Pregenerated sensors for MTA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071646Ensembl transcript IDs: ENSMUST00000096240.3
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTAAGATTTGTATGTCCTaGGCACCCACCCCTCTACCT | + |
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Preference number: 2 (lower is better) Translates to: CPTPARTHTHQGQPSLTPKICMS*APTPLP Trigger: AGGTAGAGGGGTGGGTGCCCAGGACATACAAATCTT...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| 3UTR CAA 90 bp | CCTCCCTCACTCCTTACTCCCTTTGATACCAAAAGGAATGAAGATTaGTATGTCCTGGGCACCCACCCCTCTACCTCTCATCCCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: PPSLLTPFDTKRNED*YVLGTHPSTSHPTS Trigger: GGAGGTGGGATGAGAGGTAGAGGGGTGGGTGCCCAGGACATACAAATCTTCATTCCTTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| 3UTR CAA 90 bp | GACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTaGATACCAAAAGGAATGAAGATTTGTATGTCCTGGGCACCCACC | + |
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Preference number: 2 (lower is better) Translates to: DTHTPGSTLPHSLLP*IPKGMKICMSWAPT Trigger: GGTGGGTGCCCAGGACATACAAATCTTCATTCCTTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCCTCCTCAGTTCCTATAGGCTGTaGAGCCCAAAAAGGGACGTT | + |
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Preference number: 2 (lower is better) Translates to: LPFPCQGLTPDMFTLPLLSSYRL*SPKRDV Trigger: AACGTCCCTTTTTGGGCTTCACAGCCTATAGGAACT...GAGGAGGGGAAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| 3UTR CCA 72 bp | CCTTTGATACCAAAAGGAATGAAGATTTGTATGTCCTaGGCACCCACCCCTCTACCTCTCATCCCACCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PLIPKGMKICMS*APTPLPLIPPP Trigger: GGGAGGTGGGATGAGAGGTAGAGGGGTGGGTGCCCAGGACATACAAATCTTCATTCCTTTTGGTATCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| 3UTR-3UTR CAA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAAAAGGAATGAAGATTaGTATGTCCTGGGCACCCAC | + |
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Preference number: 3 (lower is better) Translates to: RYWQLQAVTNTRGCPTPAKRNED*YVLGTH Trigger: GTGGGTGCCCAGGACATACAAATCTTCATTCCTTTT...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACCACTCCTTACTCCCTTaGATACCAAAAGGAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: QLQAVTNTRGCPTPARTHHSLLP*IPKGMK Trigger: CTTCATTCCTTTTGGTATCAAAGGGAGTAAGGAGTG...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | ACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCAATCTGCCGGTCTGTaGGAGGGTTGTCTGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TPEGVQPLQGHTHTRVNPQSAGL*EGCLGP Trigger: GGGACCCAGACAACCCTCTCACAGACCGGCAGATTG...AGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTAGTGTGGCTCTGTGGTaGCCCGAGCAGCCCCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPSVALW*PEQPLQ Trigger: TTGAAGGGGCTGCTCGGGGCACCACAGAGCCACACT...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTCCCCAGGCATACCACTaGGCAGACTGTGTGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPPQAYH*ADCVVW Trigger: CCACACCACACAGTCTGCCCAGTGGTATGCCTGGGG...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTGCCGAATTGAGCTGCTaGAGTCTAGGGCTCTCGCGA | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPAELSC*SLGLSR Trigger: TCGCGAGAGCCCTAGACTGCAGCAGCTCAATTCGGC...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCAGAGGCCTTCCATTaGCAGAGAAGGGGACCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTPEAFH*QRRGPL Trigger: CAGGGGTCCCCTTCTCTGCCAATGGAAGGCCTCTGG...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTGACCCCTGGCTGTTTTaGTTCCTCCTCAAACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPDPWLF*FLLKLP Trigger: CGGGAGTTTGAGGAGGAATCAAAACAGCCAGGGGTC...