RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTCL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052105

Ensembl transcript IDs: ENSMUST00000086693.12, ENSMUST00000097291.10, ENSMUST00000145347.8, ENSMUST00000177034.2

Found 704 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGGTCAGGCTGGGCAGATGGGTCACGCAGAGTCTTAAGTCTATCTaGAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTC +
Preference number: 1 (lower is better)
Translates to: AVRLGRWVTQSLKSI*RAPYLFSKVGLHPF
Trigger: GAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCTGCGTGACCCATCTGCCCAGCCTGACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR TCA 90 bp AGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATaGCAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAA +
Preference number: 1 (lower is better)
Translates to: RAPYLFSKVGLHPFR*QTLSSSGLTALSLQ
Trigger: TTGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR GCA 90 bp TTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTaGATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGG +
Preference number: 1 (lower is better)
Translates to: LSLSEGLRTFSARLA*ILSDDRHSRLLASR
Trigger: CCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTaGAAATTCAACAGGCAGGCAGAACTGAGAACAAGGGTGCTCGGA +
Preference number: 1 (lower is better)
Translates to: NTPNSTWRNPTRTEQ*KFNRQAELRTRVLG
Trigger: TCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR TCA 90 bp ACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCAGGCAGAACTaGGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTAAAA +
Preference number: 1 (lower is better)
Translates to: TQPERNSANSTGRQN*EQGCSESLQMYILK
Trigger: TTTTAAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR GCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTGGAAGGCGGCGGTTTaGTGGTCTCTCTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCWKAAV*WSLWPG
Trigger: TCCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
3UTR-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGGCAGTGGGGGAAGGTaGGGCCCAACGGGATGGAAG +
Preference number: 2 (lower is better)
Translates to: RVLSLSEGLRTFSARLACGSGGR*GPTGWK
Trigger: CTTCCATCCCGTTGGGCCCCACCTTCCCCCACTGCC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
3UTR-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGGCAGTGGGGGAAGGTaGGGCCCAACGGGATGGAAG +
Preference number: 2 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGGSGGR*GPTGWK
Trigger: CTTCCATCCCGTTGGGCCCCACCTTCCCCCACTGCC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
3UTR-3UTR TCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCACAGGCAGGCAGAACTaGGAACAAGGGTGCTCGGAA +
Preference number: 2 (lower is better)
Translates to: PASFQMTDTLVFWPHGLITGRQN*EQGCSE
Trigger: TTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCTGT...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTGGAAGGCGGCGGTTTaGTGGTCTCTCTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMWKAAV*WSLWPG
Trigger: TCCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
3UTR-3UTR CCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACTGGCTTCTCCTCTGGTaGGTCCTCCTCACCGTGTTC +
Preference number: 2 (lower is better)
Translates to: SEGLRTFSARLACILSDDWLLLW*VLLTVF
Trigger: GAACACGGTGAGGAGGACCCACCAGAGGAGAAGCCA...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
3UTR-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCTGGTCTCTCTGGCCTaGAAAAGCAGGGCTCTAGGG +
Preference number: 2 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRLVSLA*KSRALG
Trigger: CCCTAGAGCCCTGCTTTTCCAGGCCAGAGAGACCAG...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
3UTR-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCTGGTCTCTCTGGCCTaGAAAAGCAGGGCTCTAGGG +
Preference number: 2 (lower is better)
Translates to: FPLGWRLADGGDGLVMQILVSLA*KSRALG
Trigger: CCCTAGAGCCCTGCTTTTCCAGGCCAGAGAGACCAG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
3UTR-3UTR TCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCTCAGTTTACCAGGTTaGACATTCAGTAGCCGTGTG +
Preference number: 2 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQLSLPG*TFSSRV
Trigger: CACACGGCTACTGAATGTTCAACCTGGTAAACTGAG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCTCTACATCTTTCCTTTaGGATGGAGGTTGGCTGATG +
Preference number: 2 (lower is better)
Translates to: PASFQMTDTLVFWPHGLISTSFL*DGGWLM
Trigger: CATCAGCCAACCTCCATCCCAAAGGAAAGATGTAGA...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR CCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTATCCTGTCACAGGTGTaGCTTCTCCTCTGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: RQAELRTRVLGISSNVHFILSQV*LLLWWV
Trigger: GACCCACCAGAGGAGAAGCCACACCTGTGACAGGAT...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
3UTR-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATCTACATCTTTCCTTTaGGATGGAGGTTGGCTGATG +
Preference number: 2 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITSTSFL*DGGWLM
Trigger: CATCAGCCAACCTCCATCCCAAAGGAAAGATGTAGA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR CAA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGATGGAAGGCGGCGGTTaGCTGGTCTCTCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SELFRRSSTQACILSQVWMEGGG*LVSLAW
Trigger: CCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCAT...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
3UTR-3UTR CAA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCATGGAAGGCGGCGGTTaGCTGGTCTCTCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFMEGGG*LVSLAW
Trigger: CCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCAT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
3UTR GCA 72 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTaGATCCTTTCAGATGACAGACACTCTCGTCTTCTG +
Preference number: 3 (lower is better)
Translates to: SEGLRTFSARLA*ILSDDRHSRLL
Trigger: CAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR CCA 72 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTaGCCTGCATCCTTTCAGATGACAGACACTCTCGTC +
Preference number: 3 (lower is better)
Translates to: VYLKGSVPFQQG*PASFQMTDTLV
Trigger: GACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR CAA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCATCTACATCTTTCCTTaGGGATGGAGGTTGGCTGAT +
Preference number: 3 (lower is better)
Translates to: VLSLSEGLRTFSARLACIIYIFP*GWRLAD
Trigger: ATCAGCCAACCTCCATCCCAAAGGAAAGATGTAGAT...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR CAA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGAAGCATCCTTCGACCTaGAGAAAGGATCTACATCTT +
Preference number: 3 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRKHPST*RKDLHL
Trigger: AAGATGTAGATCCTTTCTCAAGGTCGAAGGATGCTT...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR-3UTR CAA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAAGCATCCTTCGACCTaGAGAAAGGATCTACATCTT +
Preference number: 3 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFKHPST*RKDLHL
Trigger: AAGATGTAGATCCTTTCTCAAGGTCGAAGGATGCTT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGGGCCACATTCTCAGTaGGCGTGTAGCCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCGPHSQ*ACSQGA
Trigger: CGCCCCCTGGCTACACGCTCACTGAGAATGTGGCCC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGGTGCAGCTCCCGAGTaGCTCGGAGACGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTGAAPE*LGDAGP
Trigger: AGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCTGCTGGCCGGCTGGCTaGGGCTTGGTGTCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLICWPAG*GLVSGA
Trigger: CGCCCCGGACACCAAGCCGCAGCCAGCCGGCCAGCA...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGGCGGGCCGCGTGTaGAGGTCCTTGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTVAGRV*RSLRKG
Trigger: ACCCTTCCTCAAGGACCTGCACACGCGGCCCGCCAC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTGGGTTCCCGGTCACTaGAGCCGGTGCCCGACTCAG +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTWVPGH*SRCPTQ
Trigger: CTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTCTGGTGCCCGTTTCCTaGCCTGGACCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCLVPVS*PGPSSC
Trigger: ACAGGAGCTGGGTCCAGGCCAGGAAACGGGCACCAG...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCCTACCCCTAGCGGGCTaGGCGACCTCCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTLPLAG*ATSLWN
Trigger: GTTCCAGAGGGAGGTCGCCCAGCCCGCTAGGGGTAG...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTGCTGGCCGGCTGGCTaGGGCTTGGTGTCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQCWPAG*GLVSGA
Trigger: CGCCCCGGACACCAAGCCGCAGCCAGCCGGCCAGCA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTCTCTCCGGAGCTCCTaGAGCTGGTACCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTSLRSS*SWYPSS
Trigger: GGAGGACGGGTACCAGCTGCAGGAGCTCCGGAGAGA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTCCACAAACTGCAGGTaGCGGCGGAGCTCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTSTNCR*RRSSVE
Trigger: CTCCACGGAGCTCCGCCGGCACCTGCAGTTTGTGGA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCCCTGTCTCACTGGCGTaGTCTCTCCTCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTPVSLA*SLLPPP
Trigger: GGGAGGAGGGAGGAGAGAGCACGCCAGTGAGACAGG...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTGTGGAGGCCCCGCCTaGGCTGCTTCGGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQCGGPA*AASAPE
Trigger: CTCGGGGGCCGAAGCAGCCCAGGCGGGGCCTCCACA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGCTGCCTCCCTGGTGCTaGGGGGACCACCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWLPPWC*GDHQPP
Trigger: GGGAGGCTGGTGGTCCCCCCAGCACCAGGGAGGCAG...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCCGCAGTGGCTGCTTCTaGCAGTGCTCCGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTRSGCF*QCSGLV
Trigger: GACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCG...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTACCTCCCTCTGGAACTaGTGCCCGTTTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCTSLWN*CPFPGL
Trigger: CAGGCCAGGAAACGGGCACCAGTTCCAGAGGGAGGT...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTCAGTTCTTCTCTCGGTaGTGGATCTGCCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCQFFSR*WICQRR
Trigger: CCTGCGCTGGCAGATCCATCACCGAGAGAAGAACTG...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGTCTCTGTCTCCTCTTaGTGGAGTCTGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTVSVSS*WSLAAC
Trigger: GCAGGCGGCCAGACTCCATCAAGAGGAGACAGAGAC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTTGGCACGTGGTCCCTaGCTGTTCCCTCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCLARGP*LFPRVH
Trigger: ATGAACGCGAGGGAACAGGCAGGGACCACGTGCCAA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGGGCTGTGCAGCACGTaGACACCAGACTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTGLCST*TPDCSV
Trigger: CACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGATGGTCTGCGTCCCTaGTGTCCTGGACCCATTGGT +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCDGLRP*CPGPIG
Trigger: ACCAATGGGTCCAGGACAGCAGGGACGCAGACCATC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCACCAGCCTCCCCTGTTaGGAGGGGACTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTTSLPC*EGTVHI
Trigger: GATGTGGACAGTCCCCTCCCAACAGGGGAGGCTGGT...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTGCTCAGTGAGGACATaGGTCCGCAGTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCCSVRT*VRSGCF
Trigger: GAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTAGACCTGAGGAGCCATaGCTGGCTTGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCRPEEP*LACFLS
Trigger: GGAGAGGAAGCAAGCCAGCCATGGCTCCTCAGGTCT...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTCTTCTTCCACAAACTaGAGGTGCCGGCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTSSSTN*RCRRSS
Trigger: GGAGCTCCGCCGGCACCTGCAGTTTGTGGAAGAAGA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTAGCCGGTTCTCACACTaGAGCTTCAGTACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCSRFSH*SFSTFP
Trigger: CGGGAAGGTACTGAAGCTGCAGTGTGAGAACCGGCT...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTCATCGCTCTCTTTCTTaGCCGCGTCACTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCHRSLS*PRHSRH
Trigger: ATGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATG...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGCATCTCGGTCCTGTCTaGCCAGGGGTCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWHLGPV*PGVWRP
Trigger: CGGCCTCCAGACCCCTGGGCAGACAGGACCGAGATG...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTATTGTCTGGATGGTCTaGGTCCCTGCTGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCIVWMV*VPAVLD
Trigger: GTCCAGGACAGCAGGGACGCAGACCATCCAGACAAT...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCCTGCCTCCCTGGTGCTaGGGGGACCACCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACLPPWC*GDHQPP
Trigger: GGGAGGCTGGTGGTCCCCCCAGCACCAGGGAGGCAG...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGTTCCCAGGGTCCCGATaGGGGAGTCCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWFPGSR*GSPGTQ
Trigger: CTGTGTCCCGGGACTCCCCCATCGGGACCCTGGGAA...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTCCATCTGCTTCCCTTaGCGCCAGTGTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCSICFP*RQCFSS
Trigger: GCTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGAGAAGACACGGGTGTaGTGCCACCTCCGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTEKTRV*CHLRLL
Trigger: CAAAAGCCGGAGGTGGCACCACACCCGTGTCTTCTC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGCCTTGGACTCCAGGTaGGGCCAATCCATTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWALDSR*GQSIAP
Trigger: CGGGGCAATGGATTGGCCTCACCTGGAGTCCAAGGC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGAGAGGGGCTTTCTCTaGAGTTTGGGAGAACCGTAC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCERGFL*SLGEPY
Trigger: GTACGGTTCTCCCAAACTTCAGAGAAAGCCCCTCTC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTGGCTGGTCAGCTTTTaGGAGGGGCTTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCWLVSF*EGLSLK
Trigger: CTTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGGGCCACATTCTCAGTaGGCGTGTAGCCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDGPHSQ*ACSQGA
Trigger: CGCCCCCTGGCTACACGCTCACTGAGAATGTGGCCC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGCTCACTCGGGCTGTTaGCCTCACCTCCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWAHSGC*PHLLRL
Trigger: AAGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGACCTGAGCTCCTGCTaGAGCAGATTCTTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTDLSSC*SRFFSS
Trigger: CGACGAGAAGAATCTGCTGCAGCAGGAGCTCAGGTC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCAGGGCCCTGAAGAGCTaGTGGTTTTCCACCACCTGT +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTRALKS*WFSTTC
Trigger: ACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGCCCT...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTGGCGTACTGCTGCTaGAGCCGCAGCCGCGCATGC +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACILAYCC*SRSRAC
Trigger: GCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAG...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCTGGCGTACTGCTGCTaGAGCCGCAGCCGCGCATGC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMLAYCC*SRSRAC
Trigger: GCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTTGTCGCTGGCGTACTaGTGCTGCAGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQLSLAY*CCSRSR
Trigger: GCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGTCGCCCCCACTCCTaGCGCTCGCTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFCRPHS*RSLSRR
Trigger: GCGTCTGGACAGCGAGCGGCAGGAGTGGGGGCGACA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGACTCAGCGTCGCTGCTaGCGGCGGGGAGTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMTQRRC*RRGVGA
Trigger: AGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGT...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTCTCCCGCCCCAACTTaGCCATCTTTTTGCGCATCA +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCSPAPT*PSFCAS
Trigger: TGATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCTGCCTCCCTGGTGCTaGGGGGACCACCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGLPPWC*GDHQPP
Trigger: GGGAGGCTGGTGGTCCCCCCAGCACCAGGGAGGCAG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCACTGCCTCCCTGGTGCTaGGGGGACCACCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPLPPWC*GDHQPP
Trigger: GGGAGGCTGGTGGTCCCCCCAGCACCAGGGAGGCAG...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCGGTGCAGCTCCCGAGTaGCTCGGAGACGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFGAAPE*LGDAGP
Trigger: AGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACC...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGCCCTGAAGAGCTGCTaGTTTTCCACCACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCALKSC*FSTTCL
Trigger: CAAACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGACGCAGCCTTGTCGCTaGCGTACTGCTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWTQPCR*RTAAAA
Trigger: GGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGT...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTCCATCACCAGGCTGTaGCTGTCAGCCAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTSITRL*LSASSF
Trigger: GAAACTGCTGGCTGACAGCCACAGCCTGGTGATGGA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCAGTACAGGTTCTCACTaGCCGAGCACCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTSTGSH*PSTCPT
Trigger: AGTCGGACAGGTGCTCGGCCAGTGAGAACCTGTACT...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTACGTCCATCAGACGCTaGAACTCGGACATACAGGAC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCTSIRR*NSDIQD
Trigger: GTCCTGTATGTCCGAGTTCCAGCGTCTGATGGACGT...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGCGCAGTGGCTGCTTCTaGCAGTGCTCCGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWRSGCF*QCSGLV
Trigger: GACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCG...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGCGTCCCTGCTGTCCTaGACCCATTGGTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIASLLS*THWSGR
Trigger: CCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGCGTCCCTGCTGTCCTaGACCCATTGGTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWASLLS*THWSGR
Trigger: CCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGTCCTGCTATTTGGCTaGTCAGCTTTTGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCVLLFG*SAFERG
Trigger: GCCCCTCTCAAAAGCTGACCAGCCAAATAGCAGGAC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGGCAGTGGGGGAAGGTaGGGCCCAACGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDGSGGR*GPTGWK
Trigger: CTTCCATCCCGTTGGGCCCCACCTTCCCCCACTGCC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGCGTGTGCAGGTCCTTaGGGAAGGGTCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGACAGP*GRVWRA
Trigger: CGCCCGCCAGACCCTTCCTCAAGGACCTGCACACGC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR TCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGAGACAAGGGTGGAGTaGCATCCTCCTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIETRVE*HPPCCR
Trigger: CCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGGCCACATTCTCAGTaGGCGTGTAGCCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSGPHSQ*ACSQGA
Trigger: CGCCCCCTGGCTACACGCTCACTGAGAATGTGGCCC...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGGGCCACATTCTCAGTaGGCGTGTAGCCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACGPHSQ*ACSQGA
Trigger: CGCCCCCTGGCTACACGCTCACTGAGAATGTGGCCC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACTCTCTCCGGAGCTCCTaGAGCTGGTACCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDSLRSS*SWYPSS
Trigger: GGAGGACGGGTACCAGCTGCAGGAGCTCCGGAGAGA...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGAGCTCCCCGTCCACCTaGCCTGTTTCCGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWSSPST*PVSATF
Trigger: GAAAGTGGCGGAAACAGGGCAGGTGGACGGGGAGCT...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTACTTCTGCAGTTCCTaGTCCAACTCGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCYFCSS*SNSSFS
Trigger: GGAGAAGGACGAGTTGGAGCAGGAACTGCAGAAGTA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCTGGCGTACTGCTGCTaGAGCCGCAGCCGCGCATGC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRLAYCC*SRSRAC
Trigger: GCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAG...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTGTCGCCCCCACTCCTaGCGCTCGCTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGCRPHS*RSLSRR
Trigger: GCGTCTGGACAGCGAGCGGCAGGAGTGGGGGCGACA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCACATCTCGGTCCTGTCTaGCCAGGGGTCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSHLGPV*PGVWRP
Trigger: CGGCCTCCAGACCCCTGGGCAGACAGGACCGAGATG...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGGGCTGTGCAGCACGTaGACACCAGACTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIGLCST*TPDCSV
