Pregenerated sensors for MTAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062937Ensembl transcript IDs: ENSMUST00000058030.10
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGTCTGCTTTCCTTCTGGGTCCCGGAGGAGTTGGGATCTTGGTTaGGTCGCTAACAGTGTCTTTCTTTCTAGGCAAAGGCATGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: AVCFPSGSRRSWDLG*VANSVFLSRQRHEG Trigger: GCCTTCATGCCTTTGCCTAGAAAGAAAGACACTGTTAGCGACTCAACCAAGATCCCAACTCCTCCGGGACCCAGAAGGAAAGCAGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 90 bp | GGTTTAGTAAGCTCCTCACACAGCATTTTCCTTTATTTCTTTATTTaGGAAAGGGGGTTATTTGGCTTATATATCTTGATTCACATACAC | + |
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Preference number: 1 (lower is better) Translates to: GLVSSSHSIFLYFFI*ERGLFGLYILIHIH Trigger: GTGTATGTGAATCAAGATATATAAGCCAAATAACCCCCTTTCCCAAATAAAGAAATAAAGGAAAATGCTGTGTGAGGAGCTTACTAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCAGAGATGGGAGCACTGCAACATGGGCGGAAGTAACAATTGCACTTATCCTCTCCGGCTCTGTTTaGCAGGCTGTCTGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TARDGSTATWAEVTIALILSGSV*QAVCFP Trigger: AGGAAAGCAGACAGCCTGCCAAACAGAGCCGGAGAG...GATAAGTGCAATTGTTACTTCCGCCCATGTTGCAGTGCTCCCATCTCTGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR GCA 90 bp | GTCACACTGGCTTGCATTAAACACCGGCCTTGGCTTTCTCAGTTACATCATCTTGTTTGGCAGGCTGTCTaGTTTCCTTCTGGGTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: VTLACIKHRPWLSQLHHLVWQAV*FPSGSR Trigger: CCGGGACCCAGAAGGAAAGCAGACAGCCTGCCAAAC...AAGATGATGTAACTGAGAAAGCCAAGGCCGGTGTTTAATGCAAGCCAGTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTCCACGGACTGCTTACAGCCAGAGATGGGAGCACTGCAACATGGGCGGAAACATGATTTCCACTTaGTTGCTCCATAACCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: ESPRTAYSQRWEHCNMGGNMIST*LLHNLS Trigger: ACTTAGGTTATGGAGCAATCAAGTGGAAATCATGTT...TCCGCCCATGTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCCGTGGAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCCAGACCCAGTGATTATATGCATGTTTCATCATGATGAAGGATTAAGGGGAAAGGGGGTTATTTaGCTTATATATCTTGATTCA | + |
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Preference number: 2 (lower is better) Translates to: VEPDPVIICMFHHDEGLRGKGVI*LIYLDS Trigger: TGAATCAAGATATATAAGCCAAATAACCCCCTTTCC...CCTTAATCCTTCATCATGATGAAACATGCATATAATCACTGGGTCTGGCTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CAA 90 bp | TTTGGCTTATATATCTTGATTCACATACACAGCGCAGTTATATTATaGTTGTTGTCTTCACTTCACCACCAAAGGAGTTTCAAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FGLYILIHIHSAVIL*LLSSLHHQRSFKVL Trigger: GAGAACTTTGAAACTCCTTTGGTGGTGAAGTGAAGACAACAACAATAATATAACTGCGCTGTGTATGTGAATCAAGATATATAAGCCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR GCA 72 bp | AAAGCCCTGATCAGGCCTCACGGAGTCTCCACGGACTaGTTACAGCCAGAGATGGGAGCACTGCAACATGGG | + |
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Preference number: 3 (lower is better) Translates to: KALIRPHGVSTD*LQPEMGALQHG Trigger: CCCATGTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCCGTGGAGACTCCGTGAGGCCTGATCAGGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 72 bp | AGGGAAAGTGAGACAGATGTGCTCTCCGGCTCTGTTTaGCAGGCTGTCTGCTTTCCTTCTGGGTCCCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RESETDVLSGSV*QAVCFPSGSRR Trigger: CCTCCGGGACCCAGAAGGAAAGCAGACAGCCTGCCAAACAGAGCCGGAGAGCACATCTGTCTCACTTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR GCA 72 bp | ACAGATGTGCTCTCCGGCTCTGTTTGGCAGGCTGTCTaGTTTCCTTCTGGGTCCCGGAGGAGTTGGGATCTT | + |
