Pregenerated sensors for MTA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055817Ensembl transcript IDs: ENSMUST00000067826.15, ENSMUST00000112349.9, ENSMUST00000112350.8, ENSMUST00000112352.10, ENSMUST00000176816.8, ENSMUST00000177069.8
Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGACCGGCATGCCCTGCAAGGCCTGCCGGGACATGTGGCTTCTTaGGCGCGGGTCCTCTGCAGTCGGGCTGGGAGACTTCTCTTCGTC | + |
|
Preference number: 1 (lower is better) Translates to: PDRHALQGLPGHVAS*ARVLCSRAGRLLFV Trigger: GACGAAGAGAAGTCTCCCAGCCCGACTGCAGAGGACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGCCGGTCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 90 bp | GGGTCTTCACTGCAGACTTGGGGCTTCCGGTGTTCCGGACCGGCATaGCCTGCAAGGCCTGCCGGGACATGTGGCTTCTTGCGCGCGGGT | + |
|
Preference number: 1 (lower is better) Translates to: GSSLQTWGFRCSGPA*PARPAGTCGFLRAG Trigger: ACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 90 bp | TTCACTGCAGACTTGGGGCTTCCGGTGTTCCGGACCGGCATGCCCTaGAAGGCCTGCCGGGACATGTGGCTTCTTGCGCGCGGGTCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: FTADLGLPVFRTGMP*KACRDMWLLARGSS Trigger: AGAGGACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | CTCCGAACTAGGCTCTTGCCGCATGTGGCAGTGGGGAGCTGGTGCTaGGCAAGGTCTCACTGGCCCACAGCAGCCTTACCCTTCATGCCC | + |
|
Preference number: 1 (lower is better) Translates to: LRTRLLPHVAVGSWC*ARSHWPTAALPFMP Trigger: GGGCATGAAGGGTAAGGCTGCTGTGGGCCAGTGAGACCTTGCTCAGCACCAGCTCCCCACTGCCACATGCGGCAAGAGCCTAGTTCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR TCA 90 bp | CAGCAGGGCCACGCTGCACTTCCCCCTGATATGTGTCGCAGGCAGTaGCTCGTACTGGCGCGACAGAAAGAGCTCCCTGTGTTTCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: QQGHAALPPDMCRRQ*LVLARQKELPVFQL Trigger: CAGCTGAAACACAGGGAGCTCTTTCTGTCGCGCCAGTACGAGTCACTGCCTGCGACACATATCAGGGGGAAGTGCAGCGTGGCCCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | GGAGGTCAGAGGGCACTTGAAGGAGTCGGTTCTCTCCTTTCACCATaGGGGTCCCAGGGATCAAACTCAGGTCACCGGCTTGGTGGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: GGQRALEGVGSLLSP*GSQGSNSGHRLGGS Trigger: GCTGCCACCAAGCCGGTGACCTGAGTTTGATCCCTGGGACCCTCATGGTGAAAGGAGAGAACCGACTCCTTCAAGTGCCCTCTGACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| 3UTR TCA 90 bp | CAACCGCTTGTCACAGTGATGCACCCACTTGGCACGATCAACTCCTaGTCTCTGGGGAGCGCTACAGGACTGCGGGCAAACCAACCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: QPLVTVMHPLGTINS*SLGSATGLRANQPH Trigger: GTGGGGTTGGTTTGCCCGCAGTCCTGTAGCGCTCCCCAGAGATCAGGAGTTGATCGTGCCAAGTGGGTGCATCACTGTGACAAGCGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 90 bp | TACTGGCGCGACAGAAAGAGCTCCCTGTGTTTCAGCTGGTGCTTCTaGTTCTCCGTCAAGTCGGCCTCAACTGGCGTCTCCGACTCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: YWRDRKSSLCFSWCF*FSVKSASTGVSDSS Trigger: GGAGGAGTCGGAGACGCCAGTTGAGGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGAGCTCTTTCTGTCGCGCCAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | CTGGCTAAATACAGATTCCCCTCCGAACTAGGCTCTTGCCGCATGTaGCAGTGGGGAGCTGGTGCTGAGCAAGGTCTCACTGGCCCACAG | + |
|
Preference number: 1 (lower is better) Translates to: LAKYRFPSELGSCRM*QWGAGAEQGLTGPQ Trigger: CTGTGGGCCAGTGAGACCTTGCTCAGCACCAGCTCCCCACTGCCACATGCGGCAAGAGCCTAGTTCGGAGGGGAATCTGTATTTAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CCA 90 bp | GGAGAGGGCAGTAAGCCAACCGCTTGTCACAGTGATGCACCCACTTaGCACGATCAACTCCTGATCTCTGGGGAGCGCTACAGGACTGCG | + |
|
Preference number: 1 (lower is better) Translates to: GEGSKPTACHSDAPT*HDQLLISGERYRTA Trigger: CGCAGTCCTGTAGCGCTCCCCAGAGATCAGGAGTTGATCGTGCCAAGTGGGTGCATCACTGTGACAAGCGGTTGGCTTACTGCCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | ACCCACTGTAGGAGCCTCCCACCCCGGTTCCAGGTCTTTGTCAGCTaGTTAGCTACAAGGGGAGAGGGCAGTAAGCCAACCGCTTGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: THCRSLPPRFQVFVS*LATRGEGSKPTACH Trigger: GTGACAAGCGGTTGGCTTACTGCCCTCTCCCCTTGTAGCTAACCAGCTGACAAAGACCTGGAACCGGGGTGGGAGGCTCCTACAGTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | AGTGACTCGTACTGGCGCGACAGAAAGAGCTCCCTGTGTTTCAGCTaGTGCTTCTGCTTCTCCGTCAAGTCGGCCTCAACTGGCGTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: SDSYWRDRKSSLCFS*CFCFSVKSASTGVS Trigger: GGAGACGCCAGTTGAGGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGAGCTCTTTCTGTCGCGCCAGTACGAGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | TCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACGGCATaGGCCACCATAGGAGCTAAGAATAGCCATAATAAGCAGGAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: SWSSCLRLYSARVTA*ATIGAKNSHNKQER Trigger: CCTCTCCTGCTTATTATGGCTATTCTTAGCTCCTATGGTGGCTCATGCCGTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CCA 90 bp | CCCAAGGTGGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTaGGATTCTGGGCTCCACAGCTTGTCCCTGCTAATGGAGAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: PKVVARSDSSHLSQS*DSGLHSLSLLMERW Trigger: CCACCTCTCCATTAGCAGGGACAAGCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 90 bp | GCCGTGTCTCTCCTGTACATAATTTCACAGCATGAAACAAGAGGGTaGACACATGCAGGGCATTGGGGCTCTGGGCTCTCAGCAGCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: AVSLLYIISQHETRG*THAGHWGSGLSAAS Trigger: TGAGGCTGCTGAGAGCCCAGAGCCCCAATGCCCTGCATGTGTGCACCCTCTTGTTTCATGCTGTGAAATTATGTACAGGAGAGACACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | CTGCTAATGGAGAGGTGGCCACATCCTCTGCTTAGGGAGTTACTTTaGTGGCTGCAGCTAAGTGTAGAGGCTGGCAGAGGAGTCATCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LLMERWPHPLLRELL*WLQLSVEAGRGVIW Trigger: CCAGATGACTCCTCTGCCAGCCTCTACACTTAGCTGCAGCCACCAAAGTAACTCCCTAAGCAGAGGATGTGGCCACCTCTCCATTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | CCCTCCCATCAGTCACCCAGCTGCTTTAAGACACAGGCCCCAAGGTaGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATT | + |
|
Preference number: 1 (lower is better) Translates to: PSHQSPSCFKTQAPR*LQGQTLVTYHSPGI Trigger: AATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCCTGTGTCTTAAAGCAGCTGGGTGACTGATGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | CGAGGGCAGGGAACTACGATGAACGGCAGAAACACTGGCCTATTCTaGAGGAGAAGCCGCTCAGAAAGATGCCGTGTCTCTCCTGTACAT | + |
|
Preference number: 1 (lower is better) Translates to: RGQGTTMNGRNTGLF*RRSRSERCRVSPVH Trigger: ATGTACAGGAGAGACACGGCATCTTTCTGAGCGGCTTCTCCTTCAGAATAGGCCAGTGTTTCTGCCGTTCATCGTAGTTCCCTGCCCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | CTAATGGAGAGGTGGCCACATCCTCTGCTTAGGGAGTTACTTTGGTaGCTGCAGCTAAGTGTAGAGGCTGGCAGAGGAGTCATCTGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: LMERWPHPLLRELLW*LQLSVEAGRGVIWD Trigger: ATCCCAGATGACTCCTCTGCCAGCCTCTACACTTAGCTGCAGCCACCAAAGTAACTCCCTAAGCAGAGGATGTGGCCACCTCTCCATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | CGCTCAGAAAGATGCCGTGTCTCTCCTGTACATAATTTCACAGCATaGAACAAGAGGGTGCACACATGCAGGGCATTGGGGCTCTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: RSERCRVSPVHNFTA*NKRVHTCRALGLWA Trigger: AGCCCAGAGCCCCAATGCCCTGCATGTGTGCACCCTCTTGTTTCATGCTGTGAAATTATGTACAGGAGAGACACGGCATCTTTCTGAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | GCAGCTAAGTGTAGAGGCTGGCAGAGGAGTCATCTGGGATGTTACTaGAGGCTGGTTATTCAGGGCAGTAAAATAGGCAGGTCTCCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: AAKCRGWQRSHLGCY*RLVIQGSKIGRSPG Trigger: CCCTGGAGACCTGCCTATTTTACTGCCCTGAATAACCAGCCTTCAGTAACATCCCAGATGACTCCTCTGCCAGCCTCTACACTTAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | GATACAATAGCGAGGGCAGGGAACTACGATGAACGGCAGAAACACTaGCCTATTCTGAAGGAGAAGCCGCTCAGAAAGATGCCGTGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: DTIARAGNYDERQKH*PILKEKPLRKMPCL Trigger: GAGACACGGCATCTTTCTGAGCGGCTTCTCCTTCAGAATAGGCCAGTGTTTCTGCCGTTCATCGTAGTTCCCTGCCCTCGCTATTGTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | GCTCAGAGATGTGTGATTCGGAGCGGCGAGCATCCTCTTGGTAGCTaGAGTTTGCAGGCTTGGTGGAGACCGAATTACATTAGGTTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: AQRCVIRSGEHPLGS*SLQAWWRPNYIRFL Trigger: AAGAAACCTAATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATGCTCGCCGCTCCGAATCACACATCTCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 90 bp | AGGTCTCCAGGGGCCTCAGCACAAGCTCTCACAAAGACACTGAGCTaGAAGAGCGAGGGAACACAAAGCCATCTACAAAGATTTATATCT | + |
|
Preference number: 1 (lower is better) Translates to: RSPGASAQALTKTLS*KSEGTQSHLQRFIS Trigger: AGATATAAATCTTTGTAGATGGCTTTGTGTTCCCTCGCTCTTGCAGCTCAGTGTCTTTGTGAGAGCTTGTGCTGAGGCCCCTGGAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 90 bp | CCCAATGATACACGACAAAGGTTTCCTGGTGCTTCTGCTTTTCAGTaGGCTTCCAGAAAGTTCGGCATGTCTGTCTGCATATTCTGCCCT | + |
|
Preference number: 1 (lower is better) Translates to: PNDTRQRFPGASAFQ*ASRKFGMSVCIFCP Trigger: AGGGCAGAATATGCAGACAGACATGCCGAACTTTCTGGAAGCCCACTGAAAAGCAGAAGCACCAGGAAACCTTTGTCGTGTATCATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | TACTCAGAAGTACTTGAAGCCCGTGGACTTGGAGACTCTGCCCTCTaGTCAACCGGCGCCACAAAAGCAATCTCTTTTACAGTTTCTAGT | + |
|
Preference number: 1 (lower is better) Translates to: YSEVLEARGLGDSAL*STGATKAISFTVSS Trigger: ACTAGAAACTGTAAAAGAGATTGCTTTTGTGGCGCCGGTTGATCAGAGGGCAGAGTCTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 90 bp | CTGGTAGCATGTCTGGAATGTCAGCTTGGTACTTTGGGCCCACTCTaGTTTCACCTTTGTCAGCCAATAATGTTTTCACTGAAGGGTCGT | + |
|
Preference number: 1 (lower is better) Translates to: LVACLECQLGTLGPL*FHLCQPIMFSLKGR Trigger: ACGACCCTTCAGTGAAAACATTATTGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGACATGCTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 90 bp | CGGGCAATTAAAAACATGGATATGATGAAAGAAGTTAGGGACAGATaGCAAATCCAACGTGATCCACAGAATGCAGAGAAAGCCCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: RAIKNMDMMKEVRDR*QIQRDPQNAEKALE Trigger: CTCCAGGGCTTTCTCTGCATTCTGTGGATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTTTTTAATTGCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CAA 90 bp | TCCGGACCGGCATGCCCTGCAAGGCCTGCCGGGACATGTGGCTTCTaGCGCGCGGGTCCTCTGCAGTCGGGCTGGGAGACTTCTCTTCGT | + |
|
Preference number: 2 (lower is better) Translates to: SGPACPARPAGTCGF*RAGPLQSGWETSLR Trigger: ACGAAGAGAAGTCTCCCAGCCCGACTGCAGAGGACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAACTCCTGATCTCTGGGGAGCGCTACAGGACTGCGGGCAAACCAACCCCACCCCTCCATCTCGTCCCTaGAGAGGACTGGCCCTCCGA | + |
|
