Pregenerated sensors for MTERF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021519Ensembl transcript IDs: ENSMUST00000021991.11, ENSMUST00000172597.8, ENSMUST00000173158.8, ENSMUST00000173407.8, ENSMUST00000173773.2, ENSMUST00000173891.8, ENSMUST00000173910.2, ENSMUST00000174339.2, ENSMUST00000224085.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCAGGAAAAGATACGAACTTGTCCAAAGAAACATAGTTAGGTTTTaGTGGGTCATACTGTGCTCTTCCCAGGTAGGCAAGAAACAAGTG | + |
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Preference number: 1 (lower is better) Translates to: IRKRYELVQRNIVRF*WVILCSSQVGKKQV Trigger: CACTTGTTTCTTGCCTACCTGGGAAGAGCACAGTATGACCCAGCAAAACCTAACTATGTTTCTTTGGACAAGTTCGTATCTTTTCCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173158.8 |
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| 3UTR CCA 90 bp | AGGAAAAGATACGAACTTGTCCAAAGAAACATAGTTAGGTTTTGCTaGGTCATACTGTGCTCTTCCCAGGTAGGCAAGAAACAAGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: RKRYELVQRNIVRFC*VILCSSQVGKKQVS Trigger: AGACACTTGTTTCTTGCCTACCTGGGAAGAGCACAGTATGACCCAGCAAAACCTAACTATGTTTCTTTGGACAAGTTCGTATCTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173158.8 |
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| 3UTR TCA 90 bp | ACAACCAGATCTCTAGTCTTCTTCACATTCAGTTCAAGTTCTTTCTaGAAAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: TTRSLVFFTFSSSSF*KNPSLLSSLSTEKL Trigger: GAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTTTTCAGAAAGAACTTGAACTGAATGTGAAGAAGACTAGAGATCTGGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| 3UTR GCA 90 bp | GAACTTGTCCAAAGAAACATAGTTAGGTTTTGCTGGGTCATACTGTaGTCTTCCCAGGTAGGCAAGAAACAAGTGTCTTTCTTTAATTTT | + |
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Preference number: 1 (lower is better) Translates to: ELVQRNIVRFCWVIL*SSQVGKKQVSFFNF Trigger: AAAATTAAAGAAAGACACTTGTTTCTTGCCTACCTGGGAAGAGCACAGTATGACCCAGCAAAACCTAACTATGTTTCTTTGGACAAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173158.8 |
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| 3UTR-3UTR CCA 90 bp | AGACTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTAGTCTTCTTCGCCTTAGAAGGAGGTTaGCTGCATCTGGATGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: RLPVSSLGRRTTRSLVFFALEGG*LHLDVF Trigger: AAAAACATCCAGATGCAGCCAACCTCCTTCTAAGGC...GAAGAAGACTAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173158.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGTCCCAGCTGGTTATCTTCTAAACCCAAATCTTTAAGAAATAGCAGTGCCTTAGAAGGAGGTTaGCTGCATCTGGATGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: RNGPSWLSSKPKSLRNSSALEGG*LHLDVF Trigger: AAAAACATCCAGATGCAGCCAACCTCCTTCTAAGGC...ACTGCTATTTCTTAAAGATTTGGGTTTAGAAGATAACCAGCTGGGACCATTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000173910.2 |
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| 3UTR-3UTR CAA 90 bp | AAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGAGCCTTAGAAGGAGGTaGGCTGCATCTGGATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: KIPVCYLVFPRRSSTEMVSLRRR*AASGCF Trigger: AAAACATCCAGATGCAGCCAACCTCCTTCTAAGGCT...CACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 |
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| 3UTR-3UTR CAA 90 bp | AAAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTAGCCTTAGAAGGAGGTaGGCTGCATCTGGATGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KNPSLLSSLSTEKLNRNGSLRRR*AASGCF Trigger: AAAACATCCAGATGCAGCCAACCTCCTTCTAAGGCT...ACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 |
