Pregenerated sensors for MTARC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026621Ensembl transcript IDs: ENSMUST00000048462.13, ENSMUST00000110992.9, ENSMUST00000189492.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAAAGCTGTATTTGCCTGCTTTGTGGGCTGGCCCCAGGAAACATTaGAACAGACGGAAATCTGAAAGAAGAGAAACTTGGAACTGGCCG | + |
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Preference number: 1 (lower is better) Translates to: AKLYLPALWAGPRKH*NRRKSERRETWNWP Trigger: CGGCCAGTTCCAAGTTTCTCTTCTTTCAGATTTCCGTCTGTTTCAATGTTTCCTGGGGCCAGCCCACAAAGCAGGCAAATACAGCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR GCA 90 bp | CCGTCATTCCAACTTTACTTGGGAGAGTATTTAATTCCCGTTGTATaGACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: PSFQLYLGEYLIPVV*TMSRGNRTFWNILL Trigger: CAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAACGGGAATTAAATACTCTCCCAAGTAAAGTTGGAATGACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR CCA 90 bp | CCTTTTTCTTCTCTTTCCCAAAAGAAGGCTAGGGAGATGATGTCTTaGCAAGTGAATTCCGACGTAGAAGGATTACTCCGTATTTATAAA | + |
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Preference number: 1 (lower is better) Translates to: PFSSLSQKKAREMMS*QVNSDVEGLLRIYK Trigger: TTTATAAATACGGAGTAATCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTGGGAAAGAGAAGAAAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTGTCCCCACATGCTAGGAGGGAGATGATGTCTTaGCAAGTGAATTCCGACGTA | + |
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Preference number: 2 (lower is better) Translates to: PRRRYLPLWCHYLSPHARREMMS*QVNSDV Trigger: TACGTCGGAATTCACTTGCCAAGACATCATCTCCCT...CCTAGCATGTGGGGACAGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCCACCATTTTCCTGGGCAAGATCAAATCTCATCTTAGACACCCAGGCGGAGGCCTGCTTTGTGGGCTaGCCCCAGGAAACATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: EPPFSWARSNLILDTQAEACFVG*PQETLK Trigger: TTTCAATGTTTCCTGGGGCCAGCCCACAAAGCAGGC...CTCCGCCTGGGTGTCTAAGATGAGATTTGATCTTGCCCAGGAAAATGGTGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR CAA 90 bp | TCCCTCTCTGGTGTCACTATCTGTCCCCACATGCTAGGAACGATCTaGAATCCTTTAGTGAGGCGCATCAACACTTTGCTTCAAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SLSGVTICPHMLGTI*NPLVRRINTLLQEW Trigger: CCACTCTTGAAGCAAAGTGTTGATGCGCCTCACTAAAGGATTCAAGATCGTTCCTAGCATGTGGGGACAGATAGTGACACCAGAGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR TCA 90 bp | AATCTCATCTTAGACACCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTGGCCCCAGGAAACATTaGAACAGACGGAAATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: NLILDTQAEVSPSLVSLSGPRKH*NRRKSE Trigger: TTCAGATTTCCGTCTGTTTCAATGTTTCCTGGGGCC...AGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGGTGTCTAAGATGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTGGGCTAAAGGGTCTGTCAAACTTCACACTGTCAGTAAGCAACAGCATCTCGCAAAGCTGTATTTaGCTGCTTTGTGGGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: VLGLKGLSNFTLSVSNSISQSCI*LLCGLA Trigger: GGCCAGCCCACAAAGCAGGCAAATACAGCTTTGCGA...GATGCTGTTGCTTACTGACAGTGTGAAGTTTGACAGACCCTTTAGCCCAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR CCA 90 bp | GTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTGCCTGCTTTGTGGGCTaGCCCCAGGAAACATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: VVCTMSRGNRTFWNILLAACFVG*PQETLK Trigger: TTTCAATGTTTCCTGGGGCCAGCCCACAAAGCAGGC...AGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTCATCTTAGACACCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTTCTGGAACATTCTTCTaGCTTACACAGTGTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NLILDTQAEVSPSLVSLSSGTFF*LTQCPS Trigger: GGAGGGACACTGTGTAAGCCAGAAGAATGTTCCAGA...AGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGGTGTCTAAGATGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR CAA 90 bp | GCCGACCTACCATTCACTACCACTAGGGGGCGCCACCATTTCATTTaGCTCATATTAAGAGAGCCACCATTTTCCTGGGCAAGATCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ADLPFTTTRGRHHFI*LILREPPFSWARSN Trigger: ATTTGATCTTGCCCAGGAAAATGGTGGCTCTCTTAATATGAGCAAAATGAAATGGTGGCGCCCCCTAGTGGTAGTGAATGGTAGGTCGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCATCTTAGACACCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTGTATCCAAAGAACAGGCTaGAGAACTGTTTCAAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: SHLRHPGGGISLSGVTICIQRTG*RTVSSD Trigger: ATCGCTTGAAACAGTTCTTCAGCCTGTTCTTTGGAT...ACAGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGGTGTCTAAGATGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR CAA 90 bp | ATGCTAGGAACGATCTTGAATCCTTTAGTGAGGCGCATCAACACTTaGCTTCAAGAGTGGAAACACCTTTTTCACAGAGCTGAGAGCCCG | + |