Preference number: 2 (lower is better) Translates to: STPDLWGALQDCGQTNPTPPSRP*RGLALR Trigger: TCGGAGGGCCAGTCCTCTGCAGGGACGAGATGGAGG...GGTGGGGTTGGTTTGCCCGCAGTCCTGTAGCGCTCCCCAGAGATCAGGAGTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGGCCGTCTCGCTGCCTGCCGCAGCCGCAGGGTGCTTTTGCAGACCTGACGAGAGGGTCGTATACCAGTaGGTAGAAGAAGGTATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: TAVSLPAAAAGCFCRPDERVVYQ*VEEGIL Trigger: GAGGATACCTTCTTCTACTCACTGGTATACGACCCT...CTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTCACCCAGCTGCTTTAAGACACAGGCCCCAAGGTGGTTGCAAGGTCAGACTACGGAGCCCTCCCACTaGAGGGGGCCACCTCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QSPSCFKTQAPRWLQGQTTEPSH*RGPPPF Trigger: GAAAGGAGGTGGCCCCCTTCAGTGGGAGGGCTCCGT...AGTCTGACCTTGCAACCACCTTGGGGCCTGTGTCTTAAAGCAGCTGGGTGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCGCCTCACGGAGCTGCTaGAGTCCAGGGCTCGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: ARSDSSHLSQSWDSGLHSASRSC*SPGLGQ Trigger: TTGCCCGAGCCCTGGACTGCAGCAGCTCCGTGAGGC...GCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCTCAAACGGCCGTCTCGCTaGCTGCCGCAGCCGCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: FSSSYGNSALQQPVWGSLKRPSR*LPQPQG Trigger: ACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGTTT...GAGGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCATCTCGTCCCTGCAGAGGACTGGCCCTCCGAGCGGCACCAGCACACTGATCTGTCGATCCGTAAGTaGGCTATTGGGGTCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LHLVPAEDWPSERHQHTDLSIRK*AIGVPN Trigger: GTTTGGGACCCCAATAGCCCACTTACGGATCGACAG...ATCAGTGTGCTGGTGCCGCTCGGAGGGCCAGTCCTCTGCAGGGACGAGATGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAACTCCTGATCTCTGGGGAGCGCTACAGGACTGCGGGCAAACCAACCCCACCAGGCTCCACAGAGGGTaGGAGCAAACCCTGTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: STPDLWGALQDCGQTNPTRLHRG*EQTLYK Trigger: CTTGTACAGGGTTTGCTCCCACCCTCTGTGGAGCCT...GGTGGGGTTGGTTTGCCCGCAGTCCTGTAGCGCTCCCCAGAGATCAGGAGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCCAAGGTGGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATGATGTCTCGGGAGGCTaGGGCTGCACTCATGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GPKVVARSDSSHLSQSWDDVSGG*GCTHVK Trigger: CTTCACATGAGTGCAGCCGCAGCCTCCCGAGACATC...ATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCCAGCTCCATTCACAGTaGCAGCCTTGCCGTTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ARSDSSHLSQSWDSGLHSQLHSQ*QPCRCC Trigger: GCAGCAACGGCAAGGCTGGCACTGTGAATGGAGCTG...GCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGGGCTCTGGGCTCTCAGCAGCCTCACGGCTGAGCCAACTGCATCTAGGAATGCCGCAGGGTGCTTTTaGAGACCTGACGAGCAATTT | + |
|
Preference number: 2 (lower is better) Translates to: LGLWALSSLTAEPTASRNAAGCF*RPDEQF Trigger: AAATTGCTCGTCAGGTCTGCAAAAGCACCCTGCGGC...ATTCCTAGATGCAGTTGGCTCAGCCGTGAGGCTGCTGAGAGCCCAGAGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGGCTCTGGGCTCTCAGCAGCCTCACGGCTGAGCCAACTGCATCTAGGAATTCCCTGTGTTTCAGCTaGTGCTTCTGCTTCTCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: LGLWALSSLTAEPTASRNSLCFS*CFCFSV Trigger: GACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGA...ATTCCTAGATGCAGTTGGCTCAGCCGTGAGGCTGCTGAGAGCCCAGAGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CAA 90 bp | GACTCTAGTCACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCTaGTCCCTGCTAATGGAGAGGTGGCCACATCCTCTGCTTAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DSSHLSQSWDSGLHS*SLLMERWPHPLLRE Trigger: CTCCCTAAGCAGAGGATGTGGCCACCTCTCCATTAGCAGGGACAAGCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCTCGGAGACTCTGCCCTCTaGTCAACCGGCGCCACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FSSSYGNSALQQPVWGSLGDSAL*STGATK Trigger: TTTTGTGGCGCCGGTTGATCAGAGGGCAGAGTCTCC...GAGGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCAACCGCTTGTCACAGTaGTGCACCCACTTGGCACGA | + |
|
Preference number: 2 (lower is better) Translates to: ARSDSSHLSQSWDSGLHSNRLSQ*CTHLAR Trigger: TCGTGCCAAGTGGGTGCATCACTGTGACAAGCGGTT...GCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCCCAAGGTGGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATAAAATGGGGGTTCCATaGCCCACTGTAGGAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GPKVVARSDSSHLSQSWDKMGVP*PTVGAS Trigger: GGAGGCTCCTACAGTGGGTCATGGAACCCCCATTTT...ATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCCAAGGTGGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTTCAGCTGGTGCTTCTaGTTCTCCGTCAAGTCGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GPKVVARSDSSHLSQSWDFSWCF*FSVKSA Trigger: GGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAA...ATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCACCTCCTTTCCAGGCATGGCTGTGACCACCAGCAGGACAGTAGCAGATGTCCTTGCCGTTGCTGCTaGAGATTTGGTTGGGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: GHLLSRHGCDHQQDSSRCPCRCC*RFGWDL Trigger: CAAATCCCAACCAAATCTCCAGCAGCAACGGCAAGG...ACATCTGCTACTGTCCTGCTGGTGGTCACAGCCATGCCTGGAAAGGAGGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCTCTTCACTGCAGACTTaGGGCTTCCGGTGTTCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: ARSDSSHLSQSWDSGLHSSSLQT*GFRCSG Trigger: TCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGA...GCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CAA 90 bp | GGGATTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTaGGGGGTCCCTCCCATCAGTCACCCAGCTGCTTTAAGACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: GIQFQLWQLCLATTC*GVPPISHPAALRHR Trigger: CCTGTGTCTTAAAGCAGCTGGGTGACTGATGGGAGGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCTTGGTAGCTGGAGTTTaGAGGCTTGGTGGAGACCGA | + |
|
Preference number: 2 (lower is better) Translates to: ARSDSSHLSQSWDSGLHSLVAGV*RLGGDR Trigger: TCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAA...GCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCCAAGGTGGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATCATCCTCTTGGTAGCTaGAGTTTGCAGGCTTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GPKVVARSDSSHLSQSWDHPLGS*SLQAWW Trigger: CCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATG...ATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CAA 90 bp | TCCCATCAGTCACCCAGCTGCTTTAAGACACAGGCCCCAAGGTGGTaGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SHQSPSCFKTQAPRW*QGQTLVTYHSPGIL Trigger: CAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCCTGTGTCTTAAAGCAGCTGGGTGACTGATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGCCAAATCCAACGTGATCCACAGAATGCAGAGAAAGCCCTGGAGATCACTGCAGGAGAGGACAGAGTaGTCCCAGCCCGTCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: DAKSNVIHRMQRKPWRSLQERTE*SQPVRE Trigger: TTCTCTGACGGGCTGGGACCACTCTGTCCTCTCCTG...CAGTGATCTCCAGGGCTTTCTCTGCATTCTGTGGATCACGTTGGATTTGGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCTCGCTAAGTGTAGAGGCTaGCAGAGGAGTCATCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: FSSSYGNSALQQPVWGSLAKCRG*QRSHLG Trigger: TCCCAGATGACTCCTCTGCCAGCCTCTACACTTAGC...GAGGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CAA 90 bp | AGATGTGTGATTCGGAGCGGCGAGCATCCTCTTGGTAGCTGGAGTTaGCAGGCTTGGTGGAGACCGAATTACATTAGGTTTCTTTGCGGG | + |
|
Preference number: 2 (lower is better) Translates to: RCVIRSGEHPLGSWS*QAWWRPNYIRFLCG Trigger: CCCGCAAAGAAACCTAATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATGCTCGCCGCTCCGAATCACACATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | GATTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCCTACTCAGAAGTACTTaGAGCCCGTGGACTTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: DSVPAMATLPCNNLFGGPLLRST*SPWTWR Trigger: TCTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTAG...GGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAAGATGCCGTGTCTCTCCTGTACATAATTTCACAGCATGAAACAAGAGGGGCCGCAGCCGCAGGGTaGTTTTGCAGACCTGACGAG | + |
|
Preference number: 2 (lower is better) Translates to: QKDAVSLLYIISQHETRGAAAAG*FCRPDE Trigger: CTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGC...CCCTCTTGTTTCATGCTGTGAAATTATGTACAGGAGAGACACGGCATCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTGATCCACAGAATGCAGAGAAAGCCCTGGAGATCACTGAGGGTTCGACACGACAGCAGCAGGAACACTaGCTAAATACAGATTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: RDPQNAEKALEITEGSTRQQQEH*LNTDSP Trigger: AGGGGAATCTGTATTTAGCCAGTGTTCCTGCTGCTG...TCGTGTCGAACCCTCAGTGATCTCCAGGGCTTTCTCTGCATTCTGTGGATCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCCAAGGTGGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTTCTCTTCGTCTGACTaGGTAGGCATTTTCAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: GPKVVARSDSSHLSQSWDFSSSD*VGIFRP Trigger: AGGTCTGAAAATGCCTACCCAGTCAGACGAAGAGAA...ATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CAA 90 bp | GTTCCCTATTGTTTGACTACTCAGAAGTACTTGAAGCCCGTGGACTaGGAGACTCTGCCCTCTGATCAACCGGCGCCACAAAAGCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: VPYCLTTQKYLKPVD*ETLPSDQPAPQKQS Trigger: AGATTGCTTTTGTGGCGCCGGTTGATCAGAGGGCAGAGTCTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTAGTCAAACAATAGGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTCACCCAGCTGCTTTAAGACACAGGCCCCAAGGTGGTTGCAAGGTCAGACTGAAAAGGTGGCTTACTaGGGAAAAAGCCAAGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: QSPSCFKTQAPRWLQGQTEKVAY*GKSQEI Trigger: TATCTCTTGGCTTTTTCCTCAGTAAGCCACCTTTTC...AGTCTGACCTTGCAACCACCTTGGGGCCTGTGTCTTAAAGCAGCTGGGTGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTGGAATGTCAGCTTGGTACTTTGGGCCCACTCTGATTTCACCTTTGTCAGCCTCCTTGTCAAGGTATaGCAACACGGATTCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: VWNVSLVLWAHSDFTFVSLLVKV*QHGFCL Trigger: GAGACAGAATCCGTGTTGTCATACCTTGACAAGGAG...GCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTGTCCCTGCTAATGGAGAGGTGGCCACATCCTCTGCTTAGGGAGTTACTTCATAATTTCACAGCATaGAACAAGAGGGTGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: SLSLLMERWPHPLLRELLHNFTA*NKRVHT Trigger: TGTGTGCACCCTCTTGTTTCATGCTGTGAAATTATG...AAGTAACTCCCTAAGCAGAGGATGTGGCCACCTCTCCATTAGCAGGGACAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCTCGATTTGGTTGGGATTTaGTTTGTAAGTCGGGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: FSSSYGNSALQQPVWGSLDLVGI*FVSRDV Trigger: TACATCCCGACTTACAAACCAAATCCCAACCAAATC...GAGGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCACCCTTATATCCCACCCCTCAGGCTCAACAGAGTCTACTTCAAATAAAAACTGATGAGACTGTGTaGCGTAGCAGCTCTCGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: FPPLYPTPQAQQSLLQIKTDETV*RSSSRR Trigger: CCTGCGAGAGCTGCTACGCCACACAGTCTCATCAGT...TTTTATTTGAAGTAGACTCTGTTGAGCCTGAGGGGTGGGATATAAGGGTGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTTCCCTATTGTTTGACTACTCAGAAGTACTTGAAGCCCGTGGACTTGGAGACTTTGGGCCCACTCTaGTTTCACCTTTGTCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: NVPYCLTTQKYLKPVDLETLGPL*FHLCQP Trigger: TGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGT...CTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTAGTCAAACAATAGGGAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACTGGCCTATTCTGAAGGAGAAGCCGCTCAGAAAGATGCCGTGTCTCTCCTGTTTACAGTTTCTAGTTaGAGGCTTCTGAGTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: TLAYSEGEAAQKDAVSLLFTVSS*RLLSSC Trigger: ACATGAACTCAGAAGCCTGCAACTAGAAACTGTAAA...CAGGAGAGACACGGCATCTTTCTGAGCGGCTTCTCCTTCAGAATAGGCCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCAAACCCTGTACAAGATaGAGAAAGGAAAGAATAGTT | + |