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| CDS-3UTR TCA 90 bp | ACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTACGTAATCTGCAAGTGTaGAGGAGGAGATGGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TGSRLPVSSLGRRTTRSLRNLQV*RRRWAA Trigger: CGCTGCCCATCTCCTCCTTCACACTTGCAGATTACG...TAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR GCA 90 bp | ACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTAGGCTTTTCCTGCTCTTaGAGAGCGTTTGGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGSRLPVSSLGRRTTRSLGFSCS*RAFGDL Trigger: CAAGTCACCAAACGCTCTGCAAGAGCAGGAAAAGCC...TAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGACTGAAGGAAGCAGAGTaGTTTCGGCAGAACTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SFTGSRLPVSSLGRRTTRLKEAE*FRQNSL Trigger: CAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAG...TCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGAGCTTCTGCAGAGTCTTaGAATGGTCTACGTAATCTG | + |
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Preference number: 4 (lower is better) Translates to: SFTGSRLPVSSLGRRTTRASAES*NGLRNL Trigger: CAGATTACGTAGACCATTCCAAGACTCTGCAGAAGC...TCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGTGAAGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR GCA 90 bp | CCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTAGTCTTCTTCACATTCGGCTTTTCCTGCTCTTaGAGAGCGTTTGGTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: PVSSLGRRTTRSLVFFTFGFSCS*RAFGDL Trigger: CAAGTCACCAAACGCTCTGCAAGAGCAGGAAAAGCC...GAATGTGAAGAAGACTAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR TCA 90 bp | ACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTATTCAAGAGGCAGCTCTaGTTCAAGACTAAGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: TGSRLPVSSLGRRTTRSLFKRQL*FKTKYP Trigger: AGGATACTTAGTCTTGAATCAGAGCTGCCTCTTGAA...TAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR TCA 90 bp | AAAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTCGTAATCTGCAAGTGTaGAGGAGGAGATGGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KNPSLLSSLSTEKLNRNGRNLQV*RRRWAA Trigger: CGCTGCCCATCTCCTCCTTCACACTTGCAGATTACG...ACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CCA 90 bp | ACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTATTTGTGCTGGCAGAATaGAAACGATTCCAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: TGSRLPVSSLGRRTTRSLFVLAE*KRFQNK Trigger: TTTGTTCTGGAATCGTTTCCATTCTGCCAGCACAAA...TAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR CCA 90 bp | CTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTAGTCTTCTTCACAGCTTCTGCAGAGTCTTaGAATGGTCTACGTAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVSSLGRRTTRSLVFFTASAES*NGLRNL Trigger: CAGATTACGTAGACCATTCCAAGACTCTGCAGAAGC...TGTGAAGAAGACTAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR GCA 90 bp | AAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGCTGAAGGAAGCAGAGTaGTTTCGGCAGAACTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KIPVCYLVFPRRSSTEMVLKEAE*FRQNSL Trigger: CAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAG...CACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR GCA 90 bp | AAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGCTAAGTATCCTCTCCTaGTGTTCAGCCACTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KIPVCYLVFPRRSSTEMVLSILS*CSATEG Trigger: TCCTTCAGTGGCTGAACAGCAGGAGAGGATACTTAG...CACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CCA 90 bp | CCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGCATTTGCTTCTGCAGAGTCTTaGAATGGTCTACGTAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSSLSTEKLNRNGAFASAES*NGLRNL Trigger: CAGATTACGTAGACCATTCCAAGACTCTGCAGAAGC...AAATGCACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR GCA 90 bp | AGAAATGGTCCCAGCTGGTTATCTTCTAAACCCAAATCTTTAAGAAATAGCAGTGGCTTTTCCTGCTCTTaGAGAGCGTTTGGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNGPSWLSSKPKSLRNSSGFSCS*RAFGDL Trigger: CAAGTCACCAAACGCTCTGCAAGAGCAGGAAAAGCC...ACTGCTATTTCTTAAAGATTTGGGTTTAGAAGATAACCAGCTGGGACCATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 |
