Pregenerated sensors for MTCH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027282Ensembl transcript IDs: ENSMUST00000111467.4, ENSMUST00000111468.10, ENSMUST00000136872.8, ENSMUST00000150232.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGCCAGATGCACAGGCACAACCAAAGTTCTGCTGCCCTCTGGTaGTGGACAGGTTCTCACAGCCAGCGGTGCTCAGAACCGGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: AGQMHRHNQSSAALW*WTGSHSQRCSEPGS Trigger: GCTCCCCGGTTCTGAGCACCGCTGGCTGTGAGAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTGGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
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| 3UTR CCA 90 bp | TCAGCAGGCCAGATGCACAGGCACAACCAAAGTTCTGCTGCCCTCTaGTGGTGGACAGGTTCTCACAGCCAGCGGTGCTCAGAACCGGGG | + |
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Preference number: 1 (lower is better) Translates to: SAGQMHRHNQSSAAL*WWTGSHSQRCSEPG Trigger: CCCCGGTTCTGAGCACCGCTGGCTGTGAGAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTGGCCTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
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| 3UTR GCA 90 bp | ACCTTGGAGGCTGTGGGCACTGAGCACTCGGGGTGCTGCTGTGTGTaGTGCAGTGCTTGCTTCTCGTGCTACACGAGGCTAGGAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TLEAVGTEHSGCCCV*CSACFSCYTRLGAS Trigger: AGAAGCTCCTAGCCTCGTGTAGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCCCACAGCCTCCAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR GCA 90 bp | TTGGAGGCTGTGGGCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTaGAGTGCTTGCTTCTCGTGCTACACGAGGCTAGGAGCTTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LEAVGTEHSGCCCVC*SACFSCYTRLGASL Trigger: CAAAGAAGCTCCTAGCCTCGTGTAGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCCCACAGCCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR GCA 90 bp | CCTAGACCATTCAGCAGGCCAGATGCACAGGCACAACCAAAGTTCTaGTGCCCTCTGGTGGTGGACAGGTTCTCACAGCCAGCGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: PRPFSRPDAQAQPKF*CPLVVDRFSQPAVL Trigger: GAGCACCGCTGGCTGTGAGAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTGGCCTGCTGAATGGTCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
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| 3UTR GCA 90 bp | AGACCATTCAGCAGGCCAGATGCACAGGCACAACCAAAGTTCTGCTaGCCTCTGGTGGTGGACAGGTTCTCACAGCCAGCGGTGCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: RPFSRPDAQAQPKFC*PLVVDRFSQPAVLR Trigger: TCTGAGCACCGCTGGCTGTGAGAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTGGCCTGCTGAATGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
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| 3UTR TCA 90 bp | GACCCTGCGCGCTCACACTACCTAACATCATGGCCTCTGCTGCATTaGCAGAAGTCTAAAAGCAGCAAAGTCAGTGCTTACTCATTTGGC | + |
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Preference number: 1 (lower is better) Translates to: DPARSHYLTSWPLLH*QKSKSSKVSAYSFG Trigger: GCCAAATGAGTAAGCACTGACTTTGCTGCTTTTAGACTTCTGTCAATGCAGCAGAGGCCATGATGTTAGGTAGTGTGAGCGCGCAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR TCA 90 bp | TTCTGTAGGAACAGAAGGCAGAAATCTACAGTAACTCAGCAGCACTaGAAGGTAAGATGGGTCGGCTGCTTGGAAGCATGGTGGGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: FCRNRRQKSTVTQQH*KVRWVGCLEAWWEV Trigger: TACCTCCCACCATGCTTCCAAGCAGCCGACCCATCTTACCTTTCAGTGCTGCTGAGTTACTGTAGATTTCTGCCTTCTGTTCCTACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR TCA 90 bp | TGCTTCTTATTGGGGTTCTATTCTTCATTTGACAAAGCCCTAACCTaGGACTCAAATCTACATGAAAACCTGCTTGTTCCTTTAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: CFLLGFYSSFDKALT*DSNLHENLLVPLGK Trigger: TTTCCCTAAAGGAACAAGCAGGTTTTCATGTAGATTTGAGTCTCAGGTTAGGGCTTTGTCAAATGAAGAATAGAACCCCAATAAGAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCCAATGGGAGCCGCGGTaGGGCCAGACCTTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: ASLTLSGRRPCALTLPNIQWEPR*GQTLEA Trigger: AGCCTCCAAGGTCTGGCCTCACCGCGGCTCCCATTG...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGCACAGGCACAACCAAAGTTCTGCTGCCCTCTGGTGGTGGACAGGTTCCAATGGGAGCCGCGGTaGGGCCAGACCTTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PDAQAQPKFCCPLVVDRFQWEPR*GQTLEA Trigger: AGCCTCCAAGGTCTGGCCTCACCGCGGCTCCCATTG...GAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
