...CTCCAAAGCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCAAGTAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR TCA 90 bp | AAACTGAGGTGTTTTACTCAGAGGCTTCAGACCCTATTCAGCTTTAAAAACCTGATACCCAGCAACTGTTaGGGATGGACACTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLRCFTQRLQTLFSFKNLIPSNC*GWTLGC Trigger: ACAGCCAAGTGTCCATCCTCAACAGTTGCTGGGTAT...CAGGTTTTTAAAGCTGAATAGGGTCTGAAGCCTCTGAGTAAAACACCTCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR CCA 90 bp | GTAAAGTTTACCTACTTGGACCTGGAATGGGGCAGAGCTAAACAACAGGTTTGCTCGTGTCCTGTTTTCTaGTTCCTGCATGTACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKFTYLDLEWGRAKQQVCSCPVF*FLHVLL Trigger: CAAAAGTACATGCAGGAACCAGAAAACAGGACACGA...GCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCAAGTAGGTAAACTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAACTGAAATATGCATACTaGAATTTGTATTCTAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLDFDSRVLYLGWSRASQLKYAY*NLYSSS Trigger: CGAGCTAGAATACAAATTCCAGTATGCATATTTCAG...TTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
||
| CDS-3UTR CCA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTTTCTTATCAGGGGTCTaGTACCGTCCAAGGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWFGLSTCISSGSLQVGFFLSGV*YRPRRS Trigger: GGAGCGCCTTGGACGGTACCAGACCCCTGATAAGAA...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
||
| 3UTR CAA 72 bp | CCCAAAGAACCCACAACAAAGCACCCCTCATTTGGTTaGGTTTATCTACCTGTATCTCCAGTGGATCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PKEPTTKHPSFG*VYLPVSPVDHY Trigger: GTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAATGAGGGGTGCTTTGTTGTGGGTTCTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | ATAATTAAATCCCTCAAAACAGTCAGCGTCCACTTGGGAAATGTCATAGTGGAAATACCCAGCAACTGTTaGGGATGGACACTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIKSLKTVSVHLGNVIVEIPSNC*GWTLGC Trigger: ACAGCCAAGTGTCCATCCTCAACAGTTGCTGGGTAT...TTCCACTATGACATTTCCCAAGTGGACGCTGACTGTTTTGAGGGATTTAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTCGGTCAATGTCCCGCTaGTGCATGGTGAAAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IWFGLSTCISSGSLQVGFRSMSR*CMVKTS Trigger: TGAGGTTTTCACCATGCATCAGCGGGACATTGACCG...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGGAATCAGCAAACAGACAAGGTGGAGATTTATTTTTGTGTCCAACTGAACGGTCAATGTCCCGCTaGTGCATGGTGAAAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVESANRQGGDLFLCPTERSMSR*CMVKTS Trigger: TGAGGTTTTCACCATGCATCAGCGGGACATTGACCG...TTCAGTTGGACACAAAAATAAATCTCCACCTTGTCTGTTTGCTGATTCCACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGAGGTGTTTTACTCAGAGGCTTCAGACCCTATTCAGCTTTAAAAACCTGGAACGCCTCTTCATCTaGATGCTAGACAGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRCFTQRLQTLFSFKNLERLFI*MLDSFS Trigger: GCTGAAACTGTCTAGCATGCAGATGAAGAGGCGTTC...CAGGTTTTTAAAGCTGAATAGGGTCTGAAGCCTCTGAGTAAAACACCTCAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGAGGTGTTTTACTCAGAGGCTTCAGACCCTATTCAGCTTTAAAAACCTGTGTATTCTAGCTCGTTaGGGTCCTCCTGCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRCFTQRLQTLFSFKNLCILAR*GPPAKQ Trigger: CTGTTTTGCAGGAGGACCCCAACGAGCTAGAATACA...CAGGTTTTTAAAGCTGAATAGGGTCTGAAGCCTCTGAGTAAAACACCTCAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| 3UTR CAA 72 bp | CATTTACAACACACATTAGCTGTAGTCACAGTACTTTaGTGGGCCAGGTCTTTGAGCAGTTTCTCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLQHTLAVVTVL*WARSLSSFSAL Trigger: CAAAGCTGAGAAACTGCTCAAAGACCTGGCCCACAAAAGTACTGTGACTACAGCTAATGTGTGTTGTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTATACCCAGCAACTGTTaGGGATGGACACTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IWFGLSTCISSGSLQVGFIPSNC*GWTLGC Trigger: ACAGCCAAGTGTCCATCCTCAACAGTTGCTGGGTAT...