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Preference number: 2 (lower is better) Translates to: MLGTILNPLVRRINT*LQEWKHLFHRAESP Trigger: CGGGCTCTCAGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGTTGATGCGCCTCACTAAAGGATTCAAGATCGTTCCTAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR TCA 90 bp | TGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGGCCCCAGGAAACATTaGAACAGACGGAAATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CTMSRGNRTFWNILLAYTGPRKH*NRRKSE Trigger: TTCAGATTTCCGTCTGTTTCAATGTTTCCTGGGGCC...TGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTGGCCCCAGGAAACATTaGAACAGACGGAAATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VVCTMSRGNRTFWNILLAGPRKH*NRRKSE Trigger: TTCAGATTTCCGTCTGTTTCAATGTTTCCTGGGGCC...AGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR GCA 90 bp | TTAATTCCCGTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTTCGCAAAGCTGTATTTaGCTGCTTTGTGGGCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LIPVVCTMSRGNRTFWNISQSCI*LLCGLA Trigger: GGCCAGCCCACAAAGCAGGCAAATACAGCTTTGCGA...AATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAACGGGAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTTTGCTTCAAGAGTGGAAACACCTTTTTCACAGAGCTGAGAGCCCGTCTGAGGGAGATGATGTCTTaGCAAGTGAATTCCGACGTA | + |
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Preference number: 2 (lower is better) Translates to: TLCFKSGNTFFTELRARLREMMS*QVNSDV Trigger: TACGTCGGAATTCACTTGCCAAGACATCATCTCCCT...CAGACGGGCTCTCAGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCCACCATTTTCCTGGGCAAGATCAAATCTCATCTTAGACACCCAGGCGGAGGGTAACAGAACATTCTaGAACATTCTTCTGGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: EPPFSWARSNLILDTQAEGNRTF*NILLAY Trigger: GTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACC...CTCCGCCTGGGTGTCTAAGATGAGATTTGATCTTGCCCAGGAAAATGGTGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR CCA 90 bp | ACACTTTGCTTCAAGAGTGGAAACACCTTTTTCACAGAGCTGAGAGCCCGTCTGGAAAGAAGAGAAACTTaGAACTGGCCGATCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: TLCFKSGNTFFTELRARLERRET*NWPIQR Trigger: TCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTC...CAGACGGGCTCTCAGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR TCA 90 bp | TGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAATCCAAAGAACAGGCTaGAGAACTGTTTCAAGCGAT | + |
|
Preference number: 2 (lower is better) Translates to: CTMSRGNRTFWNILLAYTIQRTG*RTVSSD Trigger: ATCGCTTGAAACAGTTCTTCAGCCTGTTCTTTGGAT...TGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGAAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGAGAAAGAAGAGAAACTTaGAACTGGCCGATCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: QKKAREMMSWQVNSDVEGERRET*NWPIQR Trigger: TCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTC...TCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCCAAAAGAAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAAGAAGAGAAACTTaGAACTGGCCGATCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LSQKKAREMMSWQVNSDVERRET*NWPIQR Trigger: TCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTC...TACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTGGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCCACCATTTTCCTGGGCAAGATCAAATCTCATCTTAGACACCCAGGCGGAGCTGTATTTGCCTGCTTaGTGGGCTGGCCCCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: EPPFSWARSNLILDTQAELYLPA*WAGPRK Trigger: TTTCCTGGGGCCAGCCCACAAAGCAGGCAAATACAG...CTCCGCCTGGGTGTCTAAGATGAGATTTGATCTTGCCCAGGAAAATGGTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR GCA 72 bp | AAACACCTTTTTCACAGAGCTGAGAGCCCGTCTGGATaGTGTAGAGAGCTGGCTTTGACCCTGACACTTCGT | + |
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Preference number: 3 (lower is better) Translates to: KHLFHRAESPSG*CRELALTLTLR Trigger: ACGAAGTGTCAGGGTCAAAGCCAGCTCTCTACAGCATCCAGACGGGCTCTCAGCTCTGTGAAAAAGGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR GCA 72 bp | CATAACAGGGACCTGCTAAGTTCGCAAAGCTGTATTTaGCTGCTTTGTGGGCTGGCCCCAGGAAACATTGAA | + |
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Preference number: 3 (lower is better) Translates to: HNRDLLSSQSCI*LLCGLAPGNIE Trigger: TTCAATGTTTCCTGGGGCCAGCCCACAAAGCAGGCAAATACAGCTTTGCGAACTTAGCAGGTCCCTGTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR TCA 72 bp | GGCTGGCCCCAGGAAACATTGAAACAGACGGAAATCTaGAAGAAGAGAAACTTGGAACTGGCCGATCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GWPQETLKQTEI*KKRNLELADPK Trigger: CTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTCAGATTTCCGTCTGTTTCAATGTTTCCTGGGGCCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR CCA 72 bp | CCTTTAGTGAGGCGCATCAACACTTTGCTTCAAGAGTaGAAACACCTTTTTCACAGAGCTGAGAGCCCGTCT | + |
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Preference number: 3 (lower is better) Translates to: PLVRRINTLLQE*KHLFHRAESPS Trigger: AGACGGGCTCTCAGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGTTGATGCGCCTCACTAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR CAA 90 bp | GTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTGTCCCTCCCTTTTTCTGTATTTGCCTGCTTaGTGGGCTGGCCCCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: VTEHSGTFFWLTQCPSLFLYLPA*WAGPRK Trigger: TTTCCTGGGGCCAGCCCACAAAGCAGGCAAATACAG...AAAAAGGGAGGGACACTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CAA 90 bp | ACCACTAGGGGGCGCCACCATTTCATTTTGCTCATATTAAGAGAGCCACCATTTAGGCGCATCAACACTTaGCTTCAAGAGTGGAAACAC | + |
