Pregenerated sensors for MTCH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024012Ensembl transcript IDs: ENSMUST00000095427.12, ENSMUST00000118366.9, ENSMUST00000153658.3, ENSMUST00000234129.2, ENSMUST00000234180.2, ENSMUST00000234416.2, ENSMUST00000234507.2, ENSMUST00000234970.2, ENSMUST00000235021.2, ENSMUST00000235088.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGGCAGGATGAGCTGGGCTAGAGGTGCAGGGAAGCCTTGCCACTaGGTGACGTTTGCCTCTGCAGCCTGCCTCTGCCTGAGTACAAGA | + |
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Preference number: 1 (lower is better) Translates to: TGRMSWARGAGKPCH*VTFASAACLCLSTR Trigger: TCTTGTACTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACTCAGTGGCAAGGCTTCCCTGCACCTCTAGCCCAGCTCATCCTGCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR TCA 90 bp | CACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCTaGGGAGAACATGATTTCCTATTCAGGAGAAGGCACCACCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: HTWRHQHRQADEGMV*GEHDFLFRRRHHPG Trigger: CCCTGGGTGGTGCCTTCTCCTGAATAGGAAATCATGTTCTCCTCAGACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234129.2 |
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| 3UTR CCA 90 bp | ACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATaGTCTGAGGAGAACATGATTTCCTATTCAGGAGAAGGCACCACC | + |
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Preference number: 1 (lower is better) Translates to: TLTPGVTSTDKQMRG*SEENMISYSGEGTT Trigger: GGTGGTGCCTTCTCCTGAATAGGAAATCATGTTCTCCTCAGACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR TCA 90 bp | CACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCTaGGGAGAACATGATTTCCTATTCAGGAGAAGGCACCACCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: HTWRHQHRQADEGMV*GEHDFLFRRRHHPC Trigger: ACAAGGGTGGTGCCTTCTCCTGAATAGGAAATCATGTTCTCCTCAGACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR GCA 90 bp | CGTTCTAGCGTTCTTCTGACAAATAAGCTCACTGGACTTCTTGCTTaGTTGCTTTTCCTTAGCTTTGAAAACTCCTTGGCAAACTCAACT | + |
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Preference number: 1 (lower is better) Translates to: RSSVLLTNKLTGLLA*LLFLSFENSLANST Trigger: AGTTGAGTTTGCCAAGGAGTTTTCAAAGCTAAGGAAAAGCAAGCAAGCAAGAAGTCCAGTGAGCTTATTTGTCAGAAGAACGCTAGAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGCCTTGCCACTGAGTGACGTTTGCCTCTGCAGCCTGCCTCTGCCTGAGTCCCCAGGTCCCAGGTaGCCCACCTCCACCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: REALPLSDVCLCSLPLPESPGPR*PTSTSP Trigger: TGGGCTGGTGGAGGTGGGTCACCTGGGACCTGGGGA...CTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACTCAGTGGCAAGGCTTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGGGAACATAGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTATCCCCAGGTCCCAGGTaGCCCACCTCCACCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: VGNIAPASHGPGVMAPNLSPGPR*PTSTSP Trigger: TGGGCTGGTGGAGGTGGGTCACCTGGGACCTGGGGA...TAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCTATGTTCCCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | GTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGAGCTCCAGCCTCCCATaGCCCAGGTGTGATGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: VFAPSTVTEPSHLASPAQSSSLP*PRCDGA Trigger: GGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCT...CTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCAAGCTCCAGCCTCCCATaGCCCAGGTGTGATGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: NLCVFAPSTVTEPSHLASSSSLP*PRCDGA Trigger: GGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCT...TGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAGCCTTGCCACTGAGTGACGTTTGCCTCTGCAGCCTGCCTCTGCCTGAGCCACTGAGTGACGTTTaGCTCTGCAGCCTGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: REALPLSDVCLCSLPLPEPLSDV*LCSLPL Trigger: CAGAGGCAGGCTGCAGAGGCAAACGTCACTCAGTGG...CTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACTCAGTGGCAAGGCTTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTCTGCCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATAGCTCCAGCCTCCCATaGCCCAGGTGTGATGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: LPLPEYKMDSSTSRQEGDSSSLP*PRCDGA Trigger: GGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCT...ATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGGCAGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGCCTTGCCACTGAGTGACGTTTGCCTCTGCAGCCTGCCTCTGCCTGAGTGGCAAATATGGACATaGAGCCAGGCTGGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: REALPLSDVCLCSLPLPEWQIWT*SQAGLE Trigger: CTCCAGCCCAGCCTGGCTTCATGTCCATATTTGCCA...CTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACTCAGTGGCAAGGCTTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACAAAGCAGGAAGTGGCAGCCTGCCTCTGCCTaGGTACAAGATGGACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PASHGPGVMAPNLQSRKWQPASA*VQDGLQ Trigger: CTGGAGTCCATCTTGTACTCAGGCAGAGGCAGGCTG...CCACTTCCTGCTTTGTAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGCAGCCTGCCTCTGCCTaGGTACAAGATGGACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VFAPSTVTEPSHLASPAQQPASA*VQDGLQ Trigger: CTGGAGTCCATCTTGTACTCAGGCAGAGGCAGGCTG...CTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCACCCCAGAAGCCAGGCTGGGCTaGAGTCACCCTTGGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: PEYKMDSSTSRQEGDATPEARLG*SHPWAS Trigger: AGATGCCCAAGGGTGACTCCAGCCCAGCCTGGCTTC...TGGGGTGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCACCGACATGAAGCCAGGCTaGGCTGGAGTCACCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPEYKMDSSTSRQEGDATDMKPG*AGVTLG Trigger: CCCAAGGGTGACTCCAGCCCAGCCTGGCTTCATGTC...GGTGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCAGACATGAAGCCAGGCTaGGCTGGAGTCACCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: NLCVFAPSTVTEPSHLASDMKPG*AGVTLG Trigger: CCCAAGGGTGACTCCAGCCCAGCCTGGCTTCATGTC...TGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | GTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGTTACAAAGCAGGAAGTaGGGGGCGGGGGTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VFAPSTVTEPSHLASPAQLQSRK*GAGVLL Trigger: CAGAAGCACCCCCGCCCCCCACTTCCTGCTTTGTAA...CTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACTCGCACCCAGCACAGTaGCTGAACCCTCACACCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLCNLCVFAPSTVTEPSHSHPAQ*LNPHTW Trigger: CCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGA...GTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGGAACATAGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTAAGTGACGTTTGCCTCTaGAGCCTGCCTCTGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VGNIAPASHGPGVMAPNLSDVCL*SLPLPE Trigger: CTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACT...TAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCTATGTTCCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGGAACATAGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACCACTGAGTGACGTTTaGCTCTGCAGCCTGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VGNIAPASHGPGVMAPNLPLSDV*LCSLPL Trigger: CAGAGGCAGGCTGCAGAGGCAAACGTCACTCAGTGG...TAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCTATGTTCCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACGACATGAAGCCAGGCTaGGCTGGAGTCACCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLCNLCVFAPSTVTEPSHDMKPG*AGVTLG Trigger: CCCAAGGGTGACTCCAGCCCAGCCTGGCTTCATGTC...GTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | GTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCAGACATGAAGCCAGGCTaGGCTGGAGTCACCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: VGLCNLCVFAPSTVTEPSDMKPG*AGVTLG Trigger: CCCAAGGGTGACTCCAGCCCAGCCTGGCTTCATGTC...TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACAAAGCAGGAAACTGGCAGGATGAGCTaGGCTAGAGGTGCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SSSLPWPRCDGAQFTKQETGRMS*ARGAGK Trigger: CTTCCCTGCACCTCTAGCCCAGCTCATCCTGCCAGT...TTCCTGCTTTGTAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGACGTTTGCCTCTGCAGCCTGCCTCTGCCTGAGTACAAGATGGACTCCAGTCTTGGGCATCTGAGATaGTGGGTCCTCACCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SDVCLCSLPLPEYKMDSSLGHLR*WVLTRG Trigger: ACCCCTGGTGAGGACCCATCATCTCAGATGCCCAAG...ACTGGAGTCCATCTTGTACTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCACCCCAGGCTGGAGTCACCCTTaGGCATCTGAGATGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: PEYKMDSSTSRQEGDATPGWSHP*ASEMMG Trigger: ACCCATCATCTCAGATGCCCAAGGGTGACTCCAGCC...TGGGGTGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | GTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCAACTGGCAGGATGAGCTaGGCTAGAGGTGCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VGLCNLCVFAPSTVTEPSTGRMS*ARGAGK Trigger: CTTCCCTGCACCTCTAGCCCAGCTCATCCTGCCAGT...TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTCTGCCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATTTACAAAGCAGGAAGTaGGGGGCGGGGGTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LPLPEYKMDSSTSRQEGDLQSRK*GAGVLL Trigger: CAGAAGCACCCCCGCCCCCCACTTCCTGCTTTGTAA...ATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGGCAGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | CTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGCTTGGGCATCTGAGATaGTGGGTCCTCACCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LCNLCVFAPSTVTEPSHLLGHLR*WVLTRG Trigger: ACCCCTGGTGAGGACCCATCATCTCAGATGCCCAAG...CAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | TTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGCTTGGGCATCTGAGATaGTGGGTCCTCACCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FEEMGLSYHEGRTRCRPMLGHLR*WVLTRG Trigger: ACCCCTGGTGAGGACCCATCATCTCAGATGCCCAAG...CATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGTTACAAAGCAGGAAGTaGGGGGCGGGGGTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCNLCVFAPSTVTEPSHLLQSRK*GAGVLL Trigger: CAGAAGCACCCCCGCCCCCCACTTCCTGCTTTGTAA...CAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACTTGGGCATCTGAGATaGTGGGTCCTCACCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LDVGLCNLCVFAPSTVTELGHLR*WVLTRG Trigger: ACCCCTGGTGAGGACCCATCATCTCAGATGCCCAAG...TTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR TCA 90 bp | ATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTTCCCCAGGTCCCAGGTaGCCCACCTCCACCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: IHLFEEMGLSYHEGRTRCSPGPR*PTSTSP Trigger: TGGGCTGGTGGAGGTGGGTCACCTGGGACCTGGGGA...ACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGGCTGGAGTCACCCTTaGGCATCTGAGATGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: LCNLCVFAPSTVTEPSHLGWSHP*ASEMMG Trigger: ACCCATCATCTCAGATGCCCAAGGGTGACTCCAGCC...CAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGGAACATAGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTAGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