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| CDS-3UTR GCA 90 bp | CCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGCATTTTCTTTGTCCTATTTGTaGTGGCAGAATGGAAACGAT | + |
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Preference number: 4 (lower is better) Translates to: PSLLSSLSTEKLNRNGAFSLSYL*WQNGND Trigger: ATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGA...AAATGCACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR TCA 90 bp | ACCCAGGACAGCATAGAACTGTCTCATTATGAATCCAAAATGTTATGTAATGATATGCAGTGGCCACCATaGAGTCTGTGGAAACTTGAC | + |
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Preference number: 4 (lower is better) Translates to: TQDSIELSHYESKMLCNDMQWPP*SLWKLD Trigger: GTCAAGTTTCCACAGACTTCATGGTGGCCACTGCAT...ATCATTACATAACATTTTGGATTCATAATGAGACAGTTCTATGCTGTCCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173891.8 |
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| CDS-3UTR GCA 90 bp | CAGAAATGGTGCATTTTTGACCATCCGTGCAATGTCTGTCTTACTGAAATTTTTCTGAAGGAAGCAGAGTaGTTTCGGCAGAACTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QKWCIFDHPCNVCLTEIFLKEAE*FRQNSL Trigger: CAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAG...AAAAATTTCAGTAAGACAGACATTGCACGGATGGTCAAAAATGCACCATTTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR GCA 90 bp | TTAAATAACTGTGGAAACTTGACGATGATGTGGTGGGGAATATTCATCACATTGCTAAGTATCCTCTCCTaGTGTTCAGCCACTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LNNCGNLTMMWWGIFITLLSILS*CSATEG Trigger: TCCTTCAGTGGCTGAACAGCAGGAGAGGATACTTAG...CAATGTGATGAATATTCCCCACCACATCATCGTCAAGTTTCCACAGTTATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173158.8 |
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| CDS-3UTR CCA 90 bp | AAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGTTTGTGCTGGCAGAATaGAAACGATTCCAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: KIPVCYLVFPRRSSTEMVFVLAE*KRFQNK Trigger: TTTGTTCTGGAATCGTTTCCATTCTGCCAGCACAAA...CACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CCA 90 bp | TTAAAGCTCAATAGTGGTCTTACCATGCTGTCTTTCAGACTTAAGCTGAGACCCTTGACGATGATGTGGTaGGGAATATTCATCACATTG | + |
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Preference number: 4 (lower is better) Translates to: LKLNSGLTMLSFRLKLRPLTMMW*GIFITL Trigger: CAATGTGATGAATATTCCCCACCACATCATCGTCAA...GGGTCTCAGCTTAAGTCTGAAAGACAGCATGGTAAGACCACTATTGAGCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173891.8 |
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| CDS-3UTR TCA 90 bp | GCGAACAACCAGATCTCTAGTCTTCTTCACATTCAGTTCAAGTTCTTTCTGAAATTCAAGAGGCAGCTCTaGTTCAAGACTAAGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: ANNQISSLLHIQFKFFLKFKRQL*FKTKYP Trigger: AGGATACTTAGTCTTGAATCAGAGCTGCCTCTTGAA...TTTCAGAAAGAACTTGAACTGAATGTGAAGAAGACTAGAGATCTGGTTGTTCGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR TCA 90 bp | CAACAGAAATGGTGCATTTTTGACCATCCGTGCAATGTCTGTCTTACTGAAATTTTCAAGAGGCAGCTCTaGTTCAAGACTAAGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: QQKWCIFDHPCNVCLTEIFKRQL*FKTKYP Trigger: AGGATACTTAGTCTTGAATCAGAGCTGCCTCTTGAA...AATTTCAGTAAGACAGACATTGCACGGATGGTCAAAAATGCACCATTTCTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR TCA 90 bp | CAGTGTACTTTATTAAAGCTCAATAGTGGTCTTACCATGCTGTCTTTCAGACTTCTTTTCTTCTGTTTCTaGTGCAGCTCTCGGACTATA | + |
