Pregenerated sensors for MTERF1A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040429

Ensembl transcript IDs: ENSMUST00000044746.5, ENSMUST00000117463.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTTCATATCTTCTCTGACTCCAGGACAGCAGAGCAATGCTGGATGTaGTCAAGTCATACCCAGCATGGGACAGCTCTCGGATGCGAGTTT	+
Preference number: 5 (lower is better) Translates to: LHIFSDSRTAEQCWM*SSHTQHGTALGCEF Trigger: AAACTCGCATCCGAGAGCTGTCCCATGCTGGGTATGACTTGAGCACATCCAGCATTGCTCTGCTGTCCTGGAGTCAGAGAAGATATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044746.5 ENSMUST00000117463.2
CDS CCA 90 bp	CAGGACAGCAGAGCAATGCTGGATGTGCTCAAGTCATACCCAGCATaGGACAGCTCTCGGATGCGAGTTTTTAAAGTATTTATGCTGGAG	+
Preference number: 5 (lower is better) Translates to: QDSRAMLDVLKSYPA*DSSRMRVFKVFMLE Trigger: CTCCAGCATAAATACTTTAAAAACTCGCATCCGAGAGCTGTCCCATGCTGGGTATGACTTGAGCACATCCAGCATTGCTCTGCTGTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044746.5 ENSMUST00000117463.2
CDS CCA 72 bp	CATATCTTCTCTGACTCCAGGACAGCAGAGCAATGCTaGATGTGCTCAAGTCATACCCAGCATGGGACAGCT	+
Preference number: 6 (lower is better) Translates to: HIFSDSRTAEQC*MCSSHTQHGTA Trigger: AGCTGTCCCATGCTGGGTATGACTTGAGCACATCCAGCATTGCTCTGCTGTCCTGGAGTCAGAGAAGATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044746.5 ENSMUST00000117463.2

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