Pregenerated sensors for MTBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022369Ensembl transcript IDs: ENSMUST00000022998.14, ENSMUST00000169517.2, ENSMUST00000169667.2, ENSMUST00000170046.8
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCCGCGGTGGTACAGGCCTGCAATCCCTCAGCACCTAGGAGGTaGAGGTGCAAGGAGCGCCTTGAGTTCCAGGCCAGCCTGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LAAVVQACNPSAPRR*RCKERLEFQASLGW Trigger: CCAGCCCAGGCTGGCCTGGAACTCAAGGCGCTCCTTGCACCTCCACCTCCTAGGTGCTGAGGGATTGCAGGCCTGTACCACCGCGGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 90 bp | GTCCTTCCTCACCAAACCTGCAGGGCTACTGTGAATCCAAGCGGCTaGTGCATCAGGCTAAGGTCACTGGGTTATCCTGACTCGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: VLPHQTCRATVNPSG*CIRLRSLGYPDSAS Trigger: GGAGGCCGAGTCAGGATAACCCAGTGACCTTAGCCTGATGCAGCAGCCGCTTGGATTCACAGTAGCCCTGCAGGTTTGGTGAGGAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 90 bp | CTTCCTCACCAAACCTGCAGGGCTACTGTGAATCCAAGCGGCTGCTaGATCAGGCTAAGGTCACTGGGTTATCCTGACTCGGCCTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LPHQTCRATVNPSGC*IRLRSLGYPDSASL Trigger: AAGGGAGGCCGAGTCAGGATAACCCAGTGACCTTAGCCTGATGCAGCAGCCGCTTGGATTCACAGTAGCCCTGCAGGTTTGGTGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 90 bp | CCACCCACTGGTCTAATGGTCAGTCACAGCCCTGAGACTCAGCATTaGTTCCATGGAAATGGGCAGAGTCTGCCACAGGGTTGGCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: PPTGLMVSHSPETQH*FHGNGQSLPQGWPL Trigger: TAAAGGCCAACCCTGTGGCAGACTCTGCCCATTTCCATGGAACCAATGCTGAGTCTCAGGGCTGTGACTGACCATTAGACCAGTGGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 90 bp | GATTTAGATACCGGAGGGTCTAACTTACTGTGGGCGGTGCTCCTCTaGCGGGTCCTGGAGGTTCTAAGAAAACAGGCTGAGCAATCCATG | + |
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Preference number: 1 (lower is better) Translates to: DLDTGGSNLLWAVLL*RVLEVLRKQAEQSM Trigger: CATGGATTGCTCAGCCTGTTTTCTTAGAACCTCCAGGACCCGCCAGAGGAGCACCGCCCACAGTAAGTTAGACCCTCCGGTATCTAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR TCA 90 bp | CTCCTTCATAGTTTCTGCTTCAGTTCCTGCCTCAGGTTCCTCCTCTaGGTTCCCTCACTATGGACTTTGCAGAAGTATAAGCCTAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLHSFCFSSCLRFLL*VPSLWTLQKYKPSC Trigger: GCAGCTAGGCTTATACTTCTGCAAAGTCCATAGTGAGGGAACTCAGAGGAGGAACCTGAGGCAGGAACTGAAGCAGAAACTATGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 90 bp | TACAGGACACCATGGACCCTCCTTACAAATGAGGCATCTGCTCTTTaGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: YRTPWTLLTNEASAL*GKFTGCVQFSKERG Trigger: CCCCCTTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCATTTGTAAGGAGGGTCCATGGTGTCCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| 3UTR CCA 90 bp | ATTTTCTTGAGTGATGATTTAGATACCGGAGGGTCTAACTTACTGTaGGCGGTGCTCCTCTGGCGGGTCCTGGAGGTTCTAAGAAAACAG | + |
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Preference number: 1 (lower is better) Translates to: IFLSDDLDTGGSNLL*AVLLWRVLEVLRKQ Trigger: CTGTTTTCTTAGAACCTCCAGGACCCGCCAGAGGAGCACCGCCCACAGTAAGTTAGACCCTCCGGTATCTAAATCATCACTCAAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR TCA 90 bp | ATGTCTATCATTGCTCTACCAGGAGCGGGAAGCTTGTCTGATAACTaGTGCAAATTTTCTGCTGATTCTTCATATAGGTCAGCCAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: MSIIALPGAGSLSDN*CKFSADSSYRSAKG Trigger: ACCCTTGGCTGACCTATATGAAGAATCAGCAGAAAATTTGCATCAGTTATCAGACAAGCTTCCCGCTCCTGGTAGAGCAATGATAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR GCA 90 bp | TTTCTGCTGATTCTTCATATAGGTCAGCCAAGGGTAAGGATTCCCTaGTATTACTGTCATCTTCTTCAAAACACTCAACAGCACTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: FLLILHIGQPRVRIP*YYCHLLQNTQQHSD Trigger: GTCAGAGTGCTGTTGAGTGTTTTGAAGAAGATGACAGTAATAGCAGGGAATCCTTACCCTTGGCTGACCTATATGAAGAATCAGCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR TCA 90 bp | CTGACAATTTATCTCACAGTAACTTCCTGCTATGATAACTTTTGCTaGATGCCATTCCTTCAGATGTTTCAAGGCCCCTACAATGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LTIYLTVTSCYDNFC*MPFLQMFQGPYNGQ Trigger: TTGCCCATTGTAGGGGCCTTGAAACATCTGAAGGAATGGCATTCAGCAAAAGTTATCATAGCAGGAAGTTACTGTGAGATAAATTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCGCGGTGGTACAGGCCTGCAATCCCTCAGCACCTAGGAGGTGGAGGTGCCAGAGTGAACAGACGTaGAATGCAGAGCTGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: LAAVVQACNPSAPRRWRCQSEQT*NAELET Trigger: TGTTTCCAGCTCTGCATTCCACGTCTGTTCACTCTG...GCACCTCCACCTCCTAGGTGCTGAGGGATTGCAGGCCTGTACCACCGCGGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGCAATCCCTCAGCACCTAGGAGGTGGAGGTGCAAGGAGCGCCTTGAGTTCAGCATTGGTTCCATaGAAATGGGCAGAGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RPAIPQHLGGGGARSALSSALVP*KWAESA Trigger: GGCAGACTCTGCCCATTTCCATGGAACCAATGCTGA...ACTCAAGGCGCTCCTTGCACCTCCACCTCCTAGGTGCTGAGGGATTGCAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGTGAATCCAAGCGGCTGCTGCCCTGAGACTCAGCATTaGTTCCATGGAAATGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QVLPHQTCRATVNPSGCCPETQH*FHGNGQ Trigger: CTGCCCATTTCCATGGAACCAATGCTGAGTCTCAGG...GCAGCAGCCGCTTGGATTCACAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTCCTGCCTCAGGTTCCTCCTCTGAGTTCCCTCACTATGGACTTTGCAGAAGTCTGCCACAGGGTTaGCCTTTACATGGTGACGTG | + |
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Preference number: 2 (lower is better) Translates to: SVPASGSSSEFPHYGLCRSLPQG*PLHGDV Trigger: CACGTCACCATGTAAAGGCCAACCCTGTGGCAGACT...TCTGCAAAGTCCATAGTGAGGGAACTCAGAGGAGGAACCTGAGGCAGGAACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CAA 90 bp | AAGGCCCCTACAATGGGCAAGCACTCTTTTAGCTTAGGAGGGTCTTaGTCAGAAGGCAACAGTATTATGTCTATCATTGCTCTACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KAPTMGKHSFSLGGS*SEGNSIMSIIALPG Trigger: TCCTGGTAGAGCAATGATAGACATAATACTGTTGCCTTCTGACAAAGACCCTCCTAAGCTAAAAGAGTGCTTGCCCATTGTAGGGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAAAAAGGCAATGACGAGACAGGCTAAGTCTGTCCTTTCTCCATTTGTTTATTTGGTTCCATGGAAATaGGCAGAGTCTGCCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: PKKAMTRQAKSVLSPFVYLVPWK*AESATG Trigger: CCCTGTGGCAGACTCTGCCCATTTCCATGGAACCAA...ATAAACAAATGGAGAAAGGACAGACTTAGCCTGTCTCGTCATTGCCTTTTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR-3UTR TCA 90 bp | AATGCCATTCCTTCAGATGTTTCAAGGCCCCTACAATGGGCAAGCACTCTTTTACACTCAACAGCACTCTaGCATTCTTCTATATTTGCT | + |
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Preference number: 2 (lower is better) Translates to: NAIPSDVSRPLQWASTLLHSTAL*HSSIFA Trigger: AGCAAATATAGAAGAATGTCAGAGTGCTGTTGAGTG...TAAAAGAGTGCTTGCCCATTGTAGGGGCCTTGAAACATCTGAAGGAATGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTCAGAAGGCAACAGTATTATGTCTATCATTGCTCTACCAGGAGCGGGAAAGGGTAAGGATTCCCTaGTATTACTGTCATCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LCQKATVLCLSLLYQERERVRIP*YYCHLL Trigger: AAGAAGATGACAGTAATAGCAGGGAATCCTTACCCT...TTCCCGCTCCTGGTAGAGCAATGATAGACATAATACTGTTGCCTTCTGACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR-3UTR TCA 90 bp | AATGCCATTCCTTCAGATGTTTCAAGGCCCCTACAATGGGCAAGCACTCTTTTAAGCTTGTCTGATAACTaGTGCAAATTTTCTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: NAIPSDVSRPLQWASTLLSLSDN*CKFSAD Trigger: ATCAGCAGAAAATTTGCATCAGTTATCAGACAAGCT...TAAAAGAGTGCTTGCCCATTGTAGGGGCCTTGAAACATCTGAAGGAATGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR-3UTR GCA 90 bp | CTATGGACTTTGCAGAAGTATAAGCCTAGCTGCTTTCAGTCAGTAATTTATCCTTTGTTTATGATGGGATaGCACCCACAGGATAAAACT | + |