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Preference number: 4 (lower is better) Translates to: QCTLLKLNSGLTMLSFRLLFFCF*CSSRTI Trigger: TATAGTCCGAGAGCTGCATCAGAAACAGAAGAAAAG...AAGTCTGAAAGACAGCATGGTAAGACCACTATTGAGCTTTAATAAAGTACACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173891.8 |
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| CDS-3UTR GCA 90 bp | CAGAAATGGTGCATTTTTGACCATCCGTGCAATGTCTGTCTTACTGAAATTTTTTCTTTGTCCTATTTGTaGTGGCAGAATGGAAACGAT | + |
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Preference number: 4 (lower is better) Translates to: QKWCIFDHPCNVCLTEIFSLSYL*WQNGND Trigger: ATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGA...AAAAATTTCAGTAAGACAGACATTGCACGGATGGTCAAAAATGCACCATTTCTG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGGACAGCATAGAACTGTCTCATTATGAATCCAAAATGTTATGTAATGATAACTTGACGATGATGTaGTGGGGAATATTCATCACA | + |
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Preference number: 4 (lower is better) Translates to: TQDSIELSHYESKMLCNDNLTMM*WGIFIT Trigger: TGTGATGAATATTCCCCACCACATCATCGTCAAGTT...ATCATTACATAACATTTTGGATTCATAATGAGACAGTTCTATGCTGTCCTGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173891.8 |
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| CDS TCA 90 bp | TTAATTCCCCGCCGGAGAAAGCTCGTGTCAGAGGAGAGCAGAGGCTaGGCTGAGAAGCCGGGCAACACGGCTTTTCCTGCTCTTGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LIPRRRKLVSEESRG*AEKPGNTAFPALAE Trigger: CTCTGCAAGAGCAGGAAAAGCCGTGTTGCCCGGCTTCTCAGCTCAGCCTCTGCTCTCCTCTGACACGAGCTTTCTCCGGCGGGGAATTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000173773.2 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS TCA 90 bp | GCAAGTGTGAAGGAGGAGATGGGCAGCGGAGAGTACGCAGCAATCTaGATAGCCTCCTCCTCTGAAACTGACTGTAACGGAGACAATGGA | + |
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Preference number: 5 (lower is better) Translates to: ASVKEEMGSGEYAAI*IASSSETDCNGDNG Trigger: TCCATTGTCTCCGTTACAGTCAGTTTCAGAGGAGGAGGCTATTCAGATTGCTGCGTACTCTCCGCTGCCCATCTCCTCCTTCACACTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173910.2 ENSMUST00000224085.2 |
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| CDS GCA 90 bp | CTGACTTCAAGAGGCAGCTCTGATTCAAGACTAAGTATCCTCTCCTaGTGTTCAGCCACTGAAGGAAGCAGAGTGCTTTCGGCAGAACTC | + |
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Preference number: 5 (lower is better) Translates to: LTSRGSSDSRLSILS*CSATEGSRVLSAEL Trigger: GAGTTCTGCCGAAAGCACTCTGCTTCCTTCAGTGGCTGAACAGCAGGAGAGGATACTTAGTCTTGAATCAGAGCTGCCTCTTGAAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 |
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| CDS GCA 90 bp | ACTTCTTCAAGAGGCAGCTCTGATTCAAGACTAAGTATCCTCTCCTaGTGTTCAGCCACTGAAGGAAGCAGAGTGCTTTCGGCAGAACTC | + |
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Preference number: 5 (lower is better) Translates to: TSSRGSSDSRLSILS*CSATEGSRVLSAEL Trigger: GAGTTCTGCCGAAAGCACTCTGCTTCCTTCAGTGGCTGAACAGCAGGAGAGGATACTTAGTCTTGAATCAGAGCTGCCTCTTGAAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | TTCATGTTTTCCTTCACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGATTTCGGCAGAACTCTTaGTCCTATTTGTGCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FMFSFTGSRLPVSSLGRRFRQNS*SYLCWQ Trigger: CTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAA...TCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGTGAAGGAAAACATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173158.8 |
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| CDS TCA 90 bp | TCAGAAGTTCTAGTTCCGTTGCCTTCTTCCCTTTTCTTCTGTTTCTaGTGCAGCTCTCGGACTATATGCAGTGGCCACCATGAAGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SEVLVPLPSSLFFCF*CSSRTICSGHHEVC Trigger: ACAGACTTCATGGTGGCCACTGCATATAGTCCGAGAGCTGCATCAGAAACAGAAGAAAAGGGAAGAAGGCAACGGAACTAGAACTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173891.8 |