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTGCAAAACCCATGTCCTaGAGGGAACGGATGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IWFGLSTCISSGSLQVGFAKPMS*RERMTF Trigger: AAAGGTCATCCGTTCCCTCCAGGACATGGGTTTTGC...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTGAGAATGTTCCTCAGTaGGGGATTAGGGATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IWFGLSTCISSGSLQVGFENVPQ*GIRDLC Trigger: ACACAGATCCCTAATCCCTCACTGAGGAACATTCTC...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
||
| CDS-3UTR GCA 90 bp | ATTTGGTTTGGTTTATCTACCTGTATCTCCAGTGGATCATTACAGGTTGGTTTTGAACGCCTCTTCATCTaGATGCTAGACAGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWFGLSTCISSGSLQVGFERLFI*MLDSFS Trigger: GCTGAAACTGTCTAGCATGCAGATGAAGAGGCGTTC...AAAACCAACCTGTAATGATCCACTGGAGATACAGGTAGATAAACCAAACCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGATACATCAGGTCCATTTACAACACACATTAGCTGTAGTCACAGTACTTGACAGAGGAACAGGCTaGAATTTGTATTCTAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EMIHQVHLQHTLAVVTVLDRGTG*NLYSSS Trigger: CGAGCTAGAATACAAATTCCAGCCTGTTCCTCTGTC...AAGTACTGTGACTACAGCTAATGTGTGTTGTAAATGGACCTGATGTATCATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CAA 72 bp | GTGGAATCAGCAAACAGACAAGGTGGAGATTTATTTTaGTGTCCAACTGAAGTAATTATGAGTTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VESANRQGGDLF*CPTEVIMSCWA Trigger: AGCCCAACAACTCATAATTACTTCAGTTGGACACAAAAATAAATCTCCACCTTGTCTGTTTGCTGATTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| 3UTR CAA 72 bp | AGAATAATTAAATCCCTCAAAACAGTCAGCGTCCACTaGGGAAATGTCATAGTGGAATCAGCAAACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RIIKSLKTVSVH*GNVIVESANRQ Trigger: TTGTCTGTTTGCTGATTCCACTATGACATTTCCCAAGTGGACGCTGACTGTTTTGAGGGATTTAATTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGTCACTAAACTTTTAGGGCAACTGTCACAATTTCTAAATCTCCTATACTTGAGGATGGACACTTaGCTGTATACTAAACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVTKLLGQLSQFLNLLYLRMDT*LYTKQA Trigger: AGCTTGTTTAGTATACAGCCAAGTGTCCATCCTCAA...GTATAGGAGATTTAGAAATTGTGACAGTTGCCCTAAAAGTTTAGTGACAGATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCTAGCTGGCCCACAAGCCTCCAAGGACGCCCTGACTCTACCTCCCATCACTCTCACCTGGAATTaGTATTCTAGCTCGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLAGPQASKDALTLPPITLTWN*YSSSLG Trigger: CCCCAACGAGCTAGAATACAAATTCCAGGTGAGAGT...GATGGGAGGTAGAGTCAGGGCGTCCTTGGAGGCTTGTGGGCCAGCTAGCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTCTGACCCTCTAAGCCTGAGCTCCACCAAATCAGGCCTCTCCTCCAGCTATACCCAGCAACTGTaGAGGATGGACACTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFSDPLSLSSTKSGLSSSYTQQL*RMDTWL Trigger: CAGCCAAGTGTCCATCCTCAACAGTTGCTGGGTATA...GCTGGAGGAGAGGCCTGATTTGGTGGAGCTCAGGCTTAGAGGGTCAGAGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
||
| CDS TCA 90 bp | TGTGAATGTGGGCTTCAGCAAAACCCATGTCCTGGAGGGAACGGATaGCCTTTTCAGGCTCCAAGGACTCAGGATCCACACAAGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CECGLQQNPCPGGNG*PFQAPRTQDPHKAS Trigger: AGAAGCCTTGTGTGGATCCTGAGTCCTTGGAGCCTGAAAAGGTCATCCGTTCCCTCCAGGACATGGGTTTTGCTGAAGCCCACATTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027492.14 ENSMUST00000112942.2 ENSMUST00000112944.8 |