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Preference number: 3 (lower is better) Translates to: TTRGRHHFILLILREPPFRRINT*LQEWKH Trigger: GTGTTTCCACTCTTGAAGCAAAGTGTTGATGCGCCT...AAATGGTGGCTCTCTTAATATGAGCAAAATGAAATGGTGGCGCCCCCTAGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| 3UTR-3UTR CAA 90 bp | GGCAATATGATAATCCCTTCATTCTACAAGAAACATAACAGGGACCTGCTAAGTCTGTATTTGCCTGCTTaGTGGGCTGGCCCCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: GNMIIPSFYKKHNRDLLSLYLPA*WAGPRK Trigger: TTTCCTGGGGCCAGCCCACAAAGCAGGCAAATACAG...ACTTAGCAGGTCCCTGTTATGTTTCTTGTAGAATGAAGGGATTATCATATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR TCA 72 bp | TATTTGCCTGCTTTGTGGGCTGGCCCCAGGAAACATTaGAACAGACGGAAATCTGAAAGAAGAGAAACTTGG | + |
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Preference number: 3 (lower is better) Translates to: YLPALWAGPRKH*NRRKSERRETW Trigger: CCAAGTTTCTCTTCTTTCAGATTTCCGTCTGTTTCAATGTTTCCTGGGGCCAGCCCACAAAGCAGGCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR CCA 72 bp | TCTCTTTCCCAAAAGAAGGCTAGGGAGATGATGTCTTaGCAAGTGAATTCCGACGTAGAAGGATTACTCCGT | + |
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Preference number: 3 (lower is better) Translates to: SLSQKKAREMMS*QVNSDVEGLLR Trigger: ACGGAGTAATCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTGGGAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTCATCTTAGACACCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTTCATTCCAACTTTACTaGGGAGAGTATTTAATTCCC | + |
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Preference number: 3 (lower is better) Translates to: NLILDTQAEVSPSLVSLSSFQLY*GEYLIP Trigger: GGGAATTAAATACTCTCCCAAGTAAAGTTGGAATGA...AGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGGTGTCTAAGATGAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR CCA 90 bp | AGAGCTGAGAGCCCGTCTGGATGCTGTAGAGAGCTGGCTTTGACCCTGACACTTCCATGCACTCTGCACTaGAGGAGTGGGTTTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RAESPSGCCRELALTLTLPCTLH*RSGFVA Trigger: TGCCACAAACCCACTCCTCCAGTGCAGAGTGCATGG...AAGTGTCAGGGTCAAAGCCAGCTCTCTACAGCATCCAGACGGGCTCTCAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR TCA 90 bp | GCTGAGAGCCCGTCTGGATGCTGTAGAGAGCTGGCTTTGACCCTGACACTTCGTTTGTGTAAGCTGCACTaGGAGTCAAGGTGTCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AESPSGCCRELALTLTLRLCKLH*ESRCRP Trigger: AGGACGACACCTTGACTCTCAGTGCAGCTTACACAA...ACGAAGTGTCAGGGTCAAAGCCAGCTCTCTACAGCATCCAGACGGGCTCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR GCA 90 bp | GAGCCACCATTTTCCTGGGCAAGATCAAATCTCATCTTAGACACCCAGGCGGAGCCAGGCCATGCACTCTaGACTGGAGGAGTGGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: EPPFSWARSNLILDTQAEPGHAL*TGGVGL Trigger: CAAACCCACTCCTCCAGTGCAGAGTGCATGGCCTGG...CTCCGCCTGGGTGTCTAAGATGAGATTTGATCTTGCCCAGGAAAATGGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR GCA 90 bp | CTGAAAGAAGAGAAACTTGGAACTGGCCGATCCAAAGAACAGGCTGAAGAACTGCTTCTGGGGCGCATGTaGGGCTCGAAGTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LKEEKLGTGRSKEQAEELLLGRM*GSKCTR Trigger: CCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAG...CAGTTCTTCAGCCTGTTCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS-3UTR GCA 90 bp | TGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTGTCCCGTAGATCCAGAGCTGTaGCACCGTTCCCACTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CPGVTEHSGTFFWLTQCPVDPEL*HRSHLL Trigger: CAGCAAGTGGGAACGGTGGCACAGCTCTGGATCTAC...GGGACACTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR GCA 90 bp | AAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGATTACTCACCAATCGAGGCTCCTaGCGGGCAGTGACCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: KAREMMSWQVNSDVEGLLTNRGS*RAVTMF Trigger: GAACATGGTCACTGCCCGGCAGGAGCCTCGATTGGT...GAGTAATCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR GCA 90 bp | ACACTTTGCTTCAAGAGTGGAAACACCTTTTTCACAGAGCTGAGAGCCCGTCTGCCTCTCCACAATCCCTaGCCTGTATCTCCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TLCFKSGNTFFTELRARLPLHNP*PVSPGH Trigger: ATGGCCTGGAGATACAGGGCAGGGATTGTGGAGAGG...CAGACGGGCTCTCAGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR GCA 90 bp | TGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTGTCCCCCTCTCCACAATCCCTaGCCTGTATCTCCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CPGVTEHSGTFFWLTQCPPLHNP*PVSPGH Trigger: ATGGCCTGGAGATACAGGGCAGGGATTGTGGAGAGG...GGGACACTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS-3UTR GCA 90 bp | TTAATTCCCGTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGGGCGCATGTaGGGCTCGAAGTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LIPVVCTMSRGNRTFWNILLGRM*GSKCTR Trigger: CCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAG...AATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAACGGGAATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTGCTTCAAGAGTGGAAACACCTTTTTCACAGAGCTGAGAGCCCGTCTGCCATGCACTCTGCACTaGAGGAGTGGGTTTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLCFKSGNTFFTELRARLPCTLH*RSGFVA Trigger: TGCCACAAACCCACTCCTCCAGTGCAGAGTGCATGG...CAGACGGGCTCTCAGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR TCA 90 bp | TCTCATCTTAGACACCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTGTTGTTCCCCTCTTCATTaGTCACGAGCCAAAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLRHPGGGISLSGVTICCSPLH*SRAKTC Trigger: ACAGGTTTTGGCTCGTGATCAATGAAGAGGGGAACA...ACAGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGGTGTCTAAGATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR TCA 90 bp | GTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTAAGCTGCTGACCCACTaGGCTGCATCCTCTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VVCTMSRGNRTFWNILLAKLLTH*AASSPQ Trigger: TTGTGGAGAGGATGCAGCTCAGTGGGTCAGCAGCTT...AGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | TGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAAAGCTGCTGACCCACTaGGCTGCATCCTCTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CTMSRGNRTFWNILLAYTKLLTH*AASSPQ Trigger: TTGTGGAGAGGATGCAGCTCAGTGGGTCAGCAGCTT...TGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | GCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTCTTCAAGAAGCTGCTaGCCCACTGAGCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: APCPGVTEHSGTFFWLTQSSRSC*PTELHP Trigger: AGGATGCAGCTCAGTGGGTCAGCAGCTTCTTGAAGA...CTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCAAAAGAAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGCTGACCCACTGAGCTaGATCCTCTCCACAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQKKAREMMSWQVNSDVADPLS*ILSTIP Trigger: AGGGATTGTGGAGAGGATGCAGCTCAGTGGGTCAGC...TACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | TGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGCTGACCCACTGAGCTaGATCCTCTCCACAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTMSRGNRTFWNILLAYTADPLS*ILSTIP Trigger: AGGGATTGTGGAGAGGATGCAGCTCAGTGGGTCAGC...TGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | CTCATCTTAGACACCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTGTCGAGATCTTCCAAGGATaGCTCAGAAAGGACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LILDTQAEVSPSLVSLSVEIFQG*LRKDQE Trigger: TTCTTGGTCCTTTCTGAGGCATCCTTGGAAGATCTC...GACAGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGGTGTCTAAGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGAAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGACCATGCACTCTGCACTaGAGGAGTGGGTTTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKKAREMMSWQVNSDVEGPCTLH*RSGFVA Trigger: TGCCACAAACCCACTCCTCCAGTGCAGAGTGCATGG...TCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGAAGAGAAACTTGGAACTGGCCGATCCAAAGAACAGGCTGAAGAACTGTCTTCAAGAAGCTGCTaGCCCACTGAGCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKEEKLGTGRSKEQAEELSSRSC*PTELHP Trigger: AGGATGCAGCTCAGTGGGTCAGCAGCTTCTTGAAGA...CAGTTCTTCAGCCTGTTCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGATTACTCCAGGGTCTCCCACTCTaGTTGTCCCTGGATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAREMMSWQVNSDVEGLLQGLPL*LSLDFP Trigger: TGGAAAATCCAGGGACAATCAGAGTGGGAGACCCTG...GAGTAATCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGAAGAGAAACTTGGAACTGGCCGATCCAAAGAACAGGCTGAAGAACTGCAGGGTCTCCCACTCTaGTTGTCCCTGGATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKEEKLGTGRSKEQAEELQGLPL*LSLDFP Trigger: TGGAAAATCCAGGGACAATCAGAGTGGGAGACCCTG...CAGTTCTTCAGCCTGTTCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTCAGGGTCTCCCACTCTaGTTGTCCCTGGATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVCTMSRGNRTFWNILLAQGLPL*LSLDFP Trigger: TGGAAAATCCAGGGACAATCAGAGTGGGAGACCCTG...AGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR CCA 90 bp | GCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGCTTGCAGGACTTGATTaGGTAGATCCAGAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: APCPGVTEHSGTFFWLTQLAGLD*VDPELC Trigger: GCACAGCTCTGGATCTACCCAATCAAGTCCTGCAAG...CTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTGTCCCCACATGCTAGGAGTATTGTCCAAAGATaGGTAACTTTCCATATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRRRYLPLWCHYLSPHARSIVQR*VTFHIV Trigger: CACTATATGGAAAGTTACCCATCTTTGGACAATACT...CCTAGCATGTGGGGACAGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| 3UTR CAA 72 bp | CCATTCACTACCACTAGGGGGCGCCACCATTTCATTTaGCTCATATTAAGAGAGCCACCATTTTCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFTTTRGRHHFI*LILREPPFSWA Trigger: TGCCCAGGAAAATGGTGGCTCTCTTAATATGAGCAAAATGAAATGGTGGCGCCCCCTAGTGGTAGTGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR TCA 90 bp | ACACTTTGCTTCAAGAGTGGAAACACCTTTTTCACAGAGCTGAGAGCCCGTCTGTGTTCCCCTCTTCATTaGTCACGAGCCAAAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLCFKSGNTFFTELRARLCSPLH*SRAKTC Trigger: ACAGGTTTTGGCTCGTGATCAATGAAGAGGGGAACA...CAGACGGGCTCTCAGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR TCA 90 bp | TGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACATTGTGTAAGCTGCACTaGGAGTCAAGGTGTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTMSRGNRTFWNILLAYTLCKLH*ESRCRP Trigger: AGGACGACACCTTGACTCTCAGTGCAGCTTACACAA...TGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | GTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTGTCCCTCCCTTTTTGTAGATCCAGAGCTGTaGCACCGTTCCCACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTEHSGTFFWLTQCPSLFVDPEL*HRSHLL Trigger: CAGCAAGTGGGAACGGTGGCACAGCTCTGGATCTAC...AAAAAGGGAGGGACACTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAATATGATAATCCCTTCATTCTACAAGAAACATAACAGGGACCTGCTACCAGGCCATGCACTCTaGACTGGAGGAGTGGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGNMIIPSFYKKHNRDLLPGHAL*TGGVGL Trigger: CAAACCCACTCCTCCAGTGCAGAGTGCATGGCCTGG...TAGCAGGTCCCTGTTATGTTTCTTGTAGAATGAAGGGATTATCATATTGCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | GTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTGTCCCTCCCTTTTTGCTGACCCACTGAGCTaGATCCTCTCCACAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTEHSGTFFWLTQCPSLFADPLS*ILSTIP Trigger: AGGGATTGTGGAGAGGATGCAGCTCAGTGGGTCAGC...AAAAAGGGAGGGACACTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | GGCAATATGATAATCCCTTCATTCTACAAGAAACATAACAGGGACCTGCTAAGTACCAATCGAGGCTCCTaGCGGGCAGTGACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNMIIPSFYKKHNRDLLSTNRGS*RAVTMF Trigger: GAACATGGTCACTGCCCGGCAGGAGCCTCGATTGGT...ACTTAGCAGGTCCCTGTTATGTTTCTTGTAGAATGAAGGGATTATCATATTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGAGTCCTTTGTGTAAGCTaGACTGAGAGTCAAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKKAREMMSWQVNSDVEGVLCVS*TESQGV Trigger: GACACCTTGACTCTCAGTGCAGCTTACACAAAGGAC...TCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | GGATTACTCCGTATTTATAAACAGGGCAATATGATAATCCCTTCATTCTACAAGCTTCTGGGGCGCATGTaGGGCTCGAAGTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLRIYKQGNMIIPSFYKLLGRM*GSKCTR Trigger: CCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAG...CTTGTAGAATGAAGGGATTATCATATTGCCCTGTTTATAAATACGGAGTAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAATATGATAATCCCTTCATTCTACAAGAAACATAACAGGGACCTGCTATCTTCAAGAAGCTGCTaGCCCACTGAGCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGNMIIPSFYKKHNRDLLSSRSC*PTELHP Trigger: AGGATGCAGCTCAGTGGGTCAGCAGCTTCTTGAAGA...TAGCAGGTCCCTGTTATGTTTCTTGTAGAATGAAGGGATTATCATATTGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTGTTCCACATCTCCAATaGGAACCTCGTTCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VVCTMSRGNRTFWNILLAVPHLQ*EPRSKN Trigger: ATTCTTGGAACGAGGTTCTCATTGGAGATGTGGAAC...AGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGAAGAGAAACTTGGAACTGGCCGATCCAAAGAACAGGCTGAAGAACTGGTTCCACATCTCCAATaGGAACCTCGTTCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKEEKLGTGRSKEQAEELVPHLQ*EPRSKN Trigger: ATTCTTGGAACGAGGTTCTCATTGGAGATGTGGAAC...CAGTTCTTCAGCCTGTTCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGAGAGATCTTCCAAGGATaGCTCAGAAAGGACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKKAREMMSWQVNSDVEGEIFQG*LRKDQE Trigger: TTCTTGGTCCTTTCTGAGGCATCCTTGGAAGATCTC...TCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGGGCTAAAGGGTCTGTCAAACTTCACACTGTCAGTAAGCAACAGCATCCACTCTGATTGTCCCTaGATTTTCCAGAGCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGLKGLSNFTLSVSNSIHSDCP*IFQSEV Trigger: TACTTCGCTCTGGAAAATCCAGGGACAATCAGAGTG...GATGCTGTTGCTTACTGACAGTGTGAAGTTTGACAGACCCTTTAGCCCAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGAAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGACACTCTGATTGTCCCTaGATTTTCCAGAGCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKKAREMMSWQVNSDVEGHSDCP*IFQSEV Trigger: TACTTCGCTCTGGAAAATCCAGGGACAATCAGAGTG...TCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTTCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTCAAACTTCACACTGTCAGTAAGCAACAGCATCCAATATCTTTAGGGCTTTTGTGTAAGCTGCACTaGGAGTCAAGGTGTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKLHTVSKQQHPISLGLLCKLH*ESRCRP Trigger: AGGACGACACCTTGACTCTCAGTGCAGCTTACACAA...AAGCCCTAAAGATATTGGATGCTGTTGCTTACTGACAGTGTGAAGTTTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR GCA 90 bp | GGATTACTCCGTATTTATAAACAGGGCAATATGATAATCCCTTCATTCTACAAGCCAGGCCATGCACTCTaGACTGGAGGAGTGGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLRIYKQGNMIIPSFYKPGHAL*TGGVGL Trigger: CAAACCCACTCCTCCAGTGCAGAGTGCATGGCCTGG...CTTGTAGAATGAAGGGATTATCATATTGCCCTGTTTATAAATACGGAGTAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR GCA 90 bp | GGATTACTCCGTATTTATAAACAGGGCAATATGATAATCCCTTCATTCTACAAGCCGGAAGCCTTCATTTaGCGAGAACTTCTGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLRIYKQGNMIIPSFYKPEAFI*RELLGR Trigger: GCGCCCCAGAAGTTCTCGGCAAATGAAGGCTTCCGG...CTTGTAGAATGAAGGGATTATCATATTGCCCTGTTTATAAATACGGAGTAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAAACTTCACACTGTCAGTAAGCAACAGCATCCAATATCTTTAGGGCTTCTTGCAGGACTTGATTaGGTAGATCCAGAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVKLHTVSKQQHPISLGLLAGLD*VDPELC Trigger: GCACAGCTCTGGATCTACCCAATCAAGTCCTGCAAG...AAGCCCTAAAGATATTGGATGCTGTTGCTTACTGACAGTGTGAAGTTTGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR TCA 90 bp | TTAATTCCCGTTGTATGCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTGCCACTTCATTATTTTaGGAAATTGGTCCGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVVCTMSRGNRTFWNIATSLF*EIGPEA Trigger: GGCTTCCGGACCAATTTCTCAAAATAATGAAGTGGC...AATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGCATACAACGGGAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
||