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| CDS GCA 90 bp | CTGAAGGAAGCAGAGTGCTTTCGGCAGAACTCTTTGTCCTATTTGTaGTGGCAGAATGGAAACGATTCCAGAACAAAGTCCTGTAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LKEAECFRQNSLSYL*WQNGNDSRTKSCKS Trigger: AGACTTACAGGACTTTGTTCTGGAATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | TTCATGTTTTCCTTCACAGGCTCCAGACTTCCTGTTAGTAGCCTTGGAAGGCGACGTTTGGTGACTTGTTaGGCTTTAATGAAGCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: FMFSFTGSRLPVSSLGRRRLVTC*ALMKLV Trigger: GACTAGCTTCATTAAAGCCAAACAAGTCACCAAACG...TCGCCTTCCAAGGCTACTAACAGGAAGTCTGGAGCCTGTGAAGGAAAACATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173158.8 |
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| CDS-3UTR CAA 90 bp | CCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTAGTCTTCTTCACATTCAGAGCGTTTGGTGACTaGTTTGGCTTTAATGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PVSSLGRRTTRSLVFFTFRAFGD*FGFNEA Trigger: AGCTTCATTAAAGCCAAACAAGTCACCAAACGCTCT...GAATGTGAAGAAGACTAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTGTTAGTAGCCTTGGAAGGCGAACAACCAGATCTCTAGTCTTCTTCACAAACTCTTTGTCCTATTaGTGCTGGCAGAATGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LPVSSLGRRTTRSLVFFTNSLSY*CWQNGN Trigger: GTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTT...TGTGAAGAAGACTAGAGATCTGGTTGTTCGCCTTCCAAGGCTACTAACAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | AAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGGTCAACTTAACTGAGTaGAACCGTCTGGGTAACTGT | + |
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Preference number: 5 (lower is better) Translates to: KIPVCYLVFPRRSSTEMVVNLTE*NRLGNC Trigger: ACAGTTACCCAGACGGTTCAACTCAGTTAAGTTGAC...CACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | ATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGCATAGAGCGTTTGGTGACTaGTTTGGCTTTAATGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: IPVCYLVFPRRSSTEMVHRAFGD*FGFNEA Trigger: AGCTTCATTAAAGCCAAACAAGTCACCAAACGCTCT...ATGCACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGCATTTAGAGCGTTTGGTGACTaGTTTGGCTTTAATGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PSLLSSLSTEKLNRNGAFRAFGD*FGFNEA Trigger: AGCTTCATTAAAGCCAAACAAGTCACCAAACGCTCT...AAATGCACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | AAAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTTTTCGGCAGAACTCTTaGTCCTATTTGTGCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: KNPSLLSSLSTEKLNRNGFRQNS*SYLCWQ Trigger: CTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAA...ACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | AAAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGTCAACTTAACTGAGTaGAACCGTCTGGGTAACTGT | + |
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Preference number: 5 (lower is better) Translates to: KNPSLLSSLSTEKLNRNGVNLTE*NRLGNC Trigger: ACAGTTACCCAGACGGTTCAACTCAGTTAAGTTGAC...ACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | AAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGCGTTTGGTGACTTGTTaGGCTTTAATGAAGCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: KIPVCYLVFPRRSSTEMVRLVTC*ALMKLV Trigger: GACTAGCTTCATTAAAGCCAAACAAGTCACCAAACG...CACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | AAAATCCCAGTCTGTTATCTAGTCTTTCCACGGAGAAGCTCAACAGAAATGGTGAACTCTTTGTCCTATTaGTGCTGGCAGAATGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: KIPVCYLVFPRRSSTEMVNSLSY*CWQNGN Trigger: GTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTT...CACCATTTCTGTTGAGCTTCTCCGTGGAAAGACTAGATAACAGACTGGGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | ACTTTATTAAAGCTCAATAGTGGTCTTACCATGCTGTCTTTCAGACTTAAGCTGGAAGTCTGTGGAAACTaGACGATGATGTGGTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: TLLKLNSGLTMLSFRLKLEVCGN*TMMWWG Trigger: TCCCCACCACATCATCGTCAAGTTTCCACAGACTTC...CAGCTTAAGTCTGAAAGACAGCATGGTAAGACCACTATTGAGCTTTAATAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173891.8 |