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| 3UTR-3UTR GCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCGGGTGCTGCTGTGTGTaGTGCAGTGCTTGCTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: ASLTLSGRRPCALTLPNIGCCCV*CSACFS Trigger: CGAGAAGCAAGCACTGCAGCACACACAGCAGCACCC...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCTGGAGCTTCTTTGGAGTaGAAGGCCATCATACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: ALSTRGAAVCAAVLASRAGASLE*KAIILP Trigger: AGGGAGTATGATGGCCTTTCACTCCAAAGAAGCTCC...AGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCGGAGCTTCTTTGGAGTaGAAGGCCATCATACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: ASLTLSGRRPCALTLPNIGASLE*KAIILP Trigger: AGGGAGTATGATGGCCTTTCACTCCAAAGAAGCTCC...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCTGGCCTCTGCTGCATTaGCAGAAGTCTAAAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ASLTLSGRRPCALTLPNIWPLLH*QKSKSS Trigger: GCTGCTTTTAGACTTCTGTCAATGCAGCAGAGGCCA...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GGCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCGTTCTATTCTTCATTTaGCAAAGCCCTAACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: GTEHSGCCCVCCSACFSCVLFFI*QSPNLR Trigger: TCTCAGGTTAGGGCTTTGTCAAATGAAGAATAGAAC...GCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCTGTTCTATTCTTCATTTaGCAAAGCCCTAACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: ALSTRGAAVCAAVLASRAVLFFI*QSPNLR Trigger: TCTCAGGTTAGGGCTTTGTCAAATGAAGAATAGAAC...AGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACATGCCTAACTGAGGGTCTGACATTTGAGCTGGACAATATCCTAAGAACCCAATGGGAGCCGCGGTaGGGCCAGACCTTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FTCLTEGLTFELDNILRTQWEPR*GQTLEA Trigger: AGCCTCCAAGGTCTGGCCTCACCGCGGCTCCCATTG...GGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGCATGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCTAGACTCAAATCTACATaGAAACCTGCTTGTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: ALSTRGAAVCAAVLASRARLKST*KPACSF Trigger: AAAGGAACAAGCAGGTTTTCATGTAGATTTGAGTCT...AGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTGGTGAGGCCAGACCTTaGAGGCTGTGGGCACTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FGKVSGIDTTGLSHLMSIGEARP*RLWALS Trigger: GCTCAGTGCCCACAGCCTCCAAGGTCTGGCCTCACC...AATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACATGCCTAACTGAGGGTCTGACATTTGAGCTGGACAATATCCTAAGAACCGAGCACTCGGGGTGCTaGTGTGTGTGCTGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FTCLTEGLTFELDNILRTEHSGC*CVCCSA Trigger: AGCACTGCAGCACACACAGCAGCACCCCGAGTGCTC...GGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGCATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR GCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCAAGCAGCAAAGTCAGTaGTTACTCATTTGGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASLTLSGRRPCALTLPNIKQQSQ*LLIWQS Trigger: ACTTTGCCAAATGAGTAAGCACTGACTTTGCTGCTT...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR CCA 90 bp | TTTACATGCCTAACTGAGGGTCTGACATTTGAGCTGGACAATATCCTAAGAACCAGACCTTGGAGGCTGTaGGCACTGAGCACTCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FTCLTEGLTFELDNILRTRPWRL*ALSTRG Trigger: ACCCCGAGTGCTCAGTGCCCACAGCCTCCAAGGTCT...GGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGCATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGCACAGGCACAACCAAAGTTCTGCTGCCCTCTGGTGGTGGACAGGTTCAGACTCAAATCTACATaGAAACCTGCTTGTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: PDAQAQPKFCCPLVVDRFRLKST*KPACSF Trigger: AAAGGAACAAGCAGGTTTTCATGTAGATTTGAGTCT...GAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