|
Preference number: 2 (lower is better) Translates to: ARSDSSHLSQSWDSGLHSKPCTR*RKERIV Trigger: AACTATTCTTTCCTTTCTGCATCTTGTACAGGGTTT...GCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTGTCCCTGCTAATGGAGAGGTGGCCACATCCTCTGCTTAGGGAGTTACTTGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA | + |
|
Preference number: 2 (lower is better) Translates to: SLSLLMERWPHPLLRELLATTKN*SICRSV Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...AAGTAACTCCCTAAGCAGAGGATGTGGCCACCTCTCCATTAGCAGGGACAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTACTGAGGAAAAAGCCAAGAGATACAATAGCGAGGGCAGGGAACTACGATCTGTCTGCATATTCTaGCCTAATGGCAGCATAATT | + |
|
Preference number: 2 (lower is better) Translates to: WLTEEKAKRYNSEGRELRSVCIF*PNGSII Trigger: AATTATGCTGCCATTAGGGCAGAATATGCAGACAGA...TCGTAGTTCCCTGCCCTCGCTATTGTATCTCTTGGCTTTTTCCTCAGTAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGTGAGGAAGAAAAGGTGGCTTACTGAGGAAAAAGCCAAGAGATACAATAGCACGACAAAGGTTTCCTaGTGCTTCTGCTTTTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PVRKKRWLTEEKAKRYNSTTKVS*CFCFSV Trigger: CACTGAAAAGCAGAAGCACCAGGAAACCTTTGTCGT...GCTATTGTATCTCTTGGCTTTTTCCTCAGTAAGCCACCTTTTCTTCCTCACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAAGATGCCGTGTCTCTCCTGTACATAATTTCACAGCATGAAACAAGAGGGGTGCTTTTGCAGACCTaGCGAGCAATTTTTGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QKDAVSLLYIISQHETRGVLLQT*RAIFVK Trigger: TTTCACAAAAATTGCTCGTCAGGTCTGCAAAAGCAC...CCCTCTTGTTTCATGCTGTGAAATTATGTACAGGAGAGACACGGCATCTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTTCCCTATTGTTTGACTACTCAGAAGTACTTGAAGCCCGTGGACTTGGAGTCTCTAAATACCCAATaGTACACGACAAAGGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NVPYCLTTQKYLKPVDLESLNTQ*YTTKVS Trigger: GGAAACCTTTGTCGTGTATCATTGGGTATTTAGAGA...CTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTAGTCAAACAATAGGGAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCACCCTTATATCCCACCCCTCAGGCTCAACAGAGTCTACTTCAAATAAAAGGTTTCTTTGCGGGATaGATCTCTAAATACCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: FPPLYPTPQAQQSLLQIKGFFAG*ISKYPM Trigger: CATTGGGTATTTAGAGATCCATCCCGCAAAGAAACC...TTTTATTTGAAGTAGACTCTGTTGAGCCTGAGGGGTGGGATATAAGGGTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | CGGACCGGCATGCCCTGCAAGGCCTGCCGGGACATGTaGCTTCTTGCGCGCGGGTCCTCTGCAGTCGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTGMPCKACRDM*LLARGSSAVGL Trigger: CAGCCCGACTGCAGAGGACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGCCGGTCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | CTTCCGGTGTTCCGGACCGGCATGCCCTGCAAGGCCTaGCGGGACATGTGGCTTCTTGCGCGCGGGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPVFRTGMPCKA*RDMWLLARGSS Trigger: AGAGGACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACACCGGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | CTCTCGCAGGCTCGCCCTAGGAGGGCGCTCTGGGGCTaGAACTGGGTCCCCACAGCTCCATTCACAGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSQARPRRALWG*NWVPTAPFTVP Trigger: TGGCACTGTGAATGGAGCTGTGGGGACCCAGTTTCAGCCCCAGAGCGCCCTCCTAGGGCGAGCCTGCGAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | CTGCAGACTTGGGGCTTCCGGTGTTCCGGACCGGCATaGCCTGCAAGGCCTGCCGGGACATGTGGCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LQTWGFRCSGPA*PARPAGTCGFL Trigger: CAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACACCGGAAGCCCCAAGTCTGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | AGGCTCTTGCCGCATGTGGCAGTGGGGAGCTGGTGCTaGGCAAGGTCTCACTGGCCCACAGCAGCCTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: RLLPHVAVGSWC*ARSHWPTAALP Trigger: GGGTAAGGCTGCTGTGGGCCAGTGAGACCTTGCTCAGCACCAGCTCCCCACTGCCACATGCGGCAAGAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR GCA 72 bp | TGCTCCTACAGTTTCTTCCCTGCCCCCTTCTGGGCTTaGAAGGGGTGCACACGGAGCCCTCCCACTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CSYSFFPAPFWA*KGCTRSPPTEG Trigger: CCCTTCAGTGGGAGGGCTCCGTGTGCACCCCTTGCAAGCCCAGAAGGGGGCAGGGAAGAAACTGTAGGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | ACTGTGTGCTCCTACAGTTTCTTCCCTGCCCCCTTCTaGGCTTGCAAGGGGTGCACACGGAGCCCTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: TVCSYSFFPAPF*ACKGCTRSPPT Trigger: AGTGGGAGGGCTCCGTGTGCACCCCTTGCAAGCCCAGAAGGGGGCAGGGAAGAAACTGTAGGAGCACACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | CAGCATGAAACAAGAGGGTGCACACATGCAGGGCATTaGGGCTCTGGGCTCTCAGCAGCCTCACGGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QHETRGCTHAGH*GSGLSAASRLS Trigger: GCTCAGCCGTGAGGCTGCTGAGAGCCCAGAGCCCCAATGCCCTGCATGTGTGCACCCTCTTGTTTCATGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | CACGCTGCACTTCCCCCTGATATGTGTCGCAGGCAGTaGCTCGTACTGGCGCGACAGAAAGAGCTCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HAALPPDMCRRQ*LVLARQKELPV Trigger: CACAGGGAGCTCTTTCTGTCGCGCCAGTACGAGTCACTGCCTGCGACACATATCAGGGGGAAGTGCAGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | CAAGGTCTCACTGGCCCACAGCAGCCTTACCCTTCATaGCCTTACCGGCTCACATTCCCACCAACCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QGLTGPQQPYPS*PYRLTFPPTSG Trigger: CCCAGAGGTTGGTGGGAATGTGAGCCGGTAAGGGCATGAAGGGTAAGGCTGCTGTGGGCCAGTGAGACCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CCA 72 bp | AGGAGCCTCCCACCCCGGTTCCAGGTCTTTGTCAGCTaGTTAGCTACAAGGGGAGAGGGCAGTAAGCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: RSLPPRFQVFVS*LATRGEGSKPT Trigger: GGTTGGCTTACTGCCCTCTCCCCTTGTAGCTAACCAGCTGACAAAGACCTGGAACCGGGGTGGGAGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGGCCGTCTCGCTGCCTGCCGCAGCCGCAGGGTGCTTTTGCAGACCTGACGAGAAGAAGGTATCCTCCTaGTCAAGGTATGACAACACG | + |
|
Preference number: 3 (lower is better) Translates to: TAVSLPAAAAGCFCRPDEKKVSS*SRYDNT Trigger: CGTGTTGTCATACCTTGACAAGGAGGATACCTTCTT...CTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGTCCCTGCTAATGGAGAGGTGGCCACATCCTCTGCTTAGGGAGTTACTTTGCCCCCTTCTGGGCTaGCAAGGGGTGCACACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLSLLMERWPHPLLRELLCPLLG*QGVHTE Trigger: CTCCGTGTGCACCCCTTGCAAGCCCAGAAGGGGGCA...AAGTAACTCCCTAAGCAGAGGATGTGGCCACCTCTCCATTAGCAGGGACAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | GTCACAGTGATGCACCCACTTGGCACGATCAACTCCTaGTCTCTGGGGAGCGCTACAGGACTGCGGGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VTVMHPLGTINS*SLGSATGLRAN Trigger: GTTTGCCCGCAGTCCTGTAGCGCTCCCCAGAGATCAGGAGTTGATCGTGCCAAGTGGGTGCATCACTGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | TGGCGCGACAGAAAGAGCTCCCTGTGTTTCAGCTGGTaGTTCTGCTTCTCCGTCAAGTCGGCCTCAACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: WRDRKSSLCFSW*FCFSVKSASTG Trigger: GCCAGTTGAGGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGAGCTCTTTCTGTCGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | ACAGATCCAGACTGTGTGCTCCTACAGTTTCTTCCCTaGCCCCTTCTGGGCTTGCAAGGGGTGCACACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TDPDCVLLQFLP*PLLGLQGVHTE Trigger: CTCCGTGTGCACCCCTTGCAAGCCCAGAAGGGGGCAGGGAAGAAACTGTAGGAGCACACAGTCTGGATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | TACAGATTCCCCTCCGAACTAGGCTCTTGCCGCATGTaGCAGTGGGGAGCTGGTGCTGAGCAAGGTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: YRFPSELGSCRM*QWGAGAEQGLT Trigger: AGTGAGACCTTGCTCAGCACCAGCTCCCCACTGCCACATGCGGCAAGAGCCTAGTTCGGAGGGGAATCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CCA 72 bp | AGCAGCCTCACGGCTGAGCCAACTGCATCTAGGAATTaGGCACTGGGAAGCCAGGAGGTTGAAAGTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLTAEPTASRN*ALGSQEVESPP Trigger: GGGAGGACTTTCAACCTCCTGGCTTCCCAGTGCCCAATTCCTAGATGCAGTTGGCTCAGCCGTGAGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGACCCTCAGGCTCCACAGAGGGTGGGAGCAAACCCTGTACAAGATGCAGAATTCACAGTGCCAGCCTaGCCGTTGCTGCTGGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: PDPQAPQRVGANPVQDAEFTVPA*PLLLEI Trigger: AATCTCCAGCAGCAACGGCAAGGCTGGCACTGTGAA...TTCTGCATCTTGTACAGGGTTTGCTCCCACCCTCTGTGGAGCCTGAGGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCTCTGGGAAGCCAGGAGGTaGAAAGTCCTCCCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSSSYGNSALQQPVWGSLWEARR*KVLPCL Trigger: GAGGCAGGGGAGGACTTTCAACCTCCTGGCTTCCCA...GAGGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | TTCCCCCTGATATGTGTCGCAGGCAGTGACTCGTACTaGCGCGACAGAAAGAGCTCCCTGTGTTTCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FPLICVAGSDSY*RDRKSSLCFSW Trigger: CCAGCTGAAACACAGGGAGCTCTTTCTGTCGCGCCAGTACGAGTCACTGCCTGCGACACATATCAGGGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCCTTGGTAGCTGGAGTTaGCAGGCTTGGTGGAGACCG | + |
|
Preference number: 3 (lower is better) Translates to: DSVPAMATLPCNNLFGGPLGSWS*QAWWRP Trigger: CGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAG...GGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | AGGGCACTTGAAGGAGTCGGTTCTCTCCTTTCACCATaGGGGTCCCAGGGATCAAACTCAGGTCACCGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RALEGVGSLLSP*GSQGSNSGHRL Trigger: AAGCCGGTGACCTGAGTTTGATCCCTGGGACCCTCATGGTGAAAGGAGAGAACCGACTCCTTCAAGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| 3UTR GCA 72 bp | CACTGGTCACACATGGAGTCACAGATCCAGACTGTGTaGTCCTACAGTTTCTTCCCTGCCCCCTTCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HWSHMESQIQTV*SYSFFPAPFWA Trigger: AGCCCAGAAGGGGGCAGGGAAGAAACTGTAGGAGCACACAGTCTGGATCTGTGACTCCATGTGTGACCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | CTCTGGAACAGCAAGGTCTCCGGGAAGGAAGCTAGGTaGCACTGGTCACACATGGAGTCACAGATCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LWNSKVSGKEAR*HWSHMESQIQT Trigger: AGTCTGGATCTGTGACTCCATGTGTGACCAGTGGCACCTAGCTTCCTTCCCGGAGACCTTGCTGTTCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | GCTAAGAATAGCCATAATAAGCAGGAGAGGACAGAGTaGTCCCAGCCCGTCAGAGAAGGAGGCTCCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AKNSHNKQERTE*SQPVREGGSSG Trigger: CCCTGAGGAGCCTCCTTCTCTGACGGGCTGGGACCACTCTGTCCTCTCCTGCTTATTATGGCTATTCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CCA 72 bp | AAACTCATTTGGTGGCCAGAATCGGCCTTAAACTCCTaGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KLIWWPESALNS*SSCLRLYSARV Trigger: AACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCACCAAATGAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CCA 72 bp | TACTGGCGCGACAGAAAGAGCTCCCTGTGTTTCAGCTaGTGCTTCTGCTTCTCCGTCAAGTCGGCCTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: YWRDRKSSLCFS*CFCFSVKSAST Trigger: AGTTGAGGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGAGCTCTTTCTGTCGCGCCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | AACAGCAAGGTCTCCGGGAAGGAAGCTAGGTGCCACTaGTCACACATGGAGTCACAGATCCAGACTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: NSKVSGKEARCH*SHMESQIQTVC Trigger: GCACACAGTCTGGATCTGTGACTCCATGTGTGACCAGTGGCACCTAGCTTCCTTCCCGGAGACCTTGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | AGTAAGCCAACCGCTTGTCACAGTGATGCACCCACTTaGCACGATCAACTCCTGATCTCTGGGGAGCGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SKPTACHSDAPT*HDQLLISGERY Trigger: GTAGCGCTCCCCAGAGATCAGGAGTTGATCGTGCCAAGTGGGTGCATCACTGTGACAAGCGGTTGGCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | AGGTGGCCACATCCTCTGCTTAGGGAGTTACTTTGGTaGCTGCAGCTAAGTGTAGAGGCTGGCAGAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RWPHPLLRELLW*LQLSVEAGRGV Trigger: GACTCCTCTGCCAGCCTCTACACTTAGCTGCAGCCACCAAAGTAACTCCCTAAGCAGAGGATGTGGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | GAGAGGTGGCCACATCCTCTGCTTAGGGAGTTACTTTaGTGGCTGCAGCTAAGTGTAGAGGCTGGCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ERWPHPLLRELL*WLQLSVEAGRG Trigger: TCCTCTGCCAGCCTCTACACTTAGCTGCAGCCACCAAAGTAACTCCCTAAGCAGAGGATGTGGCCACCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | TCTGGGCTCCACAGCTTGTCCCTGCTAATGGAGAGGTaGCCACATCCTCTGCTTAGGGAGTTACTTTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGLHSLSLLMER*PHPLLRELLWW Trigger: CCACCAAAGTAACTCCCTAAGCAGAGGATGTGGCCACCTCTCCATTAGCAGGGACAAGCTGTGGAGCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | GCTGCCTGCCGCAGCCGCAGGGTGCTTTTGCAGACCTaGCGAGCAATTTTTGTGAAATACGTAGTACGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AACRSRRVLLQT*RAIFVKYVVRR Trigger: CCTTCGTACTACGTATTTCACAAAAATTGCTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGCAGGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | TCTCCGGGAAGGAAGCTAGGTGCCACTGGTCACACATaGAGTCACAGATCCAGACTGTGTGCTCCTACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPGRKLGATGHT*SHRSRLCAPTV Trigger: AACTGTAGGAGCACACAGTCTGGATCTGTGACTCCATGTGTGACCAGTGGCACCTAGCTTCCTTCCCGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | TCCTGCCTCCGCCTCTACAGTGCCAGGGTTACGGCATaGGCCACCATAGGAGCTAAGAATAGCCATAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCLRLYSARVTA*ATIGAKNSHNK Trigger: CTTATTATGGCTATTCTTAGCTCCTATGGTGGCTCATGCCGTAACCCTGGCACTGTAGAGGCGGAGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR GCA 72 bp | TTCGGAGCGGCGAGCATCCTCTTGGTAGCTGGAGTTTaGAGGCTTGGTGGAGACCGAATTACATTAGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FGAASILLVAGV*RLGGDRITLGF Trigger: GAAACCTAATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATGCTCGCCGCTCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | GGGGCCTCAGCACAAGCTCTCACAAAGACACTGAGCTaGAAGAGCGAGGGAACACAAAGCCATCTACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GASAQALTKTLS*KSEGTQSHLQR Trigger: TCTTTGTAGATGGCTTTGTGTTCCCTCGCTCTTGCAGCTCAGTGTCTTTGTGAGAGCTTGTGCTGAGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | TGTGTGATTCGGAGCGGCGAGCATCCTCTTGGTAGCTaGAGTTTGCAGGCTTGGTGGAGACCGAATTACATT | + |
|
Preference number: 3 (lower is better) Translates to: CVIRSGEHPLGS*SLQAWWRPNYI Trigger: AATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATGCTCGCCGCTCCGAATCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | GTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTaGGATTCTGGGCTCCACAGCTTGTCCCTGCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: VARSDSSHLSQS*DSGLHSLSLLM Trigger: CATTAGCAGGGACAAGCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | CAGTCACCCAGCTGCTTTAAGACACAGGCCCCAAGGTaGTTGCAAGGTCAGACTCTAGTCACCTATCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: QSPSCFKTQAPR*LQGQTLVTYHS Trigger: ACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCCTGTGTCTTAAAGCAGCTGGGTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGTTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTCCCACTACTCAGAAGTACTaGAAGCCCGTGGACTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DSVPAMATLPCNNLFGGPTTQKY*KPVDLE Trigger: CTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTAGT...GGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAAGATGCCGTGTCTCTCCTGTACATAATTTCACAGCATGAAACAAGAGGGCACACATGCAGGGCATaGGGGCTCTGGGCTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QKDAVSLLYIISQHETRGHTCRA*GLWALS Trigger: GCTGAGAGCCCAGAGCCCCAATGCCCTGCATGTGTG...CCCTCTTGTTTCATGCTGTGAAATTATGTACAGGAGAGACACGGCATCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGAGGAAGAAAAGGTGGCTTACTGAGGAAAAAGCCAAGAGATACAATAGCGTCTTCACTGCAGACTaGGGGCTTCCGGTGTTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: PVRKKRWLTEEKAKRYNSVFTAD*GLPVFR Trigger: CCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGAC...GCTATTGTATCTCTTGGCTTTTTCCTCAGTAAGCCACCTTTTCTTCCTCACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | GGAACTACGATGAACGGCAGAAACACTGGCCTATTCTaGAGGAGAAGCCGCTCAGAAAGATGCCGTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GTTMNGRNTGLF*RRSRSERCRVS Trigger: AGAGACACGGCATCTTTCTGAGCGGCTTCTCCTTCAGAATAGGCCAGTGTTTCTGCCGTTCATCGTAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | AGATGCCGTGTCTCTCCTGTACATAATTTCACAGCATaGAACAAGAGGGTGCACACATGCAGGGCATTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RCRVSPVHNFTA*NKRVHTCRALG Trigger: CCCCAATGCCCTGCATGTGTGCACCCTCTTGTTTCATGCTGTGAAATTATGTACAGGAGAGACACGGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | TGTAGAGGCTGGCAGAGGAGTCATCTGGGATGTTACTaGAGGCTGGTTATTCAGGGCAGTAAAATAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CRGWQRSHLGCY*RLVIQGSKIGR Trigger: CCTGCCTATTTTACTGCCCTGAATAACCAGCCTTCAGTAACATCCCAGATGACTCCTCTGCCAGCCTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | TCTGCAGTCGGGCTGGGAGACTTCTCTTCGTCTGACTaGGTAGGCATTTTCAGACCTCCATACTTTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SAVGLGDFSSSD*VGIFRPPYFFQ Trigger: TTGGAAAAAGTATGGAGGTCTGAAAATGCCTACCCAGTCAGACGAAGAGAAGTCTCCCAGCCCGACTGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | GAGTCTCCTTCTGGTAGCATGTCTGGAATGTCAGCTTaGTACTTTGGGCCCACTCTGATTTCACCTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ESPSGSMSGMSA*YFGPTLISPLS Trigger: TGACAAAGGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGACATGCTACCAGAAGGAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | GACAATTTACTCTCCTTAGGGATTCAGTTCCAGCTATaGCAACTCTGCCTTGCAACAACCTGTTTGGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DNLLSLGIQFQL*QLCLATTCLGV Trigger: GACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAACTGAATCCCTAAGGAGAGTAAATTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCCAAGGTGGTTGCAAGGTCAGACTCTAGTCACCTATCACAGTCCTGGGATAATGTTCCCTATTGTTaGACTACTCAGAAGTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GPKVVARSDSSHLSQSWDNVPYC*TTQKYL Trigger: CAAGTACTTCTGAGTAGTCAAACAATAGGGAACATT...ATCCCAGGACTGTGATAGGTGACTAGAGTCTGACCTTGCAACCACCTTGGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGTCAGAGGGCACTaGAAGGAGTCGGTTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YILLICVCVCVCVCVCVCEVRGH*KESVLS Trigger: GGAGAGAACCGACTCCTTCAAGTGCCCTCTGACCTC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGGCCTATTCTGAAGGAGAAGCCGCTCAGAAAGATGCCGTGTCTCTCCTGACTCTGATTTCACCTTaGTCAGCCAATAATGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLAYSEGEAAQKDAVSLLTLISP*SANNVF Trigger: GAAAACATTATTGGCTGACAAAGGTGAAATCAGAGT...CAGGAGAGACACGGCATCTTTCTGAGCGGCTTCTCCTTCAGAATAGGCCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR CCA 72 bp | CCCTTCCGAAAATCAGAGAATTCACCATCCGAATCTTaGAGGCATCTAGACCATTGTGATGGCTGTAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PFRKSENSPSES*RHLDHCDGCSF Trigger: GAAACTACAGCCATCACAATGGTCTAGATGCCTCCAAGATTCGGATGGTGAATTCTCTGATTTTCGGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR TCA 72 bp | TGTCTGGAATGTCAGCTTGGTACTTTGGGCCCACTCTaGTTTCACCTTTGTCAGCCAATAATGTTTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: CLECQLGTLGPL*FHLCQPIMFSL Trigger: CAGTGAAAACATTATTGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGAGGAAGAAAAGGTGGCTTACTGAGGAAAAAGCCAAGAGATACAATAGCAGATTTGGTTGGGATTaGGTTTGTAAGTCGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: PVRKKRWLTEEKAKRYNSRFGWD*VCKSGC Trigger: ACATCCCGACTTACAAACCAAATCCCAACCAAATCT...GCTATTGTATCTCTTGGCTTTTTCCTCAGTAAGCCACCTTTTCTTCCTCACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| 3UTR GCA 72 bp | AAAAACATGGATATGATGAAAGAAGTTAGGGACAGATaGCAAATCCAACGTGATCCACAGAATGCAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KNMDMMKEVRDR*QIQRDPQNAEK Trigger: TTTCTCTGCATTCTGTGGATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CAA 72 bp | GCATGCCCTGCAAGGCCTGCCGGGACATGTGGCTTCTaGCGCGCGGGTCCTCTGCAGTCGGGCTGGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ACPARPAGTCGF*RAGPLQSGWET Trigger: AGTCTCCCAGCCCGACTGCAGAGGACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGCATGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| CDS-3UTR GCA 90 bp | ATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACTGTTCCGGACCGGCATaGCCTGCAAGGCCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGLKLLVLLPPPLQCQGYCSGPA*PARPAG Trigger: CCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACA...GTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | TGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCCCTCCATCTCGTCCCTaGAGAGGACTGGCCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: WPESALNSWSSCLRLYSAPPSRP*RGLALR Trigger: TCGGAGGGCCAGTCCTCTGCAGGGACGAGATGGAGG...GGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGAGGGCGCTCTGGGGCTaGAACTGGGTCCCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRRALWG*NWVPTA Trigger: AGCTGTGGGGACCCAGTTTCAGCCCCAGAGCGCCCT...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGGCCTCACGGAGCTGCTaGAGTCCAGGGCTCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRASRSC*SPGLGQ Trigger: TTGCCCGAGCCCTGGACTGCAGCAGCTCCGTGAGGC...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGTGTTCCGGACCGGCATaGCCTGCAAGGCCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSECSGPA*PARPAG Trigger: CCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACA...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGTGTTCCGGACCGGCATaGCCTGCAAGGCCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKCSGPA*PARPAG Trigger: CCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACA...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGAAACGGCCGTCTCGCTaGCTGCCGCAGCCGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEKRPSR*LPQPQG Trigger: ACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGTTT...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGAAACGGCCGTCTCGCTaGCTGCCGCAGCCGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKKRPSR*LPQPQG Trigger: ACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGTTT...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR TCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGGCGCTCTGGGGCTaGAACTGGGTCCCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGRALWG*NWVPTA Trigger: AGCTGTGGGGACCCAGTTTCAGCCCCAGAGCGCCCT...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAGCCTCACGGAGCTGCTaGAGTCCAGGGCTCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGASRSC*SPGLGQ Trigger: TTGCCCGAGCCCTGGACTGCAGCAGCTCCGTGAGGC...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACGGCAGATGTCTCGGGAGGCTaGGGCTGCACTCATGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALNSWSSCLRLYSARVTADVSGG*GCTHVK Trigger: CTTCACATGAGTGCAGCCGCAGCCTCCCGAGACATC...TGCCGTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | TGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCCAGCTCCATTCACAGTaGCAGCCTTGCCGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WPESALNSWSSCLRLYSAQLHSQ*QPCRCC Trigger: GCAGCAACGGCAAGGCTGGCACTGTGAATGGAGCTG...GGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAATGTTCCGGACCGGCATaGCCTGCAAGGCCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAECSGPA*PARPAG Trigger: CCCGGCAGGCCTTGCAGGGCATGCCGGTCCGGAACA...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAAAACGGCCGTCTCGCTaGCTGCCGCAGCCGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAEKRPSR*LPQPQG Trigger: ACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGTTT...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGACCTCCATCTCGTCCCTaGAGAGGACTGGCCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGPPSRP*RGLALR Trigger: TCGGAGGGCCAGTCCTCTGCAGGGACGAGATGGAGG...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACGGCATGAGCCAGCCGCAGGGTGCTTTTaGAGACCTGACGAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TPGPPASASTVPGLRHEPAAGCF*RPDEQF Trigger: AAATTGCTCGTCAGGTCTGCAAAAGCACCCTGCGGC...TGGCTCATGCCGTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGGCCGCAGCCGCAGGGTaGTTTTGCAGACCTGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEAAAAG*FCRPDE Trigger: CTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGC...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGGCCGCAGCCGCAGGGTaGTTTTGCAGACCTGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRAAAAG*FCRPDE Trigger: CTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGC...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAGCCGCAGCCGCAGGGTaGTTTTGCAGACCTGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGAAAAG*FCRPDE Trigger: CTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGC...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGGATGTCTCGGGAGGCTaGGGCTGCACTCATGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRDVSGG*GCTHVK Trigger: CTTCACATGAGTGCAGCCGCAGCCTCCCGAGACATC...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGCAGCTCCATTCACAGTaGCAGCCTTGCCGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRQLHSQ*QPCRCC Trigger: GCAGCAACGGCAAGGCTGGCACTGTGAATGGAGCTG...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACGGCATCCCTGTGTTTCAGCTaGTGCTTCTGCTTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALNSWSSCLRLYSARVTASLCFS*CFCFSV Trigger: GACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGA...TGCCGTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGGATGTCTCGGGAGGCTaGGGCTGCACTCATGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRDVSGG*GCTHVK Trigger: CTTCACATGAGTGCAGCCGCAGCCTCCCGAGACATC...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGACAGCTCCATTCACAGTaGCAGCCTTGCCGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGQLHSQ*QPCRCC Trigger: GCAGCAACGGCAAGGCTGGCACTGTGAATGGAGCTG...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGTTGGCGGGTCTTCACTaGAGACTTGGGGCTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKLAGLH*RLGASG Trigger: ACCGGAAGCCCCAAGTCTGCAGTGAAGACCCGCCAA...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| 3UTR CAA 72 bp | CACCTATCACAGTCCTGGGATTCTGGGCTCCACAGCTaGTCCCTGCTAATGGAGAGGTGGCCACATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLSQSWDSGLHS*SLLMERWPHPL Trigger: CAGAGGATGTGGCCACCTCTCCATTAGCAGGGACAAGCTGTGGAGCCCAGAATCCCAGGACTGTGATAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGTTCAGCTGGTGCTTCTaGTTCTCCGTCAAGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRFSWCF*FSVKSA Trigger: GGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAA...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGGCCGCAGGGTGCTTTTaGAGACCTGACGAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRAAGCF*RPDEQF Trigger: AAATTGCTCGTCAGGTCTGCAAAAGCACCCTGCGGC...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGACTGATGAGACTGTGTaGCGTAGCAGCTCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSETDETV*RSSSRR Trigger: CCTGCGAGAGCTGCTACGCCACACAGTCTCATCAGT...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGACTGATGAGACTGTGTaGCGTAGCAGCTCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRTDETV*RSSSRR Trigger: CCTGCGAGAGCTGCTACGCCACACAGTCTCATCAGT...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGACTGATGAGACTGTGTaGCGTAGCAGCTCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKTDETV*RSSSRR Trigger: CCTGCGAGAGCTGCTACGCCACACAGTCTCATCAGT...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGTCTTCACTGCAGACTTaGGGCTTCCGGTGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSESSLQT*GFRCSG Trigger: TCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGA...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGATCTTCACTGCAGACTTaGGGCTTCCGGTGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGSSLQT*GFRCSG Trigger: TCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGA...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGTCTTCACTGCAGACTTaGGGCTTCCGGTGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKSSLQT*GFRCSG Trigger: TCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGA...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGACTTTGGGCCCACTCTaGTTTCACCTTTGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRTLGPL*FHLCQP Trigger: TGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGT...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAATTCAGCTGGTGCTTCTaGTTCTCCGTCAAGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAEFSWCF*FSVKSA Trigger: GGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAA...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGCCGCAGGGTGCTTTTaGAGACCTGACGAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKAAGCF*RPDEQF Trigger: AAATTGCTCGTCAGGTCTGCAAAAGCACCCTGCGGC...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGTCCCTGTGTTTCAGCTaGTGCTTCTGCTTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSESLCFS*CFCFSV Trigger: GACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGA...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGATCCCTGTGTTTCAGCTaGTGCTTCTGCTTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGSLCFS*CFCFSV Trigger: GACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGA...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGTCTGGAATGTCAGCTTaGTACTTTGGGCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRSGMSA*YFGPTL Trigger: CAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGA...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | CATTTGGTGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTATCTGGAATGTCAGCTTaGTACTTTGGGCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLVARIGLKLLVLLPPPLSGMSA*YFGPTL Trigger: CAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGA...TAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCACCAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGCTGTCGATCCGTAAGTaGGCTATTGGGGTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKLSIRK*AIGVPN Trigger: GTTTGGGACCCCAATAGCCCACTTACGGATCGACAG...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGCCTTGCCGTTGCTGCTaGAGATTTGGTTGGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRPCRCC*RFGWDL Trigger: CAAATCCCAACCAAATCTCCAGCAGCAACGGCAAGG...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTAAGAATAGCCATAATAAGCAGGAGAGGACAGAGTGGTCCCAGCCCGTCTCTTCACTGCAGACTTaGGGCTTCCGGTGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAKNSHNKQERTEWSQPVSSLQT*GFRCSG Trigger: TCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGA...GACGGGCTGGGACCACTCTGTCCTCTCCTGCTTATTATGGCTATTCTTAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGCATCCTCTTGGTAGCTaGAGTTTGCAGGCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEHPLGS*SLQAWW Trigger: CCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATG...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| 3UTR CAA 72 bp | TTCCAGCTATGGCAACTCTGCCTTGCAACAACCTGTTaGGGGGTCCCTCCCATCAGTCACCCAGCTGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FQLWQLCLATTC*GVPPISHPAAL Trigger: TAAAGCAGCTGGGTGACTGATGGGAGGGACCCCCAAACAGGTTGTTGCAAGGCAGAGTTGCCATAGCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGCTCCTTGTCAAGGTATaGCAACACGGATTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRLLVKV*QHGFCL Trigger: GAGACAGAATCCGTGTTGTCATACCTTGACAAGGAG...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGACTTTGGGCCCACTCTaGTTTCACCTTTGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSETLGPL*FHLCQP Trigger: TGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGT...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR TCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAACTTTGGGCCCACTCTaGTTTCACCTTTGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGTLGPL*FHLCQP Trigger: TGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGT...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCAAATCCAACGTGATCCACAGAATGCAGAGAAAGCCCTGGAGATCACTGTTGGCGGGTCTTCACTaGAGACTTGGGGCTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: DAKSNVIHRMQRKPWRSLLAGLH*RLGASG Trigger: ACCGGAAGCCCCAAGTCTGCAGTGAAGACCCGCCAA...CAGTGATCTCCAGGGCTTTCTCTGCATTCTGTGGATCACGTTGGATTTGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAATCCCTGTGTTTCAGCTaGTGCTTCTGCTTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAESLCFS*CFCFSV Trigger: GACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGA...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGGTCAGCTTGGTACTTTaGGCCCACTCTGATTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEVSLVL*AHSDFT Trigger: GGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGAC...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGTCTGGAATGTCAGCTTaGTACTTTGGGCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSESGMSA*YFGPTL Trigger: CAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGA...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGATCTGGAATGTCAGCTTaGTACTTTGGGCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGSGMSA*YFGPTL Trigger: CAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGA...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAAACAGCAGCAGGAACACTGGCTAAATACAGATTCCCCTCCGAACTAGGCCTGTCGATCCGTAAGTaGGCTATTGGGGTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQTAAGTLAKYRFPSELGLSIRK*AIGVPN Trigger: GTTTGGGACCCCAATAGCCCACTTACGGATCGACAG...GCCTAGTTCGGAGGGGAATCTGTATTTAGCCAGTGTTCCTGCTGCTGTTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAGAATAGCCATAATAAGCAGGAGAGGACAGAGTGGTCCCAGCCCGTCAACTGATGAGACTGTGTaGCGTAGCAGCTCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELRIAIISRRGQSGPSPSTDETV*RSSSRR Trigger: CCTGCGAGAGCTGCTACGCCACACAGTCTCATCAGT...TGACGGGCTGGGACCACTCTGTCCTCTCCTGCTTATTATGGCTATTCTTAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | ATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACTTCTCTTCGTCTGACTaGGTAGGCATTTTCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: IGLKLLVLLPPPLQCQGYFSSSD*VGIFRP Trigger: AGGTCTGAAAATGCCTACCCAGTCAGACGAAGAGAA...GTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | GCCCAAACAGCAGCAGGAACACTGGCTAAATACAGATTCCCCTCCGAACTAGGCCATCCTCTTGGTAGCTaGAGTTTGCAGGCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQTAAGTLAKYRFPSELGHPLGS*SLQAWW Trigger: CCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATG...GCCTAGTTCGGAGGGGAATCTGTATTTAGCCAGTGTTCCTGCTGCTGTTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CAA 72 bp | TGTTTGACTACTCAGAAGTACTTGAAGCCCGTGGACTaGGAGACTCTGCCCTCTGATCAACCGGCGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CLTTQKYLKPVD*ETLPSDQPAPQ Trigger: TTGTGGCGCCGGTTGATCAGAGGGCAGAGTCTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTAGTCAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGCTCCTTGTCAAGGTATaGCAACACGGATTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSELLVKV*QHGFCL Trigger: GAGACAGAATCCGTGTTGTCATACCTTGACAAGGAG...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGAGGGTCGTATACCAGTaGGTAGAAGAAGGTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSERVVYQ*VEEGIL Trigger: GAGGATACCTTCTTCTACTCACTGGTATACGACCCT...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR TCA 90 bp | ATTTATTACTGTGGCGTTTGGGGTCCAAATGGTGAGATAATTCAATTCCGCCTGAGGGCGCTCTGGGGCTaGAACTGGGTCCCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYYCGVWGPNGEIIQFRLRALWG*NWVPTA Trigger: AGCTGTGGGGACCCAGTTTCAGCCCCAGAGCGCCCT...CAGGCGGAATTGAATTATCTCACCATTTGGACCCCAAACGCCACAGTAATAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR TCA 90 bp | TGGTGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGTGCTTTTGCAGACCTaGCGAGCAATTTTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WWPESALNSWSSCLRLYSVLLQT*RAIFVK Trigger: TTTCACAAAAATTGCTCGTCAGGTCTGCAAAAGCAC...ACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGTTCCACATTGCCACTTaGAGTCTTGTTGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRFHIAT*SLVELL Trigger: GAGGAGCTCAACAAGACTGCAAGTGGCAATGTGGAA...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ATCACCCAGGCAATTCCTTTCATGATATGTAGCCCTCTCGGGCAATTAAAAACAGCCTCACGGAGCTGCTaGAGTCCAGGGCTCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITQAIPFMICSPLGQLKTASRSC*SPGLGQ Trigger: TTGCCCGAGCCCTGGACTGCAGCAGCTCCGTGAGGC...TGTTTTTAATTGCCCGAGAGGGCTACATATCATGAAAGGAATTGCCTGGGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGTTCGGCATGTCTGTCTaGATATTCTGCCCTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEFGMSV*IFCPNG Trigger: GCCATTAGGGCAGAATATGCAGACAGACATGCCGAA...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | GAGCTAAGAATAGCCATAATAAGCAGGAGAGGACAGAGTGGTCCCAGCCCGTCATTGGTAGCTGGAGTTTaGAGGCTTGGTGGAGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ELRIAIISRRGQSGPSPSLVAGV*RLGGDR Trigger: TCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAA...TGACGGGCTGGGACCACTCTGTCCTCTCCTGCTTATTATGGCTATTCTTAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | ATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACTGCTGGAGATTTGGTTaGGATTTGGTTTGTAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IGLKLLVLLPPPLQCQGYCWRFG*DLVCKS Trigger: CGACTTACAAACCAAATCCCAACCAAATCTCCAGCA...GTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGTTCTCTTCGTCTGACTaGGTAGGCATTTTCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRFSSSD*VGIFRP Trigger: AGGTCTGAAAATGCCTACCCAGTCAGACGAAGAGAA...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAACTCCTTGTCAAGGTATaGCAACACGGATTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAELLVKV*QHGFCL Trigger: GAGACAGAATCCGTGTTGTCATACCTTGACAAGGAG...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACTCTGTCTGCATATTCTaGCCTAATGGCAGCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: IGLKLLVLLPPPLQCQGYSVCIF*PNGSII Trigger: AATTATGCTGCCATTAGGGCAGAATATGCAGACAGA...GTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | CGTGATCCACAGAATGCAGAGAAAGCCCTGGAGATCACTGAGGGTTCGACACGATTCGGCATGTCTGTCTaGATATTCTGCCCTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDPQNAEKALEITEGSTRFGMSV*IFCPNG Trigger: GCCATTAGGGCAGAATATGCAGACAGACATGCCGAA...TCGTGTCGAACCCTCAGTGATCTCCAGGGCTTTCTCTGCATTCTGTGGATCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGTTCTCTTCGTCTGACTaGGTAGGCATTTTCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRFSSSD*VGIFRP Trigger: AGGTCTGAAAATGCCTACCCAGTCAGACGAAGAGAA...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGACGACAAAGGTTTCCTaGTGCTTCTGCTTTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSETTKVS*CFCFSV Trigger: CACTGAAAAGCAGAAGCACCAGGAAACCTTTGTCGT...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| 3UTR CAA 72 bp | ATTCGGAGCGGCGAGCATCCTCTTGGTAGCTGGAGTTaGCAGGCTTGGTGGAGACCGAATTACATTAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IRSGEHPLGSWS*QAWWRPNYIRF Trigger: AAACCTAATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAGAGGATGCTCGCCGCTCCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| CDS-3UTR TCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGCGCTCTGGGGCTaGAACTGGGTCCCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCRALWG*NWVPTA Trigger: AGCTGTGGGGACCCAGTTTCAGCCCCAGAGCGCCCT...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGGTGCTTTTGCAGACCTaGCGAGCAATTTTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEVLLQT*RAIFVK Trigger: TTTCACAAAAATTGCTCGTCAGGTCTGCAAAAGCAC...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR TCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGGTGCTTTTGCAGACCTaGCGAGCAATTTTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRVLLQT*RAIFVK Trigger: TTTCACAAAAATTGCTCGTCAGGTCTGCAAAAGCAC...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGTCAGTTTCTTTAGCATaGTTGTCGGCGAGCATGATA | + |
|
Preference number: 4 (lower is better) Translates to: TNKKRERGRERMARSGTRSVSLA*LSASMI Trigger: TATCATGCTCGCCGACAAGCATGCTAAAGAAACTGA...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTCACGGAGCTGCTaGAGTCCAGGGCTCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCASRSC*SPGLGQ Trigger: TTGCCCGAGCCCTGGACTGCAGCAGCTCCGTGAGGC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | AACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATCCAGCCGCAGCCGCAGGGTaGTTTTGCAGACCTGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: NMDMMKEVRDRCQIQRDPAAAAG*FCRPDE Trigger: CTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGC...TGGATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | AAAAACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATAAACGGCCGTCTCGCTaGCTGCCGCAGCCGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNMDMMKEVRDRCQIQRDKRPSR*LPQPQG Trigger: ACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGTTT...ATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGTTGGGATTTGGTTTaGTGTAAGTCGGGATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAEGWDLV*CKSGCT Trigger: TGTACATCCCGACTTACAGCAAACCAAATCCCAACC...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112349.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKRESEGERGWQGAERGRATTKN*SICRSV Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...CCTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGTGCTGGAGATTTGGTTaGGATTTGGTTTGTAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSECWRFG*DLVCKS Trigger: CGACTTACAAACCAAATCCCAACCAAATCTCCAGCA...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGATGCTGGAGATTTGGTTaGGATTTGGTTTGTAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTKRESEGERGWQGAERGCWRFG*DLVCKS Trigger: CGACTTACAAACCAAATCCCAACCAAATCTCCAGCA...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGATTTGGTTGGGATTTaGTTTGCTGTAAGTCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKDLVGI*FAVSRD Trigger: ATCCCGACTTACAGCAAACCAAATCCCAACCAAATC...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112349.9 |
||