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Preference number: 2 (lower is better) Translates to: VGNIAPASHGPGVMAPNLGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...TAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCTATGTTCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGATGTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAAGGCTGGAGTCACCCTTaGGCATCTGAGATGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: LDVGLCNLCVFAPSTVTEGWSHP*ASEMMG Trigger: ACCCATCATCTCAGATGCCCAAGGGTGACTCCAGCC...TTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTGGCTGGAGTCACCCTTaGGCATCTGAGATGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: LFEEMGLSYHEGRTRCRPGWSHP*ASEMMG Trigger: ACCCATCATCTCAGATGCCCAAGGGTGACTCCAGCC...AGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| 3UTR-3UTR CCA 90 bp | CAATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATAGCTCCAGCCTCCCATaGCCCAGGTGTGATGGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: QYIYSRRWVYLTTRGGLDSSSLP*PRCDGA Trigger: GGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCT...ATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACCCTTGTATAAGAAAATTAGTGTTGGGAACATAGCTCCAGCCTCCCATGGCCAGCCTGCCTCTGCCTaGGTACAAGATGGACTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PPLYKKISVGNIAPASHGQPASA*VQDGLQ Trigger: CTGGAGTCCATCTTGTACTCAGGCAGAGGCAGGCTG...GCCATGGGAGGCTGGAGCTATGTTCCCAACACTAATTTTCTTATACAAGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR TCA 90 bp | TACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCTCGCACCCAGCACAGTaGCTGAACCCTCACACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YIYSRRWVYLTTRGGLDVSHPAQ*LNPHTW Trigger: CCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGA...GACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACCCTTGTATAAGAAAATTAGTGTTGGGAACATAGCTCCAGCCTCCCATGGCAGTGACGTTTGCCTCTaGAGCCTGCCTCTGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PPLYKKISVGNIAPASHGSDVCL*SLPLPE Trigger: CTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACT...GCCATGGGAGGCTGGAGCTATGTTCCCAACACTAATTTTCTTATACAAGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCAGGTCTGAGGAGAACATaGTTTCCTATTCAGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VGLCNLCVFAPSTVTEPSGLRRT*FPIQEK Trigger: CTTCTCCTGAATAGGAAATCATGTTCTCCTCAGACC...TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR TCA 90 bp | ATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTTCGCACCCAGCACAGTaGCTGAACCCTCACACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: IHLFEEMGLSYHEGRTRCSHPAQ*LNPHTW Trigger: CCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGA...ACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR TCA 90 bp | CAATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATTCGCACCCAGCACAGTaGCTGAACCCTCACACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QYIYSRRWVYLTTRGGLDSHPAQ*LNPHTW Trigger: CCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGA...ATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR GCA 90 bp | GTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACTGGACTTCTTGCTTaGTTGCTTTTCCTTAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VFAPSTVTEPSHLASPAQTGLLA*LLFLSF Trigger: AAAGCTAAGGAAAAGCAAGCAAGCAAGAAGTCCAGT...CTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| 3UTR-3UTR GCA 90 bp | GATTTCCTATTCAGGAGAAGGCACCACCCTTGTATAAGAAAATTAGTGTTGGGAAGTGACGTTTGCCTCTaGAGCCTGCCTCTGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DFLFRRRHHPCIRKLVLGSDVCL*SLPLPE Trigger: CTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACT...TCCCAACACTAATTTTCTTATACAAGGGTGGTGCCTTCTCCTGAATAGGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR GCA 90 bp | TCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGTGACTTCTTGCTTGCTTaGTTTTCCTTAGCTTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SRRWVYLTTRGGLDVGLCDFLLA*FSLALK Trigger: TTTCAAAGCTAAGGAAAAGCAAGCAAGCAAGAAGTC...ACATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| 3UTR-3UTR TCA 90 bp | TACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGTCTGAGGAGAACATaGTTTCCTATTCAGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YIYSRRWVYLTTRGGLDVGLRRT*FPIQEK Trigger: CTTCTCCTGAATAGGAAATCATGTTCTCCTCAGACC...GACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR TCA 72 bp | GCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTaGCTGAACCCTCACACCTGGCGTCACCAGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: AYVTCAYSHPAQ*LNPHTWRHQHR Trigger: TCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| 3UTR CCA 72 bp | TTTGCCTCTGCAGCCTGCCTCTGCCTGAGTACAAGATaGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FASAACLCLSTR*TPVPLGRKGMP Trigger: TGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGGCAGAGGCAGGCTGCAGAGGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR GCA 72 bp | ACGAGGGGAGGACTAGATGTCGGCCTATGTAACCTGTaGGTATTCGCACCCAGCACAGTGACTGAACCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TRGGLDVGLCNL*VFAPSTVTEPS Trigger: TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATCTAGTCCTCCCCTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| 3UTR CCA 72 bp | CCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATaGTCTGAGGAGAACATGATTTCCAGGGGTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PGVTSTDKQMRG*SEENMISRGRL Trigger: TAGCCTACCCCTGGAAATCATGTTCTCCTCAGACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234970.