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| 3UTR-3UTR GCA 90 bp | AACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGCTTAGGAGCAGAAGCTGCTGCTGTGTGTGCTaGAGTGCTTGCTTCTCGTGC | + |
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Preference number: 2 (lower is better) Translates to: NYSPSAVTRRKQTLRSRSCCCVC*SACFSC Trigger: GCACGAGAAGCAAGCACTGCAGCACACACAGCAGCA...GCTTCTGCTCCTAAGCGTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAGAGCACTCGGGGTGCTaGTGTGTGTGCTGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSSEIRPKLLTFCSNKKEEHSGC*CVCCSA Trigger: AGCACTGCAGCACACACAGCAGCACCCCGAGTGCTC...TTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTTTAACGAGCACTCGGGGTGCTaGTGTGTGTGCTGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QSIRNRHHRAFSSYEHFNEHSGC*CVCCSA Trigger: AGCACTGCAGCACACACAGCAGCACCCCGAGTGCTC...GTTAAAATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAAGACCTTGGAGGCTGTaGGCACTGAGCACTCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: VSSEIRPKLLTFCSNKKERPWRL*ALSTRG Trigger: ACCCCGAGTGCTCAGTGCCCACAGCCTCCAAGGTCT...TTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGGTGAGGCCAGACCTTaGAGGCTGTGGGCACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SEIRPKLLTFCSNKKETNGEARP*RLWALS Trigger: GCTCAGTGCCCACAGCCTCCAAGGTCTGGCCTCACC...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGACTAGTGGTTGCTGCTaGCTTTCTAGCATCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: ERPSYSLPSQSFLKPLYLTSGCC*LSSICL Trigger: TAGACAGATGCTAGAAAGTCAGCAGCAACCACTAGT...CAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGGTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGGTGTGCTGCAGTGCTTaGTTCTCGTGCTACACGAGG | + |
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Preference number: 2 (lower is better) Translates to: SRVSSEIRPKLLTFCSNKVCCSA*FSCYTR Trigger: CCTCGTGTAGCACGAGAAGCAAGCACTGCAGCACAC...CTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACACCCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACAGACCTTGGAGGCTGTaGGCACTGAGCACTCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SEIRPKLLTFCSNKKETNRPWRL*ALSTRG Trigger: ACCCCGAGTGCTCAGTGCCCACAGCCTCCAAGGTCT...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | AACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGCTTAGGAGCAGAAGCTTAAGCCTCTGTACCTaGCCTTCTTCTTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: NYSPSAVTRRKQTLRSRSLSLCT*PSSWWW Trigger: CCACCACCAAGAAGAAGGTCAGGTACAGAGGCTTAA...GCTTCTGCTCCTAAGCGTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTTTAACGTGTGCTGCAGTGCTTaGTTCTCGTGCTACACGAGG | + |
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Preference number: 2 (lower is better) Translates to: QSIRNRHHRAFSSYEHFNVCCSA*FSCYTR Trigger: CCTCGTGTAGCACGAGAAGCAAGCACTGCAGCACAC...GTTAAAATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACTGCTGCTGTGTGTGCTaGAGTGCTTGCTTCTCGTGC | + |