| CDS-3UTR TCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGTGCTTTTGCAGACCTaGCGAGCAATTTTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAEVLLQT*RAIFVK Trigger: TTTCACAAAAATTGCTCGTCAGGTCTGCAAAAGCAC...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCCATCTCGTCCCTaGAGAGGACTGGCCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCPPSRP*RGLALR Trigger: TCGGAGGGCCAGTCCTCTGCAGGGACGAGATGGAGG...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | GCCCAAACAGCAGCAGGAACACTGGCTAAATACAGATTCCCCTCCGAACTAGGCTTCTTTTCCCCAGAATaGTCAGAGATGTGTGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: AQTAAGTLAKYRFPSELGFFSPE*SEMCDS Trigger: CGAATCACACATCTCTGAGCATTCTGGGGAAAAGAA...GCCTAGTTCGGAGGGGAATCTGTATTTAGCCAGTGTTCCTGCTGCTGTTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKKRERGRERMARSGTRKATTKN*SICRSV Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGGATTTGGTTGGGATTTaGTTTGTAAGTCGGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEDLVGI*FVSRDV Trigger: TACATCCCGACTTACAAACCAAATCCCAACCAAATC...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| 3UTR CAA 72 bp | ATGAGCTCATGTAGCCCAGGTTATCTTCAAACTCATTaGGTGGCCAGAATCGGCCTTAAACTCCTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSSCSPGYLQTH*VARIGLKLLVL Trigger: GAGGACCAGGAGTTTAAGGCCGATTCTGGCCACCAAATGAGTTTGAAGATAACCTGGGCTACATGAGCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR TCA 90 bp | GGAGCTAAGAATAGCCATAATAAGCAGGAGAGGACAGAGTGGTCCCAGCCCGTCTCTCTAAATACCCAATaGTACACGACAAAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAKNSHNKQERTEWSQPVSLNTQ*YTTKVS Trigger: GGAAACCTTTGTCGTGTATCATTGGGTATTTAGAGA...GACGGGCTGGGACCACTCTGTCCTCTCCTGCTTATTATGGCTATTCTTAGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | GTTAAATTGAGAAGTGAGCCCAAACAGCAGCAGGAACACTGGCTAAATACAGATTTCAGCTGGTGCTTCTaGTTCTCCGTCAAGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKLRSEPKQQQEHWLNTDFSWCF*FSVKSA Trigger: GGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAA...ATCTGTATTTAGCCAGTGTTCCTGCTGCTGTTTGGGCTCACTTCTCAATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGATTTGGTTGGGATTTaGTTTGTAAGTCGGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KQKERAREREDGKERNAEDLVGI*FVSRDV Trigger: TACATCCCGACTTACAAACCAAATCCCAACCAAATC...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112350.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAAAGTTAAATTGAGAAGTGAGCCCAAACAGCAGCAGGAACACTGGCTACTCCTTGTCAAGGTATaGCAACACGGATTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARKVKLRSEPKQQQEHWLLLVKV*QHGFCL Trigger: GAGACAGAATCCGTGTTGTCATACCTTGACAAGGAG...TAGCCAGTGTTCCTGCTGCTGTTTGGGCTCACTTCTCAATTTAACTTTCCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTCTCGGGAGGCTaGGGCTGCACTCATGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCDVSGG*GCTHVK Trigger: CTTCACATGAGTGCAGCCGCAGCCTCCCGAGACATC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGCTCCATTCACAGTaGCAGCCTTGCCGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCQLHSQ*QPCRCC Trigger: GCAGCAACGGCAAGGCTGGCACTGTGAATGGAGCTG...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGGCGGGTCTTCACTaGAGACTTGGGGCTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCLAGLH*RLGASG Trigger: ACCGGAAGCCCCAAGTCTGCAGTGAAGACCCGCCAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCAGCTGGTGCTTCTaGTTCTCCGTCAAGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCFSWCF*FSVKSA Trigger: GGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | ATTTATTACTGTGGCGTTTGGGGTCCAAATGGTGAGATAATTCAATTCCGCCTGGTTTCCTGGTGCTTCTaGTTTTCAGTGGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYYCGVWGPNGEIIQFRLVSWCF*FSVGFQ Trigger: CTGGAAGCCCACTGAAAAGCAGAAGCACCAGGAAAC...CAGGCGGAATTGAATTATCTCACCATTTGGACCCCAAACGCCACAGTAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | ATCACCCAGGCAATTCCTTTCATGATATGTAGCCCTCTCGGGCAATTAAAAACACCTTGCCGTTGCTGCTaGAGATTTGGTTGGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITQAIPFMICSPLGQLKTPCRCC*RFGWDL Trigger: CAAATCCCAACCAAATCTCCAGCAGCAACGGCAAGG...TGTTTTTAATTGCCCGAGAGGGCTACATATCATGAAAGGAATTGCCTGGGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CAA 72 bp | CAAAATGTTCCCTATTGTTTGACTACTCAGAAGTACTaGAAGCCCGTGGACTTGGAGACTCTGCCCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNVPYCLTTQKY*KPVDLETLPSD Trigger: ATCAGAGGGCAGAGTCTCCAAGTCCACGGGCTTCAAGTACTTCTGAGTAGTCAAACAATAGGGAACATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGCAGGGTGCTTTTaGAGACCTGACGAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCAAGCF*RPDEQF Trigger: AAATTGCTCGTCAGGTCTGCAAAAGCACCCTGCGGC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGGTAGCTGGAGTTTaGAGGCTTGGTGGAGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCLVAGV*RLGGDR Trigger: TCGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCGATCCGTAAGTaGGCTATTGGGGTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCLSIRK*AIGVPN Trigger: GTTTGGGACCCCAATAGCCCACTTACGGATCGACAG...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAAAGTTAAATTGAGAAGTGAGCCCAAACAGCAGCAGGAACACTGGCTAGGTTTCTTTGCGGGATaGATCTCTAAATACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ARKVKLRSEPKQQQEHWLGFFAG*ISKYPM Trigger: CATTGGGTATTTAGAGATCCATCCCGCAAAGAAACC...TAGCCAGTGTTCCTGCTGCTGTTTGGGCTCACTTCTCAATTTAACTTTCCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| 3UTR CAA 72 bp | TCAGCTTGGTACTTTGGGCCCACTCTGATTTCACCTTaGTCAGCCAATAATGTTTTCACTGAAGGGTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SAWYFGPTLISP*SANNVFTEGSY Trigger: ATACGACCCTTCAGTGAAAACATTATTGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177069.8 |
||
| CDS-3UTR GCA 90 bp | AACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATCCATTCCACATTGCCACTTaGAGTCTTGTTGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NMDMMKEVRDRCQIQRDPFHIAT*SLVELL Trigger: GAGGAGCTCAACAAGACTGCAAGTGGCAATGTGGAA...TGGATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCCTGGTGCTTCTaGTTTTCAGTGGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCVSWCF*FSVGFQ Trigger: CTGGAAGCCCACTGAAAAGCAGAAGCACCAGGAAAC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTGCCGTTGCTGCTaGAGATTTGGTTGGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCPCRCC*RFGWDL Trigger: CAAATCCCAACCAAATCTCCAGCAGCAACGGCAAGG...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | ATCACCCAGGCAATTCCTTTCATGATATGTAGCCCTCTCGGGCAATTAAAAACAACGACAAAGGTTTCCTaGTGCTTCTGCTTTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITQAIPFMICSPLGQLKTTTKVS*CFCFSV Trigger: CACTGAAAAGCAGAAGCACCAGGAAACCTTTGTCGT...TGTTTTTAATTGCCCGAGAGGGCTACATATCATGAAAGGAATTGCCTGGGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR TCA 90 bp | AAAAACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATACTTTGGGCCCACTCTaGTTTCACCTTTGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNMDMMKEVRDRCQIQRDTLGPL*FHLCQP Trigger: TGGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGT...ATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCCACATTGCCACTTaGAGTCTTGTTGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCFHIAT*SLVELL Trigger: GAGGAGCTCAACAAGACTGCAAGTGGCAATGTGGAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | ATCACCCAGGCAATTCCTTTCATGATATGTAGCCCTCTCGGGCAATTAAAAACAGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ITQAIPFMICSPLGQLKTATTKN*SICRSV Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...TGTTTTTAATTGCCCGAGAGGGCTACATATCATGAAAGGAATTGCCTGGGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTCTTCGTCTGACTaGGTAGGCATTTTCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCFSSSD*VGIFRP Trigger: AGGTCTGAAAATGCCTACCCAGTCAGACGAAGAGAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGTTTGCAGGCTTaGTGGAGACCGAATTACATT | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCWSLQA*WRPNYI Trigger: AATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGTTTCTTTAGCATaGTTGTCGGCGAGCATGATA | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCSVSLA*LSASMI Trigger: TATCATGCTCGCCGACAAGCATGCTAAAGAAACTGA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTTTCCCCAGAATaGTCAGAGATGTGTGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCFFSPE*SEMCDS Trigger: CGAATCACACATCTCTGAGCATTCTGGGGAAAAGAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | AACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATCCAGATTTGGTTGGGATTTaGTTTGTAAGTCGGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: NMDMMKEVRDRCQIQRDPDLVGI*FVSRDV Trigger: TACATCCCGACTTACAAACCAAATCCCAACCAAATC...TGGATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTTCTTTGCGGGATaGATCTCTAAATACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCGFFAG*ISKYPM Trigger: CATTGGGTATTTAGAGATCCATCCCGCAAAGAAACC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | AAAAACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATTGGAGTTTGCAGGCTTaGTGGAGACCGAATTACATT | + |
|
Preference number: 4 (lower is better) Translates to: KNMDMMKEVRDRCQIQRDWSLQA*WRPNYI Trigger: AATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCA...ATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR TCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTCTAAATACCCAATaGTACACGACAAAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCSLNTQ*YTTKVS Trigger: GGAAACCTTTGTCGTGTATCATTGGGTATTTAGAGA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR GCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTCTGCATATTCTaGCCTAATGGCAGCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCSVCIF*PNGSII Trigger: AATTATGCTGCCATTAGGGCAGAATATGCAGACAGA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CCA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: YILLICVCVCVCVCVCVCATTKN*SICRSV Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACGGCATGAGCCAGTCTTCACTGCAGACTaGGGGCTTCCGGTGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TPGPPASASTVPGLRHEPVFTAD*GLPVFR Trigger: CCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGAC...TGGCTCATGCCGTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCCTTGGTAGCTGGAGTTaGCAGGCTTGGTGGAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: WPESALNSWSSCLRLYSALGSWS*QAWWRP Trigger: CGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAG...GGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | ATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCAGGGTTACGCGGCGAGCATCCTCTaGGTAGCTGGAGTTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IGLKLLVLLPPPLQCQGYAASIL*VAGVCR Trigger: CCTGCAAACTCCAGCTACCAAGAGGATGCTCGCCGC...GTAACCCTGGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | CATTTGGTGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTAGTGCCAGCCTTGCCGTaGCTGCTGGAGATTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLVARIGLKLLVLLPPPLVPALP*LLEIWL Trigger: CAACCAAATCTCCAGCAGCAACGGCAAGGCTGGCAC...TAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCACCAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAGTCTTCACTGCAGACTaGGGGCTTCCGGTGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QTKRESEGERGWQGAERGVFTAD*GLPVFR Trigger: CCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGAC...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGGTCTTCACTGCAGACTaGGGGCTTCCGGTGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRVFTAD*GLPVFR Trigger: CCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGAC...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGGTGCCAGCCTTGCCGTaGCTGCTGGAGATTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NKKRERGRERMARSGTRKVPALP*LLEIWL Trigger: CAACCAAATCTCCAGCAGCAACGGCAAGGCTGGCAC...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGGTGCCAGCCTTGCCGTaGCTGCTGGAGATTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRVPALP*LLEIWL Trigger: CAACCAAATCTCCAGCAGCAACGGCAAGGCTGGCAC...