Pregenerated sensors for MTARC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073481Ensembl transcript IDs: ENSMUST00000068725.10, ENSMUST00000161821.4
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAGCAGGGCTCAACAGCCAGGCCAAGACCGGCCAACAGGCTTTCGTaGGCATGCGAGCACATCAGATATGTGCACATTCCCTGCACATTC | + |
Preference number: 1 (lower is better) Translates to: QQGSTARPRPANRLS*ACEHIRYVHIPCTF Trigger: GAATGTGCAGGGAATGTGCACATATCTGATGTGCTCGCATGCTCACGAAAGCCTGTTGGCCGGTCTTGGCCTGGCTGTTGAGCCCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR-3UTR GCA 90 bp | GAGCCTTTAAGACTGAGTTCATGGTTTCTCCTTGTTCCTTCTTCCGAAGGAAGATATGTGCACATTCCCTaGACATTCAGGGCAAGAGGG | + |
Preference number: 2 (lower is better) Translates to: EPLRLSSWFLLVPSSEGRYVHIP*TFRARG Trigger: CCCTCTTGCCCTGAATGTGCAGGGAATGTGCACATA...TCTTCCTTCGGAAGAAGGAACAAGGAGAAACCATGAACTCAGTCTTAAAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR-3UTR TCA 90 bp | TCGCACTTATTAATGACAATGGAACCACACAGCTGTAAGAGAGCTAACTCGGCTAACAAAATAACCCCATaGCCTCTGAAGTCATTTCTG | + |
Preference number: 2 (lower is better) Translates to: SHLLMTMEPHSCKRANSANKITP*PLKSFL Trigger: CAGAAATGACTTCAGAGGTCATGGGGTTATTTTGTT...AGCCGAGTTAGCTCTCTTACAGCTGTGTGGTTCCATTGTCATTAATAAGTGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR TCA 72 bp | TCAACAGCCAGGCCAAGACCGGCCAACAGGCTTTCGTaGGCATGCGAGCACATCAGATATGTGCACATTCCC | + |
Preference number: 3 (lower is better) Translates to: STARPRPANRLS*ACEHIRYVHIP Trigger: GGGAATGTGCACATATCTGATGTGCTCGCATGCTCACGAAAGCCTGTTGGCCGGTCTTGGCCTGGCTGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR GCA 72 bp | ACAGGCTTTCGTGAGCATGCGAGCACATCAGATATGTaGACATTCCCTGCACATTCAGGGCAAGAGGGCTCC | + |
Preference number: 3 (lower is better) Translates to: TGFREHASTSDM*TFPAHSGQEGS Trigger: GGAGCCCTCTTGCCCTGAATGTGCAGGGAATGTGCACATATCTGATGTGCTCGCATGCTCACGAAAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR TCA 72 bp | AAGAAAAATAGAGATCCGGTTCCAGGAAGATGGCCATaGGGACTCGCAGATATGTCTCCTCGGACCTGGAAG | + |
Preference number: 3 (lower is better) Translates to: KKNRDPVPGRWP*GLADMSPRTWK Trigger: CTTCCAGGTCCGAGGAGACATATCTGCGAGTCCTCATGGCCATCTTCCTGGAACCGGATCTCTATTTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR TCA 72 bp | TGTTACTGCAAGCTAGTGCATCATCCTGTGCTACCGTaGGCCTTTAAGACTGAGTTCATGGTTTCTCCTTGT | + |
Preference number: 3 (lower is better) Translates to: CYCKLVHHPVLP*AFKTEFMVSPC Trigger: ACAAGGAGAAACCATGAACTCAGTCTTAAAGGCTCACGGTAGCACAGGATGATGCACTAGCTTGCAGTAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR CCA 72 bp | ATCCTGTGCTACCGTGAGCCTTTAAGACTGAGTTCATaGTTTCTCCTTGTTCCTTCTTCCGAAGGAAGATTC | + |
Preference number: 3 (lower is better) Translates to: ILCYREPLRLSS*FLLVPSSEGRF Trigger: GAATCTTCCTTCGGAAGAAGGAACAAGGAGAAACCATGAACTCAGTCTTAAAGGCTCACGGTAGCACAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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3UTR TCA 72 bp | AGCCTCACATTCCTAAACCACCTCTGGCACTTTTCTTaGATTAAGTCAAGGCGTACACAGCTCCGAAAGAAA | + |