Trigger: CACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCACTCAGCGTCGCTGCTaGCGGCGGGGAGTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGTQRRC*RRGVGA
Trigger: AGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGT...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTCTCCCGCCCCAACTTaGCCATCTTTTTGCGCATCA +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTSPAPT*PSFCAS
Trigger: TGATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGCCGGCGGAGCTCCGTaGAGGACTCCATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDAGGAP*RTPLSL
Trigger: GAGACTCAATGGAGTCCTCCACGGAGCTCCGCCGGC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTTCCCAGGGTCCCGATaGGGGAGTCCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACFPGSR*GSPGTQ
Trigger: CTGTGTCCCGGGACTCCCCCATCGGGACCCTGGGAA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGGTGCAGCTCCCGAGTaGCTCGGAGACGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITGAAPE*LGDAGP
Trigger: AGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGGTGCAGCTCCCGAGTaGCTCGGAGACGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIGAAPE*LGDAGP
Trigger: AGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTGGCCTCCCAGCCCATaGTGGCTCCCGGAATCCCCA +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACWPPSP*WLPESP
Trigger: TGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGACGCAGCCTTGTCGCTaGCGTACTGCTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQTQPCR*RTAAAA
Trigger: GGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGT...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGACATGGGTCCGCAGTaGCTGCTTCTGGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIDMGPQ*LLLAVL
Trigger: GAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGCCCGTTTCCTGGCCTaGACCCAGCTCCTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMARFLA*TQLLSR
Trigger: CCTCGACAGGAGCTGGGTCCAGGCCAGGAAACGGGC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCCTACCCCTAGCGGGCTaGGCGACCTCCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFLPLAG*ATSLWN
Trigger: GTTCCAGAGGGAGGTCGCCCAGCCCGCTAGGGGTAG...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCTACCCCTAGCGGGCTaGGCGACCTCCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMLPLAG*ATSLWN
Trigger: GTTCCAGAGGGAGGTCGCCCAGCCCGCTAGGGGTAG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCGCGTGTGCAGGTCCTTaGGGAAGGGTCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFACAGP*GRVWRA
Trigger: CGCCCGCCAGACCCTTCCTCAAGGACCTGCACACGC...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR TCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCCCCCTCGATCCTGATTaGGCTGCCATTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIPLDPD*AAIPAA
Trigger: AGCAGCTGGAATGGCAGCTCAATCAGGATCGAGGGG...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTCGCTGGTGAGACCTaGGGAGCCATGGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSVAGET*GAMAGL
Trigger: CAAGCCAGCCATGGCTCCTCAGGTCTCACCAGCGAC...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCTGTGGCTGTCGCTGGTaGGACCTGAGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACICGCRW*DLRSHG
Trigger: GCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACA...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTGTGGCTGTCGCTGGTaGGACCTGAGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMCGCRW*DLRSHG
Trigger: GCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGTGGCGGGCCGCGTGTaGAGGTCCTTGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITVAGRV*RSLRKG
Trigger: ACCCTTCCTCAAGGACCTGCACACGCGGCCCGCCAC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTCTCTCCGGAGCTCCTaGAGCTGGTACCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACSLRSS*SWYPSS
Trigger: GGAGGACGGGTACCAGCTGCAGGAGCTCCGGAGAGA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCTCTTCTTCCACAAACTaGAGGTGCCGGCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLISSSTN*RCRRSS
Trigger: GGAGCTCCGCCGGCACCTGCAGTTTGTGGAAGAAGA...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCTCACTCGGGCTGTTaGCCTCACCTCCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSAHSGC*PHLLRL
Trigger: AAGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGC...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGCTCACTCGGGCTGTTaGCCTCACCTCCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMAHSGC*PHLLRL
Trigger: AAGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACCCTCCCTCCTCCATCTaGTTCCCTTGGCGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDPPSSI*FPWRQC
Trigger: ACACTGGCGCCAAGGGAAGCAGATGGAGGAGGGAGG...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCCTCCCTCCTCCATCTaGTTCCCTTGGCGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQPPSSI*FPWRQC
Trigger: ACACTGGCGCCAAGGGAAGCAGATGGAGGAGGGAGG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATTGTCGCTGGCGTACTaGTGCTGCAGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPLSLAY*CCSRSR
Trigger: GCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTGTCGCCCCCACTCCTaGCGCTCGCTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHCRPHS*RSLSRR
Trigger: GCGTCTGGACAGCGAGCGGCAGGAGTGGGGGCGACA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCATCTCGGTCCTGTCTaGCCAGGGGTCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGHLGPV*PGVWRP
Trigger: CGGCCTCCAGACCCCTGGGCAGACAGGACCGAGATG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCATGGGTCCGCAGTGGCTaGTTCTGGCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSWVRSG*FWQCSG
Trigger: TCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCA...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGGTCCGCAGTGGCTaGTTCTGGCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFWVRSG*FWQCSG
Trigger: TCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGGGCTGTGCAGCACGTaGACACCAGACTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDGLCST*TPDCSV
Trigger: CACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGATGGTCTGCGTCCCTaGTGTCCTGGACCCATTGGT +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIDGLRP*CPGPIG
Trigger: ACCAATGGGTCCAGGACAGCAGGGACGCAGACCATC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCACCTGTCTCACTGGCGTaGTCTCTCCTCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSPVSLA*SLLPPP
Trigger: GGGAGGAGGGAGGAGAGAGCACGCCAGTGAGACAGG...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCCCTGTCTCACTGGCGTaGTCTCTCCTCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFPVSLA*SLLPPP
Trigger: GGGAGGAGGGAGGAGAGAGCACGCCAGTGAGACAGG...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCCGCACTGTCATCCTTaGGCCTCGGTGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMPHCHP*ASVPAS
Trigger: GGAAGCTGGCACCGAGGCGCAAGGATGACAGTGCGG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTGGGTTCCCGGTCACTaGAGCCGGTGCCCGACTCAG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIWVPGH*SRCPTQ
Trigger: CTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACACCAGCCTCCCCTGTTaGGAGGGGACTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDTSLPC*EGTVHI
Trigger: GATGTGGACAGTCCCCTCCCAACAGGGGAGGCTGGT...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGCCGGCGGAGCTCCGTaGAGGACTCCATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACAGGAP*RTPLSL
Trigger: GAGACTCAATGGAGTCCTCCACGGAGCTCCGCCGGC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTCGCAGTCCTGAGTCGTaGATGAAACCATCTGTATCA +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCRSPES*MKPSVS
Trigger: TGATACAGATGGTTTCATCCACGACTCAGGACTGCG...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATTCCCAGGGTCCCGATaGGGGAGTCCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITFPGSR*GSPGTQ
Trigger: CTGTGTCCCGGGACTCCCCCATCGGGACCCTGGGAA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACACCTCCCAGCCCATGGTaGCTCCCGGAATCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITPPSPW*LPESPS
Trigger: GGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGG...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCACCTCCCAGCCCATGGTaGCTCCCGGAATCCCCATCC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPPPSPW*LPESPS
Trigger: GGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGG...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCCTCCCAGCCCATGGTaGCTCCCGGAATCCCCATCC +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIPPSPW*LPESPS
Trigger: GGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATGGCCTCCCAGCCCATaGTGGCTCCCGGAATCCCCA +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPWPPSP*WLPESP
Trigger: TGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGGGCATGCTCTCCCATaGGAAGGCTACAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWGHALP*EGYSLG
Trigger: ACCAAGGCTGTAGCCTTCCCATGGGAGAGCATGCCC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGGCAGTGCTCCGGACTaGTCATGGTGTCTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWGSAPD*SWCLSS
Trigger: TGACGACAGACACCATGACCAGTCCGGAGCACTGCC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCACGCAGTGGCTGCTTCTaGCAGTGCTCCGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSRSGCF*QCSGLV
Trigger: GACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCG...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCCTGGACCCATTGGTCTaGCAGGCCATATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLILDPLV*QAISLT
Trigger: CGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAG...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGCTGGACCCATTGGTCTaGCAGGCCATATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWLDPLV*QAISLT
Trigger: CGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAG...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCCTGTCCTGGACCCATTaGTCTGGCAGGCCATATCCC +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLILSWTH*SGRPYP
Trigger: GGGATATGGCCTGCCAGACCAATGGGTCCAGGACAG...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGCGTCCCTGCTGTCCTaGACCCATTGGTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACIASLLS*THWSGR
Trigger: CCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGCCCGTTTCCTGGCCTaGACCCAGCTCCTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIARFLA*TQLLSR
Trigger: CCTCGACAGGAGCTGGGTCCAGGCCAGGAAACGGGC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGCCCGTTTCCTGGCCTaGACCCAGCTCCTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRARFLA*TQLLSR
Trigger: CCTCGACAGGAGCTGGGTCCAGGCCAGGAAACGGGC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCCTGGTGCCCGTTTCCTaGCCTGGACCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFLVPVS*PGPSSC
Trigger: ACAGGAGCTGGGTCCAGGCCAGGAAACGGGCACCAG...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGACCTCCCTCTGGAACTaGTGCCCGTTTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQTSLWN*CPFPGL
Trigger: CAGGCCAGGAAACGGGCACCAGTTCCAGAGGGAGGT...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGTCTGCTCGGCTTTCCTaGGTCGGTACTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWSARLS*VGTAGF
Trigger: GAATCCTGCAGTACCGACTCAGGAAAGCCGAGCAGA...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGTTCGTGGTGTAATCTaGCAGACACATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCVRGVI*QTHLWL
Trigger: TAGCCAAAGATGTGTCTGTCAGATTACACCACGAAC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGGTGAGGCTCAAACTTaGACTTGCTCAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIGEAQT*TCSARG
Trigger: CCCACGAGCTGAGCAAGTTCAAGTTTGAGCCTCACC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGGTGAGGCTCAAACTTaGACTTGCTCAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWGEAQT*TCSARG
Trigger: CCCACGAGCTGAGCAAGTTCAAGTTTGAGCCTCACC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGCCTTGGACTCCAGGTaGGGCCAATCCATTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIALDSR*GQSIAP
Trigger: CGGGGCAATGGATTGGCCTCACCTGGAGTCCAAGGC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGAGCTGGATGACTCTGTaGGGTGGGATAAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWSWMTL*GGIRAR
Trigger: TCTCGCCCTTATCCCACCTCACAGAGTCATCCAGCT...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACCCCCTCGATCCTGATTaGGCTGCCATTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDPLDPD*AAIPAA
Trigger: AGCAGCTGGAATGGCAGCTCAATCAGGATCGAGGGG...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGAGACAAGGGTGGAGTaGCATCCTCCTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACIETRVE*HPPCCR
Trigger: CCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGAGACAAGGGTGGAGTaGCATCCTCCTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACETRVE*HPPCCR
Trigger: CCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGTGCAAGGCCACCTGTTaGGCACAGGTTCTGGATGAC +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWCKATC*AQVLDD
Trigger: GTCATCCAGAACCTGTGCTCAACAGGTGGCCTTGCA...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTCTGCAGGCCCACGCTaGTTGTCTGGATGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMSAGPR*LSGWSA
Trigger: CGCAGACCATCCAGACAATCAGCGTGGGCCTGCAGA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCTGGGGTATGCCTGGTaGGGTCCTGCTATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQLGYAW*GPAIWL
Trigger: CAGCCAAATAGCAGGACCTCACCAGGCATACCCCAG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGTCGCTGGTGAGACCTaGGGAGCCATGGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPVAGET*GAMAGL
Trigger: CAAGCCAGCCATGGCTCCTCAGGTCTCACCAGCGAC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGTCGCTGGTGAGACCTaGGGAGCCATGGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIVAGET*GAMAGL
Trigger: CAAGCCAGCCATGGCTCCTCAGGTCTCACCAGCGAC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATGTGGCTGTCGCTGGTaGGACCTGAGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITCGCRW*DLRSHG
Trigger: GCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACTTGGCACGTGGTCCCTaGCTGTTCCCTCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDLARGP*LFPRVH
Trigger: ATGAACGCGAGGGAACAGGCAGGGACCACGTGCCAA...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTCCACAAACTGCAGGTaGCGGCGGAGCTCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGSTNCR*RRSSVE
Trigger: CTCCACGGAGCTCCGCCGGCACCTGCAGTTTGTGGA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGCTCACTCGGGCTGTTaGCCTCACCTCCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRAHSGC*PHLLRL
Trigger: AAGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGACCTGAGCTCCTGCTaGAGCAGATTCTTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWDLSSC*SRFFSS
Trigger: CGACGAGAAGAATCTGCTGCAGCAGGAGCTCAGGTC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCCCTCCCTCCTCCATCTaGTTCCCTTGGCGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFPPSSI*FPWRQC
Trigger: ACACTGGCGCCAAGGGAAGCAGATGGAGGAGGGAGG...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCCTCCCTCCTCCATCTaGTTCCCTTGGCGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMPPSSI*FPWRQC
Trigger: ACACTGGCGCCAAGGGAAGCAGATGGAGGAGGGAGG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTGTCGCCCCCACTCCTaGCGCTCGCTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFCRPHS*RSLSRR
Trigger: GCGTCTGGACAGCGAGCGGCAGGAGTGGGGGCGACA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCGGCTGCTTCTGGCAGTaGTCCGGACTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFGCFWQ*SGLVMV
Trigger: CACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCC...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATGGGTCCGCAGTGGCTaGTTCTGGCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITWVRSG*FWQCSG
Trigger: TCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTGGGTCCGCAGTGGCTaGTTCTGGCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIWVRSG*FWQCSG
Trigger: TCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCACGTGCACACCAGACTaGTCAGTGAGGACATGGGTC +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLITCTPD*SVRTWV
Trigger: GACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGT...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGATGGTCTGCGTCCCTaGTGTCCTGGACCCATTGGT +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQDGLRP*CPGPIG
Trigger: ACCAATGGGTCCAGGACAGCAGGGACGCAGACCATC...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCACCTGTCTCACTGGCGTaGTCTCTCCTCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPPVSLA*SLLPPP
Trigger: GGGAGGAGGGAGGAGAGAGCACGCCAGTGAGACAGG...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCGGAGCTCCTGCAGCTaGTACCCGTCCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGRSSCS*YPSSSR
Trigger: TCTGGAGGAGGACGGGTACCAGCTGCAGGAGCTCCG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCGGAGCTCCTGCAGCTaGTACCCGTCCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRRSSCS*YPSSSR
Trigger: TCTGGAGGAGGACGGGTACCAGCTGCAGGAGCTCCG...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCGGAGCTCCTGCAGCTaGTACCCGTCCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIRSSCS*YPSSSR
Trigger: TCTGGAGGAGGACGGGTACCAGCTGCAGGAGCTCCG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAACCAGCCTCCCCTGTTaGGAGGGGACTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSTSLPC*EGTVHI
Trigger: GATGTGGACAGTCCCCTCCCAACAGGGGAGGCTGGT...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGCCGGCGGAGCTCCGTaGAGGACTCCATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIAGGAP*RTPLSL
Trigger: GAGACTCAATGGAGTCCTCCACGGAGCTCCGCCGGC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGCTGCTCTCTCAGTTTaGACTGCAAGTCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWAALSV*TASLGP
Trigger: TGGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCTCCCAGCCCATGGTaGCTCCCGGAATCCCCATCC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHPPSPW*LPESPS
Trigger: GGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTGGCCTCCCAGCCCATaGTGGCTCCCGGAATCCCCA +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFWPPSP*WLPESP
Trigger: TGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGGAAGGCTACAGCCTTaGTCAGCATCCTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIGRLQP*SASSWS
Trigger: AGACCAGGAGGATGCTGACCAAGGCTGTAGCCTTCC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCACGCAGCCTTGTCGCTaGCGTACTGCTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGTQPCR*RTAAAA
Trigger: GGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGT...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGACAAGGCTCTGTGGTaGCTTCATGCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACIDKALW*LHAPPS
Trigger: GGAGGGTGGGGCATGAAGCCACCACAGAGCCTTGTC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGGCAGTGCTCCGGACTaGTCATGGTGTCTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQGSAPD*SWCLSS
Trigger: TGACGACAGACACCATGACCAGTCCGGAGCACTGCC...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCGCAGTGGCTGCTTCTaGCAGTGCTCCGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRRSGCF*QCSGLV
Trigger: GACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCG...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCGACATGGGTCCGCAGTaGCTGCTTCTGGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFDMGPQ*LLLAVL
Trigger: GAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTC...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGACATGGGTCCGCAGTaGCTGCTTCTGGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMDMGPQ*LLLAVL
Trigger: GAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGCGTCCCTGCTGTCCTaGACCCATTGGTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIASLLS*THWSGR
Trigger: CCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGAGAAGACACGGGTGTaGTGCCACCTCCGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDEKTRV*CHLRLL
Trigger: CAAAAGCCGGAGGTGGCACCACACCCGTGTCTTCTC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCTGGTGCCCGTTTCCTaGCCTGGACCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRLVPVS*PGPSSC
Trigger: ACAGGAGCTGGGTCCAGGCCAGGAAACGGGCACCAG...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCACTGGTGCCCGTTTCCTaGCCTGGACCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPLVPVS*PGPSSC
Trigger: ACAGGAGCTGGGTCCAGGCCAGGAAACGGGCACCAG...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAACCTCCCTCTGGAACTaGTGCCCGTTTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSTSLWN*CPFPGL
Trigger: CAGGCCAGGAAACGGGCACCAGTTCCAGAGGGAGGT...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTGGGCGACCTCCCTCTaGAACTGGTGCCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMWATSL*NWCPFP
Trigger: AGGAAACGGGCACCAGTTCCAGAGGGAGGTCGCCCA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCCTACCCCTAGCGGGCTaGGCGACCTCCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFLPLAG*ATSLWN
Trigger: GTTCCAGAGGGAGGTCGCCCAGCCCGCTAGGGGTAG...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGAGACCTGAGGAGCCATaGCTGGCTTGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQRPEEP*LACFLS