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTGCCCTGGAGTTTGCAGGCTaGGTGGAGACCGAATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: WPESALNSWSSCLRLYSALEFAG*VETELH Trigger: ATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCAG...GGCACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | TGGTGGCCAGAATCGGCCTTAAACTCCTGGTCCTCCTGCCTCCGCCTCTACAGTTCCGTAAGTGGGCTATaGGGGTCCCAAACCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: WWPESALNSWSSCLRLYSSVSGL*GSQTLT Trigger: AGTTAAGGTTTGGGACCCCAATAGCCCACTTACGGA...ACTGTAGAGGCGGAGGCAGGAGGACCAGGAGTTTAAGGCCGATTCTGGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGATTCACAGTGCCAGCCTaGCCGTTGCTGCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: QTKRESEGERGWQGAERGFTVPA*PLLLEI Trigger: AATCTCCAGCAGCAACGGCAAGGCTGGCACTGTGAA...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGTTCACAGTGCCAGCCTaGCCGTTGCTGCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: NKKRERGRERMARSGTRKFTVPA*PLLLEI Trigger: AATCTCCAGCAGCAACGGCAAGGCTGGCACTGTGAA...CTTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGCCACTTGCAGTCTTGTaGAGCTCCTCTATCCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEPLAVL*SSSIRL Trigger: CAGACGGATAGAGGAGCTCAACAAGACTGCAAGTGG...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGCCACTTGCAGTCTTGTaGAGCTCCTCTATCCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRPLAVL*SSSIRL Trigger: CAGACGGATAGAGGAGCTCAACAAGACTGCAAGTGG...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGTACACTTGTTTCAGTTaGCTCTCGGCTTCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRYTCFS*LSASAA Trigger: GGCCGCAGAAGCCGAGAGCAAACTGAAACAAGTGTA...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGTTGCCACTTGCAGTCTaGTTGAGCTCCTCTATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRLPLAV*LSSSIR Trigger: ACGGATAGAGGAGCTCAACAAGACTGCAAGTGGCAA...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGTCCGTAAGTGGGCTATaGGGGTCCCAAACCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRSVSGL*GSQTLT Trigger: AGTTAAGGTTTGGGACCCCAATAGCCCACTTACGGA...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAATACACTTGTTTCAGTTaGCTCTCGGCTTCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQKERAREREDGKERNAEYTCFS*LSASAA Trigger: GGCCGCAGAAGCCGAGAGCAAACTGAAACAAGTGTA...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGAAGAAGGTATCCTCCTaGTCAAGGTATGACAACACG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCRHVRTTVHVWRSEKKVSS*SRYDNT Trigger: CGTGTTGTCATACCTTGACAAGGAGGATACCTTCTT...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGAAGGTATCCTCCTaGTCAAGGTATGACAACACG | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRKKVSS*SRYDNT Trigger: CGTGTTGTCATACCTTGACAAGGAGGATACCTTCTT...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGATTTGGTTGGGATTaGGTTTGCTGTAAGTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QTKRESEGERGWQGAERGRFGWD*VCCKSG Trigger: TCCCGACTTACAGCAAACCAAATCCCAACCAAATCT...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112349.9 |
||
| CDS CCA 90 bp | CCCAATGATACACGACAAAGGTTTCCTGGTGCTTCTGCTTTTCAGTaGGCTTCCAGAAAGTTCGGCATGTCTGTCTGCATCGTAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PNDTRQRFPGASAFQ*ASRKFGMSVCIVAA Trigger: AGCTGCTACGATGCAGACAGACATGCCGAACTTTCTGGAAGCCCACTGAAAAGCAGAAGCACCAGGAAACCTTTGTCGTGTATCATTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176816.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAAAGAAGGTATCCTCCTaGTCAAGGTATGACAACACG | + |
|
Preference number: 5 (lower is better) Translates to: KQKERAREREDGKERNAEKKVSS*SRYDNT Trigger: CGTGTTGTCATACCTTGACAAGGAGGATACCTTCTT...TTCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAAGATTTGGTTGGGATTaGGTTTGTAAGTCGGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: QTKRESEGERGWQGAERGRFGWD*VCKSGC Trigger: ACATCCCGACTTACAAACCAAATCCCAACCAAATCT...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTAGGCATGTGCGTACCACAGTGCACGTGTGGAGGTCAGAGACTCTGATTTCACCTTaGTCAGCCAATAATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCRHVRTTVHVWRSETLISP*SANNVF Trigger: GAAAACATTATTGGCTGACAAAGGTGAAATCAGAGT...CTCTGACCTCCACACGTGCACTGTGGTACGCACATGCCTACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGACTCTGATTTCACCTTaGTCAGCCAATAATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNKKRERGRERMARSGTRTLISP*SANNVF Trigger: GAAAACATTATTGGCTGACAAAGGTGAAATCAGAGT...CCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAAAAAGAGAGAGCGAGGGAGAGAGAGGATGGCAAGGAGCGGAACGCGGAACTCTGATTTCACCTTaGTCAGCCAATAATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTKRESEGERGWQGAERGTLISP*SANNVF Trigger: GAAAACATTATTGGCTGACAAAGGTGAAATCAGAGT...TCCGCGTTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112349.9 ENSMUST00000112350.8 |
||
| CDS-3UTR CAA 90 bp | GTTAAATTGAGAAGTGAGCCCAAACAGCAGCAGGAACACTGGCTAAATACAGATTTCACAGTGCCAGCCTaGCCGTTGCTGCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: VKLRSEPKQQQEHWLNTDFTVPA*PLLLEI Trigger: AATCTCCAGCAGCAACGGCAAGGCTGGCACTGTGAA...ATCTGTATTTAGCCAGTGTTCCTGCTGCTGTTTGGGCTCACTTCTCAATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTCACTGCAGACTaGGGGCTTCCGGTGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCVFTAD*GLPVFR Trigger: CCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGAC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGGCGAGCATCCTCTaGGTAGCTGGAGTTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCAASIL*VAGVCR Trigger: CCTGCAAACTCCAGCTACCAAGAGGATGCTCGCCGC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | CGTGATCCACAGAATGCAGAGAAAGCCCTGGAGATCACTGAGGGTTCGACACGAACTCTGATTTCACCTTaGTCAGCCAATAATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RDPQNAEKALEITEGSTRTLISP*SANNVF Trigger: GAAAACATTATTGGCTGACAAAGGTGAAATCAGAGT...TCGTGTCGAACCCTCAGTGATCTCCAGGGCTTTCTCTGCATTCTGTGGATCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | GTTAAATTGAGAAGTGAGCCCAAACAGCAGCAGGAACACTGGCTAAATACAGATTACACTTGTTTCAGTTaGCTCTCGGCTTCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VKLRSEPKQQQEHWLNTDYTCFS*LSASAA Trigger: GGCCGCAGAAGCCGAGAGCAAACTGAAACAAGTGTA...ATCTGTATTTAGCCAGTGTTCCTGCTGCTGTTTGGGCTCACTTCTCAATTTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCAGCCTTGCCGTaGCTGCTGGAGATTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCVPALP*LLEIWL Trigger: CAACCAAATCTCCAGCAGCAACGGCAAGGCTGGCAC...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTGGTAGCTGGAGTTaGCAGGCTTGGTGGAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCLGSWS*QAWWRP Trigger: CGGTCTCCACCAAGCCTGCAAACTCCAGCTACCAAG...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | GCAAGGAAAGTTAAATTGAGAAGTGAGCCCAAACAGCAGCAGGAACACTGGCTAAAGAAGGTATCCTCCTaGTCAAGGTATGACAACACG | + |
|
Preference number: 5 (lower is better) Translates to: ARKVKLRSEPKQQQEHWLKKVSS*SRYDNT Trigger: CGTGTTGTCATACCTTGACAAGGAGGATACCTTCTT...TAGCCAGTGTTCCTGCTGCTGTTTGGGCTCACTTCTCAATTTAACTTTCCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCACAGTGCCAGCCTaGCCGTTGCTGCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCFTVPA*PLLLEI Trigger: AATCTCCAGCAGCAACGGCAAGGCTGGCACTGTGAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACACTTGTTTCAGTTaGCTCTCGGCTTCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCYTCFS*LSASAA Trigger: GGCCGCAGAAGCCGAGAGCAAACTGAAACAAGTGTA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | AAAAACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATCCACTTGCAGTCTTGTaGAGCTCCTCTATCCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNMDMMKEVRDRCQIQRDPLAVL*SSSIRL Trigger: CAGACGGATAGAGGAGCTCAACAAGACTGCAAGTGG...ATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCCACTTGCAGTCTaGTTGAGCTCCTCTATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCLPLAV*LSSSIR Trigger: ACGGATAGAGGAGCTCAACAAGACTGCAAGTGGCAA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCGTAAGTGGGCTATaGGGGTCCCAAACCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCSVSGL*GSQTLT Trigger: AGTTAAGGTTTGGGACCCCAATAGCCCACTTACGGA...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGGAGTTTGCAGGCTaGGTGGAGACCGAATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCLEFAG*VETELH Trigger: ATGTAATTCGGTCTCCACCAAGCCTGCAAACTCCAG...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS-3UTR CAA 90 bp | AACATGGATATGATGAAAGAAGTTAGGGACAGATGCCAAATCCAACGTGATCCAAGATTTGGTTGGGATTaGGTTTGTAAGTCGGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: NMDMMKEVRDRCQIQRDPRFGWD*VCKSGC Trigger: ACATCCCGACTTACAAACCAAATCCCAACCAAATCT...TGGATCACGTTGGATTTGGCATCTGTCCCTAACTTCTTTCATCATATCCATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112352.10 |
||
| CDS-3UTR CAA 90 bp | TACATTTTATTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGATTTGGTTGGGATTaGGTTTGTAAGTCGGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: YILLICVCVCVCVCVCVCRFGWD*VCKSGC Trigger: ACATCCCGACTTACAAACCAAATCCCAACCAAATCT...ACACACACACACACACACACACACACACACACACACACAGATTAATAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS CCA 72 bp | CTGGTGCTTCTGCTTCTCCGTCAAGTCGGCCTCAACTaGCGTCTCCGACTCCTCCTCAGTTTCTTTAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LVLLLLRQVGLN*RLRLLLSFFSM Trigger: CATGCTAAAGAAACTGAGGAGGAGTCGGAGACGCCAGTTGAGGCCGACTTGACGGAGAAGCAGAAGCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067826.15 ENSMUST00000112349.9 ENSMUST00000112350.8 ENSMUST00000112352.10 |
||
| CDS CAA 72 bp | GGCGTCTCCGACTCCTCCTCAGTTTCTTTAGCATGCTaGTCGGCGAGCATGATAAGCGTGTTGGAGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVSDSSSVSLAC*SASMISVLEMS Trigger: GGACATCTCCAACACGCTTATCATGCTCGCCGACAAGCATGCTAAAGAAACTGAGGAGGAGTCGGAGACGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067826.15 ENSMUST00000112349.9 ENSMUST00000112350.8 ENSMUST00000112352.10 |
||
| CDS GCA 72 bp | ACTGGCGTCTCCGACTCCTCCTCAGTTTCTTTAGCATaGTTGTCGGCGAGCATGATAAGCGTGTTGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TGVSDSSSVSLA*LSASMISVLEM Trigger: CATCTCCAACACGCTTATCATGCTCGCCGACAAGCATGCTAAAGAAACTGAGGAGGAGTCGGAGACGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067826.15 ENSMUST00000112349.9 ENSMUST00000112350.8 ENSMUST00000112352.10 |
||
| CDS CCA 72 bp | TCTGAGTCTTCTGGTAGCATGTCTGGAATGTCAGCTTaGTACTTTGGGCCCACTCTGATTTCACCTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SESSGSMSGMSA*YFGPTLISPLS Trigger: TGACAAAGGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGACATGCTACCAGAAGACTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067826.15 |
||
| CDS TCA 72 bp | CTTTCTGTGTCGGGCGATACCTACCTAAATACCCAATaGTACACGACAAAGGTTTCCTGGTGCTTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSVSGDTYLNTQ*YTTKVSWCFCF Trigger: AAAGCAGAAGCACCAGGAAACCTTTGTCGTGTATCATTGGGTATTTAGGTAGGTATCGCCCGACACAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176816.8 |
||