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Preference number: 2 (lower is better) Translates to: LWTLQKYKPSCFQSVIYPLFMMG*HPQDKT Trigger: AGTTTTATCCTGTGGGTGGCATCCCATCATAAACAA...AGGATAAATTACTGACTGAAAGCAGCTAGGCTTATACTTCTGCAAAGTCCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 72 bp | GTGGTACAGGCCTGCAATCCCTCAGCACCTAGGAGGTaGAGGTGCAAGGAGCGCCTTGAGTTCCAGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VVQACNPSAPRR*RCKERLEFQAS Trigger: GCTGGCCTGGAACTCAAGGCGCTCCTTGCACCTCCACCTCCTAGGTGCTGAGGGATTGCAGGCCTGTACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 72 bp | GACACGAAGCATTCGAGTCAAGGTACCTGGCCGCGGTaGTACAGGCCTGCAATCCCTCAGCACCTAGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: DTKHSSQGTWPR*YRPAIPQHLGG Trigger: ACCTCCTAGGTGCTGAGGGATTGCAGGCCTGTACCACCGCGGCCAGGTACCTTGACTCGAATGCTTCGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 72 bp | ACCGGAGGGTCTAACTTACTGTGGGCGGTGCTCCTCTaGCGGGTCCTGGAGGTTCTAAGAAAACAGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TGGSNLLWAVLL*RVLEVLRKQAE Trigger: CTCAGCCTGTTTTCTTAGAACCTCCAGGACCCGCCAGAGGAGCACCGCCCACAGTAAGTTAGACCCTCCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | CACCAAACCTGCAGGGCTACTGTGAATCCAAGCGGCTaGTGCATCAGGCTAAGGTCACTGGGTTATCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: HQTCRATVNPSG*CIRLRSLGYPD Trigger: GTCAGGATAACCCAGTGACCTTAGCCTGATGCAGCAGCCGCTTGGATTCACAGTAGCCCTGCAGGTTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 72 bp | TGGTTCCATGGAAATGGGCAGAGTCTGCCACAGGGTTaGCCTTTACATGGTGACGTGCAGAGTGAACAGACG | + |
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Preference number: 3 (lower is better) Translates to: WFHGNGQSLPQG*PLHGDVQSEQT Trigger: CGTCTGTTCACTCTGCACGTCACCATGTAAAGGCCAACCCTGTGGCAGACTCTGCCCATTTCCATGGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | AGAGTCTGCCACAGGGTTGGCCTTTACATGGTGACGTaGAGAGTGAACAGACGTGGAATGCAGAGCTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RVCHRVGLYMVT*RVNRRGMQSWK Trigger: TTTCCAGCTCTGCATTCCACGTCTGTTCACTCTGCACGTCACCATGTAAAGGCCAACCCTGTGGCAGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | AGACTCAGCATTGGTTCCATGGAAATGGGCAGAGTCTaGCACAGGGTTGGCCTTTACATGGTGACGTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RLSIGSMEMGRV*HRVGLYMVTCR Trigger: TCTGCACGTCACCATGTAAAGGCCAACCCTGTGGCAGACTCTGCCCATTTCCATGGAACCAATGCTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | GTCTCCAGAGGAAGTGCTGCACTGCGTTCTGCAGAATaGTTCACTCAGCAAGCCCTTAGAGCTTCCACACAA | + |
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Preference number: 3 (lower is better) Translates to: VSRGSAALRSAE*FTQQALRASTQ Trigger: TTGTGTGGAAGCTCTAAGGGCTTGCTGAGTGAAGCATTCTGCAGAACGCAGTGCAGCACTTCCTCTGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 72 bp | TGGCCTTTACATGGTGACGTGCAGAGTGAACAGACGTaGAATGCAGAGCTGGAAACAAGATGCACTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: WPLHGDVQSEQT*NAELETRCTPA Trigger: TGCTGGAGTGCATCTTGTTTCCAGCTCTGCATTCCACGTCTGTTCACTCTGCACGTCACCATGTAAAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | AGTGAACAGACGTGGAATGCAGAGCTGGAAACAAGATaGACTCCAGCAAGGCCAGTAAACCCAGCAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SEQTWNAELETR*TPARPVNPAKQ Trigger: TTGCTTTGCTGGGTTTACTGGCCTTGCTGGAGTGCATCTTGTTTCCAGCTCTGCATTCCACGTCTGTTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | AGCAAATACACAGAATCAGGTCTCCAGAGGAAGTGCTaGACTGCGTTCTGCAGAATGCTTCACTCAGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: SKYTESGLQRKC*TAFCRMLHSAS Trigger: GCTTGCTGAGTGAAGCATTCTGCAGAACGCAGTGCAGCACTTCCTCTGGAGACCTGATTCTGTGTATTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | GTGAGCAAATACACAGAATCAGGTCTCCAGAGGAAGTaGTGCACTGCGTTCTGCAGAATGCTTCACTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: VSKYTESGLQRK*CTAFCRMLHSA Trigger: TGCTGAGTGAAGCATTCTGCAGAACGCAGTGCAGCACTTCCTCTGGAGACCTGATTCTGTGTATTTGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR CCA 72 bp | CCATGGACCCTCCTTACAAATGAGGCATCTGCTCTTTaGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: PWTLLTNEASAL*GKFTGCVQFSK Trigger: CTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCATTTGTAAGGAGGGTCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| 3UTR TCA 72 bp | AAACTAATTTCAAATCCAAACTTTCGTTCCCGCATCTaGATCTCTCCCCGCCACAGTTCCCTCGGATCAATG | + |
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Preference number: 3 (lower is better) Translates to: KLISNPNFRSRI*ISPRHSSLGSM Trigger: CATTGATCCGAGGGAACTGTGGCGGGGAGAGATTCAGATGCGGGAACGAAAGTTTGGATTTGAAATTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR CCA 72 bp | CTGAGTGTCACAAAACTATATAGATACAGGACACCATaGACCCTCCTTACAAATGAGGCATCTGCTCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: LSVTKLYRYRTP*TLLTNEASALW Trigger: CCAAAGAGCAGATGCCTCATTTGTAAGGAGGGTCCATGGTGTCCTGTATCTATATAGTTTTGTGACACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| 3UTR-3UTR CAA 90 bp | GCTATGATAACTTTTGCTGAATGCCATTCCTTCAGATGTTTCAAGGCCCCTACAAGCTTAGGAGGGTCTTaGTCAGAAGGCAACAGTATT | + |
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Preference number: 3 (lower is better) Translates to: AMITFAECHSFRCFKAPTSLGGS*SEGNSI Trigger: AATACTGTTGCCTTCTGACAAAGACCCTCCTAAGCT...TGTAGGGGCCTTGAAACATCTGAAGGAATGGCATTCAGCAAAAGTTATCATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
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| 3UTR CCA 72 bp | ATGAGCTACAGTCATCGGGGAAGAGGAAACCTCAACTaGGAAAATATCTCTAACAGATATGGCTGTAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: MSYSHRGRGNLN*ENISNRYGCKQ Trigger: TTGCTTACAGCCATATCTGTTAGAGATATTTTCCCAGTTGAGGTTTCCTCTTCCCCGATGACTGTAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | CCCTCACTATGGACTTTGCAGAAGTATAAGCCTAGCTaGTTTCAGTCAGTAATTTATCCTGGCAATAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: PSLWTLQKYKPS*FQSVIYPGNRN Trigger: GTTTCTATTGCCAGGATAAATTACTGACTGAAAGCAGCTAGGCTTATACTTCTGCAAAGTCCATAGTGAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| 3UTR GCA 72 bp | CTAAGTCTGTCCTTTCTCCATTTGTTTATGATGGGATaGCACCCACAGGATAAAACTATGAGACTGAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LSLSFLHLFMMG*HPQDKTMRLSK Trigger: TTTACTCAGTCTCATAGTTTTATCCTGTGGGTGGCATCCCATCATAAACAAATGGAGAAAGGACAGACTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGTGAATCCAAGCGGCTGCTGCGGGATGTCGCCTCAGTaGCAGGCTCGATCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QVLPHQTCRATVNPSGCCGMSPQ*QARSPH Trigger: GTGGGGAGATCGAGCCTGGCACTGAGGCGACATCCC...GCAGCAGCCGCTTGGATTCACAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR CCA 90 bp | CTGGCCGCGGTGGTACAGGCCTGCAATCCCTCAGCACCTAGGAGGTGGAGGTGCCAAAGAACCACTTCCTaGAATGAGGTGTGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: LAAVVQACNPSAPRRWRCQRTTS*NEVCHP Trigger: TGGGTGGCACACCTCATTCCAGGAAGTGGTTCTTTG...GCACCTCCACCTCCTAGGTGCTGAGGGATTGCAGGCCTGTACCACCGCGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGTGAATCCAAGCGGCTGCTGCCCGAGTGCAGCAGGGTaGCTCTGCATTTTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QVLPHQTCRATVNPSGCCPSAAG*LCIFSC Trigger: GCAAGAGAAAATGCAGAGCCACCCTGCTGCACTCGG...GCAGCAGCCGCTTGGATTCACAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR TCA 90 bp | GTGCAGAGTGAACAGACGTGGAATGCAGAGCTGGAAACAAGATGCACTCCAGCATCCCTTCCCTCCAGGTaGCCAGCAGCAAGTACCGAT | + |