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Preference number: 2 (lower is better) Translates to: SEIRPKLLTFCSNKKETNCCCVC*SACFSC Trigger: GCACGAGAAGCAAGCACTGCAGCACACACAGCAGCA...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTTTAACGGAGCTTCTTTGGAGTaGAAGGCCATCATACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QSIRNRHHRAFSSYEHFNGASLE*KAIILP Trigger: AGGGAGTATGATGGCCTTTCACTCCAAAGAAGCTCC...GTTAAAATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGGTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGACTAGTGGTTGCTGCTaGCTTTCTAGCATCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SRVSSEIRPKLLTFCSNKTSGCC*LSSICL Trigger: TAGACAGATGCTAGAAAGTCAGCAGCAACCACTAGT...CTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACACCCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTATTGAAAGGCCTGAGTaGATAGGAAGGAGCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: FGKVSGIDTTGLSHLMSIIERPE*IGRSSM Trigger: CATTGAGCTCCTTCCTATTCACTCAGGCCTTTCAAT...AATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTGCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | AACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGCTTAGGAGCAGAAGCAGACTCAAATCTACATaGAAACCTGCTTGTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: NYSPSAVTRRKQTLRSRSRLKST*KPACSF Trigger: AAAGGAACAAGCAGGTTTTCATGTAGATTTGAGTCT...GCTTCTGCTCCTAAGCGTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACACTAGTGGTTGCTGCTaGCTTTCTAGCATCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SEIRPKLLTFCSNKKETNTSGCC*LSSICL Trigger: TAGACAGATGCTAGAAAGTCAGCAGCAACCACTAGT...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTAAGGAGCTCAATGCTTaGGTTGAAAATTTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: FGKVSGIDTTGLSHLMSIKELNA*VENFPS Trigger: AGAAGGAAAATTTTCAACTCAAGCATTGAGCTCCTT...AATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTGCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTCGAGTTGTCTCTTTGATAACTCGGTCAAAGGAGGATGAATATTCTTTTTGTAAGACTTTCCCATaGACCACAGTTCCAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: ISRVVSLITRSKEDEYSFCKTFP*TTVPRT Trigger: AGTCCTTGGAACTGTGGTCCATGGGAAAGTCTTACA...AAAAGAATATTCATCCTCCTTTGACCGAGTTATCAAAGAGACAACTCGAGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111468.10 |
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| 3UTR TCA 72 bp | GCCGCGGTGAGGCCAGACCTTGGAGGCTGTGGGCACTaGGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AAVRPDLGGCGH*ALGVLLCVLQC Trigger: GCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCCCACAGCCTCCAAGGTCTGGCCTCACCGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR GCA 72 bp | CAGACCTTGGAGGCTGTGGGCACTGAGCACTCGGGGTaGTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QTLEAVGTEHSG*CCVCCSACFSC Trigger: GCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCCCACAGCCTCCAAGGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR GCA 72 bp | GCTGTGGGCACTGAGCACTCGGGGTGCTGCTGTGTGTaGTGCAGTGCTTGCTTCTCGTGCTACACGAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: AVGTEHSGCCCV*CSACFSCYTRL Trigger: TAGCCTCGTGTAGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCCCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR GCA 72 bp | ACCTTGGAGGCTGTGGGCACTGAGCACTCGGGGTGCTaGTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLEAVGTEHSGC*CVCCSACFSCY Trigger: GTAGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCCCACAGCCTCCAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCTACCTGACCTTCTTCTaGGTGGTGGTGATGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GTEHSGCCCVCCSACFSCYLTFF*VVVMPF Trigger: GAAAGGCATCACCACCACCAAGAAGAAGGTCAGGTA...GCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR GCA 72 bp | CTGGTCGCATCCCTAACCCTGAGTGGGAGAAGACCCTaGGCGCTCACACTACCTAACATCATGGCCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVASLTLSGRRP*ALTLPNIMASA Trigger: AGCAGAGGCCATGATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGCGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR CCA 72 bp | CAGATGCACAGGCACAACCAAAGTTCTGCTGCCCTCTaGTGGTGGACAGGTTCTCACAGCCAGCGGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QMHRHNQSSAAL*WWTGSHSQRCS Trigger: TGAGCACCGCTGGCTGTGAGAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