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCAGAGAAGGCACCACCCTaGTATAAGAAAATTAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CVFAPSTVTEPSHLASPAEKAPP*YKKISV Trigger: AACACTAATTTTCTTATACAAGGGTGGTGCCTTCTC...TGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCTGCTTTTCCTTAGCTTaGAAAACTCCTTGGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LNPHTWRHQHRQADEGMVCFSLA*KTPWQT Trigger: AGTTTGCCAAGGAGTTTTCAAAGCTAAGGAAAAGCA...GACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGGAACATAGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTAGGACTTCTTGCTTGCTaGCTTTTCCTTAGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGNIAPASHGPGVMAPNLGLLAC*LFLSFE Trigger: TTCAAAGCTAAGGAAAAGCAAGCAAGCAAGAAGTCC...TAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCTATGTTCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| 3UTR TCA 72 bp | CGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCTaGGGAGAACATGATTTCCTATTCAGGAGAAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RHQHRQADEGMV*GEHDFLFRRRH Trigger: GTGCCTTCTCCTGAATAGGAAATCATGTTCTCCTCAGACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCACCCCAGAGAAGGCACCACCCTaGTATAAGAAAATTAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PEYKMDSSTSRQEGDATPEKAPP*YKKISV Trigger: AACACTAATTTTCTTATACAAGGGTGGTGCCTTCTC...TGGGGTGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTAGCTCACTGGACTTCTaGCTTGCTTGCTTTTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: IHLFEEMGLSYHEGRTRCSSLDF*LACFSL Trigger: TAAGGAAAAGCAAGCAAGCAAGAAGTCCAGTGAGCT...ACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| 3UTR TCA 72 bp | GCTGTCTCTTTTGGTAAAAACGTTCTAGCGTTCTTCTaGCAAATAAGCTCACTGGACTTCTTGCTTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: AVSFGKNVLAFF*QISSLDFLLAC Trigger: GCAAGCAAGCAAGAAGTCCAGTGAGCTTATTTGTCAGAAGAACGCTAGAACGTTTTTACCAAAAGAGACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
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| 3UTR-3UTR CAA 90 bp | CAATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGAGAAGGCACCACCCTaGTATAAGAAAATTAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QYIYSRRWVYLTTRGGLDEKAPP*YKKISV Trigger: AACACTAATTTTCTTATACAAGGGTGGTGCCTTCTC...ATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| CDS-3UTR TCA 90 bp | GCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGAGCAGCGGGTGACTaGGAGCCGTCACGCCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: APSTVTEPSHLASPAQTSRAAGD*EPSRPR Trigger: GCGCGGGCGTGACGGCTCTCAGTCACCCGCTGCTCT...GCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 |
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| CDS-3UTR CCA 90 bp | GCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCCGAACAGCGCCTCGGTaGTCGGGGCGTTGTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: APSTVTEPSHLASPAQTSRTAPR*SGRCPR Trigger: CCGGGGACAACGCCCCGACCACCGAGGCGCTGTTCG...GCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACAAAGCAGGAAGTGGAGAGCAGCGGGTGACTaGGAGCCGTCACGCCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PASHGPGVMAPNLQSRKWRAAGD*EPSRPR Trigger: GCGCGGGCGTGACGGCTCTCAGTCACCCGCTGCTCT...CCACTTCCTGCTTTGTAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 |
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| CDS-3UTR TCA 90 bp | TTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGAGCAGCGGGTGACTaGGAGCCGTCACGCCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FAPSTVTEPSHLASPAQTRAAGD*EPSRPR Trigger: GCGCGGGCGTGACGGCTCTCAGTCACCCGCTGCTCT...TGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 |
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| 3UTR CAA 72 bp | TTCTTCATGCTGCCGCGGGTCACAGTGGACAAGGCGTaGGACATAAGGCGGGGGCTCAGGCCCCGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFMLPRVTVDKA*DIRRGLRPRKS Trigger: GCTCTTCCGGGGCCTGAGCCCCCGCCTTATGTCCAACGCCTTGTCCACTGTGACCCGCGGCAGCATGAAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234180.2 ENSMUST00000234416.2 |
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| CDS-3UTR TCA 90 bp | GCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCGGGGGCATCGGCTCATaGCCCACCTGGATCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: APSTVTEPSHLASPAQTSGGIGS*PTWISS Trigger: GCTGCTGATCCAGGTGGGTCATGAGCCGATGCCCCC...GCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000235021.2 |
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| CDS-3UTR CCA 90 bp | CTCACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCTGAGGAGGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTPGVTSTDKQMRGWSEEEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...CTCCTCAGACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235088.2 |