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Preference number: 4 (lower is better) Translates to: VQSEQTWNAELETRCTPASLPSR*PAASTD Trigger: ATCGGTACTTGCTGCTGGTCACCTGGAGGGAAGGGA...TGCTGGAGTGCATCTTGTTTCCAGCTCTGCATTCCACGTCTGTTCACTCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGTCTGGCTGCAGGCCGTaGAGCTCTCATGGGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRSGCRP*SSHGPP Trigger: CGGAGGCCCATGAGAGCTTCACGGCCTGCAGCCAGA...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CCA 90 bp | TCAGTTCCTGCCTCAGGTTCCTCCTCTGAGTTCCCTCACTATGGACTTTGCAGAAACGAGCCATTGATCTaGCTGGCCGAGTGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SVPASGSSSEFPHYGLCRNEPLI*LAECSR Trigger: CCTGCTGCACTCGGCCAGCCAGATCAATGGCTCGTT...TCTGCAAAGTCCATAGTGAGGGAACTCAGAGGAGGAACCTGAGGCAGGAACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR TCA 90 bp | TTCCACACAACAGCATCATCCAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGTTCCTTCCACTTTCTTaGGGCCAGTTGGCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FHTTASSKSFLTKPAGLLFLPLS*GQLAGR Trigger: CCTCCCAGCCAACTGGCCTCAAGAAAGTGGAAGGAA...CAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTGGATGATGCTGTTGTGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAGGCAGAGGAAGCCCTaGCACACAGCGCTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRRQRKP*HTALCL Trigger: CAGGCAGAGCGCTGTGTGTCAGGGCTTCCTCTGCCT...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATCTGGCTGCAGGCCGTaGAGCTCTCATGGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKSGCRP*SSHGPP Trigger: CGGAGGCCCATGAGAGCTTCACGGCCTGCAGCCAGA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGGGATGTCGCCTCAGTaGCAGGCTCGATCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKGMSPQ*QARSPH Trigger: GTGGGGAGATCGAGCCTGGCACTGAGGCGACATCCC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR GCA 90 bp | TTACCACCCACTGGTCTAATGGTCAGTCACAGCCCTGAGACTCAGCATTGGTTCGCAGCAGGGTGGCTCTaGATTTTCTCTTGCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPTGLMVSHSPETQHWFAAGWL*IFSCPY Trigger: GTATGGGCAAGAGAAAATGCAGAGCCACCCTGCTGC...GAACCAATGCTGAGTCTCAGGGCTGTGACTGACCATTAGACCAGTGGGTGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGACACTCTGAGGCTCTaGCAGAACTGCAGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRDTLRL*QNCRGW Trigger: CCATCCCCTGCAGTTCTGTCAGAGCCTCAGAGTGTC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAACACAGCGCTCTGCCTaGGGCTTCCTGGGTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKTQRSA*GFLGFP Trigger: AGGGAAACCCAGGAAGCCTCAGGCAGAGCGCTGTGT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | TTCCACACAACAGCATCATCCAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGAGAGAGCACCAACCTTaGCACACAGGGAAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FHTTASSKSFLTKPAGLLREHQP*HTGKRS Trigger: AGATCTCTTCCCTGTGTGGCAAGGTTGGTGCTCTCT...CAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTGGATGATGCTGTTGTGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGCTGGAAACAAGATGCACTCCAGCAAGGCCAGTAAACCCAGCAAAGCAGGCTTCGGGCTGGTTTaGAGCCTTTCTTCTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRAGNKMHSSKASKPSKAGFGLV*SLSSFQ Trigger: CTGAAAAGAAGAAAGGCTGCAAACCAGCCCGAAGCC...TGCTTTGCTGGGTTTACTGGCCTTGCTGGAGTGCATCTTGTTTCCAGCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGATGAGTTACCACCCACTGGTCTAATGGTCAGTCACAGCCCTGAGACTGCGCTCCCTCGTGAGTaGCAACAGACTTTTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPDELPPTGLMVSHSPETALPRE*QQTFEF Trigger: GAACTCAAAAGTCTGTTGGCACTCACGAGGGAGCGC...AGTCTCAGGGCTGTGACTGACCATTAGACCAGTGGGTGGTAACTCATCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAACGAGCCATTGATCTaGCTGGCCGAGTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRNEPLI*LAECSR Trigger: CCTGCTGCACTCGGCCAGCCAGATCAATGGCTCGTT...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCAGAACTGCAGGGGATaGAAGAGGGCTCAGCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRQNCRG*KRAQHG Trigger: ACCGTGCTGAGCCCTCTTCCATCCCCTGCAGTTCTG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATCCCTTCCCTCCAGGTaGCCAGCAGCAAGTACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKSLPSR*PAASTD Trigger: ATCGGTACTTGCTGCTGGTCACCTGGAGGGAAGGGA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGATGAGTTACCACCCACTGGTCTAATGGTCAGTCACAGCCCTGAGACTCGGTCTGGCTTCTCCTaGCTTTGTTTTCATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPDELPPTGLMVSHSPETRSGFS*LCFHLP Trigger: GGGAAGATGAAAACAAAGGCAGGAGAAGCCAGACCG...AGTCTCAGGGCTGTGACTGACCATTAGACCAGTGGGTGGTAACTCATCAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCGGGGACCCTCTTTATaGCCCAGCAACTGTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRRGPSL*PSNCSD Trigger: GTCTGAACAGTTGCTGGGCCATAAAGAGGGTCCCCG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCAGCACGGTGGGGACTaGAAAACTGTCTCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRQHGGD*KTVSGA Trigger: TGCACCAGAGACAGTTTTCCAGTCCCCACCGTGCTG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGAGGGCTCAGCACGGTaGGGACTGGAAAACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKEGSAR*GLENCL Trigger: GAGACAGTTTTCCAGTCCCCACCGTGCTGAGCCCTC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACAGAACTGCAGGGGATaGAAGAGGGCTCAGCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKQNCRG*KRAQHG Trigger: ACCGTGCTGAGCCCTCTTCCATCCCCTGCAGTTCTG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCTCGTAAGTCTTTTCTaGGGGTACAGGCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRLVSLF*GYRQLG Trigger: CCCCAGCTGCCTGTACCCCCAGAAAAGACTTACGAG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCTGCCTGAGGCTTCCTaGGTTTCCCTGTGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRLPEAS*VSLCDG Trigger: ACCATCACACAGGGAAACCCAGGAAGCCTCAGGCAG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATTCCTTCCACTTTCTTaGGGCCAGTTGGCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKFLPLS*GQLAGR Trigger: CCTCCCAGCCAACTGGCCTCAAGAAAGTGGAAGGAA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCCTGCCTCAGGTTCCTCCTCTGAGTTCCCTCACTATGGACTTTGCAGAAATCCGCATATTGCTTaGACCGCAAAGAACCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVPASGSSSEFPHYGLCRNPHIA*TAKNHF Trigger: GAAGTGGTTCTTTGCGGTGCAAGCAATATGCGGATT...TCTGCAAAGTCCATAGTGAGGGAACTCAGAGGAGGAACCTGAGGCAGGAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGCAGCAGGGTGGCTCTaGATTTTCTCTTGCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRAAGWL*IFSCPY Trigger: GTATGGGCAAGAGAAAATGCAGAGCCACCCTGCTGC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGCGCTCCCTCGTGAGTaGCAACAGACTTTTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRALPRE*QQTFEF Trigger: GAACTCAAAAGTCTGTTGGCACTCACGAGGGAGCGC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACCGAGTGCAGCAGGGTaGCTCTGCATTTTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKPSAAG*LCIFSC Trigger: GCAAGAGAAAATGCAGAGCCACCCTGCTGCACTCGG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTTCCTGCCTCAGGTTCCTCCTCTGAGTTCCCTCACTATGGACTTTGCAGACTAAAGCTGCTTCAGTaGGGAGAACATCAAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVPASGSSSEFPHYGLCRLKLLQ*GEHQSD Trigger: GTCACTTTGATGTTCTCCCCACTGAAGCAGCTTTAG...TCTGCAAAGTCCATAGTGAGGGAACTCAGAGGAGGAACCTGAGGCAGGAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGTGTCTCTGGTGCAGGTaGTCTGCGTCTCGTAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRCLWCR*SASRNE Trigger: TTCGTTACGAGACGCAGACCACCTGCACCAGAGACA...