Preference number: 3 (lower is better) Translates to: SLTFLNHLWHFS*IKSRRTQLRKK Trigger: TTTCTTTCGGAGCTGTGTACGCCTTGACTTAATTCAAGAAAAGTGCCAGAGGTGGTTTAGGAATGTGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR CCA 90 bp | GGTTCCAGGAAGATGGCCATGAGGACTCGCAGATATGTCTCCTCGGACCTGGAAACAAGGCGAGGCTCCTaGCGGGCAGTGACCATGTGT | + |
Preference number: 4 (lower is better) Translates to: GSRKMAMRTRRYVSSDLETRRGS*RAVTMC Trigger: ACACATGGTCACTGCCCGCCAGGAGCCTCGCCTTGT...TTCCAGGTCCGAGGAGACATATCTGCGAGTCCTCATGGCCATCTTCCTGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR TCA 90 bp | GGTTCCAGGAAGATGGCCATGAGGACTCGCAGATATGTCTCCTCGGACCTGGAAGAAAGCCTCACAGCCTaGCACCACGATGTTTGGCCT | + |
Preference number: 4 (lower is better) Translates to: GSRKMAMRTRRYVSSDLEESLTA*HHDVWP Trigger: AGGCCAAACATCGTGGTGTCAGGCTGTGAGGCTTTC...TTCCAGGTCCGAGGAGACATATCTGCGAGTCCTCATGGCCATCTTCCTGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR GCA 90 bp | AGCTTTCGAGCTGTGTCTTTAAACTTCAGCAATCGTAGAGGCAGGAATGAGAAAGACACCGTGCCCACCTaGTGCAGCTGCCGGCGCCGC | + |
Preference number: 4 (lower is better) Translates to: SFRAVSLNFSNRRGRNEKDTVPT*CSCRRR Trigger: GCGGCGCCGGCAGCTGCAGCAGGTGGGCACGGTGTC...TTTCTCATTCCTGCCTCTACGATTGCTGAAGTTTAAAGACACAGCTCGAAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR TCA 90 bp | TTATTAATGACAATGGAACCACACAGCTGTAAGAGAGCTAACTCGGCTCCATGTGCTCCTGGCGGGCAGTaGCCATGTGTCCGTCCTCCT | + |
Preference number: 4 (lower is better) Translates to: LLMTMEPHSCKRANSAPCAPGGQ*PCVRPP Trigger: AGGAGGACGGACACATGGTCACTGCCCGCCAGGAGC...ACATGGAGCCGAGTTAGCTCTCTTACAGCTGTGTGGTTCCATTGTCATTAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR GCA 90 bp | GAGCCTTTAAGACTGAGTTCATGGTTTCTCCTTGTTCCTTCTTCCGAAGGAAGATCAGGTGGACAGGGCTaGAGTCCGGGTAGGCTACCT | + |
Preference number: 4 (lower is better) Translates to: EPLRLSSWFLLVPSSEGRSGGQG*SPGRLP Trigger: AGGTAGCCTACCCGGACTGCAGCCCTGTCCACCTGA...TCTTCCTTCGGAAGAAGGAACAAGGAGAAACCATGAACTCAGTCTTAAAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR TCA 90 bp | GCACATTCCCTGCACATTCAGGGCAAGAGGGCTCCTTTTCTTACCTTTCTCAAGCACAATCTCTGCCTTTaGTGTCGAGACCAAACAGCC | + |
Preference number: 4 (lower is better) Translates to: AHSLHIQGKRAPFLTFLKHNLCL*CRDQTA Trigger: GGCTGTTTGGTCTCGACATCAAAGGCAGAGATTGTG...CTTGAGAAAGGTAAGAAAAGGAGCCCTCTTGCCCTGAATGTGCAGGGAATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR CCA 90 bp | GCTTTCGTGAGCATGCGAGCACATCAGATATGTGCACATTCCCTGCACATTCAGCTTCAGGGTCTCCAGTaGCTCCTTCCTGTCTATGAT | + |
Preference number: 4 (lower is better) Translates to: AFVSMRAHQICAHSLHIQLQGLQ*LLPVYD Trigger: ATCATAGACAGGAAGGAGCCACTGGAGACCCTGAAG...CTGAATGTGCAGGGAATGTGCACATATCTGATGTGCTCGCATGCTCACGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR TCA 90 bp | AAAAGTGGCAGCTTTCGAGCTGTGTCTTTAAACTTCAGCAATCGTAGAGGCAGGAATTGTTCTCCAGGGTaGTGGAGACCAGCACAAGGC | + |