Trigger: GGAGAGGAAGCAAGCCAGCCATGGCTCCTCAGGTCT...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCCAGTTTGGTTCTCCATaGATCCTGGCTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIQFGSP*ILARLA
Trigger: TGCCAGCCGAGCCAGGATCCATGGAGAACCAAACTG...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGCAGTTTGGTTCTCCATaGATCCTGGCTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWQFGSP*ILARLA
Trigger: TGCCAGCCGAGCCAGGATCCATGGAGAACCAAACTG...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGTGTGGCTTCTCCTCTaGTGGGTCCTCCTCACCGTG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMVWLLL*WVLLTV
Trigger: CACGGTGAGGAGGACCCACCAGAGGAGAAGCCACAC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGGTGAGGCTCAAACTTaGACTTGCTCAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDGEAQT*TCSARG
Trigger: CCCACGAGCTGAGCAAGTTCAAGTTTGAGCCTCACC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGCCTTGGACTCCAGGTaGGGCCAATCCATTGCCCCG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHALDSR*GQSIAP
Trigger: CGGGGCAATGGATTGGCCTCACCTGGAGTCCAAGGC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCCCCCTCGATCCTGATTaGGCTGCCATTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACPLDPD*AAIPAA
Trigger: AGCAGCTGGAATGGCAGCTCAATCAGGATCGAGGGG...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCCTCCATCTCTAGGTTaGAACAGCTCTGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQPPSLG*NSSGLP
Trigger: TGGGAGGCCAGAGCTGTTTCAACCTAGAGATGGAGG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCCAGTTCTTCTCTCGGTaGTGGATCTGCCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACQFFSR*WICQRR
Trigger: CCTGCGCTGGCAGATCCATCACCGAGAGAAGAACTG...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCACAGTTCTTCTCTCGGTaGTGGATCTGCCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSQFFSR*WICQRR
Trigger: CCTGCGCTGGCAGATCCATCACCGAGAGAAGAACTG...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGTCTGCAGGCCCACGCTaGTTGTCTGGATGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRSAGPR*LSGWSA
Trigger: CGCAGACCATCCAGACAATCAGCGTGGGCCTGCAGA...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCACTGGGGTATGCCTGGTaGGGTCCTGCTATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSLGYAW*GPAIWL
Trigger: CAGCCAAATAGCAGGACCTCACCAGGCATACCCCAG...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGTCGCTGGTGAGACCTaGGGAGCCATGGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHVAGET*GAMAGL
Trigger: CAAGCCAGCCATGGCTCCTCAGGTCTCACCAGCGAC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTGTGGCTGTCGCTGGTaGGACCTGAGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHCGCRW*DLRSHG
Trigger: GCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGCTCCACGATCTTCCTaGCCAAGATGCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQAPRSS*PRCWLP
Trigger: AGGAAGCCAGCATCTTGGGCAGGAAGATCGTGGAGC...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTCCACAAACTGCAGGTaGCGGCGGAGCTCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSTNCR*RRSSVE
Trigger: CTCCACGGAGCTCCGCCGGCACCTGCAGTTTGTGGA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCATGCAGGGCCAGGCTGTaGATCTCCAGTTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSCRARL*ISSSFH
Trigger: GTGGAAGGAACTGGAGATGCACAGCCTGGCCCTGCA...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGACCTGAGCTCCTGCTaGAGCAGATTCTTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDDLSSC*SRFFSS
Trigger: CGACGAGAAGAATCTGCTGCAGCAGGAGCTCAGGTC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTTGTCGCTGGCGTACTaGTGCTGCAGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFLSLAY*CCSRSR
Trigger: GCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGGCTGCAGAGGAAACTaGCGCTTCTCCGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACGCRGN*RFSGDF
Trigger: AAAGTCCCCGGAGAAGCGGCAGTTTCCTCTGCAGCC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGGCTGCTTCTGGCAGTaGTCCGGACTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRGCFWQ*SGLVMV
Trigger: CACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGGCTGCTTCTGGCAGTaGTCCGGACTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGGCFWQ*SGLVMV
Trigger: CACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGGGCTGTGCAGCACGTaGACACCAGACTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITGLCST*TPDCSV
Trigger: CACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCGATGGTCTGCGTCCCTaGTGTCCTGGACCCATTGGT +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFDGLRP*CPGPIG
Trigger: ACCAATGGGTCCAGGACAGCAGGGACGCAGACCATC...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTGGAAGGCGGCGGTTTaGTGGTCTCTCTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIWKAAV*WSLWPG
Trigger: TCCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTCCGCACTGTCATCCTaGTTAACAAGTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCSALSS*LTSFFS
Trigger: AGAGAAGAAACTTGTTAACCAGGATGACAGTGCGGA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGACCAGCCTCCCCTGTTaGGAGGGGACTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRTSLPC*EGTVHI
Trigger: GATGTGGACAGTCCCCTCCCAACAGGGGAGGCTGGT...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGCCGGCGGAGCTCCGTaGAGGACTCCATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHAGGAP*RTPLSL
Trigger: GAGACTCAATGGAGTCCTCCACGGAGCTCCGCCGGC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCCATCGATCTGTAGCCTaGCTGACTTCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIHRSVA*LTSAPP
Trigger: AGGAGGAGCTGAAGTCAGCCAGGCTACAGATCGATG...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTTCCCAGGGTCCCGATaGGGGAGTCCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFFPGSR*GSPGTQ
Trigger: CTGTGTCCCGGGACTCCCCCATCGGGACCCTGGGAA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGTTTGGACTGCAAGTCTaGGCCCAACTCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWFGLQV*AQLLSQ
Trigger: CTGGGAAAGGAGTTGGGCCCAGACTTGCAGTCCAAA...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGTGGTCAGCATCCTCCTaGTCTATCCCATCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWWSASS*SIPSVW
Trigger: CCAGACAGATGGGATAGACCAGGAGGATGCTGACCA...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGGCATGCTCTCCCATaGGAAGGCTACAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSGHALP*EGYSLG
Trigger: ACCAAGGCTGTAGCCTTCCCATGGGAGAGCATGCCC...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCCGACTCCTTCAGTTTaGAGAGCGGCCGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQPTPSV*RAAGLQ
Trigger: TTGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGGGTGGCGGATCCCCTaGATCATCATCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACIGWRIP*IIIQGQ
Trigger: TTGTCCCTGGATGATGATCCAGGGGATCCGCCACCC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGGGTGGCGGATCCCCTaGATCATCATCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACGWRIP*IIIQGQ
Trigger: TTGTCCCTGGATGATGATCCAGGGGATCCGCCACCC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGACAAGGCTCTGTGGTaGCTTCATGCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPDKALW*LHAPPS
Trigger: GGAGGGTGGGGCATGAAGCCACCACAGAGCCTTGTC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGACAAGGCTCTGTGGTaGCTTCATGCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRDKALW*LHAPPS
Trigger: GGAGGGTGGGGCATGAAGCCACCACAGAGCCTTGTC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTGCTCAGTGAGGACATaGGTCCGCAGTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACCSVRT*VRSGCF
Trigger: GAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCCTGGACCCATTGGTCTaGCAGGCCATATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFLDPLV*QAISLT
Trigger: CGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAG...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCTGTCCTGGACCCATTaGTCTGGCAGGCCATATCCC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMLSWTH*SGRPYP
Trigger: GGGATATGGCCTGCCAGACCAATGGGTCCAGGACAG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGAGAAGACACGGGTGTaGTGCCACCTCCGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMEKTRV*CHLRLL
Trigger: CAAAAGCCGGAGGTGGCACCACACCCGTGTCTTCTC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATGGGCGACCTCCCTCTaGAACTGGTGCCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITWATSL*NWCPFP
Trigger: AGGAAACGGGCACCAGTTCCAGAGGGAGGTCGCCCA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTGGGCGACCTCCCTCTaGAACTGGTGCCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGWATSL*NWCPFP
Trigger: AGGAAACGGGCACCAGTTCCAGAGGGAGGTCGCCCA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCAAGGCAGTTCCTCCATaGATCCTGGCTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFKAVPP*ILARLA
Trigger: TGCCAGCCGAGCCAGGATCCATGGAGGAACTGCCTT...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTGGTCTCTCTGGCCTaGAAAAGCAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACILVSLA*KSRALG
Trigger: CCCTAGAGCCCTGCTTTTCCAGGCCAGAGAGACCAG...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCTTCTCCTCTGGTaGGTCCTCCTCACCGTGTTC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFWLLLW*VLLTVF
Trigger: GAACACGGTGAGGAGGACCCACCAGAGGAGAAGCCA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTCTGCTCGGCTTTCCTaGGTCGGTACTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACSARLS*VGTAGF
Trigger: GAATCCTGCAGTACCGACTCAGGAAAGCCGAGCAGA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR TCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGGTGAGGCTCAAACTTaGACTTGCTCAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMGEAQT*TCSARG
Trigger: CCCACGAGCTGAGCAAGTTCAAGTTTGAGCCTCACC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCACCCTGACTCCTGGTaGGGCTCAAACTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQHPDSW*GSNLNL
Trigger: CAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCAGCTGGATGACTCTGTaGGGTGGGATAAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACISWMTL*GGIRAR
Trigger: TCTCGCCCTTATCCCACCTCACAGAGTCATCCAGCT...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCCCCTCGATCCTGATTaGGCTGCCATTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGPLDPD*AAIPAA
Trigger: AGCAGCTGGAATGGCAGCTCAATCAGGATCGAGGGG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCAGTTCTTCTCTCGGTaGTGGATCTGCCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGQFFSR*WICQRR
Trigger: CCTGCGCTGGCAGATCCATCACCGAGAGAAGAACTG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGAGACAAGGGTGGAGTaGCATCCTCCTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHETRVE*HPPCCR
Trigger: CCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTCTGCAGGCCCACGCTaGTTGTCTGGATGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSAGPR*LSGWSA
Trigger: CGCAGACCATCCAGACAATCAGCGTGGGCCTGCAGA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGAGAGGGGCTTTCTCTaGAGTTTGGGAGAACCGTAC +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQERGFL*SLGEPY
Trigger: GTACGGTTCTCCCAAACTTCAGAGAAAGCCCCTCTC...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCATCTCCTCCATCTCTaGACGGAGCTCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMHLLHL*TELIQL
Trigger: GAGCTGGATGAGCTCCGTGCAGAGATGGAGGAGATG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATAGCTCCCCGTCCACCTaGCCTGTTTCCGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSSPST*PVSATF
Trigger: GAAAGTGGCGGAAACAGGGCAGGTGGACGGGGAGCT...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAGCTCCCCGTCCACCTaGCCTGTTTCCGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFSSPST*PVSATF
Trigger: GAAAGTGGCGGAAACAGGGCAGGTGGACGGGGAGCT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTCTTCCTGCCCAAGATaGTGGCTTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMSSCPR*WLPPPP
Trigger: TGGTGGAGGAGGAAGCCAGCATCTTGGGCAGGAAGA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCATCTTCCTGCCCAAGATaGTGGCTTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSSSCPR*WLPPPP
Trigger: TGGTGGAGGAGGAAGCCAGCATCTTGGGCAGGAAGA...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGCTCCACGATCTTCCTaGCCAAGATGCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMAPRSS*PRCWLP
Trigger: AGGAAGCCAGCATCTTGGGCAGGAAGATCGTGGAGC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTTGGCACGTGGTCCCTaGCTGTTCCCTCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGLARGP*LFPRVH
Trigger: ATGAACGCGAGGGAACAGGCAGGGACCACGTGCCAA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATCTTCTTCCACAAACTaGAGGTGCCGGCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITSSSTN*RCRRSS
Trigger: GGAGCTCCGCCGGCACCTGCAGTTTGTGGAAGAAGA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCATCGCTCTCTTTCTTaGCCGCGTCACTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMHRSLS*PRHSRH
Trigger: ATGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCACATCGCTCTCTTTCTTaGCCGCGTCACTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSHRSLS*PRHSRH
Trigger: ATGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATG...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGTGCAGGGCCAGGCTGTaGATCTCCAGTTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRCRARL*ISSSFH
Trigger: GTGGAAGGAACTGGAGATGCACAGCCTGGCCCTGCA...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGACCTGAGCTCCTGCTaGAGCAGATTCTTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACDLSSC*SRFFSS
Trigger: CGACGAGAAGAATCTGCTGCAGCAGGAGCTCAGGTC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAAGGGACCTGAGCTCCTaGTGCAGCAGATTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSRDLSS*CSRFFS
Trigger: CGAGAAGAATCTGCTGCAGCAGGAGCTCAGGTCCCT...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGAGGGACCTGAGCTCCTaGTGCAGCAGATTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMRDLSS*CSRFFS
Trigger: CGAGAAGAATCTGCTGCAGCAGGAGCTCAGGTCCCT...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCAGGGCCCTGAAGAGCTaGTGGTTTTCCACCACCTGT +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFRALKS*WFSTTC
Trigger: ACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGCCCT...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAAGGGCCCTGAAGAGCTaGTGGTTTTCCACCACCTGT +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSRALKS*WFSTTC
Trigger: ACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGCCCT...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGGCTGCAGAGGAAACTaGCGCTTCTCCGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRGCRGN*RFSGDF
Trigger: AAAGTCCCCGGAGAAGCGGCAGTTTCCTCTGCAGCC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGGCTGCAGAGGAAACTaGCGCTTCTCCGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPGCRGN*RFSGDF
Trigger: AAAGTCCCCGGAGAAGCGGCAGTTTCCTCTGCAGCC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGGCTGCAGAGGAAACTaGCGCTTCTCCGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIGCRGN*RFSGDF
Trigger: AAAGTCCCCGGAGAAGCGGCAGTTTCCTCTGCAGCC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCACTCAGCCCTGGGGGATaGGTAATCCCAGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPLSPGG*VIPVVA
Trigger: AGCAACGACTGGGATTACGCATCCCCCAGGGCTGAG...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGGCTGCTTCTGGCAGTaGTCCGGACTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHGCFWQ*SGLVMV
Trigger: CACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCACGTGCACACCAGACTaGTCAGTGAGGACATGGGTC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACTCTPD*SVRTWV
Trigger: GACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGT...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTGCCAGGTTCCCTCTTaGTCTGCTCATAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQCQVPS*SAHRKG
Trigger: CCCTTTCCTATGAGCAGAGCAAGAGGGAACCTGGCA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATTGTCTGGATGGTCTaGGTCCCTGCTGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACIVWMV*VPAVLD
Trigger: GTCCAGGACAGCAGGGACGCAGACCATCCAGACAAT...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCCTCTCCACCTCATTCTaGAGGGCCTGTCTGGATACC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACLSTSF*RACLDT
Trigger: GGTATCCAGACAGGCCCTCCAGAATGAGGTGGAGAG...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACCATCGATCTGTAGCCTaGCTGACTTCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEGLRTFSARLACILSDDHRSVA*LTSAPP
Trigger: AGGAGGAGCTGAAGTCAGCCAGGCTACAGATCGATG...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTCACCTCCTCCGCCTTaGACTCCAGGTGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGSPPPP*TPGEAN
Trigger: ATTGGCCTCACCTGGAGTCCAAGGCGGAGGAGGTGA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATCACCTCCTCCGCCTTaGACTCCAGGTGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITSPPPP*TPGEAN
Trigger: ATTGGCCTCACCTGGAGTCCAAGGCGGAGGAGGTGA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGCTGCTCTCTCAGTTTaGACTGCAAGTCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACAALSV*TASLGP
Trigger: TGGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTCCATCTGCTTCCCTTaGCGCCAGTGTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACSICFP*RQCFSS
Trigger: GCTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTACGCAGCCTTGTCGCTaGCGTACTGCTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFTQPCR*RTAAAA
Trigger: GGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGT...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCCTTCACAGGGCCACATaGACACAGGTCTGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFLHRAT*TQVWRS
Trigger: ACTCCTCCAGACCTGTGTCCATGTGGCCCTGTGAAG...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCCCGACTCCTTCAGTTTaGAGAGCGGCCGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFPTPSV*RAAGLQ
Trigger: TTGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGG...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAAGTACAGGTTCTCACTaGCCGAGCACCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSSTGSH*PSTCPT
Trigger: AGTCGGACAGGTGCTCGGCCAGTGAGAACCTGTACT...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGGGTGGCGGATCCCCTaGATCATCATCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPGWRIP*IIIQGQ
Trigger: TTGTCCCTGGATGATGATCCAGGGGATCCGCCACCC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGTCGGGAGACAAGGGTaGAGTGACATCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACIVGRQG*SDILLA
Trigger: AGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGAC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGGCAGTGCTCCGGACTaGTCATGGTGTCTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGGSAPD*SWCLSS
Trigger: TGACGACAGACACCATGACCAGTCCGGAGCACTGCC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATGCTCAGTGAGGACATaGGTCCGCAGTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITCSVRT*VRSGCF
Trigger: GAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTGCTCAGTGAGGACATaGGTCCGCAGTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQICSVRT*VRSGCF
Trigger: GAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCTGGACCCATTGGTCTaGCAGGCCATATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRLDPLV*QAISLT
Trigger: CGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAG...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCACTGTCCTGGACCCATTaGTCTGGCAGGCCATATCCC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPLSWTH*SGRPYP
Trigger: GGGATATGGCCTGCCAGACCAATGGGTCCAGGACAG...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCTGTCCTGGACCCATTaGTCTGGCAGGCCATATCCC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGLSWTH*SGRPYP
Trigger: GGGATATGGCCTGCCAGACCAATGGGTCCAGGACAG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGAGAAGACACGGGTGTaGTGCCACCTCCGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPEKTRV*CHLRLL
Trigger: CAAAAGCCGGAGGTGGCACCACACCCGTGTCTTCTC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCCTGCACCTTCTCAATaGCAGGGGCCACCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIPAPSQ*QGPPVY
Trigger: GTAGACAGGTGGCCCCTGCCATTGAGAAGGTGCAGG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGTCCTGCTATTTGGCTaGTCAGCTTTTGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQVLLFG*SAFERG
Trigger: GCCCCTCTCAAAAGCTGACCAGCCAAATAGCAGGAC...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCACCTCCCTCTGGAACTaGTGCCCGTTTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFTSLWN*CPFPGL
Trigger: CAGGCCAGGAAACGGGCACCAGTTCCAGAGGGAGGT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTGGGCGACCTCCCTCTaGAACTGGTGCCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFWATSL*NWCPFP
Trigger: AGGAAACGGGCACCAGTTCCAGAGGGAGGTCGCCCA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAAGACCTGAGGAGCCATaGCTGGCTTGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITRPEEP*LACFLS
Trigger: GGAGAGGAAGCAAGCCAGCCATGGCTCCTCAGGTCT...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCAAGGCAGTTCCTCCATaGATCCTGGCTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGKAVPP*ILARLA