| 3UTR CAA 72 bp | ACGATCTTGAATCCTTTAGTGAGGCGCATCAACACTTaGCTTCAAGAGTGGAAACACCTTTTTCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TILNPLVRRINT*LQEWKHLFHRA Trigger: AGCTCTGTGAAAAAGGTGTTTCCACTCTTGAAGCAAAGTGTTGATGCGCCTCACTAAAGGATTCAAGATCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCAAACTTCACACTGTCAGTAAGCAACAGCATCCAATATCTTTAGGGCTTGAGATCTTCCAAGGATaGCTCAGAAAGGACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVKLHTVSKQQHPISLGLEIFQG*LRKDQE Trigger: TTCTTGGTCCTTTCTGAGGCATCCTTGGAAGATCTC...AAGCCCTAAAGATATTGGATGCTGTTGCTTACTGACAGTGTGAAGTTTGACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTGTCCCATTATTTTGAGAAATTaGTCCGGAAGCCTTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPGVTEHSGTFFWLTQCPIILRN*SGSLHL Trigger: CAAATGAAGGCTTCCGGACCAATTTCTCAAAATAAT...GGGACACTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCTAGGGAGATGATGTCTTGGCAAGTGAATTCCGACGTAGAAGGATTACTCAGTATTGTCCAAAGATaGGTAACTTTCCATATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAREMMSWQVNSDVEGLLSIVQR*VTFHIV Trigger: CACTATATGGAAAGTTACCCATCTTTGGACAATACT...GAGTAATCCTTCTACGTCGGAATTCACTTGCCAAGACATCATCTCCCTAGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGAAGAGAAACTTGGAACTGGCCGATCCAAAGAACAGGCTGAAGAACTGAGTATTGTCCAAAGATaGGTAACTTTCCATATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKEEKLGTGRSKEQAEELSIVQR*VTFHIV Trigger: CACTATATGGAAAGTTACCCATCTTTGGACAATACT...CAGTTCTTCAGCCTGTTCTTTGGATCGGCCAGTTCCAAGTTTCTCTTCTTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR CCA 90 bp | GGCAATATGATAATCCCTTCATTCTACAAGAAACATAACAGGGACCTGCTAAGTCACTCTGATTGTCCCTaGATTTTCCAGAGCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GNMIIPSFYKKHNRDLLSHSDCP*IFQSEV Trigger: TACTTCGCTCTGGAAAATCCAGGGACAATCAGAGTG...ACTTAGCAGGTCCCTGTTATGTTTCTTGTAGAATGAAGGGATTATCATATTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS-3UTR TCA 90 bp | GGATTACTCCGTATTTATAAACAGGGCAATATGATAATCCCTTCATTCTACAAGGTTCCACATCTCCAATaGGAACCTCGTTCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLLRIYKQGNMIIPSFYKVPHLQ*EPRSKN Trigger: ATTCTTGGAACGAGGTTCTCATTGGAGATGTGGAAC...CTTGTAGAATGAAGGGATTATCATATTGCCCTGTTTATAAATACGGAGTAATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
||
| CDS CCA 90 bp | CCAGGGCCACCGCGGCCAGTCCCAGCGCGGCGACGCCGAGCCAGGTaGACCGCGGCTGGCCCGGGACCCGAAACGCGGAGAAGCCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGPPRPVPARRRRAR*TAAGPGPETRRSRR Trigger: TCTTCGGCTTCTCCGCGTTTCGGGTCCCGGGCCAGCCGCGGTCCACCTGGCTCGGCGTCGCCGCGCTGGGACTGGCCGCGGTGGCCCTGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
||
| CDS CCA 90 bp | TCTCCACAATCCCTGCCCTGTATCTCCAGGCCATGCACTCTGCACTaGAGGAGTGGGTTTGTGGCAGGCGGGGTGATAGGCAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPQSLPCISRPCTLH*RSGFVAGGVIGSSR Trigger: CCTGCTGCTGCCTATCACCCCGCCTGCCACAAACCCACTCCTCCAGTGCAGAGTGCATGGCCTGGAGATACAGGGCAGGGATTGTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CCA 90 bp | CCTGGTCCTTGGTCCGGAACACAGCCTTCATTTGCCGAGAACTTCTaGGGCGCATGTGCGGCTCGAAGTGCACCAGGCGACAGGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPWSGTQPSFAENF*GACAARSAPGDRTA Trigger: TGCAGTCCTGTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTGTGTTCCGGACCAAGGACCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS TCA 90 bp | TGCACCAGGCGACAGGACTGCATCTTCAAGAAGCTGCTGACCCACTaGGCTGCATCCTCTCCACAATCCCTGCCCTGTATCTCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CTRRQDCIFKKLLTH*AASSPQSLPCISRP Trigger: TGGCCTGGAGATACAGGGCAGGGATTGTGGAGAGGATGCAGCTCAGTGGGTCAGCAGCTTCTTGAAGATGCAGTCCTGTCGCCTGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS GCA 90 bp | GTCCGGAACACAGCCTTCATTTGCCGAGAACTTCTGGGGCGCATGTaGGGCTCGAAGTGCACCAGGCGACAGGACTGCATCTTCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRNTAFICRELLGRM*GSKCTRRQDCIFKK Trigger: CTTCTTGAAGATGCAGTCCTGTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTGTGTTCCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS TCA 90 bp | GCTCGAAGTGCACCAGGCGACAGGACTGCATCTTCAAGAAGCTGCTaGCCCACTGAGCTGCATCCTCTCCACAATCCCTGCCCTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: ARSAPGDRTASSRSC*PTELHPLHNPCPVS Trigger: AGATACAGGGCAGGGATTGTGGAGAGGATGCAGCTCAGTGGGTCAGCAGCTTCTTGAAGATGCAGTCCTGTCGCCTGGTGCACTTCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS GCA 90 bp | ATTGGTCCGGAAGCCTTCATTTGCCGAGAACTTCTGGGGCGCATGTaGGGCTCGAAGTGCACCAGGCGACAGGACTGCATCTTCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGPEAFICRELLGRM*GSKCTRRQDCIFKK Trigger: CTTCTTGAAGATGCAGTCCTGTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTTCCGGACCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS-3UTR CAA 90 bp | CCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTGTCCCCACATGCTAGGGGACCAAGAATGGACTaGCATCTGAGTAGGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PRRRYLPLWCHYLSPHARGPRMD*HLSRPL Trigger: AAGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCC...CCTAGCATGTGGGGACAGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS GCA 90 bp | GGCGGTAGCTCTTCAGTGTTTCCAGAGGCTCCTTCCTGTCCGAGATaGCAGTGTCTGGATCCACTGTTGTTAAAAGGCACCGGGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGSSSVFPEAPSCPR*QCLDPLLLKGTGYK Trigger: CTTGTACCCGGTGCCTTTTAACAACAGTGGATCCAGACACTGGCATCTCGGACAGGAAGGAGCCTCTGGAAACACTGAAGAGCTACCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CCA 90 bp | TATTTTGAGAAATTGGTCCGGAAGCCTTCATTTGCCGAGAACTTCTaGGGCGCATGTGCGGCTCGAAGTGCACCAGGCGACAGGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YFEKLVRKPSFAENF*GACAARSAPGDRTA Trigger: TGCAGTCCTGTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTTCCGGACCAATTTCTCAAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS TCA 90 bp | ATCTTCCAAGGATGCCTCAGAAAGGACCAAGAATGGACTTGCATCTaGGTAGGCCACCTGGTCCTTGGTCCGGAACACAGCCTTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFQGCLRKDQEWTCI*VGHLVLGPEHSLHL Trigger: CAAATGAAGGCTGTGTTCCGGACCAAGGACCAGGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCCTTTCTGAGGCATCCTTGGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS-3UTR CAA 90 bp | AATCTCATCTTAGACACCCAGGCGGAGGTATCTCCCTCTCTGGTGTCACTATCTATGTTCCCCTCTTCATaGATCACGAGCCAAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLILDTQAEVSPSLVSLSMFPSS*ITSQNL Trigger: CAGGTTTTGGCTCGTGATCAATGAAGAGGGGAACAT...AGATAGTGACACCAGAGAGGGAGATACCTCCGCCTGGGTGTCTAAGATGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR CAA 90 bp | GTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGTGTCCCTCCCTTTTTGGACCAAGAATGGACTaGCATCTGAGTAGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VTEHSGTFFWLTQCPSLFGPRMD*HLSRPP Trigger: AGGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCC...AAAAAGGGAGGGACACTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS-3UTR CAA 90 bp | AAGAAACATAACAGGGACCTGCTAAGTTCGCAAAGCTGTATTTGCCTGCTTTGTGGACCAAGAATGGACTaGCATCTGAGTAGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KKHNRDLLSSQSCICLLCGPRMD*HLSRPP Trigger: AGGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCC...ACAAAGCAGGCAAATACAGCTTTGCGAACTTAGCAGGTCCCTGTTATGTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS TCA 90 bp | ATCTTCCAAGGATGCCTCAGAAAGGACCAAGAATGGACTTGCATCTaGGTAGGCCACTTCATTATTTTGAGAAATTGGTCCGGAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IFQGCLRKDQEWTCI*VGHFIILRNWSGSL Trigger: AAGGCTTCCGGACCAATTTCTCAAAATAATGAAGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCCTTTCTGAGGCATCCTTGGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS-3UTR CAA 90 bp | AAGAAACATAACAGGGACCTGCTAAGTTCGCAAAGCTGTATTTGCCTGCTTTGTATGTTCCCCTCTTCATaGATCACGAGCCAAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: KKHNRDLLSSQSCICLLCMFPSS*ITSQNL Trigger: CAGGTTTTGGCTCGTGATCAATGAAGAGGGGAACAT...ACAAAGCAGGCAAATACAGCTTTGCGAACTTAGCAGGTCCCTGTTATGTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS-3UTR CAA 90 bp | GCACCATGTCCAGGGGTAACAGAACATTCTGGAACATTCTTCTGGCTTACACAGCATTATTTTGAGAAATaGGTCCGGAAGCCTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: APCPGVTEHSGTFFWLTQHYFEK*VRKPSF Trigger: AAATGAAGGCTTCCGGACCAATTTCTCAAAATAATG...CTGTGTAAGCCAGAAGAATGTTCCAGAATGTTCTGTTACCCCTGGACATGGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS-3UTR CAA 90 bp | GGATTACTCCGTATTTATAAACAGGGCAATATGATAATCCCTTCATTCTACAAGGGCCACTTCATTATTTaGAGAAATTGGTCCGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLLRIYKQGNMIIPSFYKGHFII*RNWSGS Trigger: GCTTCCGGACCAATTTCTCAAAATAATGAAGTGGCC...CTTGTAGAATGAAGGGATTATCATATTGCCCTGTTTATAAATACGGAGTAATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS CCA 72 bp | CCGCGGCCAGTCCCAGCGCGGCGACGCCGAGCCAGGTaGACCGCGGCTGGCCCGGGACCCGAAACGCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRPVPARRRRAR*TAAGPGPETRR Trigger: TCTCCGCGTTTCGGGTCCCGGGCCAGCCGCGGTCCACCTGGCTCGGCGTCGCCGCGCTGGGACTGGCCGCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 |
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| CDS GCA 72 bp | GCCACCTGGTCCTTGGTCCGGAACACAGCCTTCATTTaGCGAGAACTTCTGGGGCGCATGTGCGGCTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ATWSLVRNTAFI*RELLGRMCGSK Trigger: CTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTGTGTTCCGGACCAAGGACCAGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS CCA 72 bp | CTGTATCTCCAGGCCATGCACTCTGCACTGGAGGAGTaGGTTTGTGGCAGGCGGGGTGATAGGCAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LYLQAMHSALEE*VCGRRGDRQQQ Trigger: CTGCTGCTGCCTATCACCCCGCCTGCCACAAACCCACTCCTCCAGTGCAGAGTGCATGGCCTGGAGATACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CCA 72 bp | TGGTCCGGAACACAGCCTTCATTTGCCGAGAACTTCTaGGGCGCATGTGCGGCTCGAAGTGCACCAGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: WSGTQPSFAENF*GACAARSAPGD Trigger: GTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTGTGTTCCGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS CAA 72 bp | GGCCACCTGGTCCTTGGTCCGGAACACAGCCTTCATTaGCCGAGAACTTCTGGGGCGCATGTGCGGCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GHLVLGPEHSLH*PRTSGAHVRLE Trigger: TTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTGTGTTCCGGACCAAGGACCAGGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS GCA 72 bp | ACAGCCTTCATTTGCCGAGAACTTCTGGGGCGCATGTaGGGCTCGAAGTGCACCAGGCGACAGGACTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TAFICRELLGRM*GSKCTRRQDCI Trigger: GATGCAGTCCTGTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS GCA 72 bp | GAAGCCTTCATTTGCCGAGAACTTCTGGGGCGCATGTaGGGCTCGAAGTGCACCAGGCGACAGGACTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: EAFICRELLGRM*GSKCTRRQDCI Trigger: GATGCAGTCCTGTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS TCA 72 bp | GCACCAGGCGACAGGACTGCATCTTCAAGAAGCTGCTaGCCCACTGAGCTGCATCCTCTCCACAATCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: APGDRTASSRSC*PTELHPLHNPC