Preference number: 4 (lower is better) Translates to: KSGSFRAVSLNFSNRRGRNCSPG*WRPAQG Trigger: GCCTTGTGCTGGTCTCCATCACCCTGGAGAACAATT...CCTGCCTCTACGATTGCTGAAGTTTAAAGACACAGCTCGAAAGCTGCCACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR GCA 90 bp | ATGTGCACATTCCCTGCACATTCAGGGCAAGAGGGCTCCTTTTCTTACCTTTCTATTGGCAGAACTATCTaGTCCATGCCTGGAGCTTCC | + |
Preference number: 4 (lower is better) Translates to: MCTFPAHSGQEGSFSYLSIGRTI*SMPGAS Trigger: GGAAGCTCCAGGCATGGAGCAGATAGTTCTGCCAAT...AGAAAGGTAAGAAAAGGAGCCCTCTTGCCCTGAATGTGCAGGGAATGTGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR CCA 90 bp | TTATTAATGACAATGGAACCACACAGCTGTAAGAGAGCTAACTCGGCTCCATGTTATCTGCTCCATGCCTaGAGCTTCCAGCGTCAGGTA | + |
Preference number: 4 (lower is better) Translates to: LLMTMEPHSCKRANSAPCYLLHA*SFQRQV Trigger: TACCTGACGCTGGAAGCTCCAGGCATGGAGCAGATA...ACATGGAGCCGAGTTAGCTCTCTTACAGCTGTGTGGTTCCATTGTCATTAATAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR CCA 90 bp | ATGTGCACATTCCCTGCACATTCAGGGCAAGAGGGCTCCTTTTCTTACCTTTCTAGAAGGGAGCTTGATTaGCAGAACTATCTGCTCCAT | + |
Preference number: 4 (lower is better) Translates to: MCTFPAHSGQEGSFSYLSRRELD*QNYLLH Trigger: ATGGAGCAGATAGTTCTGCCAATCAAGCTCCCTTCT...AGAAAGGTAAGAAAAGGAGCCCTCTTGCCCTGAATGTGCAGGGAATGTGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR CCA 90 bp | GAGCCTTTAAGACTGAGTTCATGGTTTCTCCTTGTTCCTTCTTCCGAAGGAAGATATGATGCCGGTGTCTaGGTCCACTGTAGTCAGAAC | + |
Preference number: 4 (lower is better) Translates to: EPLRLSSWFLLVPSSEGRYDAGV*VHCSQN Trigger: GTTCTGACTACAGTGGACCCAGACACCGGCATCATA...TCTTCCTTCGGAAGAAGGAACAAGGAGAAACCATGAACTCAGTCTTAAAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR GCA 90 bp | GCTTTCGTGAGCATGCGAGCACATCAGATATGTGCACATTCCCTGCACATTCAGTTGTTCTTCCTTTCATaGTGGTATCAAACTGAACCA | + |
Preference number: 4 (lower is better) Translates to: AFVSMRAHQICAHSLHIQLFFLS*WYQTEP Trigger: TGGTTCAGTTTGATACCAGCATGAAAGGAAGAACAA...CTGAATGTGCAGGGAATGTGCACATATCTGATGTGCTCGCATGCTCACGAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS CCA 90 bp | CTTCAGGGTCTCCAGTGGCTCCTTCCTGTCTATGATGCCGGTGTCTaGGTCCACTGTAGTCAGAACGCACCTGGGACAGCTCAACACCCT | + |
Preference number: 5 (lower is better) Translates to: LQGLQWLLPVYDAGV*VHCSQNAPGTAQHP Trigger: AGGGTGTTGAGCTGTCCCAGGTGCGTTCTGACTACAGTGGACCCAGACACCGGCATCATAGACAGGAAGGAGCCACTGGAGACCCTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS TCA 90 bp | GACCAAACAGCCTGCAGTTGTGGATCTTATTCGAAGAAGGGAGCTTaGTTGGCAGAACTATCTGCTCCATGCCTGGAGCTTCCAGCGTCA | + |
Preference number: 5 (lower is better) Translates to: DQTACSCGSYSKKGA*LAELSAPCLELPAS Trigger: TGACGCTGGAAGCTCCAGGCATGGAGCAGATAGTTCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGCAGGCTGTTTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CCA 90 bp | AAACAGCCTGCAGTTGTGGATCTTATTCGAAGAAGGGAGCTTGATTaGCAGAACTATCTGCTCCATGCCTGGAGCTTCCAGCGTCAGGTA | + |