||
| 3UTR GCA 72 bp | TTCAGCAGGCCAGATGCACAGGCACAACCAAAGTTCTaGTGCCCTCTGGTGGTGGACAGGTTCTCACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FSRPDAQAQPKF*CPLVVDRFSQP Trigger: TGGCTGTGAGAACCTGTCCACCACCAGAGGGCAGCAGAACTTTGGTTGTGCCTGTGCATCTGGCCTGCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136872.8 |
||
| 3UTR TCA 72 bp | AACAGAAGGCAGAAATCTACAGTAACTCAGCAGCACTaGAAGGTAAGATGGGTCGGCTGCTTGGAAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: NRRQKSTVTQQH*KVRWVGCLEAW Trigger: CCATGCTTCCAAGCAGCCGACCCATCTTACCTTTCAGTGCTGCTGAGTTACTGTAGATTTCTGCCTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR TCA 72 bp | CGCTCACACTACCTAACATCATGGCCTCTGCTGCATTaGCAGAAGTCTAAAAGCAGCAAAGTCAGTGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RSHYLTSWPLLH*QKSKSSKVSAY Trigger: GTAAGCACTGACTTTGCTGCTTTTAGACTTCTGTCAATGCAGCAGAGGCCATGATGTTAGGTAGTGTGAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTACATGCCTAACTGAGGGTCTGACATTTGAGCTGGACAATATCCTAAGAACCTACCTGACCTTCTTCTaGGTGGTGGTGATGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FTCLTEGLTFELDNILRTYLTFF*VVVMPF Trigger: GAAAGGCATCACCACCACCAAGAAGAAGGTCAGGTA...GGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGCATGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACTACCTGACCTTCTTCTaGGTGGTGGTGATGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SEIRPKLLTFCSNKKETNYLTFF*VVVMPF Trigger: GAAAGGCATCACCACCACCAAGAAGAAGGTCAGGTA...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR TCA 72 bp | TTGGGGTTCTATTCTTCATTTGACAAAGCCCTAACCTaGGACTCAAATCTACATGAAAACCTGCTTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGFYSSFDKALT*DSNLHENLLVP Trigger: AGGAACAAGCAGGTTTTCATGTAGATTTGAGTCTCAGGTTAGGGCTTTGTCAAATGAAGAATAGAACCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR TCA 72 bp | CTTATGAGCATTTTAACTGCCATTGAAAGGCCTGAGTaGATAGGAAGGAGCTCAATGCTTGAGTTGAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LMSILTAIERPE*IGRSSMLELKI Trigger: AATTTTCAACTCAAGCATTGAGCTCCTTCCTATTCACTCAGGCCTTTCAATGGCAGTTAAAATGCTCATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCGGCTCATATCCCACCTaGATGAGCACTTTCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTEHSGCCCVCCSACFSCGSYPT*MSTFTY Trigger: GTACGTGAAAGTGCTCATCCAGGTGGGATATGAGCC...GCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR TCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCAAGAGGCCAGGAAGCTaGCATACTTGTCGCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLTLSGRRPCALTLPNIKRPGS*HTCRPK Trigger: TTTTGGGCGACAAGTATGTCAGCTTCCTGGCCTCTT...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGGCACTTTCACGTACATaGGCGGCTGGGACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ERPSYSLPSQSFLKPLYLALSRT*AAGTGW Trigger: CCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGC...CAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCTGTAAGACTTTCCCATaGACCACAGTTCCAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASLTLSGRRPCALTLPNICKTFP*TTVPRT Trigger: AGTCCTTGGAACTGTGGTCCATGGGAAAGTCTTACA...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGCACGCCTCCCATCGATaGTTGCAATGTGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERPSYSLPSQSFLKPLYLHASHR*LQCAEH Trigger: ATGCTCAGCACATTGCAAGCATCGATGGGAGGCGTG...CAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCCCAAGAAGTGTATATTaGGGAATAAGGAGGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLTLSGRRPCALTLPNIPRSVY*GIRRRS Trigger: GGATCTCCTCCTTATTCCCCAATATACACTTCTTGG...