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | ACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTGCAGGGTTTAGTTTCTaGCGCTTGGCTGCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TPEGVQPLQGHTHTRVNPAGFSF*RLAAGC Trigger: ACAGCCAGCAGCCAAGCGTCAGAAACTAAACCCTGC...AGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACGCTGCCGAATTGAGCTaGTGCAGTCTAGGGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNAAELS*CSLGLS Trigger: CGAGAGCCCTAGACTGCAGCAGCTCAATTCGGCAGC...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTATGTGCAAGCTTGGCTaGCGAATTGAGCTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPMCKLG*RIELLQ Trigger: CTGCAGCAGCTCAATTCGGCAGCCAAGCTTGCACAT...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTGCAGACTGTGTGGTGTaGCAGCTCTCACAAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTADCVV*QLSQVR Trigger: CCTGACTTGTGAGAGCTGCCACACCACACAGTCTGC...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | ACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAATCTCGGTGCTTCAGTTaGTGTCTCTGCTGCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TNTRGCPTPARTHTHQGQSRCFS*CLCCSE Trigger: CTCCGAGCAGCAGAGACATCAACTGAAGCACCGAGA...TTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAGCAGCCCCTTCAAGTTaGGTAGGGGTCTTCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RYWQLQAVTNTRGCPTPAAAPSS*VGVFSP Trigger: GGGACTGAAGACCCCTACCCAACTTGAAGGGGCTGC...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTCTGGTTTCTGTTGATTaGTGTCTTGGTACCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPLVSVD*CLGTPR Trigger: CCTCGGGGTACCAAGACACCAATCAACAGAAACCAG...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | ACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAATGGGCTCATTGGTGCTaGCAGGATGTGAAGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: TNTRGCPTPARTHTHQGQWAHWC*QDVKKR Trigger: CCGCTTCTTCACATCCTGCCAGCACCAATGAGCCCA...TTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTGGACAATGGGCTCATTaGTGCTGGCAGGATGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTGQWAH*CWQDVK Trigger: CTTCACATCCTGCCAGCACCAATGAGCCCATTGTCC...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTATTTGCAACCAACTCTaGTCTCCCCTTGATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPICNQL*SPLDQP Trigger: TGGCTGATCAAGGGGAGATCAGAGTTGGTTGCAAAT...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | CTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCCTCCTCGCCACCACGAGAAACTaGTCAATCTGCCGGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LPFPCQGLTPDMFTLPLLATTRN*SICRSV Trigger: CACAGACCGGCAGATTGATCAGTTTCTCGTGGTGGC...GAGGAGGGGAAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTTCAGCTGGTTTCTGTTaGTTGGTGTCTTGGTACCCC | + |
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Preference number: 4 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTSAGFC*LVSWYP Trigger: GGGGTACCAAGACACCAATCAACAGAAACCAGCTGA...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACATCCAGCCCCATTCATaGCAGGTTTTGAACCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNIQPHS*QVLNPQ Trigger: CTGTGGGTTCAAAACCTGGCATGAATGGGGCTGGAT...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | ACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAAATCTTTGACGATAGTTaGCAAGGGCAGCCGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: TNTRGCPTPARTHTHQGQIFDDS*QGQPHQ Trigger: CTGGTGCGGCTGCCCTTGGCAACTATCGTCAAAGAT...TTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACTCAGGTCTGGATAAATaGCCTCTTGAGTGTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNSGLDK*PLECGS Trigger: AGAGCCACACTCAAGAGGTCATTTATCCAGACCTGA...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAGCAGCTGCACTCATGTaGAAGCTTGGCTGCCGAATT | + |