Trigger: GCAGGGATTGTGGAGAGGATGCAGCTCAGTGGGTCAGCAGCTTCTTGAAGATGCAGTCCTGTCGCCTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CCA 72 bp | AAATTGGTCCGGAAGCCTTCATTTGCCGAGAACTTCTaGGGCGCATGTGCGGCTCGAAGTGCACCAGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: KLVRKPSFAENF*GACAARSAPGD Trigger: GTCGCCTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTTCCGGACCAATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS TCA 72 bp | CGACAGGACTGCATCTTCAAGAAGCTGCTGACCCACTaGGCTGCATCCTCTCCACAATCCCTGCCCTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: RQDCIFKKLLTH*AASSPQSLPCI Trigger: GATACAGGGCAGGGATTGTGGAGAGGATGCAGCTCAGTGGGTCAGCAGCTTCTTGAAGATGCAGTCCTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS TCA 72 bp | GGATGCCTCAGAAAGGACCAAGAATGGACTTGCATCTaGGTAGGCCACCTGGTCCTTGGTCCGGAACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCLRKDQEWTCI*VGHLVLGPEHS Trigger: GCTGTGTTCCGGACCAAGGACCAGGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCCTTTCTGAGGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS CAA 72 bp | CTTCCAAGGATGCCTCAGAAAGGACCAAGAATGGACTaGCATCTGAGTAGGCCACCTGGTCCTTGGTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPRMPQKGPRMD*HLSRPPGPWSG Trigger: TCCGGACCAAGGACCAGGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCCTTTCTGAGGCATCCTTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS CAA 72 bp | CCTTCCTGTCCGAGATGCCAGTGTCTGGATCCACTGTaGTTAAAAGGCACCGGGTACAAGCCATCACCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PSCPRCQCLDPL*LKGTGYKPSPV Trigger: AACGGGTGATGGCTTGTACCCGGTGCCTTTTAACAACAGTGGATCCAGACACTGGCATCTCGGACAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CCA 72 bp | AGAATGGACTTGCATCTGAGTAGGCCACCTGGTCCTTaGTCCGGAACACAGCCTTCATTTGCCGAGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: RMDLHLSRPPGP*SGTQPSFAENF Trigger: GAAGTTCTCGGCAAATGAAGGCTGTGTTCCGGACCAAGGACCAGGTGGCCTACTCAGATGCAAGTCCATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048462.13 ENSMUST00000189492.2 |
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| CDS CAA 90 bp | GTAGGCCACTTCATTATTTTGAGAAATTGGTCCGGAAGCCTTCATTaGCCGAGAACTTCTGGGGCGCATGTGCGGCTCGAAGTGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGHFIILRNWSGSLH*PRTSGAHVRLEVHQ Trigger: CTGGTGCACTTCGAGCCGCACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTTCCGGACCAATTTCTCAAAATAATGAAGTGGCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS CCA 72 bp | CAGGAGGTACACAGGGTCTCCCACTCTGATTGTCCCTaGATTTTCCAGAGCGAAGTATTGTCCAAAGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: QEVHRVSHSDCP*IFQSEVLSKDG Trigger: CCCATCTTTGGACAATACTTCGCTCTGGAAAATCCAGGGACAATCAGAGTGGGAGACCCTGTGTACCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CAA 72 bp | AAGTTTGTCGCTTTCACTCTGCGCTCCAGCCTGGAGTaGAGATCTTCCAAGGATGCCTCAGAAAGGACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KFVAFTLRSSLE*RSSKDASERTK Trigger: CTTGGTCCTTTCTGAGGCATCCTTGGAAGATCTCAACTCCAGGCTGGAGCGCAGAGTGAAAGCGACAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CAA 90 bp | TTAGGCCTGAAGTTTGTCGCTTTCACTCTGCGCTCCAGCCTGGAGTaGAGATCTTCCAAGGATGCCTCAGAAAGGACCAAGAATGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLKFVAFTLRSSLE*RSSKDASERTKNGL Trigger: AAGTCCATTCTTGGTCCTTTCTGAGGCATCCTTGGAAGATCTCAACTCCAGGCTGGAGCGCAGAGTGAAAGCGACAAACTTCAGGCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS CAA 90 bp | AGAATGGACTTGCATCTGAGTAGGCCACTTCATTATTTTGAGAAATaGGTCCGGAAGCCTTCATTTGCCGAGAACTTCTGGGGCGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RMDLHLSRPLHYFEK*VRKPSFAENFWGAC Trigger: ACATGCGCCCCAGAAGTTCTCGGCAAATGAAGGCTTCCGGACCAATTTCTCAAAATAATGAAGTGGCCTACTCAGATGCAAGTCCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS CCA 72 bp | TCCCTGGATTTTCCAGAGCGAAGTATTGTCCAAAGATaGGTAACTTTCCATATAGTGCTTGCTCGGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLDFPERSIVQR*VTFHIVLARKG Trigger: ACCCTTCCGAGCAAGCACTATATGGAAAGTTACCCATCTTTGGACAATACTTCGCTCTGGAAAATCCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048462.13 ENSMUST00000110992.9 ENSMUST00000189492.2 |
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| CDS TCA 72 bp | GGATGCCTCAGAAAGGACCAAGAATGGACTTGCATCTaGGTAGGCCACTTCATTATTTTGAGAAATTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GCLRKDQEWTCI*VGHFIILRNWS Trigger: GGACCAATTTCTCAAAATAATGAAGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCCTTTCTGAGGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS CAA 72 bp | TTGCATCTGAGTAGGCCACTTCATTATTTTGAGAAATaGGTCCGGAAGCCTTCATTTGCCGAGAACTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LHLSRPLHYFEK*VRKPSFAENFW Trigger: CCAGAAGTTCTCGGCAAATGAAGGCTTCCGGACCAATTTCTCAAAATAATGAAGTGGCCTACTCAGATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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| CDS CAA 72 bp | CTTCCAAGGATGCCTCAGAAAGGACCAAGAATGGACTaGCATCTGAGTAGGCCACTTCATTATTTTGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPRMPQKGPRMD*HLSRPLHYFEK Trigger: TTTCTCAAAATAATGAAGTGGCCTACTCAGATGCAAGTCCATTCTTGGTCCTTTCTGAGGCATCCTTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110992.9 |
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