Trigger: TGCCAGCCGAGCCAGGATCCATGGAGGAACTGCCTT...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACACTGGTCTCTCTGGCCTaGAAAAGCAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITLVSLA*KSRALG
Trigger: CCCTAGAGCCCTGCTTTTCCAGGCCAGAGAGACCAG...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGTGTGGCTTCTCCTCTaGTGGGTCCTCCTCACCGTG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHVWLLL*WVLLTV
Trigger: CACGGTGAGGAGGACCCACCAGAGGAGAAGCCACAC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGGTGCCAGCTTCCTTTaGGTTTTGGTGGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITGASFL*VLVADL
Trigger: CAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGTCTGCTCGGCTTTCCTaGGTCGGTACTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRSARLS*VGTAGF
Trigger: GAATCCTGCAGTACCGACTCAGGAAAGCCGAGCAGA...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR TCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGGGAAGCTTCCTCTTTaGCAAACTGAAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIGKLPL*QTEADT
Trigger: AGTGTCAGCTTCAGTTTGTCAAAGAGGAAGCTTCCC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGGGAAGCTTCCTCTTTaGCAAACTGAAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: SELFRRSSTQACILSQVWGKLPL*QTEADT
Trigger: AGTGTCAGCTTCAGTTTGTCAAAGAGGAAGCTTCCC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCCTTCCATCTCTGCTTTaGGGCCACGGTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACLPSLL*GHGFPP
Trigger: AGGTGGAAAACCGTGGCCTCAAAGCAGAGATGGAAG...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCACCCTGACTCCTGGTaGGGCTCAAACTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMHPDSW*GSNLNL
Trigger: CAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAAGCTGGATGACTCTGTaGGGTGGGATAAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITSWMTL*GGIRAR
Trigger: TCTCGCCCTTATCCCACCTCACAGAGTCATCCAGCT...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGAGCTGGATGACTCTGTaGGGTGGGATAAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRSWMTL*GGIRAR
Trigger: TCTCGCCCTTATCCCACCTCACAGAGTCATCCAGCT...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCTGGTCAGCTTTTaGGAGGGGCTTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFWLVSF*EGLSLK
Trigger: CTTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCCTGGGGTATGCCTGGTaGGGTCCTGCTATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFLGYAW*GPAIWL
Trigger: CAGCCAAATAGCAGGACCTCACCAGGCATACCCCAG...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCTGGGGTATGCCTGGTaGGGTCCTGCTATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHLGYAW*GPAIWL
Trigger: CAGCCAAATAGCAGGACCTCACCAGGCATACCCCAG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGACTTTCAGGCTCTTCTaGTCGGCTTTCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMTFRLF*SAFLSR
Trigger: CCGACTCAGGAAAGCCGAGCAGAAGAGCCTGAAAGT...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGCTCCACGATCTTCCTaGCCAAGATGCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGAPRSS*PRCWLP
Trigger: AGGAAGCCAGCATCTTGGGCAGGAAGATCGTGGAGC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTTGGCACGTGGTCCCTaGCTGTTCCCTCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFLARGP*LFPRVH
Trigger: ATGAACGCGAGGGAACAGGCAGGGACCACGTGCCAA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGAGCCGGTTCTCACACTaGAGCTTCAGTACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRSRFSH*SFSTFP
Trigger: CGGGAAGGTACTGAAGCTGCAGTGTGAGAACCGGCT...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCATCGCTCTCTTTCTTaGCCGCGTCACTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGHRSLS*PRHSRH
Trigger: ATGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTGCAGGGCCAGGCTGTaGATCTCCAGTTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFCRARL*ISSSFH
Trigger: GTGGAAGGAACTGGAGATGCACAGCCTGGCCCTGCA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTGCAGGGCCAGGCTGTaGATCTCCAGTTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHCRARL*ISSSFH
Trigger: GTGGAAGGAACTGGAGATGCACAGCCTGGCCCTGCA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCAGGGACCTGAGCTCCTaGTGCAGCAGATTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGRDLSS*CSRFFS
Trigger: CGAGAAGAATCTGCTGCAGCAGGAGCTCAGGTCCCT...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAAGGGCCCTGAAGAGCTaGTGGTTTTCCACCACCTGT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPRALKS*WFSTTC
Trigger: ACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGCCCT...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCCTCAGCCCTGGGGGATaGGTAATCCCAGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFLSPGG*VIPVVA
Trigger: AGCAACGACTGGGATTACGCATCCCCCAGGGCTGAG...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCACGTGCACACCAGACTaGTCAGTGAGGACATGGGTC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGTCTPD*SVRTWV
Trigger: GACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGT...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCTGCCAGGTTCCCTCTTaGTCTGCTCATAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACICQVPS*SAHRKG
Trigger: CCCTTTCCTATGAGCAGAGCAAGAGGGAACCTGGCA...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCATGCCAGGTTCCCTCTTaGTCTGCTCATAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSCQVPS*SAHRKG
Trigger: CCCTTTCCTATGAGCAGAGCAAGAGGGAACCTGGCA...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTCCTCCTTTAAGGCATaGTCCAACAACTTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QACILSQVWLLLWWVLLTSSFKA*SNNFLL
Trigger: CAACAAAAAGTTGTTGGAGCATGCCTTAAAGGAGGA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGAGCCATGGCTGGCTTaGTTCCTCTCCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSEPWLA*FLSSFK
Trigger: CTTAAAGGAGGAGAGGAAGCAAGCCAGCCATGGCTC...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTGGAAGGCGGCGGTTTaGTGGTCTCTCTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFWKAAV*WSLWPG
Trigger: TCCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCACGGTCTCGAGTTCGTaGTGTAATCTGACAGACACA +
Preference number: 4 (lower is better)
Translates to: PASFQMTDTLVFWPHGLITVSSS*CNLTDT
Trigger: TGTGTCTGTCAGATTACACCACGAACTCGAGACCGT...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCTCTCCACCTCATTCTaGAGGGCCTGTCTGGATACC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGLSTSF*RACLDT
Trigger: GGTATCCAGACAGGCCCTCCAGAATGAGGTGGAGAG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCACATCGATCTGTAGCCTaGCTGACTTCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSHRSVA*LTSAPP
Trigger: AGGAGGAGCTGAAGTCAGCCAGGCTACAGATCGATG...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCATCGATCTGTAGCCTaGCTGACTTCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMHRSVA*LTSAPP
Trigger: AGGAGGAGCTGAAGTCAGCCAGGCTACAGATCGATG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTCACCTCCTCCGCCTTaGACTCCAGGTGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFSPPPP*TPGEAN
Trigger: ATTGGCCTCACCTGGAGTCCAAGGCGGAGGAGGTGA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTCACCTCCTCCGCCTTaGACTCCAGGTGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSPPPP*TPGEAN
Trigger: ATTGGCCTCACCTGGAGTCCAAGGCGGAGGAGGTGA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTTTGGACTGCAAGTCTaGGCCCAACTCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMFGLQV*AQLLSQ
Trigger: CTGGGAAAGGAGTTGGGCCCAGACTTGCAGTCCAAA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGCTGCTCTCTCAGTTTaGACTGCAAGTCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIAALSV*TASLGP
Trigger: TGGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTCCATCTGCTTCCCTTaGCGCCAGTGTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGSICFP*RQCFSS
Trigger: GCTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGGAAGGCTACAGCCTTaGTCAGCATCCTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGGRLQP*SASSWS
Trigger: AGACCAGGAGGATGCTGACCAAGGCTGTAGCCTTCC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGGAAGGCTACAGCCTTaGTCAGCATCCTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPGRLQP*SASSWS
Trigger: AGACCAGGAGGATGCTGACCAAGGCTGTAGCCTTCC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGGGCATGCTCTCCCATaGGAAGGCTACAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHGHALP*EGYSLG
Trigger: ACCAAGGCTGTAGCCTTCCCATGGGAGAGCATGCCC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGCCCTGAAGAGCTGCTaGTTTTCCACCACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACIALKSC*FSTTCL
Trigger: CAAACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACATCCATCACCAGGCTGTaGCTGTCAGCCAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITSITRL*LSASSF
Trigger: GAAACTGCTGGCTGACAGCCACAGCCTGGTGATGGA...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATCCATCACCAGGCTGTaGCTGTCAGCCAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPSITRL*LSASSF
Trigger: GAAACTGCTGGCTGACAGCCACAGCCTGGTGATGGA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACACTTCACAGGGCCACATaGACACAGGTCTGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITLHRAT*TQVWRS
Trigger: ACTCCTCCAGACCTGTGTCCATGTGGCCCTGTGAAG...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCTTCACAGGGCCACATaGACACAGGTCTGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQILHRAT*TQVWRS
Trigger: ACTCCTCCAGACCTGTGTCCATGTGGCCCTGTGAAG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCCGACTCCTTCAGTTTaGAGAGCGGCCGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGPTPSV*RAAGLQ
Trigger: TTGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCAGTACAGGTTCTCACTaGCCGAGCACCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGSTGSH*PSTCPT
Trigger: AGTCGGACAGGTGCTCGGCCAGTGAGAACCTGTACT...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAAGTACAGGTTCTCACTaGCCGAGCACCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPSTGSH*PSTCPT
Trigger: AGTCGGACAGGTGCTCGGCCAGTGAGAACCTGTACT...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCACGTCCATCAGACGCTaGAACTCGGACATACAGGAC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACTSIRR*NSDIQD
Trigger: GTCCTGTATGTCCGAGTTCCAGCGTCTGATGGACGT...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGTCGGGAGACAAGGGTaGAGTGACATCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGVGRQG*SDILLA
Trigger: AGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGAC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGTCGGGAGACAAGGGTaGAGTGACATCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPVGRQG*SDILLA
Trigger: AGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGAC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTCCCAGTCGTTGCTATaGAATTCTTCAATGTATTTC +
Preference number: 4 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCSQSLL*NSSMYF
Trigger: GAAATACATTGAAGAATTCCATAGCAACGACTGGGA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCTGCACCTTCTCAATaGCAGGGGCCACCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHPAPSQ*QGPPVY
Trigger: GTAGACAGGTGGCCCCTGCCATTGAGAAGGTGCAGG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATAGACCTGAGGAGCCATaGCTGGCTTGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHRPEEP*LACFLS
Trigger: GGAGAGGAAGCAAGCCAGCCATGGCTCCTCAGGTCT...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTCCTTTGGGTTTTGGTaGCCGACCTGCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQISFGFW*PTCSSQ
Trigger: CTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGCTTCCTTTGGGTTTTaGTGGCCGACCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPASFGF*WPTCSS
Trigger: GGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCACTTCCATCTCTGCTTTaGGGCCACGGTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPLPSLL*GHGFPP
Trigger: AGGTGGAAAACCGTGGCCTCAAAGCAGAGATGGAAG...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCTTCCATCTCTGCTTTaGGGCCACGGTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGLPSLL*GHGFPP
Trigger: AGGTGGAAAACCGTGGCCTCAAAGCAGAGATGGAAG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGCACCCTGACTCCTGGTaGGGCTCAAACTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRHPDSW*GSNLNL
Trigger: CAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTG...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCCCTCCATCTCTAGGTTaGAACAGCTCTGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFPPSLG*NSSGLP
Trigger: TGGGAGGCCAGAGCTGTTTCAACCTAGAGATGGAGG...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTGCAAGGCCACCTGTTaGGCACAGGTTCTGGATGAC +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFCKATC*AQVLDD
Trigger: GTCATCCAGAACCTGTGCTCAACAGGTGGCCTTGCA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTGCAAGGCCACCTGTTaGGCACAGGTTCTGGATGAC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHCKATC*AQVLDD
Trigger: GTCATCCAGAACCTGTGCTCAACAGGTGGCCTTGCA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGAGAGGGGCTTTCTCTaGAGTTTGGGAGAACCGTAC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGERGFL*SLGEPY
Trigger: GTACGGTTCTCCCAAACTTCAGAGAAAGCCCCTCTC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGTGGCTGGTCAGCTTTTaGGAGGGGCTTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRWLVSF*EGLSLK
Trigger: CTTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCA...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTGGCTGGTCAGCTTTTaGGAGGGGCTTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGWLVSF*EGLSLK
Trigger: CTTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCCAACAACTTTTTGTTaGGGATCCGGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQPTTFC*GSGPHS
Trigger: AGAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTACTTTCAGGCTCTTCTaGTCGGCTTTCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQITFRLF*SAFLSR
Trigger: CCGACTCAGGAAAGCCGAGCAGAAGAGCCTGAAAGT...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCTACTTCTGCAGTTCCTaGTCCAACTCGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACIYFCSS*SNSSFS
Trigger: GGAGAAGGACGAGTTGGAGCAGGAACTGCAGAAGTA...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTCTTCCTGCCCAAGATaGTGGCTTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSSCPR*WLPPPP
Trigger: TGGTGGAGGAGGAAGCCAGCATCTTGGGCAGGAAGA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTCTTCTTCCACAAACTaGAGGTGCCGGCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFSSSTN*RCRRSS
Trigger: GGAGCTCCGCCGGCACCTGCAGTTTGTGGAAGAAGA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAGCCGGTTCTCACACTaGAGCTTCAGTACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFSRFSH*SFSTFP
Trigger: CGGGAAGGTACTGAAGCTGCAGTGTGAGAACCGGCT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCAAGAGGAAGATGTTCTaGTTCAGGGACCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVLSLSEGLRTFSARLACKRKMF*FRDLSS
Trigger: GGAGCTCAGGTCCCTGAAGCAGAACATCTTCCTCTT...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTCTCAGCCCTGGGGGATaGGTAATCCCAGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFLSPGG*VIPVVA
Trigger: AGCAACGACTGGGATTACGCATCCCCCAGGGCTGAG...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATGCCAGGTTCCCTCTTaGTCTGCTCATAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPCQVPS*SAHRKG
Trigger: CCCTTTCCTATGAGCAGAGCAAGAGGGAACCTGGCA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCATTGTCTGGATGGTCTaGGTCCCTGCTGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFIVWMV*VPAVLD
Trigger: GTCCAGGACAGCAGGGACGCAGACCATCCAGACAAT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGAGCCATGGCTGGCTTaGTTCCTCTCCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITEPWLA*FLSSFK
Trigger: CTTAAAGGAGGAGAGGAAGCAAGCCAGCCATGGCTC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATCTCCCGCCCCAACTTaGCCATCTTTTTGCGCATCA +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPSPAPT*PSFCAS
Trigger: TGATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTTTGGACTGCAAGTCTaGGCCCAACTCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIFGLQV*AQLLSQ
Trigger: CTGGGAAAGGAGTTGGGCCCAGACTTGCAGTCCAAA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGCTGCTCTCTCAGTTTaGACTGCAAGTCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHAALSV*TASLGP
Trigger: TGGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTCCATCTGCTTCCCTTaGCGCCAGTGTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFSICFP*RQCFSS
Trigger: GCTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTGGTCAGCATCCTCCTaGTCTATCCCATCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIWSASS*SIPSVW
Trigger: CCAGACAGATGGGATAGACCAGGAGGATGCTGACCA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATGGTCAGCATCCTCCTaGTCTATCCCATCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPWSASS*SIPSVW
Trigger: CCAGACAGATGGGATAGACCAGGAGGATGCTGACCA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGGAAGGCTACAGCCTTaGTCAGCATCCTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHGRLQP*SASSWS
Trigger: AGACCAGGAGGATGCTGACCAAGGCTGTAGCCTTCC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGCCCTGAAGAGCTGCTaGTTTTCCACCACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGALKSC*FSTTCL
Trigger: CAAACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCTTCACAGGGCCACATaGACACAGGTCTGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHLHRAT*TQVWRS
Trigger: ACTCCTCCAGACCTGTGTCCATGTGGCCCTGTGAAG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCGACTCCTTCAGTTTaGAGAGCGGCCGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHPTPSV*RAAGLQ
Trigger: TTGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAACGTCCATCAGACGCTaGAACTCGGACATACAGGAC +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPTSIRR*NSDIQD
Trigger: GTCCTGTATGTCCGAGTTCCAGCGTCTGATGGACGT...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCGTCGGGAGACAAGGGTaGAGTGACATCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFVGRQG*SDILLA
Trigger: AGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGAC...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTCCTGCACCTTCTCAATaGCAGGGGCCACCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFPAPSQ*QGPPVY
Trigger: GTAGACAGGTGGCCCCTGCCATTGAGAAGGTGCAGG...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGTCCTGCTATTTGGCTaGTCAGCTTTTGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITVLLFG*SAFERG
Trigger: GCCCCTCTCAAAAGCTGACCAGCCAAATAGCAGGAC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
3UTR CAA 72 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTaGGCCTGCATCCTTTCAGATGACAGACACTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSAR*ACILSDDRHSR
Trigger: ACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCGGGAAGCTTCCTCTTTaGCAAACTGAAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFGKLPL*QTEADT
Trigger: AGTGTCAGCTTCAGTTTGTCAAAGAGGAAGCTTCCC...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCACCCTGACTCCTGGTaGGGCTCAAACTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHHPDSW*GSNLNL
Trigger: CAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTCCTCCATCTCTAGGTTaGAACAGCTCTGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFPPSLG*NSSGLP
Trigger: TGGGAGGCCAGAGCTGTTTCAACCTAGAGATGGAGG...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGAGAGGGGCTTTCTCTaGAGTTTGGGAGAACCGTAC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHERGFL*SLGEPY
Trigger: GTACGGTTCTCCCAAACTTCAGAGAAAGCCCCTCTC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATACTTTCAGGCTCTTCTaGTCGGCTTTCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHTFRLF*SAFLSR
Trigger: CCGACTCAGGAAAGCCGAGCAGAAGAGCCTGAAAGT...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGTACTTCTGCAGTTCCTaGTCCAACTCGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRYFCSS*SNSSFS
Trigger: GGAGAAGGACGAGTTGGAGCAGGAACTGCAGAAGTA...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTCTTCCTGCCCAAGATaGTGGCTTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFSSCPR*WLPPPP
Trigger: TGGTGGAGGAGGAAGCCAGCATCTTGGGCAGGAAGA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTGCTCCACGATCTTCCTaGCCAAGATGCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFAPRSS*PRCWLP
Trigger: AGGAAGCCAGCATCTTGGGCAGGAAGATCGTGGAGC...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTATGTCTTCCATCTCTaGTTTGAGGCCACGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQYVFHL*FEATVF
Trigger: GAAAACCGTGGCCTCAAAGCAGAGATGGAAGACATA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTAAGAGGAAGATGTTCTaGTTCAGGGACCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIKRKMF*FRDLSS
Trigger: GGAGCTCAGGTCCCTGAAGCAGAACATCTTCCTCTT...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCAAGAGGAAGATGTTCTaGTTCAGGGACCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGKRKMF*FRDLSS