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Preference number: 3 (lower is better) Translates to: TDVLSGSVWQAV*FPSGSRRSWDL Trigger: AAGATCCCAACTCCTCCGGGACCCAGAAGGAAAGCAGACAGCCTGCCAAACAGAGCCGGAGAGCACATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 72 bp | CTCACGGAGTCTCCACGGACTGCTTACAGCCAGAGATaGGAGCACTGCAACATGGGCGGAAGTAACAATTGC | + |
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Preference number: 3 (lower is better) Translates to: LTESPRTAYSQR*EHCNMGGSNNC Trigger: GCAATTGTTACTTCCGCCCATGTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCCGTGGAGACTCCGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 72 bp | GGACTGCTTACAGCCAGAGATGGGAGCACTGCAACATaGGCGGAAGTAACAATTGCACTTATCCAGGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: GLLTARDGSTAT*AEVTIALIQGL Trigger: GAGGCCCTGGATAAGTGCAATTGTTACTTCCGCCCATGTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR CAA 90 bp | CAGAAAAAGAATGGAATTACGATACCCGTAGGAAGATGGACAGAACGGACAGCAGCTCTCCGGCTCTGTTaGGCAGGCTGTCTGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QKKNGITIPVGRWTERTAALRLC*AGCLLS Trigger: GGAAAGCAGACAGCCTGCCAAACAGAGCCGGAGAGC...TGCTGTCCGTTCTGTCCATCTTCCTACGGGTATCGTAATTCCATTCTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR TCA 72 bp | GTTGACACTGCAGTGAGTAAAAACAACCTAAAGCCCTaGTCAGGCCTCACGGAGTCTCCACGGACTGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: VDTAVSKNNLKP*SGLTESPRTAY Trigger: GTAAGCAGTCCGTGGAGACTCCGTGAGGCCTGATCAGGGCTTTAGGTTGTTTTTACTCACTGCAGTGTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR GCA 72 bp | TCTCCACGGACTGCTTACAGCCAGAGATGGGAGCACTaGAACATGGGCGGAAGTAACAATTGCACTTATCCA | + |
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Preference number: 3 (lower is better) Translates to: SPRTAYSQRWEH*NMGGSNNCTYP Trigger: TGGATAAGTGCAATTGTTACTTCCGCCCATGTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCCGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR TCA 72 bp | TTTCCTTCTGGGTCCCGGAGGAGTTGGGATCTTGGTTaGGTCGCTAACAGTGTCTTTCTTTCTAGGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: FPSGSRRSWDLG*VANSVFLSRQR Trigger: CCTTTGCCTAGAAAGAAAGACACTGTTAGCGACTCAACCAAGATCCCAACTCCTCCGGGACCCAGAAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR GCA 72 bp | CTTGTTGTCAGTTTAATAGGGAAAGTGAGACAGATGTaGTCTCCGGCTCTGTTTGGCAGGCTGTCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: LVVSLIGKVRQM*SPALFGRLSAF Trigger: GAAAGCAGACAGCCTGCCAAACAGAGCCGGAGAGCACATCTGTCTCACTTTCCCTATTAAACTGACAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR GCA 72 bp | TACATTATGGGAGCAGCCCACACGTCCATCAACACATaGATGGATAAGGATGCGGAAAGGATACACAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: YIMGAAHTSINT*MDKDAERIHKE Trigger: CTCCTTGTGTATCCTTTCCGCATCCTTATCCATGCATGTGTTGATGGACGTGTGGGCTGCTCCCATAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 72 bp | ATGTGTCAACTCTCGATACACTGTGATGAGTCACACTaGCTTGCATTAAACACCGGCCTTGGCTTTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: MCQLSIHCDESH*LALNTGLGFLS Trigger: ACTGAGAAAGCCAAGGCCGGTGTTTAATGCAAGCCAGTGTGACTCATCACAGTGTATCGAGAGTTGACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 72 bp | TTATGGGAGCAGCCCACACGTCCATCAACACATGCATaGATAAGGATGCGGAAAGGATACACAAGGAGATTT | + |