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| CDS-3UTR CCA 90 bp | TTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FAPSTVTEPSHLASPAQTEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...TGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CCA 90 bp | CTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LCVFAPSTVTEPSHLASPEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...TGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACAAAGCAGGAAGTGGGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PASHGPGVMAPNLQSRKWEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...CCACTTCCTGCTTTGTAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATGTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACGAACAGCGCCTCGGTaGTCGGGGCGTTGTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDVGLCNLCVFAPSTVTERTAPR*SGRCPR Trigger: CCGGGGACAACGCCCCGACCACCGAGGCGCTGTTCG...TTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 |
||
| CDS-3UTR CCA 90 bp | TGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACATTGGTCCCAAGGGTaGGGGGCATCGGCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVFAPSTVTEPSHLASPAHWSQG*GASAHD Trigger: GTCATGAGCCGATGCCCCCCACCCTTGGGACCAATG...TGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000235021.2 |
||
| 3UTR CAA 72 bp | GGGGAATACGGAGGGAGTCCAGCCCGCAGCCCACAGTaGTTCACTGCCATGAGATCTCCAACGAGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEYGGSPARSPQ*FTAMRSPTSRK Trigger: CTTCCTGCTCGTTGGAGATCTCATGGCAGTGAACAACTGTGGGCTGCGGGCTGGACTCCCTCCGTATTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| CDS-3UTR TCA 90 bp | GCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCACATCGCCCAGGAGGTaGGGGATTAAGCCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: APSTVTEPSHLASPAQTSTSPRR*GIKPTK Trigger: CTTCGTTGGCTTAATCCCTCACCTCCTGGGCGATGT...GCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCACCCCACATTGGTCCCAAGGGTaGGGGGCATCGGCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PEYKMDSSTSRQEGDATPHWSQG*GASAHD Trigger: GTCATGAGCCGATGCCCCCCACCCTTGGGACCAATG...TGGGGTGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234416.2 |
||
| CDS-3UTR CCA 90 bp | GCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGGGCCTGGCTAAACTaGGAACCTGGATTCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: APSTVTEPSHLASPAQTSRAWLN*EPGFWS Trigger: CGACCAGAATCCAGGTTCCCAGTTTAGCCAGGCCCT...GCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCNLCVFAPSTVTEPSHEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...GTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | GTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCAGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VGLCNLCVFAPSTVTEPSEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | TTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAACATCGCCCAGGAGGTaGGGGATTAAGCCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FAPSTVTEPSHLASPAQTTSPRR*GIKPTK Trigger: CTTCGTTGGCTTAATCCCTCACCTCCTGGGCGATGT...TGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAACATCGCCCAGGAGGTaGGGGATTAAGCCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVFAPSTVTEPSHLASPTSPRR*GIKPTK Trigger: CTTCGTTGGCTTAATCCCTCACCTCCTGGGCGATGT...TGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | GTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACATTGGTCCCAAGGGTaGGGGGCATCGGCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGLCNLCVFAPSTVTEPSHWSQG*GASAHD Trigger: GTCATGAGCCGATGCCCCCCACCCTTGGGACCAATG...TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000235021.2 |
||
| CDS-3UTR CCA 90 bp | CTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCAGGGCCTGGCTAAACTaGGAACCTGGATTCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNPHTWRHQHRQADEGMVRAWLN*EPGFWS Trigger: CGACCAGAATCCAGGTTCCCAGTTTAGCCAGGCCCT...GACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 |
||
| CDS-3UTR CCA 90 bp | TTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FEEMGLSYHEGRTRCRPMEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...CATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | TCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGTCGGATGGCCAGGGCCTaGCTAAAGCTGTCGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRRWVYLTTRGGLDVGLCRMARA*LKLSST Trigger: GGTGGACGACAGCTTTAGCCAGGCCCTGGCCATCCG...ACATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234970.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGGAACATAGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTAACATCGCCCAGGAGGTaGGGGATTAAGCCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGNIAPASHGPGVMAPNLTSPRR*GIKPTK Trigger: CTTCGTTGGCTTAATCCCTCACCTCCTGGGCGATGT...TAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCTATGTTCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACAAAGCAGGACATCGCCCAGGAGGTaGGGGATTAAGCCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAPASHGPGVMAPNLQSRTSPRR*GIKPTK Trigger: CTTCGTTGGCTTAATCCCTCACCTCCTGGGCGATGT...CCTGCTTTGTAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | CTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCAGTGGATCCAGGACTTaGACACAGGGGAATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNPHTWRHQHRQADEGMVSGSRT*TQGNTE Trigger: CTCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACT...GACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATGTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACGGATGGCCAGGGCCTaGCTAAAGCTGTCGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LDVGLCNLCVFAPSTVTERMARA*LKLSST Trigger: GGTGGACGACAGCTTTAGCCAGGCCCTGGCCATCCG...TTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234970.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | ATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTAGAGCAGCGGGTGACTaGGAGCCGTCACGCCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IHLFEEMGLSYHEGRTRCRAAGD*EPSRPR Trigger: GCGCGGGCGTGACGGCTCTCAGTCACCCGCTGCTCT...ACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 |