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| CDS-3UTR CAA 90 bp | CAGAAATGGTGCATTTTTGACCATCCGTGCAATGTCTGTCTTACTGAAATTTTTTTTCGGCAGAACTCTTaGTCCTATTTGTGCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QKWCIFDHPCNVCLTEIFFRQNS*SYLCWQ Trigger: CTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAA...AAAAATTTCAGTAAGACAGACATTGCACGGATGGTCAAAAATGCACCATTTCTG 41% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | CAGAAATGGTGCATTTTTGACCATCCGTGCAATGTCTGTCTTACTGAAATTTTTGTCAACTTAACTGAGTaGAACCGTCTGGGTAACTGT | + |
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Preference number: 5 (lower is better) Translates to: QKWCIFDHPCNVCLTEIFVNLTE*NRLGNC Trigger: ACAGTTACCCAGACGGTTCAACTCAGTTAAGTTGAC...AAAAATTTCAGTAAGACAGACATTGCACGGATGGTCAAAAATGCACCATTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS-3UTR CAA 90 bp | CAACAGAAATGGTGCATTTTTGACCATCCGTGCAATGTCTGTCTTACTGAAATTAACTCTTTGTCCTATTaGTGCTGGCAGAATGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: QQKWCIFDHPCNVCLTEINSLSY*CWQNGN Trigger: GTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTT...AATTTCAGTAAGACAGACATTGCACGGATGGTCAAAAATGCACCATTTCTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000224085.2 |
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| CDS TCA 72 bp | AAGGAGGAGATGGGCAGCGGAGAGTACGCAGCAATCTaGATAGCCTCCTCCTCTGAAACTGACTGTAACGGA | + |
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Preference number: 6 (lower is better) Translates to: KEEMGSGEYAAI*IASSSETDCNG Trigger: TCCGTTACAGTCAGTTTCAGAGGAGGAGGCTATTCAGATTGCTGCGTACTCTCCGCTGCCCATCTCCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173910.2 ENSMUST00000224085.2 |
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| CDS TCA 72 bp | AAGGAGGAGATGGGCAGCGGAGAGTACGCAGCAATCTaGATAGCCTCCTCCTCTGAAACTGACTTCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KEEMGSGEYAAI*IASSSETDFKR Trigger: CCTCTTGAAGTCAGTTTCAGAGGAGGAGGCTATTCAGATTGCTGCGTACTCTCCGCTGCCCATCTCCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 |
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| CDS TCA 72 bp | AACGGAGACAATGGAGGCAGGTCATCCACTTTGAGTTaGACCGTCTGGGTAACTGTTGGGCTAACAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: NGDNGGRSSTLS*TVWVTVGLTEP Trigger: TGGCTCTGTTAGCCCAACAGTTACCCAGACGGTTCAACTCAAAGTGGATGACCTGCCTCCATTGTCTCCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173910.2 |
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| CDS GCA 72 bp | TCCTCTCCTGCTGTTCAGCCACTGAAGGAAGCAGAGTaGTTTCGGCAGAACTCTTTGTCCTATTTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSPAVQPLKEAE*FRQNSLSYLCW Trigger: CCAGCACAAATAGGACAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAGTGGCTGAACAGCAGGAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS TCA 72 bp | TGGAGGCAGGTCATCCACTTCTTCAAGAGGCAGCTCTaGTTCAAGACTAAGTATCCTCTCCTGCTGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: WRQVIHFFKRQL*FKTKYPLLLFS Trigger: GCTGAACAGCAGGAGAGGATACTTAGTCTTGAATCAGAGCTGCCTCTTGAAGAAGTGGATGACCTGCCTCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS TCA 72 bp | GCCTCCTCCTCTGAAACTGACTTCAAGAGGCAGCTCTaGTTCAAGACTAAGTATCCTCTCCTGCTGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASSSETDFKRQL*FKTKYPLLLFS Trigger: GCTGAACAGCAGGAGAGGATACTTAGTCTTGAATCAGAGCTGCCTCTTGAAGTCAGTTTCAGAGGAGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173158.8 ENSMUST00000173407.8 |