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Preference number: 3 (lower is better) Translates to: LWEQPTRPSTHA*IRMRKGYTRRF Trigger: AAATCTCCTTGTGTATCCTTTCCGCATCCTTATCCATGCATGTGTTGATGGACGTGTGGGCTGCTCCCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 72 bp | CAAGAGAAACTCTTAGAATACCAAGTGTCGGAAACATaGCGCCAGTTTACAATCACACAGTCCCATCTCGAG | + |
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Preference number: 3 (lower is better) Translates to: QEKLLEYQVSET*RQFTITQSHLE Trigger: CTCGAGATGGGACTGTGTGATTGTAAACTGGCGCCATGTTTCCGACACTTGGTATTCTAAGAGTTTCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR CAA 90 bp | AGGGGAAGAAGCCTGCACATGATGCTAGAAAGGCCACTGAAGAAAGTCATTCTCAGCGCAGTTATATTATaGTTGTTGTCTTCACTTCAC | + |
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Preference number: 3 (lower is better) Translates to: RGRSLHMMLERPLKKVILSAVIL*LLSSLH Trigger: GTGAAGTGAAGACAACAACAATAATATAACTGCGCT...GAGAATGACTTTCTTCAGTGGCCTTTCTAGCATCATGTGCAGGCTTCTTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR CAA 90 bp | AGGGGAAGAAGCCTGCACATGATGCTAGAAAGGCCACTGAAGAAAGTCATTCTCCCTTTATTTCTTTATTaGGGAAAGGGGGTTATTTGG | + |
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Preference number: 3 (lower is better) Translates to: RGRSLHMMLERPLKKVILPLFLY*GKGVIW Trigger: CCAAATAACCCCCTTTCCCAAATAAAGAAATAAAGG...GAGAATGACTTTCTTCAGTGGCCTTTCTAGCATCATGTGCAGGCTTCTTCCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR GCA 72 bp | GGACAGCATCATGTTGAGCCAGACCCAGTGATTATATaGATGTTTCATCATGATGAAGGATTAAGGAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GQHHVEPDPVII*MFHHDEGLRKR Trigger: CCTTTTCCTTAATCCTTCATCATGATGAAACATGCATATAATCACTGGGTCTGGCTCAACATGATGCTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR-3UTR CAA 90 bp | TCTTGTCAGAAAAAGAATGGAATTACGATACCCGTAGGAAGATGGACAGAACGGGCAGTTATATTATTGTaGTTGTCTTCACTTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: SCQKKNGITIPVGRWTERAVILL*LSSLHH Trigger: GTGGTGAAGTGAAGACAACAACAATAATATAACTGC...CCGTTCTGTCCATCTTCCTACGGGTATCGTAATTCCATTCTTTTTCTGACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CCA 72 bp | GATACACAAGGAGATTTCATCTTGTCAGAAAAAGAATaGAATTACGATACCCGTAGGAAGATGGACAGAACG | + |
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Preference number: 3 (lower is better) Translates to: DTQGDFILSEKE*NYDTRRKMDRT Trigger: CGTTCTGTCCATCTTCCTACGGGTATCGTAATTCCATTCTTTTTCTGACAAGATGAAATCTCCTTGTGTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR GCA 90 bp | GGCCTCACGGAGTCTCCACGGACTGCTTACAGCCAGAGATGGGAGCACTGCAACCAATCTTCACCGCCGTaGAGGCGGAGCCCGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLTESPRTAYSQRWEHCNQSSPP*RRSPRP Trigger: TGGCCTCGGGCTCCGCCTGCACGGCGGTGAAGATTG...GTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCCGTGGAGACTCCGTGAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR TCA 90 bp | AAACAACCTAAAGCCCTGATCAGGCCTCACGGAGTCTCCACGGACTGCTTACAGTTTCTGCCCGGGAGCTaGAACGGGGCCCCTCAATTG | + |