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGACCGATGAGATAGGCCAGTaGGTTACACAGCCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPSYSLPSQSFLKPLYLTDEIGQ*VTQPQR Trigger: TCTTTGTGGCTGTGTAACTCACTGGCCTATCTCATC...GGTCAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGCCTCCCATCGATGCTTaGAATGTGCTGAGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERPSYSLPSQSFLKPLYLPPIDA*NVLSIA Trigger: TGCTATGCTCAGCACATTGCAAGCATCGATGGGAGG...CAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGCAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTGCACTTTCACGTACATaGGCGGCTGGGACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FGKVSGIDTTGLSHLMSIALSRT*AAGTGW Trigger: CCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGC...AATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTGCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGACTCCTGGTAATACTGTAAGACTTTCCCATGGACCACAGTTCCAAGGACCTCCCATCGATGCTTaGAATGTGCTGAGCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQTPGNTVRLSHGPQFQGPPIDA*NVLSWM Trigger: CATCCAGCTCAGCACATTGCAAGCATCGATGGGAGG...TCCTTGGAACTGTGGTCCATGGGAAAGTCTTACAGTATTACCAGGAGTCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111468.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGACCGGTAGATGGTTACTATaGAGTCACACAGTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPSYSLPSQSFLKPLYLTGRWLL*SHTVHS Trigger: ACTGTGGACTGTGTGACTCCATAGTAACCATCTACC...GGTCAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR CAA 72 bp | CAAAGCTTCCTTAAGCCTCTGTACCTGACCTTCTTCTaGGTGGTGGTGATGCCTTTCCCTTCTGTAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QSFLKPLYLTFF*VVVMPFPSVGT Trigger: TGTTCCTACAGAAGGGAAAGGCATCACCACCACCAAGAAGAAGGTCAGGTACAGAGGCTTAAGGAAGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACCTGACCTTCTTCTTGGTGGTGGTGATGCCTTTCCCTTCTGTAGGAACAGGTAGATGGTTACTATaGAGTCACACAGTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLTFFLVVVMPFPSVGTGRWLL*SHTVHS Trigger: ACTGTGGACTGTGTGACTCCATAGTAACCATCTACC...TGTTCCTACAGAAGGGAAAGGCATCACCACCACCAAGAAGAAGGTCAGGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGGGTAGATGGTTACTATaGAGTCACACAGTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERPSYSLPSQSFLKPLYLGRWLL*SHTVHS Trigger: ACTGTGGACTGTGTGACTCCATAGTAACCATCTACC...CAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGCACTTTCACGTACATaGGCGGCTGGGACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SEIRPKLLTFCSNKKETNALSRT*AAGTGW Trigger: CCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGC...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR GCA 90 bp | TTTACATGCCTAACTGAGGGTCTGACATTTGAGCTGGACAATATCCTAAGAACCCACGCCTCCCATCGATaGTTGCAATGTGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTCLTEGLTFELDNILRTHASHR*LQCAEH Trigger: ATGCTCAGCACATTGCAAGCATCGATGGGAGGCGTG...GGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGCATGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAAAGTCAGTGCTTACTCATTTGGCAAAGTATCAGGAATCGACACCACAGCTCAGAGTGATCACGTaGAAGGGATGTGTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAKSVLTHLAKYQESTPQLRVIT*KGCVMR Trigger: CCTCATTACACATCCCTTCCACGTGATCACTCTGAG...CTGTGGTGTCGATTCCTGATACTTTGCCAAATGAGTAAGCACTGACTTTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGACTCCTGGTAATACTGTAAGACTTTCCCATGGACCACAGTTCCAAGGATGCAATGTGCTGAGCTaGATGAGCACTTTCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQTPGNTVRLSHGPQFQGCNVLS*MSTFTY Trigger: GTACGTGAAAGTGCTCATCCAGCTCAGCACATTGCA...TCCTTGGAACTGTGGTCCATGGGAAAGTCTTACAGTATTACCAGGAGTCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111468.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCGAGTTGTCTCTTTGATAACTCGGTCAAAGGAGGATGAATATTCTTTTGCACTTTCACGTACATaGGCGGCTGGGACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISRVVSLITRSKEDEYSFALSRT*AAGTGW Trigger: CCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGC...AAAAGAATATTCATCCTCCTTTGACCGAGTTATCAAAGAGACAACTCGAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111468.10 |