||
| CDS-3UTR CAA 90 bp | CACCCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCGGCACTGTAGTCAGTTaGCAAGACAAAGAAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPLDFDSRVLYLGWSRASGTVVS*QDKEGL Trigger: GAGCCCTTCTTTGTCTTGCAAACTGACTACAGTGCC...GGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
||
| CDS TCA 90 bp | AGTTTGCAAGACAAAGAAGGGCTCATCTGTTTCTGTTCTCTGAGATaGGGGGTCTGCCTAACCAAACAGGCCCAGGAGAGGGCCAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLQDKEGLICFCSLR*GVCLTKQAQERASR Trigger: TCTACTGGCCCTCTCCTGGGCCTGTTTGGTTAGGCAGACCCCTCATCTCAGAGAACAGAAACAGATGAGCCCTTCTTTGTCTTGCAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027492.14 ENSMUST00000112942.2 ENSMUST00000112944.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTAGGTGGGTTCTGGGGATCTGGACTCAGGTCCTCATACCAGCTTTGTTTGGGCACTGTAGTCAGTTaGCAAGACAAAGAAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLGGFWGSGLRSSYQLCLGTVVS*QDKEGL Trigger: GAGCCCTTCTTTGTCTTGCAAACTGACTACAGTGCC...CAAACAAAGCTGGTATGAGGACCTGAGTCCAGATCCCCAGAACCCACCTAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| CDS-3UTR CAA 90 bp | TTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCCAAAGAACCCACTATACCCAGCAACTGTaGAGGATGGACACTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FDSRVLYLGWSRASQRTHYTQQL*RMDTWL Trigger: CAGCCAAGTGTCCATCCTCAACAGTTGCTGGGTATA...GTGGGTTCTTTGGGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027492.14 ENSMUST00000112944.8 |
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| CDS-3UTR CAA 90 bp | TGGACCTGGAATGGGGCAGAGCTAAACAACAGGTTTGCTTTGGAGAGGAGAAAAAATGCTGGAAAACTCTaGAAAGCTTCCTCTACCGGG | + |
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Preference number: 5 (lower is better) Translates to: WTWNGAELNNRFALERRKNAGKL*KASSTG Trigger: CCCGGTAGAGGAAGCTTTCAAGAGTTTTCCAGCATT...TTTTCTCCTCTCCAAAGCAAACCTGTTGTTTAGCTCTGCCCCATTCCAGGTCCA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| CDS-3UTR CAA 90 bp | GGAGGAGAGTGTCGATCACAAAAAGACCACAAAATGGGAAGAGTAAGCAGCAAAGGCACTGTAGTCAGTTaGCAAGACAAAGAAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GGECRSQKDHKMGRVSSKGTVVS*QDKEGL Trigger: GAGCCCTTCTTTGTCTTGCAAACTGACTACAGTGCC...TTTGCTGCTTACTCTTCCCATTTTGTGGTCTTTTTGTGATCGACACTCTCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| CDS-3UTR CAA 90 bp | CACCCCCTGGATTTTGACAGCCGAGTCCTTTATTTAGGATGGAGTAGGGCCTCCTGTCTCTGCTTGATCTaGGTTATTGAATACTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: HPLDFDSRVLYLGWSRASCLCLI*VIEYCK Trigger: CTTACAGTATTCAATAACCAAGATCAAGCAGAGACA...GGAGGCCCTACTCCATCCTAAATAAAGGACTCGGCTGTCAAAATCCAGGGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
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| CDS-3UTR CAA 90 bp | CCATCACAGCTATGCACAAGTGCTTATGACCTATCTGTCACTAAACTTTTAGGGTATACCCAGCAACTGTaGAGGATGGACACTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PSQLCTSAYDLSVTKLLGYTQQL*RMDTWL Trigger: CAGCCAAGTGTCCATCCTCAACAGTTGCTGGGTATA...CCCTAAAAGTTTAGTGACAGATAGGTCATAAGCACTTGTGCATAGCTGTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112942.2 |