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Preference number: 4 (lower is better) Translates to: KQPKALIRPHGVSTDCLQFLPGS*NGAPQL Trigger: CAATTGAGGGGCCCCGTTTCAGCTCCCGGGCAGAAA...CTGTAAGCAGTCCGTGGAGACTCCGTGAGGCCTGATCAGGGCTTTAGGTTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR TCA 90 bp | GAGTCTCCACGGACTGCTTACAGCCAGAGATGGGAGCACTGCAACATGGGCGGAGAACAGTGGTCATGTTaGCAACATCTGCGCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ESPRTAYSQRWEHCNMGGEQWSC*QHLRPK Trigger: CTTGGGGCGCAGATGTTGTCAACATGACCACTGTTC...TCCGCCCATGTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCCGTGGAGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTTTGGCAGGCTGTCTGCTTTCCTTCTGGGTCCCGGAGGAGTTGGGATCTACCATGTCACCAGGCTaGATCTCCTCTCTCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LCLAGCLLSFWVPEELGSTMSPG*ISSLKD Trigger: GTCCTTGAGAGAGGAGATCCAGCCTGGTGACATGGT...AGATCCCAACTCCTCCGGGACCCAGAAGGAAAGCAGACAGCCTGCCAAACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CCA 90 bp | ACAGCCAGAGATGGGAGCACTGCAACATGGGCGGAAGTAACAATTGCACTTATCTCAGCCATGGGGATGTaGCACACTCCTCTGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: TARDGSTATWAEVTIALISAMGM*HTPLAL Trigger: CAGTGCCAGAGGAGTGTGCCACATCCCCATGGCTGA...GATAAGTGCAATTGTTACTTCCGCCCATGTTGCAGTGCTCCCATCTCTGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CCA 90 bp | CAGAAAAAGAATGGAATTACGATACCCGTAGGAAGATGGACAGAACGGACAGCAAAAACGGTTCAGCCATaGGGATGTGGCACACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QKKNGITIPVGRWTERTAKTVQP*GCGTLL Trigger: GAGGAGTGTGCCACATCCCCATGGCTGAACCGTTTT...TGCTGTCCGTTCTGTCCATCTTCCTACGGGTATCGTAATTCCATTCTTTTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CCA 90 bp | ATGTGTCAACTCTCGATACACTGTGATGAGTCACACTGGCTTGCATTAAACACCGGACCTCTCTTGTTTTaGGGCAAAACGGTTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: MCQLSIHCDESHWLALNTGPLLF*GKTVQP Trigger: TGGCTGAACCGTTTTGCCCCAAAACAAGAGAGGTCC...GGTGTTTAATGCAAGCCAGTGTGACTCATCACAGTGTATCGAGAGTTGACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR GCA 90 bp | TCTTGTCAGAAAAAGAATGGAATTACGATACCCGTAGGAAGATGGACAGAACGGAGGCATCGGATGGCTTaGCGAATGGAGTATCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SCQKKNGITIPVGRWTERRHRMA*RMEYPH Trigger: ATGTGGATACTCCATTCGGCAAGCCATCCGATGCCT...CCGTTCTGTCCATCTTCCTACGGGTATCGTAATTCCATTCTTTTTCTGACAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCGCTCGACATTAACACTGGAGCAAATAATTCATTTATTGCTTACAATGAATATAAGGCTTTCTaGCCGGGAGCTGAAACGGGG | + |
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Preference number: 4 (lower is better) Translates to: RASLDINTGANNSFIAYNEYKAF*PGAETG Trigger: CCCCGTTTCAGCTCCCGGGCAGAAAGCCTTATATTC...ATTGTAAGCAATAAATGAATTATTTGCTCCAGTGTTAATGTCGAGCGAGGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR TCA 90 bp | TCTTGTCAGAAAAAGAATGGAATTACGATACCCGTAGGAAGATGGACAGAACGGCTGGTAGTTGACTTTTaGAGGCATGATGGTGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SCQKKNGITIPVGRWTERLVVDF*RHDGVL Trigger: CAACACACCATCATGCCTTCAAAAGTCAACTACCAG...CCGTTCTGTCCATCTTCCTACGGGTATCGTAATTCCATTCTTTTTCTGACAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR GCA 90 bp | CACAAGGAGATTTCATCTTGTCAGAAAAAGAATGGAATTACGATACCCGTAGGAACACTCCTCTGGCACTaGAATGACTCCCATCATAGA | + |