||
| CDS-3UTR GCA 90 bp | TTTACATGCCTAACTGAGGGTCTGACATTTGAGCTGGACAATATCCTAAGAACCCCTCCCATCGATGCTTaGAATGTGCTGAGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTCLTEGLTFELDNILRTPPIDA*NVLSIA Trigger: TGCTATGCTCAGCACATTGCAAGCATCGATGGGAGG...GGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGCATGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAACACGCCTCCCATCGATaGTTGCAATGTGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSEIRPKLLTFCSNKKEHASHR*LQCAEH Trigger: ATGCTCAGCACATTGCAAGCATCGATGGGAGGCGTG...TTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGCAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTGATGAGATAGGCCAGTaGGTTACACAGCCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGKVSGIDTTGLSHLMSIDEIGQ*VTQPQR Trigger: TCTTTGTGGCTGTGTAACTCACTGGCCTATCTCATC...AATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTGCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCTCGAGTTGTCTCTTTGATAACTCGGTCAAAGGAGGATGAATATTCTTTTCACGCCTCCCATCGATaGTTGCAATGTGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISRVVSLITRSKEDEYSFHASHR*LQCAEL Trigger: CAGCTCAGCACATTGCAAGCATCGATGGGAGGCGTG...AAAAGAATATTCATCCTCCTTTGACCGAGTTATCAAAGAGACAACTCGAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111468.10 |
||
| CDS-3UTR CCA 90 bp | GTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAGGCTCATATCCCACCTaGATGAGCACTTTCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSEIRPKLLTFCSNKKEGSYPT*MSTFTY Trigger: GTACGTGAAAGTGCTCATCCAGGTGGGATATGAGCC...TTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGCAAAGTATCAGGAATCGACACCACAGGGCTTTCTCATCTTATGAGCATTCTCAGAGTGATCACGTaGAAGGGATGTGTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FGKVSGIDTTGLSHLMSILRVIT*KGCVMR Trigger: CCTCATTACACATCCCTTCCACGTGATCACTCTGAG...AATGCTCATAAGATGAGAAAGCCCTGTGGTGTCGATTCCTGATACTTTGCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGGGTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGCTCAGAGTGATCACGTaGAAGGGATGTGTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRVSSEIRPKLLTFCSNKLRVIT*KGCVMR Trigger: CCTCATTACACATCCCTTCCACGTGATCACTCTGAG...CTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACACCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | AACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGCTTAGGAGCAGAAGCCCAAGAAGTGTATATTaGGGAATAAGGAGGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NYSPSAVTRRKQTLRSRSPRSVY*GIRRRS Trigger: GGATCTCCTCCTTATTCCCCAATATACACTTCTTGG...GCTTCTGCTCCTAAGCGTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| 3UTR CAA 72 bp | AGAAGTCTAAAAGCAGCAAAGTCAGTGCTTACTCATTaGGCAAAGTATCAGGAATCGACACCACAGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSLKAAKSVLTH*AKYQESTPQGF Trigger: AAAGCCCTGTGGTGTCGATTCCTGATACTTTGCCAAATGAGTAAGCACTGACTTTGCTGCTTTTAGACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGATGAGATAGGCCAGTaGGTTACACAGCCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEIRPKLLTFCSNKKETNDEIGQ*VTQPQR Trigger: TCTTTGTGGCTGTGTAACTCACTGGCCTATCTCATC...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAATGTAAGACTTTCCCATaGACCACAGTTCCAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VSSEIRPKLLTFCSNKKECKTFP*TTVPRT Trigger: AGTCCTTGGAACTGTGGTCCATGGGAAAGTCTTACA...TTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACTGTAAGACTTTCCCATaGACCACAGTTCCAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: SEIRPKLLTFCSNKKETNCKTFP*TTVPRT Trigger: AGTCCTTGGAACTGTGGTCCATGGGAAAGTCTTACA...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACCCAAGAAGTGTATATTaGGGAATAAGGAGGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: SEIRPKLLTFCSNKKETNPRSVY*GIRRRS Trigger: GGATCTCCTCCTTATTCCCCAATATACACTTCTTGG...GTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCTAACCCTGAGTGGGAGAAGACCCTGCGCGCTCACACTACCTAACATCGCCTCCCATCGATGCTaGCAATGTGCTGAGCATAGC | + |