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| CDS GCA 72 bp | AGAGGCAGCTCTGATTCAAGACTAAGTATCCTCTCCTaGTGTTCAGCCACTGAAGGAAGCAGAGTGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: RGSSDSRLSILS*CSATEGSRVLS Trigger: CGAAAGCACTCTGCTTCCTTCAGTGGCTGAACAGCAGGAGAGGATACTTAGTCTTGAATCAGAGCTGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS CAA 90 bp | GCTGAGAAGCCGGGCAACACGGCTTTTCCTGCTCTTGCAGAGCGTTaGGTGACTTGTTTGGCTTTAATGAAGCTAGTCAACTTAACTGAG | + |
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Preference number: 6 (lower is better) Translates to: AEKPGNTAFPALAER*VTCLALMKLVNLTE Trigger: CTCAGTTAAGTTGACTAGCTTCATTAAAGCCAAACAAGTCACCAAACGCTCTGCAAGAGCAGGAAAAGCCGTGTTGCCCGGCTTCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000173773.2 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS CAA 72 bp | CCACTGAAGGAAGCAGAGTGCTTTCGGCAGAACTCTTaGTCCTATTTGTGCTGGCAGAATGGAAACGATTCC | + |
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Preference number: 6 (lower is better) Translates to: PLKEAECFRQNS*SYLCWQNGNDS Trigger: GGAATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS CAA 90 bp | GCTGTTCAGCCACTGAAGGAAGCAGAGTGCTTTCGGCAGAACTCTTaGTCCTATTTGTGCTGGCAGAATGGAAACGATTCCAGAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: AVQPLKEAECFRQNS*SYLCWQNGNDSRTK Trigger: CTTTGTTCTGGAATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAGTGGCTGAACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS CAA 90 bp | CCACTGAAGGAAGCAGAGTGCTTTCGGCAGAACTCTTTGTCCTATTaGTGCTGGCAGAATGGAAACGATTCCAGAACAAAGTCCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: PLKEAECFRQNSLSY*CWQNGNDSRTKSCK Trigger: CTTACAGGACTTTGTTCTGGAATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS TCA 72 bp | TTCAAGACTAAGTATCCTCTCCTGCTGTTCAGCCACTaGAGGAAGCAGAGTGCTTTCGGCAGAACTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: FKTKYPLLLFSH*RKQSAFGRTLC Trigger: ACAAAGAGTTCTGCCGAAAGCACTCTGCTTCCTTCAGTGGCTGAACAGCAGGAGAGGATACTTAGTCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS GCA 72 bp | GCAGAGTGCTTTCGGCAGAACTCTTTGTCCTATTTGTaGTGGCAGAATGGAAACGATTCCAGAACAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: AECFRQNSLSYL*WQNGNDSRTKS Trigger: GGACTTTGTTCTGGAATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAAGCACTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS CCA 72 bp | GAGTGCTTTCGGCAGAACTCTTTGTCCTATTTGTGCTaGCAGAATGGAAACGATTCCAGAACAAAGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ECFRQNSLSYLC*QNGNDSRTKSC Trigger: ACAGGACTTTGTTCTGGAATCGTTTCCATTCTGCCAGCACAAATAGGACAAAGAGTTCTGCCGAAAGCACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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| CDS GCA 72 bp | GGATGTTTTTCTATCTTAGACAAATCCACTCCAAGCTaGACTAGCTTCTGCAGAGTCTTGGAATGGTCTACG | + |
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Preference number: 6 (lower is better) Translates to: GCFSILDKSTPS*TSFCRVLEWST Trigger: CGTAGACCATTCCAAGACTCTGCAGAAGCTAGTGCAGCTTGGAGTGGATTTGTCTAAGATAGAAAAACATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 |
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| CDS CAA 72 bp | TGTTTGGCTTTAATGAAGCTAGTCAACTTAACTGAGTaGAACCGTCTGGGTAACTGTTGGGCTAACAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: CLALMKLVNLTE*NRLGNCWANRA Trigger: GGCTCTGTTAGCCCAACAGTTACCCAGACGGTTCAACTCAGTTAAGTTGACTAGCTTCATTAAAGCCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000021991.11 ENSMUST00000172597.8 ENSMUST00000173158.8 ENSMUST00000173407.8 ENSMUST00000173773.2 ENSMUST00000174339.2 ENSMUST00000224085.2 |
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