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACTGCCTGAGGCTTCCTaGGTTTCCCTGTGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKLPEAS*VSLCDG Trigger: ACCATCACACAGGGAAACCCAGGAAGCCTCAGGCAG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAAGGTGTGCCACCCACTaGACAAGCAGGGAATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKRCATH*TSRECT Trigger: AGTACATTCCCTGCTTGTTCAGTGGGTGGCACACCT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR TCA 90 bp | CATGCCACTTATGTTAGGAGTGAGCAAATACACAGAATCAGGTCTCCAGAGGAAAGGTGTGCCACCCACTaGACAAGCAGGGAATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HATYVRSEQIHRIRSPEERCATH*TSRECT Trigger: AGTACATTCCCTGCTTGTTCAGTGGGTGGCACACCT...TTCCTCTGGAGACCTGATTCTGTGTATTTGCTCACTCCTAACATAAGTGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCGAATAAGGCGCGACTaGAGTTCAGAAAATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRRIRRD*SSENPP Trigger: TGGGGGATTTTCTGAACTTCAGTCGCGCCTTATTCG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAGAGAGCACCAACCTTaGCACACAGGGAAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRREHQP*HTGKRS Trigger: AGATCTCTTCCCTGTGTGGCAAGGTTGGTGCTCTCT...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGCAGCAGGGTGGCTCTaGATTTTCTCTTGCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKAAGWL*IFSCPY Trigger: GTATGGGCAAGAGAAAATGCAGAGCCACCCTGCTGC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCCTGCCTCAGGTTCCTCCTCTGAGTTCCCTCACTATGGACTTTGCAGAATGAATGACACTGAGTaGAAACGAGCCATTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPASGSSSEFPHYGLCRMNDTE*KRAIDL Trigger: CAGATCAATGGCTCGTTTGCACTCAGTGTCATTCAT...TCTGCAAAGTCCATAGTGAGGGAACTCAGAGGAGGAACCTGAGGCAGGAACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGGCTTCGGGCTGGTTTaGAGCCTTTCTTCTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRGFGLV*SLSSFQ Trigger: CTGAAAAGAAGAAAGGCTGCAAACCAGCCCGAAGCC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGCGCTCCCTCGTGAGTaGCAACAGACTTTTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKALPRE*QQTFEF Trigger: GAACTCAAAAGTCTGTTGGCACTCACGAGGGAGCGC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCCCTGAGACTCAGCATTGGTTCCATGGAAATGGGCAGAGTCTGCCACAGGAAGATGCTATCTTCTTaGCAAGGAAGCAGGTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TALRLSIGSMEMGRVCHRKMLSS*QGSRYL Trigger: TAAATACCTGCTTCCTTGCCAAGAAGATAGCATCTT...CCTGTGGCAGACTCTGCCCATTTCCATGGAACCAATGCTGAGTCTCAGGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATTTCTTGAGGCCAGTTaGCTGGGAGGTGGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKFLEAS*LGGGMS Trigger: ACTCATCCCACCTCCCAGCCAACTGGCCTCAAGAAA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR CCA 90 bp | AAGCCTAAAAAGGCAATGACGAGACAGGCTAAGTCTGTCCTTTCTCCATTTGTTCGGGGACCCTCTTTATaGCCCAGCAACTGTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KPKKAMTRQAKSVLSPFVRGPSL*PSNCSD Trigger: GTCTGAACAGTTGCTGGGCCATAAAGAGGGTCCCCG...AACAAATGGAGAAAGGACAGACTTAGCCTGTCTCGTCATTGCCTTTTTAGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATGTCTCTGGTGCAGGTaGTCTGCGTCTCGTAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKCLWCR*SASRNE Trigger: TTCGTTACGAGACGCAGACCACCTGCACCAGAGACA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGTCTTTGAGGTATCTTTaGAAGCTTCCCGGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRSLRYL*KLPGQA Trigger: TGCCTGGCCGGGAAGCTTCCAAAGATACCTCAAAGA...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACGAATAAGGCGCGACTaGAGTTCAGAAAATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKRIRRD*SSENPP Trigger: TGGGGGATTTTCTGAACTTCAGTCGCGCCTTATTCG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACGGTCTGGCTTCTCCTaGCTTTGTTTTCATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKRSGFS*LCFHLP Trigger: GGGAAGATGAAAACAAAGGCAGGAGAAGCCAGACCG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACAAAGAACCACTTCCTaGAATGAGGTGTGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKQRTTS*NEVCHP Trigger: TGGGTGGCACACCTCATTCCAGGAAGTGGTTCTTTG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATCTTTGAGGTATCTTTaGAAGCTTCCCGGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKSLRYL*KLPGQA Trigger: TGCCTGGCCGGGAAGCTTCCAAAGATACCTCAAAGA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACACAACAGCATCATCCAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGAGCTTGTCTGATAACTaGTGCAAATTTTCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FHTTASSKSFLTKPAGLLSLSDN*CKFSAD Trigger: ATCAGCAGAAAATTTGCATCAGTTATCAGACAAGCT...CAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTGGATGATGCTGTTGTGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGTGCCAACAGACTTTTaGGTTCATCGGCAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKVPTDF*VHRQKR Trigger: CCTTTTCTGCCGATGAACTCAAAAGTCTGTTGGCAC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGAGCTGGAAACAAGATGCACTCCAGCAAGGCCAGTAAACCCAGCAAAGCAGAAGTTTCTAAATTCTaGAGAACATGTCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRAGNKMHSSKASKPSKAEVSKF*RTCLSG Trigger: GCCAGAAAGACATGTTCTTCAGAATTTAGAAACTTC...TGCTTTGCTGGGTTTACTGGCCTTGCTGGAGTGCATCTTGTTTCCAGCTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACTCTGCATTTTCTCTTaGCCATACCTTGCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKLCIFS*PYLAAG Trigger: TCCTGCTGCAAGGTATGGGCAAGAGAAAATGCAGAG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGGTGATGATTACTATTaGAACTCGCTTGGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRGDDYY*NSLGKA Trigger: TGCCTTCCCAAGCGAGTTGCAATAGTAATCATCACC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCTAAAGCTGCTTCAGTaGGGAGAACATCAAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRLKLLQ*GEHQSD Trigger: GTCACTTTGATGTTCTCCCCACTGAAGCAGCTTTAG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGCCATTCCAGAGGATTaGTTTCCATTAGGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRAIPED*FPLGLK Trigger: CTTCAAGCCTAATGGAAACCAATCCTCTGGAATGGC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGATCCGTGTGTGTTTCTaGGACCGTGATTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRIRVCF*DRDSFI Trigger: AATGAAGGAATCACGGTCCCAGAAACACACACGGAT...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCCTTCAGGTAGAACTTaGAGATGTCGAAGAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRPSGRT*RCRRVS Trigger: AGAGACTCTTCGACATCTCCAAGTTCTACCTGAAGG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGTTTTCATCTTCCCATaGATGACACTGAGTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRVFIFP*MTLSAN Trigger: GTTTGCACTCAGTGTCATTCATGGGAAGATGAAAAC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGCAAAGCAGTGCATCTGCTCAAAGATGGACAGAGCTTAACAGGAACTGTTTTCATCTTCCCATaGATGACACTGAGTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQSKAVHLLKDGQSLTGTVFIFP*MTLSAN Trigger: GTTTGCACTCAGTGTCATTCATGGGAAGATGAAAAC...AGTTCCTGTTAAGCTCTGTCCATCTTTGAGCAGATGCACTGCTTTGCTTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAAATCCGCATATTGCTTaGACCGCAAAGAACCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKNPHIA*TAKNHF Trigger: GAAGTGGTTCTTTGCGGTGCAAGCAATATGCGGATT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACTAAAGCTGCTTCAGTaGGGAGAACATCAAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKLKLLQ*GEHQSD Trigger: GTCACTTTGATGTTCTCCCCACTGAAGCAGCTTTAG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGCCATTCCAGAGGATTaGTTTCCATTAGGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKAIPED*FPLGLK Trigger: CTTCAAGCCTAATGGAAACCAATCCTCTGGAATGGC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGCAAAGCAGTGCATCTGCTCAAAGATGGACAGAGCTTAACAGGAACTAAGAACATGTCTTTCTaGCCATTCCAGAGGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQSKAVHLLKDGQSLTGTKNMSF*PFQRIG Trigger: ACCAATCCTCTGGAATGGCCAGAAAGACATGTTCTT...AGTTCCTGTTAAGCTCTGTCCATCTTTGAGCAGATGCACTGCTTTGCTTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGTCCAGGACTAAGCTCTaGTGTCAAAACAAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRSRTKL*CQNKRL Trigger: AAGCCTTTTGTTTTGACACCAGAGCTTAGTCCTGGA...