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Preference number: 5 (lower is better) Translates to: ASLTLSGRRPCALTLPNIASHRC*QCAEHS Trigger: GCTATGCTCAGCACATTGCAAGCATCGATGGGAGGC...GATGTTAGGTAGTGTGAGCGCGCAGGGTCTTCTCCCACTCAGGGTTAGGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | AGGCCATCATACTCCCTTCCTTCCCAAAGCTTCCTTAAGCCTCTGTACCTGACCGCCTCCCATCGATGCTaGCAATGTGCTGAGCATAGC | + |
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Preference number: 5 (lower is better) Translates to: RPSYSLPSQSFLKPLYLTASHRC*QCAEHS Trigger: GCTATGCTCAGCACATTGCAAGCATCGATGGGAGGC...GGTCAGGTACAGAGGCTTAAGGAAGCTTTGGGAAGGAAGGGAGTATGATGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | GCACTGAGCACTCGGGGTGCTGCTGTGTGTGCTGCAGTGCTTGCTTCTCGTGCTTCCAAGAAGTGTATATaGGGGAATAAGGAGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: ALSTRGAAVCAAVLASRASKKCI*GNKEEI Trigger: GATCTCCTCCTTATTCCCCAATATACACTTCTTGGA...AGCACGAGAAGCAAGCACTGCAGCACACACAGCAGCACCCCGAGTGCTCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | CTGTACCTGACCTTCTTCTTGGTGGTGGTGATGCCTTTCCCTTCTGTAGGAACAGCCTCCCATCGATGCTaGCAATGTGCTGAGCATAGC | + |
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Preference number: 5 (lower is better) Translates to: LYLTFFLVVVMPFPSVGTASHRC*QCAEHS Trigger: GCTATGCTCAGCACATTGCAAGCATCGATGGGAGGC...TGTTCCTACAGAAGGGAAAGGCATCACCACCACCAAGAAGAAGGTCAGGTACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | TCTCAGACTCCTGGTAATACTGTAAGACTTTCCCATGGACCACAGTTCCAAGGAGCCTCCCATCGATGCTaGCAATGTGCTGAGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SQTPGNTVRLSHGPQFQGASHRC*QCAELD Trigger: ATCCAGCTCAGCACATTGCAAGCATCGATGGGAGGC...TCCTTGGAACTGTGGTCCATGGGAAAGTCTTACAGTATTACCAGGAGTCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111468.10 |
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| CDS-3UTR CAA 90 bp | CTGTACCTGACCTTCTTCTTGGTGGTGGTGATGCCTTTCCCTTCTGTAGGAACATCTCGAGTTGTCTCTTaGATAACTCGGTCAAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LYLTFFLVVVMPFPSVGTSRVVS*ITRSKE Trigger: CTCCTTTGACCGAGTTATCAAAGAGACAACTCGAGA...TGTTCCTACAGAAGGGAAAGGCATCACCACCACCAAGAAGAAGGTCAGGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | AACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGCTTAGGAGCAGAAGCTCTCGAGTTGTCTCTTaGATAACTCGGTCAAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: NYSPSAVTRRKQTLRSRSSRVVS*ITRSKE Trigger: CTCCTTTGACCGAGTTATCAAAGAGACAACTCGAGA...GCTTCTGCTCCTAAGCGTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | AACTACTCACCTTCTGCAGTAACAAGAAGGAAACAAACGCTTAGGAGCAGAAGCTCCAAGAAGTGTATATaGGGGAATAAGGAGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: NYSPSAVTRRKQTLRSRSSKKCI*GNKEEI Trigger: GATCTCCTCCTTATTCCCCAATATACACTTCTTGGA...GCTTCTGCTCCTAAGCGTTTGTTTCCTTCTTGTTACTGCAGAAGGTGAGTAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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| CDS-3UTR CAA 90 bp | TCAAGGGTGTCATCAGAAATAAGACCCAAACTACTCACCTTCTGCAGTAACAAGTCCAAGAAGTGTATATaGGGGAATAAGGAGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: SRVSSEIRPKLLTFCSNKSKKCI*GNKEEI Trigger: GATCTCCTCCTTATTCCCCAATATACACTTCTTGGA...CTTGTTACTGCAGAAGGTGAGTAGTTTGGGTCTTATTTCTGATGACACCCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111467.4 ENSMUST00000136872.8 ENSMUST00000150232.8 |
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