Preference number: 5 (lower is better) Translates to: KQPAVVDLIRRRELD*QNYLLHAWSFQRQV Trigger: TACCTGACGCTGGAAGCTCCAGGCATGGAGCAGATAGTTCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGCAGGCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS-3UTR CAA 90 bp | CTGCACATTCAGGGCAAGAGGGCTCCTTTTCTTACCTTTCTCAAGCGACAGACCGGTAAAGTTTCTTCGTaGTTCTTCCTTTCATGCTGG | + |
Preference number: 5 (lower is better) Translates to: LHIQGKRAPFLTFLKRQTGKVSS*FFLSCW Trigger: CCAGCATGAAAGGAAGAACAACGAAGAAACTTTACC...GGTCTGTCGCTTGAGAAAGGTAAGAAAAGGAGCCCTCTTGCCCTGAATGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS TCA 90 bp | GCTCCCAAGCTTCTCCACCGAGAAATACATCCCAAAAAGTGGAGATaGCTGGTATATACTCTTCACAGAAGGATCACACAGGCGATAGCT | + |
Preference number: 5 (lower is better) Translates to: APKLLHREIHPKKWR*LVYTLHRRITQAIA Trigger: AGCTATCGCCTGTGTGATCCTTCTGTGAAGAGTATATACCAGTCATCTCCACTTTTTGGGATGTATTTCTCGGTGGAGAAGCTTGGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS-3UTR CAA 90 bp | ATGTGCACATTCCCTGCACATTCAGGGCAAGAGGGCTCCTTTTCTTACCTTTCTCCAAACAGCCTGCAGTaGTGGATCTTATTCGAAGAA | + |
Preference number: 5 (lower is better) Translates to: MCTFPAHSGQEGSFSYLSPNSLQ*WILFEE Trigger: TTCTTCGAATAAGATCCACAACTGCAGGCTGTTTGG...AGAAAGGTAAGAAAAGGAGCCCTCTTGCCCTGAATGTGCAGGGAATGTGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS CCA 90 bp | AACTTTCAGAAGGGTAAAGTTTCTTCGTTGTTCTTCCTTTCATGCTaGTATCAAACTGAACCAACCTGTAGGCTTGCGTCTTCAGGTAGT | + |
Preference number: 5 (lower is better) Translates to: NFQKGKVSSLFFLSC*YQTEPTCRLASSGS Trigger: ACTACCTGAAGACGCAAGCCTACAGGTTGGTTCAGTTTGATACCAGCATGAAAGGAAGAACAACGAAGAAACTTTACCCTTCTGAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS GCA 72 bp | CCCAGCGCGGCGACGCCGAGCCAGGTGGACCGCGGCTaGCCAGGGAGGCCGAGGCGAGCCAGAGCCGTAGAG | + |
Preference number: 6 (lower is better) Translates to: PSAATPSQVDRG*PGRPRRARAVE Trigger: CTCTACGGCTCTGGCTCGCCTCGGCCTCCCTGGGCAGCCGCGGTCCACCTGGCTCGGCGTCGCCGCGCTGGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS CCA 72 bp | TCCAGGGTGATGGAGACCAGCACAAGGCGAGGCTCCTaGCGGGCAGTGACCATGTGTCCGTCCTCCTTCACC | + |
Preference number: 6 (lower is better) Translates to: SRVMETSTRRGS*RAVTMCPSSFT Trigger: GGTGAAGGAGGACGGACACATGGTCACTGCCCGCCAGGAGCCTCGCCTTGTGCTGGTCTCCATCACCCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS TCA 72 bp | TGGAGACCAGCACAAGGCGAGGCTCCTGGCGGGCAGTaGCCATGTGTCCGTCCTCCTTCACCACCATCCAGA | + |
Preference number: 6 (lower is better) Translates to: WRPAQGEAPGGQ*PCVRPPSPPSR Trigger: TCTGGATGGTGGTGAAGGAGGACGGACACATGGTCACTGCCCGCCAGGAGCCTCGCCTTGTGCTGGTCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS TCA 72 bp | CTGGAGCTTCCAGCGTCAGGTAATTGTTCTCCAGGGTaGTGGAGACCAGCACAAGGCGAGGCTCCTGGCGGG | + |
Preference number: 6 (lower is better) Translates to: LELPASGNCSPG*WRPAQGEAPGG Trigger: CCCGCCAGGAGCCTCGCCTTGTGCTGGTCTCCATCACCCTGGAGAACAATTACCTGACGCTGGAAGCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CCA 72 bp | CTCCAGTGGCTCCTTCCTGTCTATGATGCCGGTGTCTaGGTCCACTGTAGTCAGAACGCACCTGGGACAGCT | + |