||
| CDS-3UTR TCA 90 bp | AGTGACGTTTGCCTCTGCAGCCTGCCTCTGCCTGAGTACAAGATGGACTCCAGTACATCGCCCAGGAGGTaGGGGATTAAGCCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDVCLCSLPLPEYKMDSSTSPRR*GIKPTK Trigger: CTTCGTTGGCTTAATCCCTCACCTCCTGGGCGATGT...ACTGGAGTCCATCTTGTACTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCACCCCAAGTGGATCCAGGACTTaGACACAGGGGAATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEYKMDSSTSRQEGDATPSGSRT*TQGNTE Trigger: CTCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACT...TGGGGTGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | GATGTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCAGTGGATCCAGGACTTaGACACAGGGGAATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DVGLCNLCVFAPSTVTEPSGSRT*TQGNTE Trigger: CTCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACT...GGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | TTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FAPSTVTEPSHLASPAQTGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...TGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACAAAGCAGGAAGTGGGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PASHGPGVMAPNLQSRKWGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...CCACTTCCTGCTTTGTAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | GTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VFAPSTVTEPSHLASPAQGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...CTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | CTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LNPHTWRHQHRQADEGMVGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...GACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | TTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGAGGGCCTGGCTAAACTaGGAACCTGGATTCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FEEMGLSYHEGRTRCRPMRAWLN*EPGFWS Trigger: CGACCAGAATCCAGGTTCCCAGTTTAGCCAGGCCCT...CATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 |
||
| 3UTR CAA 72 bp | GTCCTCACCAGGGGTAGGCTAAGACCCCATAAATGTTaGGTCGGGCAGCTTAGGTTACTCCAGGGCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTRGRLRPHKC*VGQLRLLQGKA Trigger: TGCTTTGCCCTGGAGTAACCTAAGCTGCCCGACCAAACATTTATGGGGTCTTAGCCTACCCCTGGTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| CDS-3UTR TCA 90 bp | GATGTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTGTACTTGGCATAGGTaGAGAAGCTCGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVGLCNLCVFAPSTVTEPCTWHR*RSSAGR Trigger: TCTACCTGCCGAGCTTCTTCACCTATGCCAAGTACA...GGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTACATCGCCCAGGAGGTaGGGGATTAAGCCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFEEMGLSYHEGRTRCRPTSPRR*GIKPTK Trigger: CTTCGTTGGCTTAATCCCTCACCTCCTGGGCGATGT...AGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | CTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGAGTGGATCCAGGACTTaGACACAGGGGAATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCNLCVFAPSTVTEPSHLSGSRT*TQGNTE Trigger: CTCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACT...CAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | AACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCAGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NLCVFAPSTVTEPSHLASGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...TGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCAACTCAGCAGCTGGAATaGATAGGTGAAGAAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLSTRWTPVPLGRKGMPTQQLE*IGEEAR Trigger: CCGAGCTTCTTCACCTATGCATTCCAGCTGCTGAGT...TGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234416.2 |
||
| CDS-3UTR CCA 90 bp | TACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCCGGATGGCCAGGGCCTaGCTAAAGCTGTCGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YIYSRRWVYLTTRGGLDVRMARA*LKLSST Trigger: GGTGGACGACAGCTTTAGCCAGGCCCTGGCCATCCG...GACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234970.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | TCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGTTGTACTTGGCATAGGTaGAGAAGCTCGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRRWVYLTTRGGLDVGLCCTWHR*RSSAGR Trigger: TCTACCTGCCGAGCTTCTTCACCTATGCCAAGTACA...ACATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | TTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGTGTACTTGGCATAGGTaGAGAAGCTCGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FEEMGLSYHEGRTRCRPMCTWHR*RSSAGR Trigger: TCTACCTGCCGAGCTTCTTCACCTATGCCAAGTACA...CATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | CTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGTGTACTTGGCATAGGTaGAGAAGCTCGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCNLCVFAPSTVTEPSHLCTWHR*RSSAGR Trigger: TCTACCTGCCGAGCTTCTTCACCTATGCCAAGTACA...CAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | TATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTAAGTGGATCCAGGACTTaGACACAGGGGAATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSRRWVYLTTRGGLDVGLSGSRT*TQGNTE