Trigger: GGAGCTCAGGTCCCTGAAGCAGAACATCTTCCTCTT...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTACGTGCACACCAGACTaGTCAGTGAGGACATGGGTC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFTCTPD*SVRTWV
Trigger: GACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGT...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTATTGTCTGGATGGTCTaGGTCCCTGCTGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFIVWMV*VPAVLD
Trigger: GTCCAGGACAGCAGGGACGCAGACCATCCAGACAAT...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGAGCCATGGCTGGCTTaGTTCCTCTCCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHEPWLA*FLSSFK
Trigger: CTTAAAGGAGGAGAGGAAGCAAGCCAGCCATGGCTC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCATCCTTGCGCCTCGGTaGCAGCTTCCTTTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFILAPR*QLPLGF
Trigger: AAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGAT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGACGGTCTCGAGTTCGTaGTGTAATCTGACAGACACA +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMTVSSS*CNLTDT
Trigger: TGTGTCTGTCAGATTACACCACGAACTCGAGACCGT...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTCTCCCGCCCCAACTTaGCCATCTTTTTGCGCATCA +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSPAPT*PSFCAS
Trigger: TGATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTTTGGACTGCAAGTCTaGGCCCAACTCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFFGLQV*AQLLSQ
Trigger: CTGGGAAAGGAGTTGGGCCCAGACTTGCAGTCCAAA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTGGTCAGCATCCTCCTaGTCTATCCCATCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFWSASS*SIPSVW
Trigger: CCAGACAGATGGGATAGACCAGGAGGATGCTGACCA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTCCATCACCAGGCTGTaGCTGTCAGCCAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFSITRL*LSASSF
Trigger: GAAACTGCTGGCTGACAGCCACAGCCTGGTGATGGA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATACGTCCATCAGACGCTaGAACTCGGACATACAGGAC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHTSIRR*NSDIQD
Trigger: GTCCTGTATGTCCGAGTTCCAGCGTCTGATGGACGT...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGGGAAGCTTCCTCTTTaGCAAACTGAAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRGKLPL*QTEADT
Trigger: AGTGTCAGCTTCAGTTTGTCAAAGAGGAAGCTTCCC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCCAACAACTTTTTGTTaGGGATCCGGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGPTTFC*GSGPHS
Trigger: AGAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTGTACATTTCCCGACTaGCTCTTCTCTTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMCTFPD*LFSSEN
Trigger: GTTCTCTGAAGAGAAGAGGCAGTCGGGAAATGTACA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGTACATTTCCCGACTaGCTCTTCTCTTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFCTFPD*LFSSEN
Trigger: GTTCTCTGAAGAGAAGAGGCAGTCGGGAAATGTACA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR GCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTACTTCTGCAGTTCCTaGTCCAACTCGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFYFCSS*SNSSFS
Trigger: GGAGAAGGACGAGTTGGAGCAGGAACTGCAGAAGTA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTATGTCTTCCATCTCTaGTTTGAGGCCACGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFYVFHL*FEATVF
Trigger: GAAAACCGTGGCCTCAAAGCAGAGATGGAAGACATA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATAAGAGGAAGATGTTCTaGTTCAGGGACCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHKRKMF*FRDLSS
Trigger: GGAGCTCAGGTCCCTGAAGCAGAACATCTTCCTCTT...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTGAGCCATGGCTGGCTTaGTTCCTCTCCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFEPWLA*FLSSFK
Trigger: CTTAAAGGAGGAGAGGAAGCAAGCCAGCCATGGCTC...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCGCAGTCCTGAGTCGTaGATGAAACCATCTGTATCA +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIRSPES*MKPSVS
Trigger: TGATACAGATGGTTTCATCCACGACTCAGGACTGCG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTGCCCTGAAGAGCTGCTaGTTTTCCACCACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFALKSC*FSTTCL
Trigger: CAAACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGC...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGTTCGTGGTGTAATCTaGCAGACACATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIVRGVI*QTHLWL
Trigger: TAGCCAAAGATGTGTCTGTCAGATTACACCACGAAC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR TCA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGTTCGTGGTGTAATCTaGCAGACACATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITVRGVI*QTHLWL
Trigger: TAGCCAAAGATGTGTCTGTCAGATTACACCACGAAC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR TCA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCCCAACAACTTTTTGTTaGGGATCCGGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFPTTFC*GSGPHS
Trigger: AGAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGG...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTATGTCTTCCATCTCTaGTTTGAGGCCACGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIYVFHL*FEATVF
Trigger: GAAAACCGTGGCCTCAAAGCAGAGATGGAAGACATA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCTCCGCACTGTCATCCTaGTTAACAAGTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLSLSEGLRTFSARLACISALSS*LTSFFS
Trigger: AGAGAAGAAACTTGTTAACCAGGATGACAGTGCGGA...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCGCAGTCCTGAGTCGTaGATGAAACCATCTGTATCA +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHRSPES*MKPSVS
Trigger: TGATACAGATGGTTTCATCCACGACTCAGGACTGCG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGTTAGTAAGACAGTTTaGTTCTCCATGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRVSKTV*FSMDPG
Trigger: GCCAGGATCCATGGAGAACCAAACTGTCTTACTAAC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
CDS-3UTR CCA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCGTTAGTAAGACAGTTTaGTTCTCCATGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGVSKTV*FSMDPG
Trigger: GCCAGGATCCATGGAGAACCAAACTGTCTTACTAAC...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTCCACTCCACCATTCTaGTTAACAAGTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQSTPPF*LTSFFS
Trigger: AGAGAAGAAACTTGTTAACCAGAATGGTGGAGTGGA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR TCA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTCCAACAACTTTTTGTTaGGGATCCGGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: RQAELRTRVLGISSNVHFPTTFC*GSGPHS
Trigger: AGAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGG...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTATGTCTTCCATCTCTaGTTTGAGGCCACGGTTTTC +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHYVFHL*FEATVF
Trigger: GAAAACCGTGGCCTCAAAGCAGAGATGGAAGACATA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATCCGCACTGTCATCCTaGTTAACAAGTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPSALSS*LTSFFS
Trigger: AGAGAAGAAACTTGTTAACCAGGATGACAGTGCGGA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTCCTCCTTTAAGGCATaGTCCAACAACTTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FPLGWRLADGGDGLVMQISSFKA*SNNFLL
Trigger: CAACAAAAAGTTGTTGGAGCATGCCTTAAAGGAGGA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR GCA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATCCTCCTTTAAGGCATaGTCCAACAACTTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPSSFKA*SNNFLL
Trigger: CAACAAAAAGTTGTTGGAGCATGCCTTAAAGGAGGA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTCCCAGTCGTTGCTATaGAATTCTTCAATGTATTTC +
Preference number: 4 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFSQSLL*NSSMYF
Trigger: GAAATACATTGAAGAATTCCATAGCAACGACTGGGA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CCA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCATCCCAGTCGTTGCTATaGAATTCTTCAATGTATTTC +
Preference number: 4 (lower is better)
Translates to: SLSEGLRTFSARLACILSSQSLL*NSSMYF
Trigger: GAAATACATTGAAGAATTCCATAGCAACGACTGGGA...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR GCA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTCCTCCTTTAAGGCATaGTCCAACAACTTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSSFKA*SNNFLL
Trigger: CAACAAAAAGTTGTTGGAGCATGCCTTAAAGGAGGA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CCA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGTCCCAGTCGTTGCTATaGAATTCTTCAATGTATTTC +
Preference number: 4 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRSQSLL*NSSMYF
Trigger: GAAATACATTGAAGAATTCCATAGCAACGACTGGGA...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS CCA 90 bp CTCGGCCAGCGGGTGCAGGTGGTGGTGGCGGTGATGCTGGCCGGCTaGCTGCGGCTTGGTGTCCGGGGCGCCGCCGCCCGCGGGGCCGTT +
Preference number: 5 (lower is better)
Translates to: LGQRVQVVVAVMLAG*LRLGVRGAAARGAV
Trigger: AACGGCCCCGCGGGCGGCGGCGCCCCGGACACCAAGCCGCAGCCAGCCGGCCAGCATCACCGCCACCACCACCTGCACCCGCTGGCCGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CCA 90 bp GCTCGGGGCTGCCCGGCGGCGGCCCGCGGGATCCGGAGCTCGGAGTaGGTGCTCCGCGTATGGGTTCCCGGTCACTGGAGCCGGTGCCCG +
Preference number: 5 (lower is better)
Translates to: ARGCPAAARGIRSSE*VLRVWVPGHWSRCP
Trigger: CGGGCACCGGCTCCAGTGACCGGGAACCCATACGCGGAGCACCCACTCCGAGCTCCGGATCCCGCGGGCCGCCGCCGGGCAGCCCCGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 90 bp GGGCCGCGTGTGCAGGTCCTTGAGGAAGGGTCTGGCGGGCGAGGGTaGGCGGTGCAGCCGCCTCCTCTCGGCCAGCGGGTGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GPRVQVLEEGSGGRG*AVQPPPLGQRVQVV
Trigger: CACCACCTGCACCCGCTGGCCGAGAGGAGGCGGCTGCACCGCGCACCCTCGCCCGCCAGACCCTTCCTCAAGGACCTGCACACGCGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 90 bp GTGTGCAGGTCCTTGAGGAAGGGTCTGGCGGGCGAGGGTGCGCGGTaGAGCCGCCTCCTCTCGGCCAGCGGGTGCAGGTGGTGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: VCRSLRKGLAGEGAR*SRLLSASGCRWWWR
Trigger: CCGCCACCACCACCTGCACCCGCTGGCCGAGAGGAGGCGGCTGCACCGCGCACCCTCGCCCGCCAGACCCTTCCTCAAGGACCTGCACAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 90 bp CCTCCCAGCCCATGGTGGCTCCCGGAATCCCCATCCGCGCGCCGGTaGAGCTCCCGAGTGGCTCGGAGACGCAGGCCCTCTCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: PPSPWWLPESPSARR*SSRVARRRRPSRSS
Trigger: GGACGAGCGAGAGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACCGGCGCGCGGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp TCGGAGTGGGTGCTCCGCGTATGGGTTCCCGGTCACTGGAGCCGGTaGCCGACTCAGCGTCGCTGCTGGCGGCGGGGAGTAGGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: SEWVLRVWVPGHWSR*PTQRRCWRRGVGAA
Trigger: AGCAGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCATACGCGGAGCACCCACTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CCA 90 bp GGTGGCTCCCGGAATCCCCATCCGCGCGCCGGTGCAGCTCCCGAGTaGCTCGGAGACGCAGGCCCTCTCGCTCGTCCCCTCGATCCTGAT +
Preference number: 5 (lower is better)
Translates to: GGSRNPHPRAGAAPE*LGDAGPLARPLDPD
Trigger: ATCAGGATCGAGGGGACGAGCGAGAGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACCGGCGCGCGGATGGGGATTCCGGGAGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp ATCCGGAGCTCGGAGTGGGTGCTCCGCGTATGGGTTCCCGGTCACTaGAGCCGGTGCCCGACTCAGCGTCGCTGCTGGCGGCGGGGAGTA +
Preference number: 5 (lower is better)
Translates to: IRSSEWVLRVWVPGH*SRCPTQRRCWRRGV
Trigger: TACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCATACGCGGAGCACCCACTCCGAGCTCCGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS TCA 90 bp AGGAAAGGGGCCCTCGGGGTCCGCTCGGCTCCTGCCCTCGCCGCCTaGTGCTATACTGTCAACCCGGCGAATGGCAGGCGGGCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: RKGALGVRSAPALAA*CYTVNPANGRRAVQ
Trigger: CTGCACAGCCCGCCTGCCATTCGCCGGGTTGACAGTATAGCATCAGGCGGCGAGGGCAGGAGCCGAGCGGACCCCGAGGGCCCCTTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp CCGGTGCCCGACTCAGCGTCGCTGCTGGCGGCGGGGAGTAGGCGCTaGTCATCAGACAAGGGTTCGGAGGCGCAGTCGGAGAGATCCGAG +
Preference number: 5 (lower is better)
Translates to: PVPDSASLLAAGSRR*SSDKGSEAQSERSE
Trigger: CTCGGATCTCTCCGACTGCGCCTCCGAACCCTTGTCTGATGAGCAGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 90 bp GCCCACTCCACATCCCACGCAGCCTTGTCGCTGGCGTACTGCTGCTaGAGCCGCAGCCGCGCATGCTCGTCTTCGCGCAGCTCCGAACGG +
Preference number: 5 (lower is better)
Translates to: AHSTSHAALSLAYCC*SRSRACSSSRSSER
Trigger: CCGTTCGGAGCTGCGCGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGTGGGATGTGGAGTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp TGGGTTCCCGGTCACTGGAGCCGGTGCCCGACTCAGCGTCGCTGCTaGCGGCGGGGAGTAGGCGCTGCTCATCAGACAAGGGTTCGGAGG +
Preference number: 5 (lower is better)
Translates to: WVPGHWSRCPTQRRC*RRGVGAAHQTRVRR
Trigger: CCTCCGAACCCTTGTCTGATGAGCAGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 90 bp GTATGGGTTCCCGGTCACTGGAGCCGGTGCCCGACTCAGCGTCGCTaGTGGCGGCGGGGAGTAGGCGCTGCTCATCAGACAAGGGTTCGG +
Preference number: 5 (lower is better)
Translates to: VWVPGHWSRCPTQRR*WRRGVGAAHQTRVR
Trigger: CCGAACCCTTGTCTGATGAGCAGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCATAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 90 bp GCAGCCTTGTCGCTGGCGTACTGCTGCTGCAGCCGCAGCCGCGCATaGTCGTCTTCGCGCAGCTCCGAACGGAAGTCCTCCAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AALSLAYCCCSRSRA*SSSRSSERKSSSRA
Trigger: GGCTCTGCTGGAGGACTTCCGTTCGGAGCTGCGCGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp AGCACAGCCCACTCCACATCCCACGCAGCCTTGTCGCTGGCGTACTaGTGCTGCAGCCGCAGCCGCGCATGCTCGTCTTCGCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: STAHSTSHAALSLAY*CCSRSRACSSSRSS
Trigger: GGAGCTGCGCGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGTGGGATGTGGAGTGGGCTGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp CCCCTGAGCTCTAGGTTGAAACAGCTCTGGCCTCCCAGCCCATGGTaGCTCCCGGAATCCCCATCCGCGCGCCGGTGCAGCTCCCGAGTG +
Preference number: 5 (lower is better)
Translates to: PLSSRLKQLWPPSPW*LPESPSARRCSSRV
Trigger: CACTCGGGAGCTGCACCGGCGCGCGGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCAGAGCTGTTTCAACCTAGAGCTCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS CCA 90 bp GAGCCCCTGAGCTCTAGGTTGAAACAGCTCTGGCCTCCCAGCCCATaGTGGCTCCCGGAATCCCCATCCGCGCGCCGGTGCAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: EPLSSRLKQLWPPSP*WLPESPSARRCSSR
Trigger: TCGGGAGCTGCACCGGCGCGCGGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCAGAGCTGTTTCAACCTAGAGCTCAGGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS GCA 90 bp ACAGCCCACTCCACATCCCACGCAGCCTTGTCGCTGGCGTACTGCTaGTGCAGCCGCAGCCGCGCATGCTCGTCTTCGCGCAGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: TAHSTSHAALSLAYC*CSRSRACSSSRSSE
Trigger: TTCGGAGCTGCGCGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGTGGGATGTGGAGTGGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp CCTAGCGGGCTGGGCGACCTCCCTCTGGAACTGGTGCCCGTTTCCTaGCCTGGACCCAGCTCCTGTCGAGGTTCTGCTGACCGAGATCGG +
Preference number: 5 (lower is better)
Translates to: PSGLGDLPLELVPVS*PGPSSCRGSADRDR
Trigger: CCGATCTCGGTCAGCAGAACCTCGACAGGAGCTGGGTCCAGGCCAGGAAACGGGCACCAGTTCCAGAGGGAGGTCGCCCAGCCCGCTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp ACCCGGCGAATGGCAGGCGGGCTGTGCAGCACGTGCACACCAGACTaGTCAGTGAGGACATGGGTCCGCAGTGGCTGCTTCTGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: TRRMAGGLCSTCTPD*SVRTWVRSGCFWQC
Trigger: GCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCATTCGCCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp GAATGGCAGGCGGGCTGTGCAGCACGTGCACACCAGACTGCTCAGTaGGGACATGGGTCCGCAGTGGCTGCTTCTGGCAGTGCTCCGGAC +
Preference number: 5 (lower is better)
Translates to: EWQAGCAARAHQTAQ*GHGSAVAASGSAPD
Trigger: GTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp CAGATAAGTCCTGTCTCACTGGCGTGCTCTCTCCTCCCTCCTCCCTaGACGTCTCGGAGCCTACCCCTAGCGGGCTGGGCGACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: QISPVSLACSLLPPP*TSRSLPLAGWATSL
Trigger: GAGGGAGGTCGCCCAGCCCGCTAGGGGTAGGCTCCGAGACGTTCAGGGAGGAGGGAGGAGAGAGCACGCCAGTGAGACAGGACTTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp GGCGGGCTGTGCAGCACGTGCACACCAGACTGCTCAGTGAGGACATaGGTCCGCAGTGGCTGCTTCTGGCAGTGCTCCGGACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: GGLCSTCTPDCSVRT*VRSGCFWQCSGLVM
Trigger: CATGACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGGCTCACTCGGGCTGTaGCCCTCACCTCCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCGSLGL*PSPPPP
Trigger: AGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGCC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS GCA 90 bp GCTATACTGTCAACCCGGCGAATGGCAGGCGGGCTGTGCAGCACGTaGACACCAGACTGCTCAGTGAGGACATGGGTCCGCAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: AILSTRRMAGGLCST*TPDCSVRTWVRSGC
Trigger: GCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCATTCGCCGGGTTGACAGTATAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp CCGCCTGATGCTATACTGTCAACCCGGCGAATGGCAGGCGGGCTGTaGAGCACGTGCACACCAGACTGCTCAGTGAGGACATGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: PPDAILSTRRMAGGL*STCTPDCSVRTWVR
Trigger: GCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCATTCGCCGGGTTGACAGTATAGCATCAGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp ATTGTCTGGATGGTCTGCGTCCCTGCTGTCCTGGACCCATTGGTCTaGCAGGCCATATCCCTGACGTGTGGCTCGGCAGGACCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: IVWMVCVPAVLDPLV*QAISLTCGSAGPAQ
Trigger: CTGCGCCGGTCCTGCCGAGCCACACGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGCAGACCATCCAGACAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp AACGCTGGCCGCGGGGCCCTTAGACACACCGTCCCCAAGCCACCCTaGCTCCTGGTGAGGCTCAAACTTGAACTTGCTCAGCTCGTGGGT +
Preference number: 5 (lower is better)
Translates to: NAGRGALRHTVPKPP*LLVRLKLELAQLVG
Trigger: ACCCACGAGCTGAGCAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTGGCTTGGGGACGGTGTGTCTAAGGGCCCCGCGGCCAGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTGGAGTGACATCCTCCTaGCTGCCGGCGGAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCGVTSS*LPAEGS
Trigger: GCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCC...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS TCA 90 bp CGAGTGGCTCGGAGACGCAGGCCCTCTCGCTCGTCCCCTCGATCCTaGTTGAGCTGCCATTCCAGCTGCTCTCTCAGTTTGGACTGCAAG +
Preference number: 5 (lower is better)
Translates to: RVARRRRPSRSSPRS*LSCHSSCSLSLDCK
Trigger: CTTGCAGTCCAAACTGAGAGAGCAGCTGGAATGGCAGCTCAATCAGGATCGAGGGGACGAGCGAGAGGGCCTGCGTCTCCGAGCCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp CAGCACGTGCACACCAGACTGCTCAGTGAGGACATGGGTCCGCAGTaGCTGCTTCTGGCAGTGCTCCGGACTGGTCATGGTGTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: QHVHTRLLSEDMGPQ*LLLAVLRTGHGVCR
Trigger: ACGACAGACACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp AGTTCCTCCATGGATCCTGGCTCGGCTGGCACTGGTTCTCCAGTGTaGCTGTCGCTGGTGAGACCTGAGGAGCCATGGCTGGCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SSSMDPGSAGTGSPV*LSLVRPEEPWLACF
Trigger: GAAGCAAGCCAGCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACACTGGAGAACCAGTGCCAGCCGAGCCAGGATCCATGGAGGAACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCCACCAGCCTCCCCTGTaGGGAGGGGACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: QACILSQVWLLLWWVLLTHQPPL*GGDCPH
Trigger: ATGTGGACAGTCCCCTCCCAACAGGGGAGGCTGGTG...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS TCA 90 bp CCATCTGTATCAGAGATGAGGCGCTCCACAGTCCGCTCAAGCCGCTaGGCCTCCAGCTTTATGGTCACCAGGCACTCGGTATCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PSVSEMRRSTVRSSR*ASSFMVTRHSVSSR
Trigger: CCGGGAGGATACCGAGTGCCTGGTGACCATAAAGCTGGAGGCTCAGCGGCTTGAGCGGACTGTGGAGCGCCTCATCTCTGATACAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp TGGCTCGGAGACGCAGGCCCTCTCGCTCGTCCCCTCGATCCTGATTaGGCTGCCATTCCAGCTGCTCTCTCAGTTTGGACTGCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: WLGDAGPLARPLDPD*AAIPAALSVWTASL
Trigger: CAGACTTGCAGTCCAAACTGAGAGAGCAGCTGGAATGGCAGCTCAATCAGGATCGAGGGGACGAGCGAGAGGGCCTGCGTCTCCGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp ATCCTGGCTCGGCTGGCACTGGTTCTCCAGTGTGGCTGTCGCTGGTaGGACCTGAGGAGCCATGGCTGGCTTGCTTCCTCTCCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ILARLALVLQCGCRW*DLRSHGWLASSPPL
Trigger: TAAAGGAGGAGAGGAAGCAAGCCAGCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACACTGGAGAACCAGTGCCAGCCGAGCCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp ACGTGCACACCAGACTGCTCAGTGAGGACATGGGTCCGCAGTGGCTaGTTCTGGCAGTGCTCCGGACTGGTCATGGTGTCTGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: TCTPDCSVRTWVRSG*FWQCSGLVMVSVVI
Trigger: GATGACGACAGACACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp CGGTCCTGTCTGCCCAGGGGTCTGGAGGCCGATCGGCCTCAGCCCTaGGGGATGCGTAATCCCAGTCGTTGCTATGGAATTCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: RSCLPRGLEADRPQP*GMRNPSRCYGILQC
Trigger: ACATTGAAGAATTCCATAGCAACGACTGGGATTACGCATCCCCCAGGGCTGAGGCCGATCGGCCTCCAGACCCCTGGGCAGACAGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp TGCTGTCCTGGACCCATTGGTCTGGCAGGCCATATCCCTGACGTGTaGCTCGGCAGGACCGGCGCAGATGGCATTCCTGACAGAAAAAGC +
Preference number: 5 (lower is better)