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Preference number: 4 (lower is better) Translates to: HKEISSCQKKNGITIPVGTLLWH*NDSHHR Trigger: TCTATGATGGGAGTCATTGCAGTGCCAGAGGAGTGT...TCCTACGGGTATCGTAATTCCATTCTTTTTCTGACAAGATGAAATCTCCTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCGCTCGACATTAACACTGGAGCAAATAATTCATTTATTGCTTACAATTTGTCTGCCGTGTCTTaGAAGAAGTACACAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: RASLDINTGANNSFIAYNLSAVS*KKYTIN Trigger: GTTGATTGTGTACTTCTTGCAAGACACGGCAGACAA...ATTGTAAGCAATAAATGAATTATTTGCTCCAGTGTTAATGTCGAGCGAGGCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CCA 90 bp | AGGGCCTCGCTCGACATTAACACTGGAGCAAATAATTCATTTATTGCTTACAATGTCCTGTCAATGAATTaGTCAATGATGACCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: RASLDINTGANNSFIAYNVLSMN*SMMTMS Trigger: TGACATGGTCATCATTGACCAATTCATTGACAGGAC...ATTGTAAGCAATAAATGAATTATTTGCTCCAGTGTTAATGTCGAGCGAGGCCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| 3UTR CAA 72 bp | TATATCTTGATTCACATACACAGCGCAGTTATATTATaGTTGTTGTCTTCACTTCACCACCAAAGGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: YILIHIHSAVIL*LLSSLHHQRSF Trigger: GAAACTCCTTTGGTGGTGAAGTGAAGACAACAACAATAATATAACTGCGCTGTGTATGTGAATCAAGATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CAA 90 bp | CTCTGTTTGGCAGGCTGTCTGCTTTCCTTCTGGGTCCCGGAGGAGTTGGGATCTAAGGCATCGGATGGCTaGCCGAATGGAGTATCCACA | + |
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Preference number: 5 (lower is better) Translates to: LCLAGCLLSFWVPEELGSKASDG*PNGVST Trigger: TGTGGATACTCCATTCGGCAAGCCATCCGATGCCTT...AGATCCCAACTCCTCCGGGACCCAGAAGGAAAGCAGACAGCCTGCCAAACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CAA 90 bp | AGGGGAAGAAGCCTGCACATGATGCTAGAAAGGCCACTGAAGAAAGTCATTCTCAGGACCTCTCTTGTTTaGGGGCAAAACGGTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RGRSLHMMLERPLKKVILRTSLV*GQNGSA Trigger: GGCTGAACCGTTTTGCCCCAAAACAAGAGAGGTCCT...GAGAATGACTTTCTTCAGTGGCCTTTCTAGCATCATGTGCAGGCTTCTTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CAA 90 bp | TGGCTTGCATTAAACACCGGCCTTGGCTTTCTCAGTTACATCATCTTAGCTGTGAACAATCATAGTCGGTaGCCATGGCAATGCTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: WLALNTGLGFLSYIILAVNNHSR*PWQCLH Trigger: ATGCAAGCATTGCCATGGCAACCGACTATGATTGTT...CACAGCTAAGATGATGTAACTGAGAAAGCCAAGGCCGGTGTTTAATGCAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CAA 90 bp | ATTTGGGAAAGGGGGTTATTTGGCTTATATATCTTGATTCACATACACAGCGCAGTTGTCTGCCGTGTCTaGCAAGAAGTACACAATCAA | + |
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Preference number: 5 (lower is better) Translates to: IWERGLFGLYILIHIHSAVVCRV*QEVHNQ Trigger: TTGATTGTGTACTTCTTGCAAGACACGGCAGACAAC...TGCGCTGTGTATGTGAATCAAGATATATAAGCCAAATAACCCCCTTTCCCAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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| CDS-3UTR CAA 90 bp | ACAGCGCAGTTATATTATTGTTGTTGTCTTCACTTCACCACCAAAGGAGTTTCAGTGAGGAGTAAACTTTaGGCTTTATTGGCATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TAQLYYCCCLHFTTKGVSVRSKL*ALLAFS Trigger: AGAAAATGCCAATAAAGCCAAAAGTTTACTCCTCAC...TGAAACTCCTTTGGTGGTGAAGTGAAGACAACAACAATAATATAACTGCGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058030.10 |
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