Preference number: 6 (lower is better) Translates to: LQWLLPVYDAGV*VHCSQNAPGTA Trigger: AGCTGTCCCAGGTGCGTTCTGACTACAGTGGACCCAGACACCGGCATCATAGACAGGAAGGAGCCACTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS GCA 72 bp | CGACTAAGGAGGCTTCAGAAATCAGGTGGACAGGGCTaGAGTCCGGGTAGGCTACCTCATAGTTCTGAAGGT | + |
Preference number: 6 (lower is better) Translates to: RLRRLQKSGGQG*SPGRLPHSSEG Trigger: ACCTTCAGAACTATGAGGTAGCCTACCCGGACTGCAGCCCTGTCCACCTGATTTCTGAAGCCTCCTTAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CAA 90 bp | AGACCAAACAGCCTGCAGTTGTGGATCTTATTCGAAGAAGGGAGCTaGATTGGCAGAACTATCTGCTCCATGCCTGGAGCTTCCAGCGTC | + |
Preference number: 6 (lower is better) Translates to: RPNSLQLWILFEEGS*IGRTICSMPGASSV Trigger: GACGCTGGAAGCTCCAGGCATGGAGCAGATAGTTCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGCAGGCTGTTTGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS TCA 72 bp | ACCACTGAGCTACCTCATCGCCACAATCTCTGCCTTTaGTGTCGAGACCAAACAGCCTGCAGTTGTGGATCT | + |
Preference number: 6 (lower is better) Translates to: TTELPHRHNLCL*CRDQTACSCGS Trigger: AGATCCACAACTGCAGGCTGTTTGGTCTCGACATCAAAGGCAGAGATTGTGGCGATGAGGTAGCTCAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS TCA 72 bp | GCCTGCAGTTGTGGATCTTATTCGAAGAAGGGAGCTTaGTTGGCAGAACTATCTGCTCCATGCCTGGAGCTT | + |
Preference number: 6 (lower is better) Translates to: ACSCGSYSKKGA*LAELSAPCLEL Trigger: AAGCTCCAGGCATGGAGCAGATAGTTCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CCA 72 bp | GCAGTTGTGGATCTTATTCGAAGAAGGGAGCTTGATTaGCAGAACTATCTGCTCCATGCCTGGAGCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: AVVDLIRRRELD*QNYLLHAWSFQ Trigger: CTGGAAGCTCCAGGCATGGAGCAGATAGTTCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CAA 72 bp | AGCCTGCAGTTGTGGATCTTATTCGAAGAAGGGAGCTaGATTGGCAGAACTATCTGCTCCATGCCTGGAGCT | + |
Preference number: 6 (lower is better) Translates to: SLQLWILFEEGS*IGRTICSMPGA Trigger: AGCTCCAGGCATGGAGCAGATAGTTCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CAA 90 bp | TGTTCTTCCTTTCATGCTGGTATCAAACTGAACCAACCTGTAGGCTaGCGTCTTCAGGTAGTTGGTGAACCACTGAGCTACCTCATCGCC | + |
Preference number: 6 (lower is better) Translates to: CSSFHAGIKLNQPVG*RLQVVGEPLSYLIA Trigger: GGCGATGAGGTAGCTCAGTGGTTCACCAACTACCTGAAGACGCAAGCCTACAGGTTGGTTCAGTTTGATACCAGCATGAAAGGAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS TCA 72 bp | CGAAAGCCTCACAGCCTGACACCACGATGTTTGGCCTaGAATATTCCATCTTCACTTTCTTCTTCAGCCTGG | + |
Preference number: 6 (lower is better) Translates to: RKPHSLTPRCLA*NIPSSLSSSAW Trigger: CCAGGCTGAAGAAGAAAGTGAAGATGGAATATTTCAGGCCAAACATCGTGGTGTCAGGCTGTGAGGCTTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CCA 72 bp | CTGCCTTTGATGTCGAGACCAAACAGCCTGCAGTTGTaGATCTTATTCGAAGAAGGGAGCTTGATTGGCAGA | + |