Translates to: CCPGPIGLAGHIPDV*LGRTGADGIPDRKS
Trigger: GCTTTTTCTGTCAGGAATGCCATCTGCGCCGGTCCTGCCGAGCCACACGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAGGACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp CCGCACTGTCATCCTTGCGCCTCGGTGCCAGCTTCCTTTGGGTTTTaGTGGCCGACCTGCAGTTCCCAGGACGTTCCACTCCACCATTCT +
Preference number: 5 (lower is better)
Translates to: PHCHPCASVPASFGF*WPTCSSQDVPLHHS
Trigger: AGAATGGTGGAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGACAGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGGGCCGCGCTTGGTTTaGCGACCCTTCGCGACGGCA +
Preference number: 5 (lower is better)
Translates to: SELFRRSSTQACILSQVWGPRLV*RPFATA
Trigger: TGCCGTCGCGAAGGGTCGCAAAACCAAGCGCGGCCC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097291.10
CDS-3UTR CAA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCCCGTGGAGGACTCCATaGAGTCTCCGAAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: QACILSQVWLLLWWVLLTPWRTP*SLRRVR
Trigger: CCTCACCCTTCGGAGACTCAATGGAGTCCTCCACGG...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTAGCTGCTCTCTCAGTTaGGACTGCAAGTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCSCSLS*DCKSGP
Trigger: GGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGCT...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGGAGTGAAGGCTTCCTaGGTGCGGGTAAGGGCGTGT +
Preference number: 5 (lower is better)
Translates to: QACILSQVWLLLWWVLLTGVKAS*VRVRAC
Trigger: ACACGCCCTTACCCGCACCAAGGAAGCCTTCACTCC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTCCGACTCCTTCAGTTaGGAGAGCGGCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCSDSFS*ESGRSS
Trigger: TGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGGA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCGCTGTCCTGGACCCATaGGTCTGGCAGGCCATATCC +
Preference number: 5 (lower is better)
Translates to: QACILSQVWLLLWWVLLTAVLDP*VWQAIS
Trigger: GGATATGGCCTGCCAGACCAATGGGTCCAGGACAGC...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCCCCCTGAGCTCTAGGTaGAAACAGCTCTGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: QACILSQVWLLLWWVLLTPLSSR*KQLWPP
Trigger: GGGAGGCCAGAGCTGTTTCAACCTAGAGCTCAGGGG...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS TCA 90 bp AGCTCCTGCTGCAGCAGATTCTTCTCGTCGCTCCACGTCCGCTTGTaGAGGGTGTTCTGCAGGGCCAGGCTGTGCATCTCCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSCCSRFFSSLHVRL*RVFCRARLCISSSF
Trigger: GAAGGAACTGGAGATGCACAGCCTGGCCCTGCAGAACACCCTTCACAAGCGGACGTGGAGCGACGAGAAGAATCTGCTGCAGCAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp TCAGAGATGGATCTCCTCAGCAGCTCAGCCTCTTCTTCCACAAACTaGAGGTGCCGGCGGAGCTCCGTGGAGGACTCCATTGAGTCTCCG +
Preference number: 5 (lower is better)
Translates to: SEMDLLSSSASSSTN*RCRRSSVEDSIESP
Trigger: CGGAGACTCAATGGAGTCCTCCACGGAGCTCCGCCGGCACCTGCAGTTTGTGGAAGAAGAGGCTGAGCTGCTGAGGAGATCCATCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp GCGGGTAAGGGCGTGTGTCGTCTTCCCTTCGGCTGCAGAGGAAACTaGCGCTTCTCCGGGGACTTTTCTCTTTCTGTAACTGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: AGKGVCRLPFGCRGN*RFSGDFSLSVTAPP
Trigger: GGGTGGAGCAGTTACAGAAAGAGAAAAGTCCCCGGAGAAGCGGCAGTTTCCTCTGCAGCCGAAGGGAAGACGACACACGCCCTTACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 90 bp GACTGCTCAGTGAGGACATGGGTCCGCAGTGGCTGCTTCTGGCAGTaGTCCGGACTGGTCATGGTGTCTGTCGTCATCGTGACACTTGTG +
Preference number: 5 (lower is better)
Translates to: DCSVRTWVRSGCFWQ*SGLVMVSVVIVTLV
Trigger: CACAAGTGTCACGATGACGACAGACACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp GTGAACCCCCTGGACTCCAAGCTCAGCAAGCCCAGGCACATTCTCTaGATGTTCGCTCTCCTCCAGATCCTCTCCTCCCTCCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: VNPLDSKLSKPRHIL*MFALLQILSSLLHL
Trigger: CAGATGGAGGAGGGAGGAGAGGATCTGGAGGAGAGCGAACATCCAGAGAATGTGCCTGGGCTTGCTGAGCTTGGAGTCCAGGGGGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp GCCGGTCTTCAAATGGGATGGAGTCGGCGTCTTCACAGGGCCACATaGACACAGGTCTGGAGGAGTGAAGGCTTCCTTGGTGCGGGTAAG +
Preference number: 5 (lower is better)
Translates to: AGLQMGWSRRLHRAT*TQVWRSEGFLGAGK
Trigger: CTTACCCGCACCAAGGAAGCCTTCACTCCTCCAGACCTGTGTCCATGTGGCCCTGTGAAGACGCCGACTCCATCCCATTTGAAGACCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp ACACCAGACTGCTCAGTGAGGACATGGGTCCGCAGTGGCTGCTTCTaGCAGTGCTCCGGACTGGTCATGGTGTCTGTCGTCATCGTGACA +
Preference number: 5 (lower is better)
Translates to: TPDCSVRTWVRSGCF*QCSGLVMVSVVIVT
Trigger: TGTCACGATGACGACAGACACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp CACTGTCATCCTTGCGCCTCGGTGCCAGCTTCCTTTGGGTTTTGGTaGCCGACCTGCAGTTCCCAGGACGTTCCACTCCACCATTCTGGT +
Preference number: 5 (lower is better)
Translates to: HCHPCASVPASFGFW*PTCSSQDVPLHHSG
Trigger: ACCAGAATGGTGGAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGCGCGTGTGCAGGTCCTaGAGGAAGGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQRVCRS*RKGLAG
Trigger: GCCCGCCAGACCCTTCCTCAAGGACCTGCACACGCG...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CAA 90 bp GGCTTCTCCTCTGGTGGGTCCTCCTCACCGTGTTCCTCCATGGACATCGGGTGTTTCTCCCGCCCCAACTaGGCCATCTTTTTGCGCATC +
Preference number: 5 (lower is better)
Translates to: GFSSGGSSSPCSSMDIGCFSRPN*AIFLRI
Trigger: GATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGAA...ACACCCGATGTCCATGGAGGAACACGGTGAGGAGGACCCACCAGAGGAGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTTCTTCAAGGCCCCTTaGCCCTCAGCAGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: QACILSQVWLLLWWVLLTFFKAP*PSAEES
Trigger: GGACTCCTCTGCTGAGGGCAAAGGGGCCTTGAAGAA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS TCA 90 bp GGAGTGCTTGGCACGTGGTCCCTGCCTGTTCCCTCGCGTTCATGCTaGACCCGTATGTCTTCCATCTCTGCTTTGAGGCCACGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GVLGTWSLPVPSRSC*TRMSSISALRPRFS
Trigger: GGAAAACCGTGGCCTCAAAGCAGAGATGGAAGACATACGGGTTCAGCATGAACGCGAGGGAACAGGCAGGGACCACGTGCCAAGCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp GCTTCTGGCAGTGCTCCGGACTGGTCATGGTGTCTGTCGTCATCGTaGCACTTGTGGTCAGATACCAGGAGGGATCCGGACAAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ASGSAPDWSWCLSSS*HLWSDTRRDPDKAL
Trigger: CAGAGCCTTGTCCGGATCCCTCCTGGTATCTGACCACAAGTGTCACGATGACGACAGACACCATGACCAGTCCGGAGCACTGCCAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp TGGACTCCAGGTGAGGCCAATCCATTGCCCCGCAGTCCTGAGTCGTaGATGAAACCATCTGTATCAGAGATGAGGCGCTCCACAGTCCGC +
Preference number: 5 (lower is better)
Translates to: WTPGEANPLPRSPES*MKPSVSEMRRSTVR
Trigger: GCGGACTGTGGAGCGCCTCATCTCTGATACAGATGGTTTCATCCACGACTCAGGACTGCGGGGCAATGGATTGGCCTCACCTGGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp CTGGATCATCATCCAGGGACAAAGCGTCCAAGTACAGGTTCTCACTaGCCGAGCACCTGTCCGACTCCTTCAGTTTGGAGAGCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: LDHHPGTKRPSTGSH*PSTCPTPSVWRAAG
Trigger: ACCGGCCGCTCTCCAAACTGAAGGAGTCGGACAGGTGCTCGGCCAGTGAGAACCTGTACTTGGACGCTTTGTCCCTGGATGATGATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp GCCCTTGCGACTTTCTTCTTCCTCGGCAAGGCAGTTCCTGAGGGGTaGCGGATCCCCTGGATCATCATCCAGGGACAAAGCGTCCAAGTA +
Preference number: 5 (lower is better)
Translates to: ALATFFFLGKAVPEG*RIPWIIIQGQSVQV
Trigger: TACTTGGACGCTTTGTCCCTGGATGATGATCCAGGGGATCCGCCACCCCTCAGGAACTGCCTTGCCGAGGAAGAAGAAAGTCGCAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS CCA 90 bp TTCAAATCCGCACTGTCATCCTTGCGCCTCGGTGCCAGCTTCCTTTaGGTTTTGGTGGCCGACCTGCAGTTCCCAGGACGTTCCACTCCA +
Preference number: 5 (lower is better)
Translates to: FKSALSSLRLGASFL*VLVADLQFPGRSTP
Trigger: TGGAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGACAGTGCGGATTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGGCTCACTCGGGCTGTaGCCCTCACCTCCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: RVLSLSEGLRTFSARLACGSLGL*PSPPPP
Trigger: AGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGCC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS GCA 90 bp TCCGCCACTTTCAGGCTCTTCTGCTCGGCTTTCCTGAGTCGGTACTaGAGGATTCTGCAGTTCTTGTTAGCACGGTCCAGCTCTCTCCGG +
Preference number: 5 (lower is better)
Translates to: SATFRLFCSAFLSRY*RILQFLLARSSSLR
Trigger: CCGGAGAGAGCTGGACCGTGCTAACAAGAACTGCAGAATCCTGCAGTACCGACTCAGGAAAGCCGAGCAGAAGAGCCTGAAAGTGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGGGCCGCGCTTGGTTTaGCGACCCTTCGCGACGGCA +
Preference number: 5 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRGPRLV*RPFATA
Trigger: TGCCGTCGCGAAGGGTCGCAAAACCAAGCGCGGCCC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CAA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGGCTCACTCGGGCTGTaGCCCTCACCTCCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIGSLGL*PSPPPP
Trigger: AGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGCC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGGCTCACTCGGGCTGTaGCCCTCACCTCCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPGSLGL*PSPPPP
Trigger: AGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGCC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp ACACACCGTCCCCAAGCCACCCTGACTCCTGGTGAGGCTCAAACTTaGACTTGCTCAGCTCGTGGGTCAACTGCCGGTTGTGATCTTCAA +
Preference number: 5 (lower is better)
Translates to: THRPQATLTPGEAQT*TCSARGSTAGCDLQ
Trigger: TTGAAGATCACAACCGGCAGTTGACCCACGAGCTGAGCAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTGGCTTGGGGACGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACCCATCGCTCTCTTTCTaGCCCGCGTCACTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SEGLRTFSARLACILSDDPSLSF*PASLSA
Trigger: TGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATGG...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGGTGAGGCCAATCCATaGCCCCGCAGTCCTGAGTCG +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMGEANP*PRSPES
Trigger: CGACTCAGGACTGCGGGGCAATGGATTGGCCTCACC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCCTCCATCTGCTTCCCTaGGCGCCAGTGTTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: PASFQMTDTLVFWPHGLILHLLP*APVFQQ
Trigger: CTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGAG...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGGAGTGACATCCTCCTaGCTGCCGGCGGAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: RVLSLSEGLRTFSARLACGVTSS*LPAEGS
Trigger: GCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGGCTGTCCTGGACCCATaGGTCTGGCAGGCCATATCC +
Preference number: 5 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQAVLDP*VWQAIS
Trigger: GGATATGGCCTGCCAGACCAATGGGTCCAGGACAGC...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp CAAGCTTGCATCCTGTCACAGGTGTGGCTTCTCCTCTGGTGGGTCCTCCTCACCTGCTCCAACAACTTTTaGTTGAGGATCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: QACILSQVWLLLWWVLLTCSNNF*LRIRAT
Trigger: TGTGGCCCGGATCCTCAACAAAAAGTTGTTGGAGCA...GGTGAGGAGGACCCACCAGAGGAGAAGCCACACCTGTGACAGGATGCAAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS TCA 90 bp GGAATTCTTCAATGTATTTCAAGTCGTCGGGAGACAAGGGTGGAGTaGCATCCTCCTTGCTGCCGGCGGAAGGTAGCCCCTTCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: GILQCISSRRETRVE*HPPCCRRKVAPSQA
Trigger: TGCCTGAGAAGGGGCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGACGACTTGAAATACATTGAAGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp ATCAGACGCTGGAACTCGGACATACAGGACACAGACACAGCCCTCTaGAGATTGCCCTTGCGACTTTCTTCTTCCTCGGGGGACAAACCC +
Preference number: 5 (lower is better)
Translates to: IRRWNSDIQDTDTAL*RLPLRLSSSSGDKP
Trigger: GGGTTTGTCCCCCGAGGAAGAAGAAAGTCGCAAGGGCAATCTTCAGAGGGCTGTGTCTGTGTCCTGTATGTCCGAGTTCCAGCGTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTCGCGTGTGCAGGTCCTaGAGGAAGGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RQAELRTRVLGISSNVHFRVCRS*RKGLAG
Trigger: GCCCGCCAGACCCTTCCTCAAGGACCTGCACACGCG...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS-3UTR CAA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCTTCTCCCGCCCCAACTaGGCCATCTTTTTGCGCATC +
Preference number: 5 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIFSRPN*AIFLRI
Trigger: GATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGAA...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCACCAGCCTCCCCTGTaGGGAGGGGACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIHQPPL*GGDCPH
Trigger: ATGTGGACAGTCCCCTCCCAACAGGGGAGGCTGGTG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCCATCGCTCTCTTTCTaGCCCGCGTCACTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: VLSLSEGLRTFSARLACIPSLSF*PASLSA
Trigger: TGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATGG...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGGTGAGGCCAATCCATaGCCCCGCAGTCCTGAGTCG +
Preference number: 5 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRGEANP*PRSPES
Trigger: CGACTCAGGACTGCGGGGCAATGGATTGGCCTCACC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTTCTTCAAGGCCCCTTaGCCCTCAGCAGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQFFKAP*PSAEES
Trigger: GGACTCCTCTGCTGAGGGCAAAGGGGCCTTGAAGAA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGGAGTGAAGGCTTCCTaGGTGCGGGTAAGGGCGTGT +
Preference number: 5 (lower is better)
Translates to: VLSLSEGLRTFSARLACIGVKAS*VRVRAC
Trigger: ACACGCCCTTACCCGCACCAAGGAAGCCTTCACTCC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp CCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAACAGGGGAGTGACATCCTCCTaGCTGCCGGCGGAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: PNSTWRNPTRTEQCKFNRGVTSS*LPAEGS
Trigger: GCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCC...CCTGTTGAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCGCTGTCCTGGACCCATaGGTCTGGCAGGCCATATCC +
Preference number: 5 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFAVLDP*VWQAIS
Trigger: GGATATGGCCTGCCAGACCAATGGGTCCAGGACAGC...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTATGGAAGGCGGCGGTTaGCTGGTCTCTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIMEGGG*LVSLAW
Trigger: CCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCAT...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCGGTGCCAGCTTCCTTaGGGTTTTGGTGGCCGACCT +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMRCQLP*GFGGRP
Trigger: AGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS TCA 90 bp ATCAGACGCTGGAACTCGGACATACAGGACACAGACACAGCCCTCTaGAGATTGCCCTTGCGACTTTCTTCTTCCTCGGCAAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IRRWNSDIQDTDTAL*RLPLRLSSSSARQF
Trigger: GAACTGCCTTGCCGAGGAAGAAGAAAGTCGCAAGGGCAATCTTCAGAGGGCTGTGTCTGTGTCCTGTATGTCCGAGTTCCAGCGTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS CCA 90 bp TCGTCTTCAGCCTTAGCGCGCTTCTCCTCCACGGTCTCGAGTTCGTaGTGTAATCTGACAGACACATCTTTGGCTACCTTCAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSSALARFSSTVSSS*CNLTDTSLATFKSC
Trigger: GCAGGACTTGAAGGTAGCCAAAGATGTGTCTGTCAGATTACACCACGAACTCGAGACCGTGGAGGAGAAGCGCGCTAAGGCTGAAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCACCAGCCTCCCCTGTaGGGAGGGGACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHHQPPL*GGDCPH
Trigger: ATGTGGACAGTCCCCTCCCAACAGGGGAGGCTGGTG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCCCGTGGAGGACTCCATaGAGTCTCCGAAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGPWRTP*SLRRVR
Trigger: CCTCACCCTTCGGAGACTCAATGGAGTCCTCCACGG...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACACCGTGGAGGACTCCATaGAGTCTCCGAAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITPWRTP*SLRRVR
Trigger: CCTCACCCTTCGGAGACTCAATGGAGTCCTCCACGG...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTCCATCGCTCTCTTTCTaGCCCGCGTCACTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIPSLSF*PASLSA
Trigger: TGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATGG...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCGGTGAGGCCAATCCATaGCCCCGCAGTCCTGAGTCG +
Preference number: 5 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFGEANP*PRSPES
Trigger: CGACTCAGGACTGCGGGGCAATGGATTGGCCTCACC...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCAGCTGCTCTCTCAGTTaGGACTGCAAGTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RVLSLSEGLRTFSARLACSCSLS*DCKSGP
Trigger: GGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGCT...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCTCCATCTGCTTCCCTaGGCGCCAGTGTTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMLHLLP*APVFQQ
Trigger: CTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGAG...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATGTTCCAGGCGGCACTaGAGCACAGCCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPCSRRH*STAHST
Trigger: TGTGGAGTGGGCTGTGCTCAAGTGCCGCCTGGAACA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTTCTTCAAGGCCCCTTaGCCCTCAGCAGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: RVLSLSEGLRTFSARLACFFKAP*PSAEES
Trigger: GGACTCCTCTGCTGAGGGCAAAGGGGCCTTGAAGAA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGGAGTGAAGGCTTCCTaGGTGCGGGTAAGGGCGTGT +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPGVKAS*VRVRAC
Trigger: ACACGCCCTTACCCGCACCAAGGAAGCCTTCACTCC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTCCGACTCCTTCAGTTaGGAGAGCGGCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFSDSFS*ESGRSS
Trigger: TGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGGA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGGAGTGACATCCTCCTaGCTGCCGGCGGAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHGVTSS*LPAEGS
Trigger: GCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTGCTGTCCTGGACCCATaGGTCTGGCAGGCCATATCC +
Preference number: 5 (lower is better)
Translates to: FPLGWRLADGGDGLVMQIAVLDP*VWQAIS
Trigger: GGATATGGCCTGCCAGACCAATGGGTCCAGGACAGC...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 90 bp GGCTCAAACTTGAACTTGCTCAGCTCGTGGGTCAACTGCCGGTTGTaGTCTTCAATCTCAGAGATGGATCTCCTCAGCAGCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GSNLNLLSSWVNCRL*SSISEMDLLSSSAS
Trigger: AGAGGCTGAGCTGCTGAGGAGATCCATCTCTGAGATTGAAGATCACAACCGGCAGTTGACCCACGAGCTGAGCAAGTTCAAGTTTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 90 bp TACGGATCTTGTTTGTGTATGTCTCTGTCTCCTCTTGATGGAGTCTaGCCGCCTGCTCGAGCTGACCCTGTAGCTCTTCTACAGACACAC +
Preference number: 5 (lower is better)
Translates to: YGSCLCMSLSPLDGV*PPARADPVALLQTH
Trigger: GTGTGTCTGTAGAAGAGCTACAGGGTCAGCTCGAGCAGGCGGCCAGACTCCATCAAGAGGAGACAGAGACATACACAAACAAGATCCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCAACTTGGCCATCTTTTaGCGCATCAGGGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PASFQMTDTLVFWPHGLINLAIF*RIREAS
Trigger: GGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTT...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTTCTCCCGCCCCAACTaGGCCATCTTTTTGCGCATC +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMFSRPN*AIFLRI
Trigger: GATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGAA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCTTCTCCCGCCCCAACTaGGCCATCTTTTTGCGCATC +
Preference number: 5 (lower is better)
Translates to: RVLSLSEGLRTFSARLACFSRPN*AIFLRI
Trigger: GATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGAA...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGTCTTCCATCTCTGCTTaGAGGCCACGGTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: VYLKGSVPFQQGWPASFQSSISA*RPRFST
Trigger: GGTGGAAAACCGTGGCCTCAAAGCAGAGATGGAAGA...CTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACTCTTCCATCTCTGCTTaGAGGCCACGGTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: SEGLRTFSARLACILSDDSSISA*RPRFST
Trigger: GGTGGAAAACCGTGGCCTCAAAGCAGAGATGGAAGA...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCGTGGAGGACTCCATaGAGTCTCCGAAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHPWRTP*SLRRVR
Trigger: CCTCACCCTTCGGAGACTCAATGGAGTCCTCCACGG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp TCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACGGCTCAAACTTGAACTaGCTCAGCTCGTGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: SEGLRTFSARLACILSDDGSNLN*LSSWVN
Trigger: GTTGACCCACGAGCTGAGCAAGTTCAAGTTTGAGCC...GTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATCGCTCTCTTTCTaGCCCGCGTCACTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHPSLSF*PASLSA
Trigger: TGCCGAGAGTGACGCGGGCAAGAAAGAGAGCGATGG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTGGTGAGGCCAATCCATaGCCCCGCAGTCCTGAGTCG +
Preference number: 5 (lower is better)
Translates to: RQAELRTRVLGISSNVHFGEANP*PRSPES
Trigger: CGACTCAGGACTGCGGGGCAATGGATTGGCCTCACC...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGGCCTTCATCCTCACATaGATGGTCTCCAACAAGTGG +
Preference number: 5 (lower is better)
Translates to: SELFRRSSTQACILSQVWAFILT*MVSNKW
Trigger: CCACTTGTTGGAGACCATCAATGTGAGGATGAAGGC...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTGTTCCAGGCGGCACTaGAGCACAGCCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHCSRRH*STAHST
Trigger: TGTGGAGTGGGCTGTGCTCAAGTGCCGCCTGGAACA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATTCTTCAAGGCCCCTTaGCCCTCAGCAGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPFFKAP*PSAEES