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| CDS-3UTR CAA 90 bp | TACATTCAGGGAGGAGAGTGTCGATCACAAAAAGACCACAAAATGGGAAGAGTAGGAACAGGCTGGAATTaGTATTCTAGCTCGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: YIQGGECRSQKDHKMGRVGTGWN*YSSSLG Trigger: CCCCAACGAGCTAGAATACAAATTCCAGCCTGTTCC...TACTCTTCCCATTTTGTGGTCTTTTTGTGATCGACACTCTCCTCCCTGAATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| CDS-3UTR CAA 90 bp | ATCAAAATACCAGTGTTGGGATCAAAAGTGCTTGAGAAGATCCAGGTGAAGGTCAATGCTGGAAAACTCTaGAAAGCTTCCTCTACCGGG | + |
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Preference number: 5 (lower is better) Translates to: IKIPVLGSKVLEKIQVKVNAGKL*KASSTG Trigger: CCCGGTAGAGGAAGCTTTCAAGAGTTTTCCAGCATT...GACCTTCACCTGGATCTTCTCAAGCACTTTTGATCCCAACACTGGTATTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
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| CDS-3UTR CAA 90 bp | ATCAAAATACCAGTGTTGGGATCAAAAGTGCTTGAGAAGATCCAGGTGAAGGTCTATGCATACTGGAATTaGTATTCTAGCTCGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: IKIPVLGSKVLEKIQVKVYAYWN*YSSSLG Trigger: CCCCAACGAGCTAGAATACAAATTCCAGTATGCATA...GACCTTCACCTGGATCTTCTCAAGCACTTTTGATCCCAACACTGGTATTTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
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| CDS TCA 72 bp | GGGCTTCAGCAAAACCCATGTCCTGGAGGGAACGGATaGCCTTTTCAGGCTCCAAGGACTCAGGATCCACAC | + |
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Preference number: 6 (lower is better) Translates to: GLQQNPCPGGNG*PFQAPRTQDPH Trigger: GTGTGGATCCTGAGTCCTTGGAGCCTGAAAAGGTCATCCGTTCCCTCCAGGACATGGGTTTTGCTGAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027492.14 ENSMUST00000112942.2 ENSMUST00000112944.8 |
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| CDS TCA 72 bp | CCTTCACAACTCGGTCAATGTCCCGCTGATGCATGGTaGAAACCTCAGGGCAAACGGACAGCACCCGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSQLGQCPADAW*KPQGKRTAPAS Trigger: TGAAGCGGGTGCTGTCCGTTTGCCCTGAGGTTTTCACCATGCATCAGCGGGACATTGACCGAGTTGTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027492.14 ENSMUST00000112942.2 ENSMUST00000112944.8 |
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| CDS TCA 72 bp | TCCCTGAGGACCTTCACAACTCGGTCAATGTCCCGCTaGTGCATGGTGAAAACCTCAGGGCAAACGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SLRTFTTRSMSR*CMVKTSGQTDS Trigger: GCTGTCCGTTTGCCCTGAGGTTTTCACCATGCATCAGCGGGACATTGACCGAGTTGTGAAGGTCCTCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027492.14 ENSMUST00000112942.2 ENSMUST00000112944.8 |
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| CDS CAA 72 bp | AACTTGAAACTCCTCGACAGAGGAACAGGCTGGAATTaGTATTCTAGCTCGTTGGGGTCCTCCTGCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: NLKLLDRGTGWN*YSSSLGSSCKT Trigger: TGTTTTGCAGGAGGACCCCAACGAGCTAGAATACAAATTCCAGCCTGTTCCTCTGTCGAGGAGTTTCAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112944.8 |
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| CDS TCA 72 bp | AAACTCAGCTTCAGAAACTCTGAGAATGTTCCTCAGTaGGGGATTAGGGATCTGTGTCTGCCCCTTCTTATC | + |
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Preference number: 6 (lower is better) Translates to: KLSFRNSENVPQ*GIRDLCLPLLI Trigger: GATAAGAAGGGGCAGACACAGATCCCTAATCCCTCACTGAGGAACATTCTCAGAGTTTCTGAAGCTGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027492.14 |
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