Trigger: CTCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACT...TAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTAGTGGATCCAGGACTTaGACACAGGGGAATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFEEMGLSYHEGRTRCRPSGSRT*TQGNTE Trigger: CTCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACT...AGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | GTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCAGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLCNLCVFAPSTVTEPSGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR CCA 90 bp | ATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTGAGCCGCGGAAGAGCTaGCCCTGCACACTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IHLFEEMGLSYHEGRTRCEPRKS*PCTLRY Trigger: GTACCTGAGTGTGCAGGGCCAGCTCTTCCGCGGCTC...ACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
||
| CDS-3UTR GCA 90 bp | GTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGATTCGCGATACACACTaGATCATCATCTCATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFAPSTVTEPSHLASPAQIRDTH*IIISYD Trigger: ATCGTATGAGATGATGATGCAGTGTGTATCGCGAAT...CTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR GCA 90 bp | CTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCAGATGAGGGGATGGTCATTCGCGATACACACTaGATCATCATCTCATACGAT | + |
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Preference number: 4 (lower is better) Translates to: LNPHTWRHQHRQADEGMVIRDTH*IIISYD Trigger: ATCGTATGAGATGATGATGCAGTGTGTATCGCGAAT...GACCATCCCCTCATCTGCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR GCA 90 bp | TTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAATTCGCGATACACACTaGATCATCATCTCATACGAT | + |
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Preference number: 4 (lower is better) Translates to: FAPSTVTEPSHLASPAQTIRDTH*IIISYD Trigger: ATCGTATGAGATGATGATGCAGTGTGTATCGCGAAT...TGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATGCCACCCCAATTCGCGATACACACTaGATCATCATCTCATACGAT | + |
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Preference number: 4 (lower is better) Translates to: PEYKMDSSTSRQEGDATPIRDTH*IIISYD Trigger: ATCGTATGAGATGATGATGCAGTGTGTATCGCGAAT...TGGGGTGGCATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| CDS-3UTR GCA 90 bp | TATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTAGGTCAGCATGCTCACTaGAATCCCCATCACAAACTT | + |
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Preference number: 4 (lower is better) Translates to: YSRRWVYLTTRGGLDVGLGQHAH*NPHHKL Trigger: AAGTTTGTGATGGGGATTGCAGTGAGCATGCTGACC...TAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CCA 90 bp | GATTTCCTATTCAGGAGAAGGCACCACCCTTGTATAAGAAAATTAGTGTTGGGACGGATGGCCAGGGCCTaGCTAAAGCTGTCGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: DFLFRRRHHPCIRKLVLGRMARA*LKLSST Trigger: GGTGGACGACAGCTTTAGCCAGGCCCTGGCCATCCG...TCCCAACACTAATTTTCTTATACAAGGGTGGTGCCTTCTCCTGAATAGGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118366.9 ENSMUST00000235088.2 |
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| CDS-3UTR CCA 90 bp | CAATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATAGGGCCTGGCTAAACTaGGAACCTGGATTCTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: QYIYSRRWVYLTTRGGLDRAWLN*EPGFWS Trigger: CGACCAGAATCCAGGTTCCCAGTTTAGCCAGGCCCT...ATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 |
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| CDS-3UTR TCA 90 bp | CAATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATAGTGGATCCAGGACTTaGACACAGGGGAATACGGAG | + |
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Preference number: 4 (lower is better) Translates to: QYIYSRRWVYLTTRGGLDSGSRT*TQGNTE Trigger: CTCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACT...ATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR TCA 90 bp | CAATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATTGTACTTGGCATAGGTaGAGAAGCTCGGCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QYIYSRRWVYLTTRGGLDCTWHR*RSSAGR Trigger: TCTACCTGCCGAGCTTCTTCACCTATGCCAAGTACA...ATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR GCA 90 bp | ATACATTTATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTATTCGCGATACACACTaGATCATCATCTCATACGAT | + |
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Preference number: 4 (lower is better) Translates to: IHLFEEMGLSYHEGRTRCIRDTH*IIISYD Trigger: ATCGTATGAGATGATGATGCAGTGTGTATCGCGAAT...ACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATAAATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | GTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGGCCCGCAGCCCACAGTaGTTCACTGCCATGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: VFAPSTVTEPSHLASPAQARSPQ*FTAMRS Trigger: AGATCTCATGGCAGTGAACAACTGTGGGCTGCGGGC...CTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | AACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCAGCCCGCAGCCCACAGTaGTTCACTGCCATGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: NLCVFAPSTVTEPSHLASARSPQ*FTAMRS Trigger: AGATCTCATGGCAGTGAACAACTGTGGGCTGCGGGC...TGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | GCACCCAGCACAGTGACTGAACCCTCACACCTGGCGTCACCAGCACAGACAAGCCAGTGGATCCAGGACTaGAACACAGGGGAATACGGA | + |