Trigger: GGACTCCTCTGCTGAGGGCAAAGGGGCCTTGAAGAA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATCCGACTCCTTCAGTTaGGAGAGCGGCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPSDSFS*ESGRSS
Trigger: TGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGGA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCGTGAGGTCCTGCTATTaGGCTGGTCAGCTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: PASFQMTDTLVFWPHGLIVRSCY*AGQLLR
Trigger: TCTCAAAAGCTGACCAGCCAAATAGCAGGACCTCAC...GATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTATGGAAGGCGGCGGTTaGCTGGTCTCTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RQAELRTRVLGISSNVHFMEGGG*LVSLAW
Trigger: CCAGGCCAGAGAGACCAGCAAACCGCCGCCTTCCAT...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCAGCTTCCTTTGGGTTTaGGTGGCCGACCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFSFLWV*VADLQF
Trigger: GAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCT...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp CCTTTTCAGCAAGGTTGGCCTGCATCCTTTCAGATGACAGACACTCTCGTCTTCTCTTCCATCTCTGCTTaGAGGCCACGGTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: PFQQGWPASFQMTDTLVFSSISA*RPRFST
Trigger: GGTGGAAAACCGTGGCCTCAAAGCAGAGATGGAAGA...GAAGACGAGAGTGTCTGTCATCTGAAAGGATGCAGGCCAACCTTGCTGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCGGCTCAAACTTGAACTaGCTCAGCTCGTGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: VLSLSEGLRTFSARLACIGSNLN*LSSWVN
Trigger: GTTGACCCACGAGCTGAGCAAGTTCAAGTTTGAGCC...GATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATAGCTGCTCTCTCAGTTaGGACTGCAAGTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSCSLS*DCKSGP
Trigger: GGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGCT...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCAGCTGCTCTCTCAGTTaGGACTGCAAGTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFSCSLS*DCKSGP
Trigger: GGGCCCAGACTTGCAGTCCAAACTGAGAGAGCAGCT...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCCTCCATCTGCTTCCCTaGGCGCCAGTGTTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFLHLLP*APVFQQ
Trigger: CTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGAG...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCTCCATCTGCTTCCCTaGGCGCCAGTGTTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHLHLLP*APVFQQ
Trigger: CTGCTGAAACACTGGCGCCAAGGGAAGCAGATGGAG...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTGTTCCAGGCGGCACTaGAGCACAGCCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: RQAELRTRVLGISSNVHFCSRRH*STAHST
Trigger: TGTGGAGTGGGCTGTGCTCAAGTGCCGCCTGGAACA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTCCGACTCCTTCAGTTaGGAGAGCGGCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHSDSFS*ESGRSS
Trigger: TGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGGA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGTGAACTATTCCGGCGATCATCCACGCAAGCTTGCATCCTGTCACAGGTGTGGTCCAACAACTTTTTGTaGAGGATCCGGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: SELFRRSSTQACILSQVWSNNFL*RIRATF
Trigger: GAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGGA...CCACACCTGTGACAGGATGCAAGCTTGCGTGGATGATCGCCGGAATAGTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS TCA 90 bp GCCCCAACTTGGCCATCTTTTTGCGCATCAGGGAAGCTTCCTCTTTaGCAAACTGAAGCTGACACTTCAAATCCGCACTGTCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: APTWPSFCASGKLPL*QTEADTSNPHCHPG
Trigger: ACCAGGATGACAGTGCGGATTTGAAGTGTCAGCTTCAGTTTGTCAAAGAGGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTTGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS TCA 90 bp GCCCCAACTTGGCCATCTTTTTGCGCATCAGGGAAGCTTCCTCTTTaGCAAACTGAAGCTGACACTTCAAATCCGCACTGTCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: APTWPSFCASGKLPL*QTEADTSNPHCHPC
Trigger: GCAAGGATGACAGTGCGGATTTGAAGTGTCAGCTTCAGTTTGTCAAAGAGGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTTGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCAACTTGGCCATCTTTTaGCGCATCAGGGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: RVLSLSEGLRTFSARLACNLAIF*RIREAS
Trigger: GGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTT...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGAACTTGGCCATCTTTTaGCGCATCAGGGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMNLAIF*RIREAS
Trigger: GGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTT...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATCTTCCATCTCTGCTTaGAGGCCACGGTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPSSISA*RPRFST
Trigger: GGTGGAAAACCGTGGCCTCAAAGCAGAGATGGAAGA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAGGCTCAAACTTGAACTaGCTCAGCTCGTGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITGSNLN*LSSWVN
Trigger: GTTGACCCACGAGCTGAGCAAGTTCAAGTTTGAGCC...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AGAGTCTTAAGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCGCCTTCATCCTCACATaGATGGTCTCCAACAAGTGG +
Preference number: 5 (lower is better)
Translates to: RVLSLSEGLRTFSARLACAFILT*MVSNKW
Trigger: CCACTTGTTGGAGACCATCAATGTGAGGATGAAGGC...GCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACTTAAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGGCCTTCATCCTCACATaGATGGTCTCCAACAAGTGG +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMAFILT*MVSNKW
Trigger: CCACTTGTTGGAGACCATCAATGTGAGGATGAAGGC...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGTCTATCTGAAGGGCTCCGTACCTTTTCAGCAAGGTTGGCCTGCATCCTTTCATTGGCTGGTCAGCTTTaGAGAGGGGCTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: SLSEGLRTFSARLACILSLAGQL*RGAFSE
Trigger: TTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCAA...TGAAAGGATGCAGGCCAACCTTGCTGAAAAGGTACGGAGCCCTTCAGATAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGGCTCAAACTTGAACTaGCTCAGCTCGTGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHGSNLN*LSSWVN
Trigger: GTTGACCCACGAGCTGAGCAAGTTCAAGTTTGAGCC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCATTGGCTGGTCAGCTTTaGAGAGGGGCTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPLAGQL*RGAFSE
Trigger: TTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCAA...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATCCAGTGAGGTCCTGCTATTaGGCTGGTCAGCTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: GGDGLVMQITVNYSGDHPVRSCY*AGQLLR
Trigger: TCTCAAAAGCTGACCAGCCAAATAGCAGGACCTCAC...TGGATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTCCAACAACTTTTTGTaGAGGATCCGGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMSNNFL*RIRATF
Trigger: GAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGGA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTGCTCCAACAACTTTTaGTTGAGGATCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGCSNNF*LRIRAT
Trigger: TGTGGCCCGGATCCTCAACAAAAAGTTGTTGGAGCA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATAACTTGGCCATCTTTTaGCGCATCAGGGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHNLAIF*RIREAS
Trigger: GGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTT...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATGCCTTCATCCTCACATaGATGGTCTCCAACAAGTGG +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHAFILT*MVSNKW
Trigger: CCACTTGTTGGAGACCATCAATGTGAGGATGAAGGC...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCTTGGCTGGTCAGCTTTaGAGAGGGGCTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFLAGQL*RGAFSE
Trigger: TTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCAA...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp AACACTCCGAACTCAACATGGAGAAACCCAACCAGAACGGAACAGTGCAAATTCGTGAGGTCCTGCTATTaGGCTGGTCAGCTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: NTPNSTWRNPTRTEQCKFVRSCY*AGQLLR
Trigger: TCTCAAAAGCTGACCAGCCAAATAGCAGGACCTCAC...GAATTTGCACTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTCCAACAACTTTTTGTaGAGGATCCGGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: FPLGWRLADGGDGLVMQISNNFL*RIRATF
Trigger: GAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGGA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp CATCCTTCGACCTTGAGAAAGGATCTACATCTTTCCTTTGGGATGGAGGTTGGCTCCAACAACTTTTTGTaGAGGATCCGGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: HPSTLRKDLHLSFGMEVGSNNFL*RIRATF
Trigger: GAATGTGGCCCGGATCCTCAACAAAAAGTTGTTGGA...GCCAACCTCCATCCCAAAGGAAAGATGTAGATCCTTTCTCAAGGTCGAAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp GATGGCGGTGATGGTCTGGTTATGCAAATTACAGTGAACTATTCCGGCGATCATTGCTCCAACAACTTTTaGTTGAGGATCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: DGGDGLVMQITVNYSGDHCSNNF*LRIRAT
Trigger: TGTGGCCCGGATCCTCAACAAAAAGTTGTTGGAGCA...ATGATCGCCGGAATAGTTCACTGTAATTTGCATAACCAGACCATCACCGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp AGGCAGGCAGAACTGAGAACAAGGGTGCTCGGAATCTCTTCAAATGTACATTTTTTGGCTGGTCAGCTTTaGAGAGGGGCTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: RQAELRTRVLGISSNVHFLAGQL*RGAFSE
Trigger: TTCAGAGAAAGCCCCTCTCAAAAGCTGACCAGCCAA...AAAATGTACATTTGAAGAGATTCCGAGCACCCTTGTTCTCAGTTCTGCCTGCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TACATCTTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGTCCATCTTACGGATCTaGTTTGTGTATGTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: YIFPLGWRLADGGDGLVMSILRI*FVYVSV
Trigger: GACAGAGACATACACAAACAAGATCCGTAAGATGGA...CATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAAGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS-3UTR CAA 90 bp TCCTTTCAGATGACAGACACTCTCGTCTTCTGGCCTCACGGCCTTATCATTACAACAAGTTTCTTCTCTTaGTACATTTCCCGACTGCCT +
Preference number: 5 (lower is better)
Translates to: SFQMTDTLVFWPHGLIITTSFFS*YISRLP
Trigger: AGGCAGTCGGGAAATGTACAAAGAGAAGAAACTTGT...TGTAATGATAAGGCCGTGAGGCCAGAAGACGAGAGTGTCTGTCATCTGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS-3UTR CAA 90 bp TTTCCTTTGGGATGGAGGTTGGCTGATGGCGGTGATGGTCTGGTTATGCAAATTTCTTACGGATCTTGTTaGTGTATGTCTCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: FPLGWRLADGGDGLVMQISYGSC*CMSLSP
Trigger: AGGAGACAGAGACATACACAAACAAGATCCGTAAGA...AATTTGCATAACCAGACCATCACCGCCATCAGCCAACCTCCATCCCAAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS CAA 90 bp CGGCCCGCAGAGGGGGTGGCCGTGGCGGGCCGCGTGTGCAGGTCCTaGAGGAAGGGTCTGGCGGGCGAGGGTGCGCGGTGCAGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: RPAEGVAVAGRVCRS*RKGLAGEGARCSRL
Trigger: GAGGCGGCTGCACCGCGCACCCTCGCCCGCCAGACCCTTCCTCAAGGACCTGCACACGCGGCCCGCCACGGCCACCCCCTCTGCGGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CAA 90 bp GGCACGACGGCGCGAGCTGGAGGCGTCCCGGGGCCGCGCTTGGTTTaGCGACCCTTCGCGACGGCAGGCGGTGGCTCGGCCCCAGTCGGC +
Preference number: 6 (lower is better)
Translates to: GTTARAGGVPGPRLV*RPFATAGGGSAPVG
Trigger: GCCGACTGGGGCCGAGCCACCGCCTGCCGTCGCGAAGGGTCGCAAAACCAAGCGCGGCCCCGGGACGCCTCCAGCTCGCGCCGTCGTGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 72 bp CGCGAGCTGGAGGCGTCCCGGGGCCGCGCTTGGTTTTaGGACCCTTCGCGACGGCAGGCGGTGGCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: RELEASRGRAWF*DPSRRQAVARP
Trigger: GGGCCGAGCCACCGCCTGCCGTCGCGAAGGGTCGCAAAACCAAGCGCGGCCCCGGGACGCCTCCAGCTCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CAA 72 bp GAGGGGGTGGCCGTGGCGGGCCGCGTGTGCAGGTCCTaGAGGAAGGGTCTGGCGGGCGAGGGTGCGCGGTGC +
Preference number: 6 (lower is better)
Translates to: EGVAVAGRVCRS*RKGLAGEGARC
Trigger: GCACCGCGCACCCTCGCCCGCCAGACCCTTCCTCAAGGACCTGCACACGCGGCCCGCCACGGCCACCCCCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CAA 72 bp GCGCGAGCTGGAGGCGTCCCGGGGCCGCGCTTGGTTTaGCGACCCTTCGCGACGGCAGGCGGTGGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: ARAGGVPGPRLV*RPFATAGGGSA
Trigger: GGCCGAGCCACCGCCTGCCGTCGCGAAGGGTCGCAAAACCAAGCGCGGCCCCGGGACGCCTCCAGCTCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CCA 72 bp CGACGGCGCGAGCTGGAGGCGTCCCGGGGCCGCGCTTaGTTTTGCGACCCTTCGCGACGGCAGGCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: RRRELEASRGRA*FCDPSRRQAVA
Trigger: AGCCACCGCCTGCCGTCGCGAAGGGTCGCAAAACCAAGCGCGGCCCCGGGACGCCTCCAGCTCGCGCCGTCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CAA 72 bp ACGACGGCGCGAGCTGGAGGCGTCCCGGGGCCGCGCTaGGTTTTGCGACCCTTCGCGACGGCAGGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: TTARAGGVPGPR*VLRPFATAGGG
Trigger: GCCACCGCCTGCCGTCGCGAAGGGTCGCAAAACCAAGCGCGGCCCCGGGACGCCTCCAGCTCGCGCCGTCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 72 bp TCCTTGAGGAAGGGTCTGGCGGGCGAGGGTGCGCGGTaGAGCCGCCTCCTCTCGGCCAGCGGGTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: SLRKGLAGEGAR*SRLLSASGCRW
Trigger: CCACCTGCACCCGCTGGCCGAGAGGAGGCGGCTGCACCGCGCACCCTCGCCCGCCAGACCCTTCCTCAAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 72 bp GTGCAGGTCCTTGAGGAAGGGTCTGGCGGGCGAGGGTaGGCGGTGCAGCCGCCTCCTCTCGGCCAGCGGGTG +
Preference number: 6 (lower is better)
Translates to: VQVLEEGSGGRG*AVQPPPLGQRV
Trigger: CACCCGCTGGCCGAGAGGAGGCGGCTGCACCGCGCACCCTCGCCCGCCAGACCCTTCCTCAAGGACCTGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CCA 72 bp CGGAATCCCCATCCGCGCGCCGGTGCAGCTCCCGAGTaGCTCGGAGACGCAGGCCCTCTCGCTCGTCCCCTC +
Preference number: 6 (lower is better)
Translates to: RNPHPRAGAAPE*LGDAGPLARPL
Trigger: GAGGGGACGAGCGAGAGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACCGGCGCGCGGATGGGGATTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp CCATGGTGGCTCCCGGAATCCCCATCCGCGCGCCGGTaGAGCTCCCGAGTGGCTCGGAGACGCAGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PWWLPESPSARR*SSRVARRRRPS
Trigger: AGAGGGCCTGCGTCTCCGAGCCACTCGGGAGCTGCACCGGCGCGCGGATGGGGATTCCGGGAGCCACCATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp CCCGGTCACTGGAGCCGGTGCCCGACTCAGCGTCGCTaGTGGCGGCGGGGAGTAGGCGCTGCTCATCAGACA +
Preference number: 6 (lower is better)
Translates to: PGHWSRCPTQRR*WRRGVGAAHQT
Trigger: TGTCTGATGAGCAGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 72 bp GTGCTCCGCGTATGGGTTCCCGGTCACTGGAGCCGGTaGCCGACTCAGCGTCGCTGCTGGCGGCGGGGAGTA +
Preference number: 6 (lower is better)
Translates to: VLRVWVPGHWSR*PTQRRCWRRGV
Trigger: TACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCATACGCGGAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CCA 72 bp TCGGAGTGGGTGCTCCGCGTATGGGTTCCCGGTCACTaGAGCCGGTGCCCGACTCAGCGTCGCTGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: SEWVLRVWVPGH*SRCPTQRRCWR
Trigger: CCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACCGGGAACCCATACGCGGAGCACCCACTCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CCA 72 bp GGTCACTGGAGCCGGTGCCCGACTCAGCGTCGCTGCTaGCGGCGGGGAGTAGGCGCTGCTCATCAGACAAGG +
Preference number: 6 (lower is better)
Translates to: GHWSRCPTQRRC*RRGVGAAHQTR
Trigger: CCTTGTCTGATGAGCAGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGTCGGGCACCGGCTCCAGTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 72 bp GACTCAGCGTCGCTGCTGGCGGCGGGGAGTAGGCGCTaGTCATCAGACAAGGGTTCGGAGGCGCAGTCGGAG +
Preference number: 6 (lower is better)
Translates to: DSASLLAAGSRR*SSDKGSEAQSE
Trigger: CTCCGACTGCGCCTCCGAACCCTTGTCTGATGAGCAGCGCCTACTCCCCGCCGCCAGCAGCGACGCTGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 72 bp TCGCTGGCGTACTGCTGCTGCAGCCGCAGCCGCGCATaGTCGTCTTCGCGCAGCTCCGAACGGAAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLAYCCCSRSRA*SSSRSSERKSS
Trigger: GGAGGACTTCCGTTCGGAGCTGCGCGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp ACATCCCACGCAGCCTTGTCGCTGGCGTACTGCTGCTaGAGCCGCAGCCGCGCATGCTCGTCTTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: TSHAALSLAYCC*SRSRACSSSRS
Trigger: GCTGCGCGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGTGGGATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp TCCACATCCCACGCAGCCTTGTCGCTGGCGTACTGCTaGTGCAGCCGCAGCCGCGCATGCTCGTCTTCGCGC +
Preference number: 6 (lower is better)
Translates to: STSHAALSLAYC*CSRSRACSSSR
Trigger: GCGCGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGTGGGATGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp AGGCTCCTTGGAGGTCCCCAGAATCGTCCGCTCCGGTaGCGCTCGGCCCCCAACATCCTCCTGAGAACCGGG +
Preference number: 6 (lower is better)
Translates to: RLLGGPQNRPLR*RSAPNILLRTG
Trigger: CCCGGTTCTCAGGAGGATGTTGGGGGCCGAGCGCCACCGGAGCGGACGATTCTGGGGACCTCCAAGGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS CAA 72 bp ACCAAGAGCCGGGGCTGTTCGCCCAGGCTAGGCTCCTaGGAGGTCCCCAGAATCGTCCGCTCCGGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: TKSRGCSPRLGS*EVPRIVRSGGA
Trigger: AGCGCCACCGGAGCGGACGATTCTGGGGACCTCCAAGGAGCCTAGCCTGGGCGAACAGCCCCGGCTCTTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
CDS GCA 72 bp CACTCCACATCCCACGCAGCCTTGTCGCTGGCGTACTaGTGCTGCAGCCGCAGCCGCGCATGCTCGTCTTCG +
Preference number: 6 (lower is better)
Translates to: HSTSHAALSLAY*CCSRSRACSSS
Trigger: CGAAGACGAGCATGCGCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGTGGGATGTGGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp GCGCGCAGCCCCAGATGTGCGGCGAGGTCACCCCGTTaGGCATTGGACAGAAGCAGCCGGTTCTCACACTGC +
Preference number: 6 (lower is better)
Translates to: ARSPRCAARSPR*ALDRSSRFSHC
Trigger: GCAGTGTGAGAACCGGCTGCTTCTGTCCAATGCCCAACGGGGTGACCTCGCCGCACATCTGGGGCTGCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp TCTAGGTTGAAACAGCTCTGGCCTCCCAGCCCATGGTaGCTCCCGGAATCCCCATCCGCGCGCCGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SRLKQLWPPSPW*LPESPSARRCS
Trigger: GCTGCACCGGCGCGCGGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCAGAGCTGTTTCAACCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp AGCTCTAGGTTGAAACAGCTCTGGCCTCCCAGCCCATaGTGGCTCCCGGAATCCCCATCCGCGCGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: SSRLKQLWPPSP*WLPESPSARRC
Trigger: GCACCGGCGCGCGGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCAGAGCTGTTTCAACCTAGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS CAA 72 bp CACTTGAGCACAGCCCACTCCACATCCCACGCAGCCTaGTCGCTGGCGTACTGCTGCTGCAGCCGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: HLSTAHSTSHAA*SLAYCCCSRSR
Trigger: GCGGCTGCGGCTGCAGCAGCAGTACGCCAGCGACAAGGCTGCGTGGGATGTGGAGTGGGCTGTGCTCAAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp TCAACCCGGCGAATGGCAGGCGGGCTGTGCAGCACGTaGACACCAGACTGCTCAGTGAGGACATGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: STRRMAGGLCST*TPDCSVRTWVR
Trigger: GCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCATTCGCCGGGTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp TCGCTCTCCCCACCAACAGGGCCTTCTCGCTTTGGCTaGGGAAGGCGGCCCTCCTCCCCATCGCTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: SLSPPTGPSRFG*GRRPSSPSLSF
Trigger: GAAAGAGAGCGATGGGGAGGAGGGCCGCCTTCCCCAGCCAAAGCGAGAAGGCCCTGTTGGTGGGGAGAGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp ATCTCTAGGTTGAAACAGCTCTGGCCTCCCAGCCCATaGTGGCTCCCGGAATCCCCATCCGCGCGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: ISRLKQLWPPSP*WLPESPSARRC
Trigger: GCACCGGCGCGCGGATGGGGATTCCGGGAGCCACCATGGGCTGGGAGGCCAGAGCTGTTTCAACCTAGAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS CCA 72 bp CTGGGCGACCTCCCTCTGGAACTGGTGCCCGTTTCCTaGCCTGGACCCAGCTCCTGTCGAGGTTCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: LGDLPLELVPVS*PGPSSCRGSAD
Trigger: GTCAGCAGAACCTCGACAGGAGCTGGGTCCAGGCCAGGAAACGGGCACCAGTTCCAGAGGGAGGTCGCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp AGCGCGCAGCCCCAGATGTGCGGCGAGGTCACCCCGTaGGGCATTGGACAGAAGCAGCCGGTTCTCACACTG +
Preference number: 6 (lower is better)
Translates to: SAQPQMCGEVTP*GIGQKQPVLTL
Trigger: CAGTGTGAGAACCGGCTGCTTCTGTCCAATGCCCAACGGGGTGACCTCGCCGCACATCTGGGGCTGCGCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp CTGTCCTGGACCCATTGGTCTGGCAGGCCATATCCCTaGCGTGTGGCTCGGCAGGACCGGCGCAGATGGCAT +
Preference number: 6 (lower is better)
Translates to: LSWTHWSGRPYP*RVARQDRRRWH
Trigger: ATGCCATCTGCGCCGGTCCTGCCGAGCCACACGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp ATGGCAGGCGGGCTGTGCAGCACGTGCACACCAGACTaGTCAGTGAGGACATGGGTCCGCAGTGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: MAGGLCSTCTPD*SVRTWVRSGCF
Trigger: GAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp CCTCGCCGCCTGATGCTATACTGTCAACCCGGCGAATaGCAGGCGGGCTGTGCAGCACGTGCACACCAGACT +
Preference number: 6 (lower is better)
Translates to: PRRLMLYCQPGE*QAGCAARAHQT
Trigger: AGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCATTCGCCGGGTTGACAGTATAGCATCAGGCGGCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp GGACCCATTGGTCTGGCAGGCCATATCCCTGACGTGTaGCTCGGCAGGACCGGCGCAGATGGCATTCCTGAC +
Preference number: 6 (lower is better)
Translates to: GPIGLAGHIPDV*LGRTGADGIPD
Trigger: GTCAGGAATGCCATCTGCGCCGGTCCTGCCGAGCCACACGTCAGGGATATGGCCTGCCAGACCAATGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 90 bp ACGCTGATTGTCTGGATGGTCTGCGTCCCTGCTGTCCTGGACCCATaGGTCTGGCAGGCCATATCCCTGACGTGTGGCTCGGCAGGACCG +
Preference number: 6 (lower is better)
Translates to: TLIVWMVCVPAVLDP*VWQAISLTCGSAGP