Preference number: 6 (lower is better) Translates to: LPLMSRPNSLQL*ILFEEGSLIGR Trigger: TCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGCAGGCTGTTTGGTCTCGACATCAAAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CAA 90 bp | TCGCCACAATCTCTGCCTTTGATGTCGAGACCAAACAGCCTGCAGTaGTGGATCTTATTCGAAGAAGGGAGCTTGATTGGCAGAACTATC | + |
Preference number: 6 (lower is better) Translates to: SPQSLPLMSRPNSLQ*WILFEEGSLIGRTI Trigger: GATAGTTCTGCCAATCAAGCTCCCTTCTTCGAATAAGATCCACAACTGCAGGCTGTTTGGTCTCGACATCAAAGGCAGAGATTGTGGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CAA 72 bp | TTTCATGCTGGTATCAAACTGAACCAACCTGTAGGCTaGCGTCTTCAGGTAGTTGGTGAACCACTGAGCTAC | + |
Preference number: 6 (lower is better) Translates to: FHAGIKLNQPVG*RLQVVGEPLSY Trigger: GTAGCTCAGTGGTTCACCAACTACCTGAAGACGCAAGCCTACAGGTTGGTTCAGTTTGATACCAGCATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS GCA 72 bp | CAGAAGGGTAAAGTTTCTTCGTTGTTCTTCCTTTCATaGTGGTATCAAACTGAACCAACCTGTAGGCTTGCG | + |
Preference number: 6 (lower is better) Translates to: QKGKVSSLFFLS*WYQTEPTCRLA Trigger: CGCAAGCCTACAGGTTGGTTCAGTTTGATACCAGCATGAAAGGAAGAACAACGAAGAAACTTTACCCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CCA 72 bp | TCCACCGAGAAATACATCCCAAAAAGTGGAGATGACTaGTATATACTCTTCACAGAAGGATCACACAGGCGA | + |
Preference number: 6 (lower is better) Translates to: STEKYIPKSGDD*YILFTEGSHRR Trigger: TCGCCTGTGTGATCCTTCTGTGAAGAGTATATACCAGTCATCTCCACTTTTTGGGATGTATTTCTCGGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS TCA 72 bp | AATATTCCATCTTCACTTTCTTCTTCAGCCTGGTGTTaGGATCGACTAAGGAGGCTTCAGAAATCAGGTGGA | + |
Preference number: 6 (lower is better) Translates to: NIPSSLSSSAWC*DRLRRLQKSGG Trigger: TCCACCTGATTTCTGAAGCCTCCTTAGTCGATCTCAACACCAGGCTGAAGAAGAAAGTGAAGATGGAATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS TCA 72 bp | CTTCTCCACCGAGAAATACATCCCAAAAAGTGGAGATaGCTGGTATATACTCTTCACAGAAGGATCACACAG | + |
Preference number: 6 (lower is better) Translates to: LLHREIHPKKWR*LVYTLHRRITQ Trigger: CTGTGTGATCCTTCTGTGAAGAGTATATACCAGTCATCTCCACTTTTTGGGATGTATTTCTCGGTGGAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068725.10 |
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CDS CAA 72 bp | AAATATTCCATCTTCACTTTCTTCTTCAGCCTGGTGTaGAGATCGACTAAGGAGGCTTCAGAAATCAGGTGG | + |
Preference number: 6 (lower is better) Translates to: KYSIFTFFFSLV*RSTKEASEIRW Trigger: CCACCTGATTTCTGAAGCCTCCTTAGTCGATCTCAACACCAGGCTGAAGAAGAAAGTGAAGATGGAATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |
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CDS CAA 90 bp | CCTCATAGTTCTGAAGGTAACTTTCAGAAGGGTAAAGTTTCTTCGTaGTTCTTCCTTTCATGCTGGTATCAAACTGAACCAACCTGTAGG | + |
Preference number: 6 (lower is better) Translates to: PHSSEGNFQKGKVSS*FFLSCWYQTEPTCR Trigger: CCTACAGGTTGGTTCAGTTTGATACCAGCATGAAAGGAAGAACAACGAAGAAACTTTACCCTTCTGAAAGTTACCTTCAGAACTATGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068725.10 ENSMUST00000161821.4 |