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCTATTGCAACTCGCTTaGGAAGGCAAACAATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRLLQLA*EGKQSE Trigger: TTCTGATTGTTTGCCTTCCCAAGCGAGTTGCAATAG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAATCCGTGTGTGTTTCTaGGACCGTGATTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKIRVCF*DRDSFI Trigger: AATGAAGGAATCACGGTCCCAGAAACACACACGGAT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACCTTCAGGTAGAACTTaGAGATGTCGAAGAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKPSGRT*RCRRVS Trigger: AGAGACTCTTCGACATCTCCAAGTTCTACCTGAAGG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| 3UTR CAA 72 bp | ACAGATATGGCTGTAAGCAAGCCTGGGGGCATTTTCTaGAGTGATGATTTAGATACCGGAGGGTCTAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: TDMAVSKPGGIF*SDDLDTGGSNL Trigger: TAAGTTAGACCCTCCGGTATCTAAATCATCACTCAAGAAAATGCCCCCAGGCTTGCTTACAGCCATATCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGCACTCAACAGCACTCTaGCATTCTTCTATATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRHSTAL*HSSIFA Trigger: AGCAAATATAGAAGAATGTCAGAGTGCTGTTGAGTG...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR TCA 90 bp | CCTAAAAAGGCAATGACGAGACAGGCTAAGTCTGTCCTTTCTCCATTTGTTTATGTGCCAACAGACTTTTaGGTTCATCGGCAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKKAMTRQAKSVLSPFVYVPTDF*VHRQKR Trigger: CCTTTTCTGCCGATGAACTCAAAAGTCTGTTGGCAC...ATAAACAAATGGAGAAAGGACAGACTTAGCCTGTCTCGTCATTGCCTTTTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATCAAAAGGTAAGACCTaGAGTTTTCCAGGACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKSKGKT*SFPGLS Trigger: GCTTAGTCCTGGAAAACTTCAGGTCTTACCTTTTGA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGTAAAATCCGCATATTaGTTGCACCGCAAAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKVKSAY*LHRKEP Trigger: TGGTTCTTTGCGGTGCAAGCAATATGCGGATTTTAC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAGGGTAAGGATTCCCTaGTATTACTGTCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRRVRIP*YYCHLL Trigger: AAGAAGATGACAGTAATAGCAGGGAATCCTTACCCT...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAATGAATGACACTGAGTaGAAACGAGCCATTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKMNDTE*KRAIDL Trigger: CAGATCAATGGCTCGTTTGCACTCAGTGTCATTCAT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAAAGAACATGTCTTTCTaGCCATTCCAGAGGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKKNMSF*PFQRIG Trigger: ACCAATCCTCTGGAATGGCCAGAAAGACATGTTCTT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATCCAGGACTAAGCTCTaGTGTCAAAACAAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKSRTKL*CQNKRL Trigger: AAGCCTTTTGTTTTGACACCAGAGCTTAGTCCTGGA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACTATTGCAACTCGCTTaGGAAGGCAAACAATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKLLQLA*EGKQSE Trigger: TTCTGATTGTTTGCCTTCCCAAGCGAGTTGCAATAG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGTTTTTGTCCTGAACTaGTCTTTGAGGTATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRVFVLN*SLRYLW Trigger: CCAAAGATACCTCAAAGACCAGTTCAGGACAAAAAC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAGCTTGTCTGATAACTaGTGCAAATTTTCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLRSLSDN*CKFSAD Trigger: ATCAGCAGAAAATTTGCATCAGTTATCAGACAAGCT...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGCAAAGCAGTGCATCTGCTCAAAGATGGACAGAGCTTAACAGGAACTGATCAATGGCATTTCTaGATTCTTCTAAAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QQSKAVHLLKDGQSLTGTDQWHF*ILLKAQ Trigger: TTGTGCCTTTAGAAGAATTCAGAAATGCCATTGATC...AGTTCCTGTTAAGCTCTGTCCATCTTTGAGCAGATGCACTGCTTTGCTTTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGAAGTTTCTAAATTCTaGAGAACATGTCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MRHLLFGESLQAVYSSLREVSKF*RTCLSG Trigger: GCCAGAAAGACATGTTCTTCAGAATTTAGAAACTTC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGCAAAGCAGTGCATCTGCTCAAAGATGGACAGAGCTTAACAGGAACTGAAAACCTTAGAAGATaGTATCTTCTTGGCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQSKAVHLLKDGQSLTGTENLRR*YLLGKE Trigger: TTCCTTGCCAAGAAGATAGCATCTTCTAAGGTTTTC...AGTTCCTGTTAAGCTCTGTCCATCTTTGAGCAGATGCACTGCTTTGCTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGACTTTGCAGAAGTATAAGCCTAGCTGCTTTCAGTCAGTAATTTATCCTCTCTGCATTTTCTCTTaGCCATACCTTGCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWTLQKYKPSCFQSVIYPLCIFS*PYLAAG Trigger: TCCTGCTGCAAGGTATGGGCAAGAGAAAATGCAGAG...AGGATAAATTACTGACTGAAAGCAGCTAGGCTTATACTTCTGCAAAGTCCATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAAAAGGCAATGACGAGACAGGCTAAGTCTGTCCTTTCTCCATTTGTTTATGCCATTCCAGAGGATTaGTTTCCATTAGGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKKAMTRQAKSVLSPFVYAIPED*FPLGLK Trigger: CTTCAAGCCTAATGGAAACCAATCCTCTGGAATGGC...ATAAACAAATGGAGAAAGGACAGACTTAGCCTGTCTCGTCATTGCCTTTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| 3UTR CAA 72 bp | ACAATGGGCAAGCACTCTTTTAGCTTAGGAGGGTCTTaGTCAGAAGGCAACAGTATTATGTCTATCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMGKHSFSLGGS*SEGNSIMSIIA Trigger: AGCAATGATAGACATAATACTGTTGCCTTCTGACAAAGACCCTCCTAAGCTAAAAGAGTGCTTGCCCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169517.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATATGATAACTTTTGCTaGATGCCATTCCTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKYDNFC*MPFLQM Trigger: CATCTGAAGGAATGGCATTCAGCAAAAGTTATCATA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGATCAATGGCATTTCTaGATTCTTCTAAAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKDQWHF*ILLKAQ Trigger: TTGTGCCTTTAGAAGAATTCAGAAATGCCATTGATC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCTAAAAAGGCAATGACGAGACAGGCTAAGTCTGTCCTTTCTCCATTTGTTAGGGTAAGGATTCCCTaGTATTACTGTCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPKKAMTRQAKSVLSPFVRVRIP*YYCHLL Trigger: AAGAAGATGACAGTAATAGCAGGGAATCCTTACCCT...AACAAATGGAGAAAGGACAGACTTAGCCTGTCTCGTCATTGCCTTTTTAGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGAAAACCTTAGAAGATaGTATCTTCTTGGCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKENLRR*YLLGKE Trigger: TTCCTTGCCAAGAAGATAGCATCTTCTAAGGTTTTC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAAAGATGCTATCTTCTTaGCAAGGAAGCAGGTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKKMLSS*QGSRYL Trigger: TAAATACCTGCTTCCTTGCCAAGAAGATAGCATCTT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
||