Trigger: CGGTCCTGCCGAGCCACACGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGCAGACCATCCAGACAATCAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp CGGCTGGCACTGGTTCTCCAGTGTGGCTGTCGCTGGTaGGACCTGAGGAGCCATGGCTGGCTTGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RLALVLQCGCRW*DLRSHGWLASS
Trigger: AGAGGAAGCAAGCCAGCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACACTGGAGAACCAGTGCCAGCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp TCATCGATCTGTAGCCTGGCTGACTTCAGCTCCTCCTaGAGGGGAACGCTGGCCGCGGGGCCCTTAGACACA +
Preference number: 6 (lower is better)
Translates to: SSICSLADFSSS*RGTLAAGPLDT
Trigger: TGTGTCTAAGGGCCCCGCGGCCAGCGTTCCCCTGCAGGAGGAGCTGAAGTCAGCCAGGCTACAGATCGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp GCCCCAGATGTGCGGCGAGGTCACCCCGTTGGGCATTaGACAGAAGCAGCCGGTTCTCACACTGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: APDVRRGHPVGH*TEAAGSHTAAS
Trigger: TGAAGCTGCAGTGTGAGAACCGGCTGCTTCTGTCCAATGCCCAACGGGGTGACCTCGCCGCACATCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp TGCAGCACGTGCACACCAGACTGCTCAGTGAGGACATaGGTCCGCAGTGGCTGCTTCTGGCAGTGCTCCGGA +
Preference number: 6 (lower is better)
Translates to: CSTCTPDCSVRT*VRSGCFWQCSG
Trigger: TCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp ATGGTCTGCGTCCCTGCTGTCCTGGACCCATTGGTCTaGCAGGCCATATCCCTGACGTGTGGCTCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: MVCVPAVLDPLV*QAISLTCGSAG
Trigger: TCCTGCCGAGCCACACGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGCAGACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp ATGGATCCTGGCTCGGCTGGCACTGGTTCTCCAGTGTaGCTGTCGCTGGTGAGACCTGAGGAGCCATGGCTG +
Preference number: 6 (lower is better)
Translates to: MDPGSAGTGSPV*LSLVRPEEPWL
Trigger: CAGCCATGGCTCCTCAGGTCTCACCAGCGACAGCCACACTGGAGAACCAGTGCCAGCCGAGCCAGGATCCAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp CGCGAGCGCAGAACAAGGCAGTTCCTCCATGGATCCTaGCTCGGCTGGCACTGGTTCTCCAGTGTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: RERRTRQFLHGS*LGWHWFSSVAV
Trigger: GACAGCCACACTGGAGAACCAGTGCCAGCCGAGCCAGGATCCATGGAGGAACTGCCTTGTTCTGCGCTCGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS CCA 72 bp CCTTGCGCCTCGGTGCCAGCTTCCTTTGGGTTTTGGTaGCCGACCTGCAGTTCCCAGGACGTTCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: PCASVPASFGFW*PTCSSQDVPLH
Trigger: GTGGAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS CAA 72 bp AGCCCCAGATGTGCGGCGAGGTCACCCCGTTGGGCATaGGACAGAAGCAGCCGGTTCTCACACTGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SPRCAARSPRWA*DRSSRFSHCSF
Trigger: GAAGCTGCAGTGTGAGAACCGGCTGCTTCTGTCCAATGCCCAACGGGGTGACCTCGCCGCACATCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp AAGTCGTCGGGAGACAAGGGTGGAGTGACATCCTCCTaGCTGCCGGCGGAAGGTAGCCCCTTCTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KSSGDKGGVTSS*LPAEGSPFSGR
Trigger: CCTGCCTGAGAAGGGGCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGACGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp GTCTGGATGGTCTGCGTCCCTGCTGTCCTGGACCCATaGGTCTGGCAGGCCATATCCCTGACGTGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: VWMVCVPAVLDP*VWQAISLTCGS
Trigger: CGAGCCACACGTCAGGGATATGGCCTGCCAGACCAATGGGTCCAGGACAGCAGGGACGCAGACCATCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp CGCACTGTCATCCTTGCGCCTCGGTGCCAGCTTCCTTaGGGTTTTGGTGGCCGACCTGCAGTTCCCAGGACG +
Preference number: 6 (lower is better)
Translates to: RTVILAPRCQLP*GFGGRPAVPRT
Trigger: CGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGACAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS TCA 72 bp CGCGGGGCCCTTAGACACACCGTCCCCAAGCCACCCTaGCTCCTGGTGAGGCTCAAACTTGAACTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: RGALRHTVPKPP*LLVRLKLELAQ
Trigger: CTGAGCAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTGGCTTGGGGACGGTGTGTCTAAGGGCCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp CGGAGACGCAGGCCCTCTCGCTCGTCCCCTCGATCCTaGTTGAGCTGCCATTCCAGCTGCTCTCTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: RRRRPSRSSPRS*LSCHSSCSLSL
Trigger: CAAACTGAGAGAGCAGCTGGAATGGCAGCTCAATCAGGATCGAGGGGACGAGCGAGAGGGCCTGCGTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp GGTGCGGGTAAGGGCGTGTGTCGTCTTCCCTTCGGCTaGAGAGGAAACTGCCGCTTCTCCGGGGACTTTTCT +
Preference number: 6 (lower is better)
Translates to: GAGKGVCRLPFG*RGNCRFSGDFS
Trigger: AGAAAAGTCCCCGGAGAAGCGGCAGTTTCCTCTGCAGCCGAAGGGAAGACGACACACGCCCTTACCCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp CCAGACTGCTCAGTGAGGACATGGGTCCGCAGTGGCTaGTTCTGGCAGTGCTCCGGACTGGTCATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: PDCSVRTWVRSG*FWQCSGLVMVS
Trigger: AGACACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp GCTATACTGTCAACCCGGCGAATGGCAGGCGGGCTGTaGAGCACGTGCACACCAGACTGCTCAGTGAGGACA +
Preference number: 6 (lower is better)
Translates to: AILSTRRMAGGL*STCTPDCSVRT
Trigger: TGTCCTCACTGAGCAGTCTGGTGTGCACGTGCTGCACAGCCCGCCTGCCATTCGCCGGGTTGACAGTATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp AGTCGGCGTCTTCACAGGGCCACATGGACACAGGTCTaGAGGAGTGAAGGCTTCCTTGGTGCGGGTAAGGGC +
Preference number: 6 (lower is better)
Translates to: SRRLHRATWTQV*RSEGFLGAGKG
Trigger: GCCCTTACCCGCACCAAGGAAGCCTTCACTCCTCCAGACCTGTGTCCATGTGGCCCTGTGAAGACGCCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp CACACCAGACTGCTCAGTGAGGACATGGGTCCGCAGTaGCTGCTTCTGGCAGTGCTCCGGACTGGTCATGGT +
Preference number: 6 (lower is better)
Translates to: HTRLLSEDMGPQ*LLLAVLRTGHG
Trigger: ACCATGACCAGTCCGGAGCACTGCCAGAAGCAGCCACTGCGGACCCATGTCCTCACTGAGCAGTCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp CATCCTTGCGCCTCGGTGCCAGCTTCCTTTGGGTTTTaGTGGCCGACCTGCAGTTCCCAGGACGTTCCACTC +
Preference number: 6 (lower is better)
Translates to: HPCASVPASFGF*WPTCSSQDVPL
Trigger: GAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS CAA 72 bp TTGATGGTCTCCAACAAGTGGGGCTCACTCGGGCTGTaGCCCTCACCTCCTCCGCCTTGGACTCCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: LMVSNKWGSLGL*PSPPPPWTPGE
Trigger: CTCACCTGGAGTCCAAGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGCCCCACTTGTTGGAGACCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 90 bp TTCACAGGGCCACATGGACACAGGTCTGGAGGAGTGAAGGCTTCCTaGGTGCGGGTAAGGGCGTGTGTCGTCTTCCCTTCGGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: FTGPHGHRSGGVKAS*VRVRACVVFPSAAE
Trigger: CTCTGCAGCCGAAGGGAAGACGACACACGCCCTTACCCGCACCAAGGAAGCCTTCACTCCTCCAGACCTGTGTCCATGTGGCCCTGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 90 bp TCCGCACTGTCATCCTTGCGCCTCGGTGCCAGCTTCCTTTGGGTTTaGGTGGCCGACCTGCAGTTCCCAGGACGTTCCACTCCACCATTC +
Preference number: 6 (lower is better)
Translates to: SALSSLRLGASFLWV*VADLQFPGRSTPPF
Trigger: GAATGGTGGAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGACAGTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS TCA 72 bp TGCAGCAGATTCTTCTCGTCGCTCCACGTCCGCTTGTaGAGGGTGTTCTGCAGGGCCAGGCTGTGCATCTCC +
Preference number: 6 (lower is better)
Translates to: CSRFFSSLHVRL*RVFCRARLCIS
Trigger: GGAGATGCACAGCCTGGCCCTGCAGAACACCCTTCACAAGCGGACGTGGAGCGACGAGAAGAATCTGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp CCCCGTCTGAACTCTGTAGCCGTGATCCGTGTTCGCTaGTCTGTACCAGGGAGTGTGGGGCATGCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: PRLNSVAVIRVR*SVPGSVGHALP
Trigger: TGGGAGAGCATGCCCCACACTCCCTGGTACAGATCAGCGAACACGGATCACGGCTACAGAGTTCAGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp TCTCACTGGCCGAGCACCTGTCCGACTCCTTCAGTTTaGAGAGCGGCCGGTCTTCAAATGGGATGGAGTCGG +
Preference number: 6 (lower is better)
Translates to: SHWPSTCPTPSV*RAAGLQMGWSR
Trigger: CCGACTCCATCCCATTTGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGGACAGGTGCTCGGCCAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp AGAACAAGGCAGTTCCTCCATGGATCCTGGCTCGGCTaGCACTGGTTCTCCAGTGTGGCTGTCGCTGGTGAG +
Preference number: 6 (lower is better)
Translates to: RTRQFLHGSWLG*HWFSSVAVAGE
Trigger: CTCACCAGCGACAGCCACACTGGAGAACCAGTGCCAGCCGAGCCAGGATCCATGGAGGAACTGCCTTGTTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086693.12
ENSMUST00000145347.8
CDS CAA 72 bp ACCTCCACCTCGATCATCTGCTGCCGGAGCGTTTCGTaGTCGTCTTCAGCCTTAGCGCGCTTCTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: TSTSIICCRSVS*SSSALARFSST
Trigger: CGTGGAGGAGAAGCGCGCTAAGGCTGAAGACGACAACGAAACGCTCCGGCAGCAGATGATCGAGGTGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS CAA 72 bp CCTCCTCCGCCTTGGACTCCAGGTGAGGCCAATCCATaGCCCCGCAGTCCTGAGTCGTGGATGAAACCATCT +
Preference number: 6 (lower is better)
Translates to: PPPPWTPGEANP*PRSPESWMKPS
Trigger: AGATGGTTTCATCCACGACTCAGGACTGCGGGGCAATGGATTGGCCTCACCTGGAGTCCAAGGCGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp CCACATGGACACAGGTCTGGAGGAGTGAAGGCTTCCTaGGTGCGGGTAAGGGCGTGTGTCGTCTTCCCTTCG +
Preference number: 6 (lower is better)
Translates to: PHGHRSGGVKAS*VRVRACVVFPS
Trigger: CGAAGGGAAGACGACACACGCCCTTACCCGCACCAAGGAAGCCTTCACTCCTCCAGACCTGTGTCCATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp TCATCCTTGCGCCTCGGTGCCAGCTTCCTTTGGGTTTaGGTGGCCGACCTGCAGTTCCCAGGACGTTCCACT +
Preference number: 6 (lower is better)
Translates to: SSLRLGASFLWV*VADLQFPGRST
Trigger: AGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS CAA 90 bp ATCCTCACATTGATGGTCTCCAACAAGTGGGGCTCACTCGGGCTGTaGCCCTCACCTCCTCCGCCTTGGACTCCAGGTGAGGCCAATCCA +
Preference number: 6 (lower is better)
Translates to: ILTLMVSNKWGSLGL*PSPPPPWTPGEANP
Trigger: TGGATTGGCCTCACCTGGAGTCCAAGGCGGAGGAGGTGAGGGCAACAGCCCGAGTGAGCCCCACTTGTTGGAGACCATCAATGTGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 90 bp CTTCAAATCCGCACTGTCATCCTTGCGCCTCGGTGCCAGCTTCCTTaGGGTTTTGGTGGCCGACCTGCAGTTCCCAGGACGTTCCACTCC +
Preference number: 6 (lower is better)
Translates to: LQIRTVILAPRCQLP*GFGGRPAVPRTFHS
Trigger: GGAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGACAGTGCGGATTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS CAA 90 bp TGTCTGGATACCTCCACCTCGATCATCTGCTGCCGGAGCGTTTCGTaGTCGTCTTCAGCCTTAGCGCGCTTCTCCTCCACGGTCTCGAGT +
Preference number: 6 (lower is better)
Translates to: CLDTSTSIICCRSVS*SSSALARFSSTVSS
Trigger: ACTCGAGACCGTGGAGGAGAAGCGCGCTAAGGCTGAAGACGACAACGAAACGCTCCGGCAGCAGATGATCGAGGTGGAGGTATCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS CAA 90 bp ATGTATTTCAAGTCGTCGGGAGACAAGGGTGGAGTGACATCCTCCTaGCTGCCGGCGGAAGGTAGCCCCTTCTCAGGCAGGAACGGAGAG +
Preference number: 6 (lower is better)
Translates to: MYFKSSGDKGGVTSS*LPAEGSPFSGRNGE
Trigger: CTCTCCGTTCCTGCCTGAGAAGGGGCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGACGACTTGAAATACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp GGCACGTGGTCCCTGCCTGTTCCCTCGCGTTCATGCTaGACCCGTATGTCTTCCATCTCTGCTTTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: GTWSLPVPSRSC*TRMSSISALRP
Trigger: TGGCCTCAAAGCAGAGATGGAAGACATACGGGTTCAGCATGAACGCGAGGGAACAGGCAGGGACCACGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp CCCCAAGCCACCCTGACTCCTGGTGAGGCTCAAACTTaGACTTGCTCAGCTCGTGGGTCAACTGCCGGTTGT +
Preference number: 6 (lower is better)
Translates to: PQATLTPGEAQT*TCSARGSTAGC
Trigger: ACAACCGGCAGTTGACCCACGAGCTGAGCAAGTTCAAGTTTGAGCCTCACCAGGAGTCAGGGTGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp AGGGCCTGTCTGGATACCTCCACCTCGATCATCTGCTaGCGGAGCGTTTCGTTGTCGTCTTCAGCCTTAGCG +
Preference number: 6 (lower is better)
Translates to: RACLDTSTSIIC*RSVSLSSSALA
Trigger: CGCTAAGGCTGAAGACGACAACGAAACGCTCCGGCAGCAGATGATCGAGGTGGAGGTATCCAGACAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS GCA 72 bp TCGGTGCCAGCTTCCTTTGGGTTTTGGTGGCCGACCTaGAGTTCCCAGGACGTTCCACTCCACCATTCTGGT +
Preference number: 6 (lower is better)
Translates to: SVPASFGFWWPT*SSQDVPLHHSG
Trigger: ACCAGAATGGTGGAGTGGAACGTCCTGGGAACTGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS CCA 72 bp CTGGACTCCAAGCTCAGCAAGCCCAGGCACATTCTCTaGATGTTCGCTCTCCTCCAGATCCTCTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LDSKLSKPRHIL*MFALLQILSSL
Trigger: GAGGGAGGAGAGGATCTGGAGGAGAGCGAACATCCAGAGAATGTGCCTGGGCTTGCTGAGCTTGGAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp CGACTCCTTCAGTTTGGAGAGCGGCCGGTCTTCAAATaGGATGGAGTCGGCGTCTTCACAGGGCCACATGGA +
Preference number: 6 (lower is better)
Translates to: RLLQFGERPVFK*DGVGVFTGPHG
Trigger: TCCATGTGGCCCTGTGAAGACGCCGACTCCATCCCATTTGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp TTCTCAGTCTTCTCTTCCAGCTGTTCCAGGCGGCACTaGAGCACAGCCCACTCCACATCCCACGCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: FSVFSSSCSRRH*STAHSTSHAAL
Trigger: CAAGGCTGCGTGGGATGTGGAGTGGGCTGTGCTCAAGTGCCGCCTGGAACAGCTGGAAGAGAAGACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp TTCTCACTGGCCGAGCACCTGTCCGACTCCTTCAGTTaGGAGAGCGGCCGGTCTTCAAATGGGATGGAGTCG +
Preference number: 6 (lower is better)
Translates to: FSLAEHLSDSFS*ESGRSSNGMES
Trigger: CGACTCCATCCCATTTGAAGACCGGCCGCTCTCCAAACTGAAGGAGTCGGACAGGTGCTCGGCCAGTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp CAATGTATTTCAAGTCGTCGGGAGACAAGGGTGGAGTaGCATCCTCCTTGCTGCCGGCGGAAGGTAGCCCCT +
Preference number: 6 (lower is better)
Translates to: QCISSRRETRVE*HPPCCRRKVAP
Trigger: AGGGGCTACCTTCCGCCGGCAGCAAGGAGGATGTCACTCCACCCTTGTCTCCCGACGACTTGAAATACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp AGTGCTCCGGACTGGTCATGGTGTCTGTCGTCATCGTaGCACTTGTGGTCAGATACCAGGAGGGATCCGGAC +
Preference number: 6 (lower is better)
Translates to: SAPDWSWCLSSS*HLWSDTRRDPD
Trigger: GTCCGGATCCCTCCTGGTATCTGACCACAAGTGTCACGATGACGACAGACACCATGACCAGTCCGGAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp CGTTGGGCATTGGACAGAAGCAGCCGGTTCTCACACTaGAGCTTCAGTACCTTCCCGCTCAGCTCATCGATC +
Preference number: 6 (lower is better)
Translates to: RWALDRSSRFSH*SFSTFPLSSSI
Trigger: GATCGATGAGCTGAGCGGGAAGGTACTGAAGCTGCAGTGTGAGAACCGGCTGCTTCTGTCCAATGCCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp ACACTTCAAATCCGCACTGTCATCCTTGCGCCTCGGTaGCAGCTTCCTTTGGGTTTTGGTGGCCGACCTGCA +
Preference number: 6 (lower is better)
Translates to: TLQIRTVILAPR*QLPLGFGGRPA
Trigger: TGCAGGTCGGCCACCAAAACCCAAAGGAAGCTGGCACCGAGGCGCAAGGATGACAGTGCGGATTTGAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145347.8
CDS CCA 72 bp ACTTTCTTCTTCCTCGGCAAGGCAGTTCCTGAGGGGTaGCGGATCCCCTGGATCATCATCCAGGGACAAAGC +
Preference number: 6 (lower is better)
Translates to: TFFFLGKAVPEG*RIPWIIIQGQS
Trigger: GCTTTGTCCCTGGATGATGATCCAGGGGATCCGCCACCCCTCAGGAACTGCCTTGCCGAGGAAGAAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS CCA 72 bp TTCTCAGGCAGGAACGGAGAGACGTCCATCAGACGCTaGAACTCGGACATACAGGACACAGACACAGCCCTC +
Preference number: 6 (lower is better)
Translates to: FSGRNGETSIRR*NSDIQDTDTAL
Trigger: GAGGGCTGTGTCTGTGTCCTGTATGTCCGAGTTCCAGCGTCTGATGGACGTCTCTCCGTTCCTGCCTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CCA 72 bp CCCAGGGGGCAGTTAGTAAGACAGTTTGGTTCTCCATaGATCCTGGCTCGGCTGGCACTGGTTCTCCAGTGT +
Preference number: 6 (lower is better)
Translates to: PRGQLVRQFGSP*ILARLALVLQC
Trigger: ACACTGGAGAACCAGTGCCAGCCGAGCCAGGATCCATGGAGAACCAAACTGTCTTACTAACTGCCCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS CAA 90 bp AGAGCCTTGAGGGCCCTGAAGAGCTGCTGGTTTTCCACCACCTGTTaGTTAAGTGGTCCCCCGTCTGAACTCTGTAGCCGTGATCCGTGT +
Preference number: 6 (lower is better)
Translates to: RALRALKSCWFSTTC*LSGPPSELCSRDPC
Trigger: ACACGGATCACGGCTACAGAGTTCAGACGGGGGACCACTTAACAAACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGCCCTCAAGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp GGCGTGTGTCGTCTTCCCTTCGGCTGCAGAGGAAACTaGCGCTTCTCCGGGGACTTTTCTCTTTCTGTAACT +
Preference number: 6 (lower is better)
Translates to: GVCRLPFGCRGN*RFSGDFSLSVT
Trigger: AGTTACAGAAAGAGAAAAGTCCCCGGAGAAGCGGCAGTTTCCTCTGCAGCCGAAGGGAAGACGACACACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS GCA 72 bp TACAGGACACAGACACAGCCCTCTGAAGATTGCCCTTaGGACTTTCTTCTTCCTCGGGGGACAAACCCAGGC +
Preference number: 6 (lower is better)
Translates to: YRTQTQPSEDCP*DFLLPRGTNPG
Trigger: GCCTGGGTTTGTCCCCCGAGGAAGAAGAAAGTCGCAAGGGCAATCTTCAGAGGGCTGTGTCTGTGTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS CCA 72 bp CATCCAGGGACAAAGCGTCCAAGTACAGGTTCTCACTaGCCGAGCACCTGTCCGACTCCTTCAGTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: HPGTKRPSTGSH*PSTCPTPSVWR
Trigger: TCTCCAAACTGAAGGAGTCGGACAGGTGCTCGGCCAGTGAGAACCTGTACTTGGACGCTTTGTCCCTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp AGTTCCTGCTCCAACTCGTCCTTCTCCCGCCCCAACTaGGCCATCTTTTTGCGCATCAGGGAAGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SSCSNSSFSRPN*AIFLRIREASS
Trigger: AGAGGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGAAGGACGAGTTGGAGCAGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp AGGGCCCTGAAGAGCTGCTGGTTTTCCACCACCTGTTaGTTAAGTGGTCCCCCGTCTGAACTCTGTAGCCGT +
Preference number: 6 (lower is better)
Translates to: RALKSCWFSTTC*LSGPPSELCSR
Trigger: ACGGCTACAGAGTTCAGACGGGGGACCACTTAACAAACAGGTGGTGGAAAACCAGCAGCTCTTCAGGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp TGGAACTCGGACATACAGGACACAGACACAGCCCTCTaGAGATTGCCCTTGCGACTTTCTTCTTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: WNSDIQDTDTAL*RLPLRLSSSSG
Trigger: CCCCGAGGAAGAAGAAAGTCGCAAGGGCAATCTTCAGAGGGCTGTGTCTGTGTCCTGTATGTCCGAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS GCA 72 bp TTCAGGCTCTTCTGCTCGGCTTTCCTGAGTCGGTACTaGAGGATTCTGCAGTTCTTGTTAGCACGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: FRLFCSAFLSRY*RILQFLLARSS
Trigger: GCTGGACCGTGCTAACAAGAACTGCAGAATCCTGCAGTACCGACTCAGGAAAGCCGAGCAGAAGAGCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS GCA 72 bp CGGACATACAGGACACAGACACAGCCCTCTGAAGATTaGCCTTGCGACTTTCTTCTTCCTCGGCAAGGCAGT +
Preference number: 6 (lower is better)
Translates to: RTYRTQTQPSED*PCDFLLPRQGS
Trigger: ACTGCCTTGCCGAGGAAGAAGAAAGTCGCAAGGGCAATCTTCAGAGGGCTGTGTCTGTGTCCTGTATGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS GCA 72 bp CGGACATACAGGACACAGACACAGCCCTCTGAAGATTaGCCTTGCGACTTTCTTCTTCCTCGGGGGACAAAC +
Preference number: 6 (lower is better)
Translates to: RTYRTQTQPSED*PCDFLLPRGTN
Trigger: GTTTGTCCCCCGAGGAAGAAGAAAGTCGCAAGGGCAATCTTCAGAGGGCTGTGTCTGTGTCCTGTATGTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS CCA 72 bp GCCTTAGCGCGCTTCTCCTCCACGGTCTCGAGTTCGTaGTGTAATCTGACAGACACATCTTTGGCTACCTTC +
Preference number: 6 (lower is better)
Translates to: ALARFSSTVSSS*CNLTDTSLATF
Trigger: GAAGGTAGCCAAAGATGTGTCTGTCAGATTACACCACGAACTCGAGACCGTGGAGGAGAAGCGCGCTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS CAA 72 bp CTTACGGATCTTGTTTGTGTATGTCTCTGTCTCCTCTaGATGGAGTCTGGCCGCCTGCTCGAGCTGACCCTG +
Preference number: 6 (lower is better)
Translates to: LTDLVCVCLCLL*MESGRLLELTL
Trigger: CAGGGTCAGCTCGAGCAGGCGGCCAGACTCCATCAAGAGGAGACAGAGACATACACAAACAAGATCCGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS TCA 72 bp TGGAACTCGGACATACAGGACACAGACACAGCCCTCTaGAGATTGCCCTTGCGACTTTCTTCTTCCTCGGCA +
Preference number: 6 (lower is better)
Translates to: WNSDIQDTDTAL*RLPLRLSSSSA
Trigger: TGCCGAGGAAGAAGAAAGTCGCAAGGGCAATCTTCAGAGGGCTGTGTCTGTGTCCTGTATGTCCGAGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
CDS CCA 72 bp TGTTTGTGTATGTCTCTGTCTCCTCTTGATGGAGTCTaGCCGCCTGCTCGAGCTGACCCTGTAGCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: CLCMSLSPLDGV*PPARADPVALL
Trigger: TAGAAGAGCTACAGGGTCAGCTCGAGCAGGCGGCCAGACTCCATCAAGAGGAGACAGAGACATACACAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS CAA 90 bp TACTTCTGCAGTTCCTGCTCCAACTCGTCCTTCTCCCGCCCCAACTaGGCCATCTTTTTGCGCATCAGGGAAGCTTCCTCTTTGACAAAC +
Preference number: 6 (lower is better)
Translates to: YFCSSCSNSSFSRPN*AIFLRIREASSLTN
Trigger: GTTTGTCAAAGAGGAAGCTTCCCTGATGCGCAAAAAGATGGCCAAGTTGGGGCGGGAGAAGGACGAGTTGGAGCAGGAACTGCAGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS TCA 72 bp GCTTCTCCTCCACGGTCTCGAGTTCGTGGTGTAATCTaGCAGACACATCTTTGGCTACCTTCAAGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: ASPPRSRVRGVI*QTHLWLPSSPA
Trigger: AGCAGGACTTGAAGGTAGCCAAAGATGTGTCTGTCAGATTACACCACGAACTCGAGACCGTGGAGGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000177034.2
CDS TCA 72 bp TTGAACTTGCTCAGCTCGTGGGTCAACTGCCGGTTGTaGTCTTCAATCTCAGAGATGGATCTCCTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LNLLSSWVNCRL*SSISEMDLLSS
Trigger: GCTGCTGAGGAGATCCATCTCTGAGATTGAAGATCACAACCGGCAGTTGACCCACGAGCTGAGCAAGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2
CDS CAA 72 bp CGTAGAGGTGGTCCTCCTCCATCTTACGGATCTTGTTaGTGTATGTCTCTGTCTCCTCTTGATGGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: RRGGPPPSYGSC*CMSLSPLDGVW
Trigger: CCAGACTCCATCAAGAGGAGACAGAGACATACACAAACAAGATCCGTAAGATGGAGGAGGACCACCTCTACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177034.2
CDS TCA 72 bp TGGCCATCTTTTTGCGCATCAGGGAAGCTTCCTCTTTaGCAAACTGAAGCTGACACTTCAAATCCGCACTGT +
Preference number: 6 (lower is better)
Translates to: WPSFCASGKLPL*QTEADTSNPHC
Trigger: ACAGTGCGGATTTGAAGTGTCAGCTTCAGTTTGTCAAAGAGGAAGCTTCCCTGATGCGCAAAAAGATGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086693.12
ENSMUST00000097291.10
ENSMUST00000145347.8
ENSMUST00000177034.2