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Preference number: 5 (lower is better) Translates to: APSTVTEPSHLASPAQTSQWIQD*NTGEYG Trigger: TCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACTG...GCTTGTCTGTGCTGGTGACGCCAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGCCTTGCCACTGAGTGACGTTTGCCTCTGCAGCCTGCCTCTGCCTGAGCAGTGGATCCAGGACTaGAACACAGGGGAATACGGA | + |
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Preference number: 5 (lower is better) Translates to: REALPLSDVCLCSLPLPEQWIQD*NTGEYG Trigger: TCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACTG...CTCAGGCAGAGGCAGGCTGCAGAGGCAAACGTCACTCAGTGGCAAGGCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | CTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACACCTGGCCCGCAGCCCACAGTaGTTCACTGCCATGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: LCNLCVFAPSTVTEPSHLARSPQ*FTAMRS Trigger: AGATCTCATGGCAGTGAACAACTGTGGGCTGCGGGC...CAGGTGTGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | TCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTATGTGCCCGCAGCCCACAGTaGTTCACTGCCATGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: SRRWVYLTTRGGLDVGLCARSPQ*FTAMRS Trigger: AGATCTCATGGCAGTGAACAACTGTGGGCTGCGGGC...ACATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCAGCCTCCCATGGCCCAGGTGTGATGGCGCCCAATTTACAAAGCAGGAACAGTGGATCCAGGACTaGAACACAGGGGAATACGGA | + |
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Preference number: 5 (lower is better) Translates to: SSSLPWPRCDGAQFTKQEQWIQD*NTGEYG Trigger: TCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACTG...TTCCTGCTTTGTAAATTGGGCGCCATCACACCTGGGCCATGGGAGGCTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | GTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCTCACAGTGGATCCAGGACTaGAACACAGGGGAATACGGA | + |
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Preference number: 5 (lower is better) Translates to: VGLCNLCVFAPSTVTEPSQWIQD*NTGEYG Trigger: TCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACTG...TGAGGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTCTGCCTGAGTACAAGATGGACTCCAGTACCTCTAGGCAGGAAGGGGATCAGTGGATCCAGGACTaGAACACAGGGGAATACGGA | + |
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Preference number: 5 (lower is better) Translates to: LPLPEYKMDSSTSRQEGDQWIQD*NTGEYG Trigger: TCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACTG...ATCCCCTTCCTGCCTAGAGGTACTGGAGTCCATCTTGTACTCAGGCAGAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | GATGTCGGCCTATGTAACCTGTGCGTATTCGCACCCAGCACAGTGACTGAACCCCAGTGGATCCAGGACTaGAACACAGGGGAATACGGA | + |
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Preference number: 5 (lower is better) Translates to: DVGLCNLCVFAPSTVTEPQWIQD*NTGEYG Trigger: TCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACTG...GGGTTCAGTCACTGTGCTGGGTGCGAATACGCACAGGTTACATAGGCCGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | TATTCGAGGAGATGGGTCTATCTTACCACGAGGGGAGGACTAGATGTCGGCCTACAGTGGATCCAGGACTaGAACACAGGGGAATACGGA | + |
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Preference number: 5 (lower is better) Translates to: YSRRWVYLTTRGGLDVGLQWIQD*NTGEYG Trigger: TCCGTATTCCCCTGTGTTCAAGTCCTGGATCCACTG...TAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCCATCTCCTCGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234507.2 ENSMUST00000234970.2 ENSMUST00000235021.2 ENSMUST00000235088.2 |
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| CDS-3UTR CAA 90 bp | GATTTCCTATTCAGGAGAAGGCACCACCCTTGTATAAGAAAATTAGTGTTGGGAGCCCGCAGCCCACAGTaGTTCACTGCCATGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: DFLFRRRHHPCIRKLVLGARSPQ*FTAMRS Trigger: AGATCTCATGGCAGTGAACAACTGTGGGCTGCGGGC...TCCCAACACTAATTTTCTTATACAAGGGTGGTGCCTTCTCCTGAATAGGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000234507.2 ENSMUST00000235088.2 |
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| CDS TCA 72 bp | CCTGGATCAGCAGCTTCACGTAGAGCAGCGGGTGACTaGGAGCCGTCACGCCCGCGCCCAGCGCCACGAACA | + |
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Preference number: 6 (lower is better) Translates to: PGSAASRRAAGD*EPSRPRPAPRT Trigger: TGTTCGTGGCGCTGGGCGCGGGCGTGACGGCTCTCAGTCACCCGCTGCTCTACGTGAAGCTGCTGATCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 |
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| CDS TCA 72 bp | GCTGGATCAGCAGCTTCACGTAGAGCAGCGGGTGACTaGGAGCCGTCACGCCCGCGCCCAGCGCCACGAACA | + |
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Preference number: 6 (lower is better) Translates to: AGSAASRRAAGD*EPSRPRPAPRT Trigger: TGTTCGTGGCGCTGGGCGCGGGCGTGACGGCTCTCAGTCACCCGCTGCTCTACGTGAAGCTGCTGATCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234180.2 |
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| CDS CCA 72 bp | AGAGGACCTTCCTCCCCAGCACATTGGTCCCAAGGGTaGGGGGCATCGGCTCATGACCCACCTGGATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RGPSSPAHWSQG*GASAHDPPGSA Trigger: TGCTGATCCAGGTGGGTCATGAGCCGATGCCCCCCACCCTTGGGACCAATGTGCTGGGGAGGAAGGTCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000095427.12 ENSMUST00000118366.9 ENSMUST00000153658.3 ENSMUST00000234129.2 ENSMUST00000234416.2 ENSMUST00000235021.2 |
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