| CDS-3UTR TCA 90 bp | AAGCCTAAAAAGGCAATGACGAGACAGGCTAAGTCTGTCCTTTCTCCATTTGTTTATGATAACTTTTGCTaGATGCCATTCCTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KPKKAMTRQAKSVLSPFVYDNFC*MPFLQM Trigger: CATCTGAAGGAATGGCATTCAGCAAAAGTTATCATA...AACAAATGGAGAAAGGACAGACTTAGCCTGTCTCGTCATTGCCTTTTTAGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACGTGATTCCTTCATTTaGTTTGATGATTTTGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKRDSFI*FDDFDS Trigger: CGAATCAAAATCATCAAAGCAAATGAAGGAATCACG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACTTTCTAAAGCTTTTTaGTCATCCAGGCAATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLFGESLQAVYSSLRKLSKAF*SSRQYS Trigger: TGAATATTGCCTGGATGACCAAAAAGCTTTAGAAAG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| 3UTR CAA 72 bp | CTAACATGTATCACTCTGACCCTTGGTGAAACGAGTTaGTGTCCAGTTGTTCAGCTAAAACATTTTATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTCITLTLGETS*CPVVQLKHFIR Trigger: TCTGATAAAATGTTTTAGCTGAACAACTGGACACAAACTCGTTTCACCAAGGGTCAGAGTGATACATGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS GCA 90 bp | TCAAATCGGGCTGTTTGTCGGTGCTCTCCAGGGATGTCGCCTCAGTaGCAGGCTCGATCTCCCCACCCGCCACGGATCGAAACTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNRAVCRCSPGMSPQ*QARSPHPPRIETSL Trigger: AAGGGAAGTTTCGATCCGTGGCGGGTGGGGAGATCGAGCCTGGCACTGAGGCGACATCCCTGGAGAGCACCGACAAACAGCCCGATTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS GCA 90 bp | AGAGGTGATAAATATTGGTTGCGGTCAAATCGGGCTGTTTGTCGGTaGTCTCCAGGGATGTCGCCTCAGTGCCAGGCTCGATCTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGDKYWLRSNRAVCR*SPGMSPQCQARSPH Trigger: GTGGGGAGATCGAGCCTGGCACTGAGGCGACATCCCTGGAGAGCACCGACAAACAGCCCGATTTGACCGCAACCAATATTTATCACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS GCA 90 bp | GGCTTCTCCTGCCTTTGTTTTCATCTTCCCATGAATGACACTGAGTaGAAACGAGCCATTGATCTGGCTGGCCGAGTGCAGCAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GFSCLCFHLPMNDTE*KRAIDLAGRVQQGG Trigger: GCCACCCTGCTGCACTCGGCCAGCCAGATCAATGGCTCGTTTGCACTCAGTGTCATTCATGGGAAGATGAAAACAAAGGCAGGAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
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| CDS CCA 90 bp | CAGGCAGAGGAAGCCCTGACACACAGCGCTCTGCCTGAGGCTTCCTaGGTTTCCCTGTGTGATGGTGATGATTACTATTGCAACTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QAEEALTHSALPEAS*VSLCDGDDYYCNSL Trigger: AAGCGAGTTGCAATAGTAATCATCACCATCACACAGGGAAACCCAGGAAGCCTCAGGCAGAGCGCTGTGTGTCAGGGCTTCCTCTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS CCA 90 bp | TCCTTAGCATCCAGTAATGTGAGTGAGTCCCGGGGACCCTCTTTATaGCCCAGCAACTGTTCAGACGAACGCGGTAATGAGCCAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLASSNVSESRGPSL*PSNCSDERGNEPVL Trigger: GAGAACTGGCTCATTACCGCGTTCGTCTGAACAGTTGCTGGGCCATAAAGAGGGTCCCCGGGACTCACTCACATTACTGGATGCTAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
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| CDS TCA 90 bp | GGGAAACTCGGTCTGGCTTCTCCTGCCTTTGTTTTCATCTTCCCATaGATGACACTGAGTGCAAACGAGCCATTGATCTGGCTGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKLGLASPAFVFIFP*MTLSANEPLIWLAE Trigger: CTCGGCCAGCCAGATCAATGGCTCGTTTGCACTCAGTGTCATTCATGGGAAGATGAAAACAAAGGCAGGAGAAGCCAGACCGAGTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
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| CDS-3UTR CAA 90 bp | TTCCACACAACAGCATCATCCAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGATTCCTTCCACTTTCTaGAGGCCAGTTGGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FHTTASSKSFLTKPAGLLIPSTF*RPVGWE Trigger: CTCCCAGCCAACTGGCCTCAAGAAAGTGGAAGGAAT...CAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTGGATGATGCTGTTGTGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR CAA 90 bp | CAAGTCCTTCCTCACCAAACCTGCAGGGCTACTGTGAATCCAAGCGGCTGCTGCTGGCTTCTCCTGCCTTaGTTTTCATCTTCCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: QVLPHQTCRATVNPSGCCWLLLP*FSSSHE Trigger: TTCATGGGAAGATGAAAACAAAGGCAGGAGAAGCCA...GCAGCAGCCGCTTGGATTCACAGTAGCCCTGCAGGTTTGGTGAGGAAGGACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
||
| CDS GCA 90 bp | CGCATATTGCTTGCACCGCAAAGAACCACTTCCTGGAATGAGGTGTaGCACCCACTGAACAAGCAGGGAATGTACTGTCATCTGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RILLAPQRTTSWNEV*HPLNKQGMYCHLDG Trigger: TCCATCCAGATGACAGTACATTCCCTGCTTGTTCAGTGGGTGGCACACCTCATTCCAGGAAGTGGTTCTTTGCGGTGCAAGCAATATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CCA 90 bp | TTGGGCTTCTTAGCCATGTATTCCTTCCACTTTCTTGAGGCCAGTTaGCTGGGAGGTGGGATGAGTACATTGCTAACAGTACACGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGFLAMYSFHFLEAS*LGGGMSTLLTVHGS Trigger: GCTGCCGTGTACTGTTAGCAATGTACTCATCCCACCTCCCAGCCAACTGGCCTCAAGAAAGTGGAAGGAATACATGGCTAAGAAGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTTCCTGCCTCAGGTTCCTCCTCTGAGTTCCCTCACTATGGACTTTGCAGAAGGCTTCGGGCTGGTTaGCAGCCTTTCTTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVPASGSSSEFPHYGLCRRLRAG*QPFFFS Trigger: TGAAAAGAAGAAAGGCTGCAAACCAGCCCGAAGCCT...TCTGCAAAGTCCATAGTGAGGGAACTCAGAGGAGGAACCTGAGGCAGGAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS TCA 90 bp | GTGTCTGTTTGTGCTAAAGCTGCTTCAGTGGGGAGAACATCAAAGTaGCCTAGGAAGCGCTCCCTCGTGAGTGCCAACAGACTTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSVCAKAASVGRTSK*PRKRSLVSANRLLS Trigger: ACTCAAAAGTCTGTTGGCACTCACGAGGGAGCGCTTCCTAGGTCACTTTGATGTTCTCCCCACTGAAGCAGCTTTAGCACAAACAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
||
| CDS-3UTR CAA 90 bp | TTACCACCCACTGGTCTAATGGTCAGTCACAGCCCTGAGACTCAGCATTGGTTCGGCCATTCCAGAGGATaGGTTTCCATTAGGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPPTGLMVSHSPETQHWFGHSRG*VSIRLE Trigger: TTCAAGCCTAATGGAAACCAATCCTCTGGAATGGCC...GAACCAATGCTGAGTCTCAGGGCTGTGACTGACCATTAGACCAGTGGGTGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS TCA 90 bp | ACTGATGGTCTTGGGCTTCTTAGCCATGTATTCCTTCCACTTTCTTaGGGCCAGTTGGCTGGGAGGTGGGATGAGTACATTGCTAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TDGLGLLSHVFLPLS*GQLAGRWDEYIANS Trigger: ACTGTTAGCAATGTACTCATCCCACCTCCCAGCCAACTGGCCTCAAGAAAGTGGAAGGAATACATGGCTAAGAAGCCCAAGACCATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CCA 90 bp | ACTGGTAAAATCCGCATATTGCTTGCACCGCAAAGAACCACTTCCTaGAATGAGGTGTGCCACCCACTGAACAAGCAGGGAATGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGKIRILLAPQRTTS*NEVCHPLNKQGMYC Trigger: ACAGTACATTCCCTGCTTGTTCAGTGGGTGGCACACCTCATTCCAGGAAGTGGTTCTTTGCGGTGCAAGCAATATGCGGATTTTACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS GCA 90 bp | CCTGAGGCTTCCTGGGTTTCCCTGTGTGATGGTGATGATTACTATTaGAACTCGCTTGGGAAGGCAAACAATCAGAACTTTCTGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PEASWVSLCDGDDYY*NSLGKANNQNFLIS Trigger: CGAGATCAGAAAGTTCTGATTGTTTGCCTTCCCAAGCGAGTTGCAATAGTAATCATCACCATCACACAGGGAAACCCAGGAAGCCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | TCACTCAGCAAGCCCTTAGAGCTTCCACACAACAGCATCATCCAAGTCCTTCCTAAATCCGCATATTGCTaGCACCGCAAAGAACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSKPLELPHNSIIQVLPKSAYC*HRKEPL Trigger: AAGTGGTTCTTTGCGGTGCAAGCAATATGCGGATTT...AGGAAGGACTTGGATGATGCTGTTGTGTGGAAGCTCTAAGGGCTTGCTGAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGGTGGGATGAGTACATaGCTAACAGTACACGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKGGMST*LTVHGS Trigger: GCTGCCGTGTACTGTTAGCAATGTACTCATCCCACC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAATTCCTTCCACTTTCTaGAGGCCAGTTGGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKIPSTF*RPVGWE Trigger: CTCCCAGCCAACTGGCCTCAAGAAAGTGGAAGGAAT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
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| CDS-3UTR CAA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAGGCTTCGGGCTGGTTaGCAGCCTTTCTTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MRHLLFGESLQAVYSSLRRLRAG*QPFFFS Trigger: TGAAAAGAAGAAAGGCTGCAAACCAGCCCGAAGCCT...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAAGGCTTCGGGCTGGTTaGCAGCCTTTCTTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKRLRAG*QPFFFS Trigger: TGAAAAGAAGAAAGGCTGCAAACCAGCCCGAAGCCT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGGCCATTCCAGAGGATaGGTTTCCATTAGGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: MRHLLFGESLQAVYSSLRGHSRG*VSIRLE Trigger: TTCAAGCCTAATGGAAACCAATCCTCTGGAATGGCC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGTGGCTTCTCCTGCCTTaGTTTTCATCTTCCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: MRHLLFGESLQAVYSSLRWLLLP*FSSSHE Trigger: TTCATGGGAAGATGAAAACAAAGGCAGGAGAAGCCA...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGGCCATTCCAGAGGATaGGTTTCCATTAGGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKGHSRG*VSIRLE Trigger: TTCAAGCCTAATGGAAACCAATCCTCTGGAATGGCC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | ATGAGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGGTCCTGAACTGGTCTTaGAGGTATCTTTGGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MRHLLFGESLQAVYSSLRVLNWS*RYLWKL Trigger: AAGCTTCCAAAGATACCTCAAAGACCAGTTCAGGAC...CCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS GCA 90 bp | TCCTTCAGCATCCGTGTGTGTTTCTGGGACCGTGATTCCTTCATTTaGTTTGATGATTTTGATTCGTGTGCTCGTTTTTGTCCTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSIRVCFWDRDSFI*FDDFDSCARFCPEL Trigger: CAGTTCAGGACAAAAACGAGCACACGAATCAAAATCATCAAAGCAAATGAAGGAATCACGGTCCCAGAAACACACACGGATGCTGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAAAATCCGCATATTGCTaGCACCGCAAAGAACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKKSAYC*HRKEPL Trigger: AAGTGGTTCTTTGCGGTGCAAGCAATATGCGGATTT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAAGCTTAGGAGGGTCTTaGTCAGAAGGCAACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKSLGGS*SEGNSI Trigger: AATACTGTTGCCTTCTGACAAAGACCCTCCTAAGCT...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022998.14 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAATGGCTTCTCCTGCCTTaGTTTTCATCTTCCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKWLLLP*FSSSHE Trigger: TTCATGGGAAGATGAAAACAAAGGCAGGAGAAGCCA...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAAGTCCTGAACTGGTCTTaGAGGTATCTTTGGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKVLNWS*RYLWKL Trigger: AAGCTTCCAAAGATACCTCAAAGACCAGTTCAGGAC...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS CCA 90 bp | TTCAAGGTGTCTTTTACCACCTCCTTCAGCATCCGTGTGTGTTTCTaGGACCGTGATTCCTTCATTTGCTTTGATGATTTTGATTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FKVSFTTSFSIRVCF*DRDSFICFDDFDSC Trigger: ACACGAATCAAAATCATCAAAGCAAATGAAGGAATCACGGTCCCAGAAACACACACGGATGCTGAAGGAGGTGGTAAAAGACACCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS-3UTR CAA 90 bp | AGGCATCTGCTCTTTGGGGAAAGTTTACAGGCTGTGTACAGTTCTCTAAGGAAACTTCAAAGAGACCCCTaGATGTTTTCAGATCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RHLLFGESLQAVYSSLRKLQRDP*MFSDPS Trigger: TGAAGGATCTGAAAACATCAAGGGGTCTCTTTGAAG...TTTCCTTAGAGAACTGTACACAGCCTGTAAACTTTCCCCAAAGAGCAGATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS TCA 90 bp | CTGAACAAGCAGGGAATGTACTGTCATCTGGATGGATTGAATCGCTaGTGCTTCTCTTCAAGAGGTGATAAATATTGGTTGCGGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LNKQGMYCHLDGLNR*CFSSRGDKYWLRSN Trigger: ATTTGACCGCAACCAATATTTATCACCTCTTGAAGAGAAGCATCAGCGATTCAATCCATCCAGATGACAGTACATTCCCTGCTTGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS-3UTR CAA 90 bp | CCTAAAAAGGCAATGACGAGACAGGCTAAGTCTGTCCTTTCTCCATTTGTTTATAGCTTAGGAGGGTCTTaGTCAGAAGGCAACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: PKKAMTRQAKSVLSPFVYSLGGS*SEGNSI Trigger: AATACTGTTGCCTTCTGACAAAGACCCTCCTAAGCT...ATAAACAAATGGAGAAAGGACAGACTTAGCCTGTCTCGTCATTGCCTTTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170046.8 |
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| CDS GCA 72 bp | GCTGTTTGTCGGTGCTCTCCAGGGATGTCGCCTCAGTaGCAGGCTCGATCTCCCCACCCGCCACGGATCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AVCRCSPGMSPQ*QARSPHPPRIE Trigger: TTCGATCCGTGGCGGGTGGGGAGATCGAGCCTGGCACTGAGGCGACATCCCTGGAGAGCACCGACAAACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS TCA 72 bp | ATCTTTGGAAGCTTCCCGGCCAGGCAGAGGAAGCCCTaGCACACAGCGCTCTGCCTGAGGCTTCCTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: IFGSFPARQRKP*HTALCLRLPGF Trigger: AAACCCAGGAAGCCTCAGGCAGAGCGCTGTGTGTCAGGGCTTCCTCTGCCTGGCCGGGAAGCTTCCAAAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS TCA 72 bp | TTGCAGTGCTTCTCCTTCGGGGACACTCTGAGGCTCTaGCAGAACTGCAGGGGATGGAAGAGGGCTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQCFSFGDTLRL*QNCRGWKRAQH Trigger: GTGCTGAGCCCTCTTCCATCCCCTGCAGTTCTGTCAGAGCCTCAGAGTGTCCCCGAAGGAGAAGCACTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS CCA 72 bp | TCGAAGAGTCTCTGGCTGCAGGCCGTGAAGCTCTCATaGGCCTCCGTGATGTGGTGCCTCTTCAAGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SKSLWLQAVKLS*ASVMWCLFKVS Trigger: AGACACCTTGAAGAGGCACCACATCACGGAGGCCCATGAGAGCTTCACGGCCTGCAGCCAGAGACTCTTCGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS CCA 72 bp | CTGCAGGCCGTGAAGCTCTCATGGGCCTCCGTGATGTaGTGCCTCTTCAAGGTGTCTTTTACCACCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQAVKLSWASVM*CLFKVSFTTSF Trigger: GAAGGAGGTGGTAAAAGACACCTTGAAGAGGCACCACATCACGGAGGCCCATGAGAGCTTCACGGCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS CAA 90 bp | GGCCGAGTGCAGCAGGGTGGCTCTGCATTTTCTCTTGCCCATACCTaGCAGCAGGAGATGATAGCCAGAAAACTCTCCCTTCACGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRVQQGGSAFSLAHT*QQEMIARKLSLHGN Trigger: GTTGCCGTGAAGGGAGAGTTTTCTGGCTATCATCTCCTGCTGCAAGGTATGGGCAAGAGAAAATGCAGAGCCACCCTGCTGCACTCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
||
| CDS GCA 72 bp | TGGCCGAGTGCAGCAGGGTGGCTCTGCATTTTCTCTTaGCCATACCTTGCAGCAGGAGATGATAGCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: WPSAAGWLCIFS*PYLAAGDDSQK Trigger: TTTCTGGCTATCATCTCCTGCTGCAAGGTATGGGCAAGAGAAAATGCAGAGCCACCCTGCTGCACTCGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
||
| CDS CCA 72 bp | TCCAGTAATGTGAGTGAGTCCCGGGGACCCTCTTTATaGCCCAGCAACTGTTCAGACGAACGCGGTAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSNVSESRGPSL*PSNCSDERGNE Trigger: CTCATTACCGCGTTCGTCTGAACAGTTGCTGGGCCATAAAGAGGGTCCCCGGGACTCACTCACATTACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
||
| CDS CCA 72 bp | GAAGCCCTGACACACAGCGCTCTGCCTGAGGCTTCCTaGGTTTCCCTGTGTGATGGTGATGATTACTATTGC | + |
|
Preference number: 6 (lower is better) Translates to: EALTHSALPEAS*VSLCDGDDYYC Trigger: GCAATAGTAATCATCACCATCACACAGGGAAACCCAGGAAGCCTCAGGCAGAGCGCTGTGTGTCAGGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
||
| CDS CAA 72 bp | CTTGAGGCCAGTTGGCTGGGAGGTGGGATGAGTACATaGCTAACAGTACACGGCAGCACAAAGAGAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: LEASWLGGGMST*LTVHGSTKRAP Trigger: TGGTGCTCTCTTTGTGCTGCCGTGTACTGTTAGCAATGTACTCATCCCACCTCCCAGCCAACTGGCCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CCA 72 bp | ATCCGCATATTGCTTGCACCGCAAAGAACCACTTCCTaGAATGAGGTGTGCCACCCACTGAACAAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: IRILLAPQRTTS*NEVCHPLNKQG Trigger: TCCCTGCTTGTTCAGTGGGTGGCACACCTCATTCCAGGAAGTGGTTCTTTGCGGTGCAAGCAATATGCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CAA 90 bp | TTCCACTTTCTTGAGGCCAGTTGGCTGGGAGGTGGGATGAGTACATaGCTAACAGTACACGGCAGCACAAAGAGAGCACCAACCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: FHFLEASWLGGGMST*LTVHGSTKRAPTLP Trigger: TGGCAAGGTTGGTGCTCTCTTTGTGCTGCCGTGTACTGTTAGCAATGTACTCATCCCACCTCCCAGCCAACTGGCCTCAAGAAAGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS GCA 72 bp | CTTGCACCGCAAAGAACCACTTCCTGGAATGAGGTGTaGCACCCACTGAACAAGCAGGGAATGTACTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LAPQRTTSWNEV*HPLNKQGMYCH Trigger: ATGACAGTACATTCCCTGCTTGTTCAGTGGGTGGCACACCTCATTCCAGGAAGTGGTTCTTTGCGGTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS GCA 72 bp | AGGGAAGAGATCTGTTCCAACAGCAGCATGGAATTCTaGCTCGTGCAGTGCCCAGTCACCTCTAACTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: REEICSNSSMEF*LVQCPVTSNSN Trigger: GTTTGAGTTAGAGGTGACTGGGCACTGCACGAGGCAGAATTCCATGCTGCTGTTGGAACAGATCTCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CAA 90 bp | CCAGAAAACTCTCCCTTCACGGCAACATCGGGAACACTGATGGTCTaGGGCTTCTTAGCCATGTATTCCTTCCACTTTCTTGAGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PENSPFTATSGTLMV*GFLAMYSFHFLEAS Trigger: ACTGGCCTCAAGAAAGTGGAAGGAATACATGGCTAAGAAGCCCAAGACCATCAGTGTTCCCGATGTTGCCGTGAAGGGAGAGTTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS TCA 72 bp | CATATTGCTTGCACCGCAAAGAACCACTTCCTGGAATaGGGTGTGCCACCCACTGAACAAGCAGGGAATGTA | + |
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Preference number: 6 (lower is better) Translates to: HIACTAKNHFLE*GVPPTEQAGNV Trigger: TACATTCCCTGCTTGTTCAGTGGGTGGCACACCTCATTCCAGGAAGTGGTTCTTTGCGGTGCAAGCAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS GCA 72 bp | TGCCTTTGTTTTCATCTTCCCATGAATGACACTGAGTaGAAACGAGCCATTGATCTGGCTGGCCGAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CLCFHLPMNDTE*KRAIDLAGRVQ Trigger: CTGCACTCGGCCAGCCAGATCAATGGCTCGTTTGCACTCAGTGTCATTCATGGGAAGATGAAAACAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
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| CDS CAA 90 bp | AGTACATTGCTAACAGTACACGGCAGCACAAAGAGAGCACCAACCTaGCCACACAGGGAAGAGATCTGTTCCAACAGCAGCATGGAATTC | + |
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Preference number: 6 (lower is better) Translates to: STLLTVHGSTKRAPT*PHREEICSNSSMEF Trigger: GAATTCCATGCTGCTGTTGGAACAGATCTCTTCCCTGTGTGGCAAGGTTGGTGCTCTCTTTGTGCTGCCGTGTACTGTTAGCAATGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CAA 90 bp | TTGATGATTTTGATTCGTGTGCTCGTTTTTGTCCTGAACTGGTCTTaGAGGTATCTTTGGAAGCTTCCCGGCCAGGCAGAGGAAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LMILIRVLVFVLNWS*RYLWKLPGQAEEAL Trigger: CAGGGCTTCCTCTGCCTGGCCGGGAAGCTTCCAAAGATACCTCAAAGACCAGTTCAGGACAAAAACGAGCACACGAATCAAAATCATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS TCA 72 bp | GCAACTCGCTTGGGAAGGCAAACAATCAGAACTTTCTaGTCTCGTAAGTCTTTTCTGGGGGTACAGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATRLGRQTIRTF*SRKSFLGVQAA Trigger: AGCTGCCTGTACCCCCAGAAAAGACTTACGAGATCAGAAAGTTCTGATTGTTTGCCTTCCCAAGCGAGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS GCA 72 bp | GCTGATGCTTCTCTTCAAGAGGTGATAAATATTGGTTaGGGTCAAATCGGGCTGTTTGTCGGTGCTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ADASLQEVINIG*GQIGLFVGALQ Trigger: CTGGAGAGCACCGACAAACAGCCCGATTTGACCGCAACCAATATTTATCACCTCTTGAAGAGAAGCATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS GCA 72 bp | CGAGAAGTCAAAGGGGAAACTCGGTCTGGCTTCTCCTaGCTTTGTTTTCATCTTCCCATGAATGACACTGAG | + |
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Preference number: 6 (lower is better) Translates to: REVKGETRSGFS*LCFHLPMNDTE Trigger: CTCAGTGTCATTCATGGGAAGATGAAAACAAAGGCAGGAGAAGCCAGACCGAGTTTCCCCTTTGACTTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
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| CDS CCA 72 bp | TTAGCCATGTATTCCTTCCACTTTCTTGAGGCCAGTTaGCTGGGAGGTGGGATGAGTACATTGCTAACAGTA | + |
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Preference number: 6 (lower is better) Translates to: LAMYSFHFLEAS*LGGGMSTLLTV Trigger: TACTGTTAGCAATGTACTCATCCCACCTCCCAGCCAACTGGCCTCAAGAAAGTGGAAGGAATACATGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CAA 90 bp | GAACATGTCTTTCTGGCCATTCCAGAGGATTGGTTTCCATTAGGCTaGAAGAATAAGGTTCAACTGTACCGTCATCATTTACCACGCCGG | + |
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Preference number: 6 (lower is better) Translates to: EHVFLAIPEDWFPLG*KNKVQLYRHHLPRR Trigger: CCGGCGTGGTAAATGATGACGGTACAGTTGAACCTTATTCTTCAAGCCTAATGGAAACCAATCCTCTGGAATGGCCAGAAAGACATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
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| CDS GCA 72 bp | TTTGAGTTCATCGGCAGAAAAGGCTTCGGGCTGGTTTaGAGCCTTTCTTCTTTTCAGGCATTCTTTCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FEFIGRKGFGLV*SLSSFQAFFQS Trigger: GCTTTGAAAGAATGCCTGAAAAGAAGAAAGGCTGCAAACCAGCCCGAAGCCTTTTCTGCCGATGAACTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 ENSMUST00000170046.8 |
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| CDS CCA 72 bp | ATGATTTTGATTCGTGTGCTCGTTTTTGTCCTGAACTaGTCTTTGAGGTATCTTTGGAAGCTTCCCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MILIRVLVFVLN*SLRYLWKLPGQ Trigger: CTGGCCGGGAAGCTTCCAAAGATACCTCAAAGACCAGTTCAGGACAAAAACGAGCACACGAATCAAAATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS CAA 90 bp | TCAGCATCCGTGTGTGTTTCTGGGACCGTGATTCCTTCATTTGCTTaGATGATTTTGATTCGTGTGCTCGTTTTTGTCCTGAACTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SASVCVSGTVIPSFA*MILIRVLVFVLNWS Trigger: AGACCAGTTCAGGACAAAAACGAGCACACGAATCAAAATCATCAAAGCAAATGAAGGAATCACGGTCCCAGAAACACACACGGATGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS GCA 72 bp | TCCTGGGTTTCCCTGTGTGATGGTGATGATTACTATTaGAACTCGCTTGGGAAGGCAAACAATCAGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: SWVSLCDGDDYY*NSLGKANNQNF Trigger: AAAGTTCTGATTGTTTGCCTTCCCAAGCGAGTTGCAATAGTAATCATCACCATCACACAGGGAAACCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS CCA 72 bp | TCTTTTACCACCTCCTTCAGCATCCGTGTGTGTTTCTaGGACCGTGATTCCTTCATTTGCTTTGATGATTTT | + |
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Preference number: 6 (lower is better) Translates to: SFTTSFSIRVCF*DRDSFICFDDF Trigger: AAAATCATCAAAGCAAATGAAGGAATCACGGTCCCAGAAACACACACGGATGCTGAAGGAGGTGGTAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS CAA 72 bp | ATCAGAACTACAAAACTGGTAAAATCCGCATATTGCTaGCACCGCAAAGAACCACTTCCTGGAATGAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: IRTTKLVKSAYC*HRKEPLPGMRC Trigger: ACACCTCATTCCAGGAAGTGGTTCTTTGCGGTGCAAGCAATATGCGGATTTTACCAGTTTTGTAGTTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000170046.8 |
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| CDS CAA 90 bp | GTGTGTGTTTCTGGGACCGTGATTCCTTCATTTGCTTTGATGATTTaGATTCGTGTGCTCGTTTTTGTCCTGAACTGGTCTTTGAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: VCVSGTVIPSFALMI*IRVLVFVLNWSLRY Trigger: ATACCTCAAAGACCAGTTCAGGACAAAAACGAGCACACGAATCAAAATCATCAAAGCAAATGAAGGAATCACGGTCCCAGAAACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022998.14 ENSMUST00000169667.2 |
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| CDS TCA 72 bp | CAGGGAATGTACTGTCATCTGGATGGATTGAATCGCTaGTGCTTCTCTTCAAGAGGTGATAAATATTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: QGMYCHLDGLNR*CFSSRGDKYWL Trigger: CAACCAATATTTATCACCTCTTGAAGAGAAGCATCAGCGATTCAATCCATCCAGATGACAGTACATTCCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022998.14 ENSMUST00000169517.2 ENSMUST00000170046.8 |
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