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Preference number: 4 (lower is better) Translates to: RYWQLQAVTNTRGCPTPAAAALM*KLGCRI Trigger: AATTCGGCAGCCAAGCTTGCACATGAGTGCAGCTGC...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | GGCAGTGTACTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTTCGGGACGCAGCAGCTaGACTCATGTGCAAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GSVLPFPCQGLTPDMFTLSGRSS*THVQAW Trigger: CCAAGCTTGCACATGAGTGCAGCTGCTGCGTCCCGA...AAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAGTACACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCACTTCCCCCTTATGTaGGTGGCTGGTAATGATTCA | + |
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Preference number: 4 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTHFPLM*VAGNDS Trigger: TGAATCATTACCAGCCACCCACATAAGGGGGAAGTG...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTCTGGGATCTCAGCTTaGAATTTGCAACCAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: CPTPARTHTHQGQPSLTPSGISA*NLQPTL Trigger: CAGAGTTGGTTGCAAATTCCAAGCTGAGATCCCAGA...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCTTTCCTTAAAGCCCTaGTGTCCTTTGTGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTLSLKP*CPLWPQ Trigger: TTGTGGCCACAAAGGACACCAGGGCTTTAAGGAAAG...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAATCCTCCAGGACAATaGGCTCATTGGTGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RYWQLQAVTNTRGCPTPANPPGQ*AHWCWQ Trigger: CTGCCAGCACCAATGAGCCCATTGTCCTGGAGGATT...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | ACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCTGGCGGATATCATTaGAATCCTTCCCGTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: TNTRGCPTPARTHTHQGQPGGYH*NPSRTS Trigger: AGAAGTACGGGAAGGATTTCAATGATATCCGCCAGG...TTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | ACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGATACCAAAAAGCCGCACCAGAGGGTaGATTTTCAGTGGCGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: THTPGSTLPHSLLPLIPKSRTRG*IFSGVL Trigger: CAAGACGCCACTGAAAATTCACCCTCTGGTGCGGCT...TTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACTGGAGCAAGAAAGTTTaGCTGTTCTTAGCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNWSKKV*LFLASN Trigger: GTTGCTGGCTAAGAACAGGCAAACTTTCTTGCTCCA...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCACAATGGGCTCATTGGTaGTGGCAGGATGTGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RYWQLQAVTNTRGCPTPAQWAHW*WQDVKK Trigger: CTTCTTCACATCCTGCCAGCACCAATGAGCCCATTG...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCATGTGAGAGGGTTGTCTaGGTCCCAGACTTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RYWQLQAVTNTRGCPTPACERVV*VPDFHL Trigger: GAGATGAAAGTCTGGGACCCAGACAACCCTCTCACA...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | GGCAGTGTACTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCAGGCCTCGATTCTaGGTCAGCTGGTTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GSVLPFPCQGLTPDMFTLPRPRF*VSWFLL Trigger: CAACAGAAACCAGCTGACCCAGAATCGAGGCCTGGG...AAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAGTACACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCACGGCGCATTTCCAGGTaGGTTAGAGCTTTCCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: RYWQLQAVTNTRGCPTPARRISR*VRAFLK Trigger: TTTAAGGAAAGCTCTAACTCACCTGGAAATGCGCCG...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | ACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAATTTTGGTTTCAGAGGTaGCTGAGCCACCAGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: TNTRGCPTPARTHTHQGQFWFQR*LSHQIF Trigger: AAAGATCTGGTGGCTCAGGCACCTCTGAAACCAAAA...TTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | TGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGCAGGGTAGAAAGTCCTaGCGGATATCATTGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: CKDTHTPGSTLPHSLLPLQGRKS*RISLKS Trigger: GGATTTCAATGATATCCGCCAGGACTTTCTACCCTG...CAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | TGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGGATCTGGTTAGGGTTTaGCTTGGTATAAGTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: CKDTHTPGSTLPHSLLPLDLVRV*LGISGD Trigger: ATCCCCACTTATACCAAGCCAAACCCTAACCAGATC...CAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | ACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAAGTTAGCTTTGTGGTCTaGAGCAAGAAAGTTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TNTRGCPTPARTHTHQGQVSFVV*SKKVCL Trigger: CAGGCAAACTTTCTTGCTCCAGACCACAAAGCTAAC...TTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACCGATTCTGGGTCAGCTaGTTTCTGTTGATTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLQAVTNTRGCPTPARTHRFWVS*FLLIGV Trigger: GACACCAATCAACAGAAACCAGCTGACCCAGAATCG...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | GGCAGTGTACTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTGGCCACAAATACCACTaGATTGGGAGCATCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVLPFPCQGLTPDMFTLGHKYH*IGSISR Trigger: CCTGCTGATGCTCCCAATCCAGTGGTATTTGTGGCC...AAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAGTACACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTTTCCACATTTCCATTTaGAGTCTTATTGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTFHISI*SLIELL Trigger: GAGGAGCTCAATAAGACTGCAAATGGAAATGTGGAA...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCATCCCCCTTATGTGGGTaGCTGGTAATGATTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RYWQLQAVTNTRGCPTPASPLCG*LVMIQT Trigger: AGTTTGAATCATTACCAGCCACCCACATAAGGGGGA...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTACAAGTCAGGCCCTTCTaGAATCCAGCCCCATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRALKFQLGKSGHRTVRVQVRPF*NPAPFM Trigger: CATGAATGGGGCTGGATTCCAGAAGGGCCTGACTTG...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACGACGAGTTAGCTTTGTaGTCTGGAGCAAGAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLQAVTNTRGCPTPARTHDELAL*SGARKF Trigger: AAACTTTCTTGCTCCAGACCACAAAGCTAACTCGTC...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTAACCCCGAGGTGTTTTTaGTTTCAGAGGTGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRALKFQLGKSGHRTVRVTPRCF*FQRCLS Trigger: GCTCAGGCACCTCTGAAACCAAAAACACCTCGGGGT...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | ACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGATACCAAAATTGGTTTCGATTATCTaGTTCTCCCTCTGCCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: THTPGSTLPHSLLPLIPKLVSII*FSLCQT Trigger: CGTTTGGCAGAGGGAGAATCAGATAATCGAAACCAA...TTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTATCGGATCGAGCACTCTaGCTTGATGGCATTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LRALKFQLGKSGHRTVRVSDRAL*LDGIGI Trigger: AATGCCAATGCCATCAAGGCAGAGTGCTCGATCCGA...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTATTAGTTTCTGACGCTTaGCTGCTGGCTGTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRALKFQLGKSGHRTVRVLVSDA*LLAVSL Trigger: CAAGCTCACAGCCAGCAGCCAAGCGTCAGAAACTAA...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | ACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGATACCAAAACAAATACCACTGGATTaGGAGCATCAGCAGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: THTPGSTLPHSLLPLIPKQIPLD*EHQQGL Trigger: TAAACCCTGCTGATGCTCCCAATCCAGTGGTATTTG...TTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCCTCCTCGGTAATGATTCAAACTaGCGAGAAAGAAAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFPCQGLTPDMFTLPLLGNDSN*RERKSS Trigger: AGAGCTTTTTCTTTCTCGGCAGTTTGAATCATTACC...GAGGAGGGGAAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | GGCAGTGTACTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTTTTGGGCTTCAGGTCTaGATAAATGACCTCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVLPFPCQGLTPDMFTLFGLQV*INDLLS Trigger: ACTCAAGAGGTCATTTATCCAGACCTGAAGCCCAAA...AAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAGTACACTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| 3UTR CAA 72 bp | ACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTaGATACCAAAAGGAATGAAGATTTGTATGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSTLPHSLLP*IPKGMKICMSW Trigger: CCAGGACATACAAATCTTCATTCCTTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | ACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGATACCAAAATTCAATCTTTTCTGCTaGATATACCGGTCTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: THTPGSTLPHSLLPLIPKFNLFC*IYRSVV Trigger: AACCACAGACCGGTATATTCAGCAGAAAAGATTGAA...TTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTACTCTGCCAAACGATCTaGGATCTCAGCTTGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LRALKFQLGKSGHRTVRVLCQTI*DLSLEF Trigger: AAATTCCAAGCTGAGATCCCAGATCGTTTGGCAGAG...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CCA 90 bp | CTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCCTCCTCATCTCCATCTTCTGTTaGTTTCGATTATCTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFPCQGLTPDMFTLPLLISIFC*FRLSDS Trigger: AGAATCAGATAATCGAAACCAACAGAAGATGGAGAT...GAGGAGGGGAAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR TCA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTAATTCATGCCAGGTTTTaGACCCACAGAAATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRALKFQLGKSGHRTVRVIHARF*THRNDL Trigger: CAGATCATTTCTGTGGGTTCAAAACCTGGCATGAAT...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR GCA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTAAATAAAACTGGACTATaGTTGCAAGTGACTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRALKFQLGKSGHRTVRVNKTGL*LQVTSR Trigger: CCTGGAAGTCACTTGCAAGCATAGTCCAGTTTTATT...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 90 bp | CAGCAGCTGCACTCATGTGCAAGCTTGGCTGCCGAATTGAGCTGCTaGAGTCTAGGGCTCTCGCGAAGGTTCCCACAGCTCGGGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QQLHSCASLAAELSC*SLGLSRRFPQLGPP Trigger: TGGTGGCCCGAGCTGTGGGAACCTTCGCGAGAGCCCTAGACTGCAGCAGCTCAATTCGGCAGCCAAGCTTGCACATGAGTGCAGCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 90 bp | ACGCAGCAGCTGCACTCATGTGCAAGCTTGGCTGCCGAATTGAGCTaGTGCAGTCTAGGGCTCTCGCGAAGGTTCCCACAGCTCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQQLHSCASLAAELS*CSLGLSRRFPQLGP Trigger: TGGCCCGAGCTGTGGGAACCTTCGCGAGAGCCCTAGACTGCAGCAGCTCAATTCGGCAGCCAAGCTTGCACATGAGTGCAGCTGCTGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 90 bp | GGGGCCGCACTGTCATCAGCGTTGGTTTCACCTTCAGGGGTAGGTTaGGCCTTCGGGCCGCTCGGCGCATTTCCAGGTGAGTTAGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GAALSSALVSPSGVG*AFGPLGAFPGELEL Trigger: AAGCTCTAACTCACCTGGAAATGCGCCGAGCGGCCCGAAGGCCCAACCTACCCCTGAAGGTGAAACCAACGCTGATGACAGTGCGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 90 bp | TTCAGGGGTAGGTTGGGCCTTCGGGCCGCTCGGCGCATTTCCAGGTaGGTTAGAGCTTTCCTTAAAGCCCTGGTGTCCTTTGTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FRGRLGLRAARRISR*VRAFLKALVSFVAT Trigger: TGTGGCCACAAAGGACACCAGGGCTTTAAGGAAAGCTCTAACTCACCTGGAAATGCGCCGAGCGGCCCGAAGGCCCAACCTACCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 90 bp | GACGATAGTTGCCAAGGGCAGCCGCACCAGAGGGTGAATTTTCAGTaGCGTCTTGGCAGCCTTAGGAAGTCGGATCGAGCACTCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DDSCQGQPHQRVNFQ*RLGSLRKSDRALCL Trigger: AAGGCAGAGTGCTCGATCCGACTTCCTAAGGCTGCCAAGACGCCACTGAAAATTCACCCTCTGGTGCGGCTGCCCTTGGCAACTATCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | ACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTTACCCCGAGGTGTTTTaGGTTTCAGAGGTGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TPEGVQPLQGHTHTRVNPYPEVF*VSEVPE Trigger: CTCAGGCACCTCTGAAACCAAAAACACCTCGGGGTA...AGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTAGACCCCTGGCTGTTTaGATTCCTCCTCAAACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTRPLAV*IPPQTP Trigger: GGGAGTTTGAGGAGGAATCAAAACAGCCAGGGGTCT...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACTTCTTAGCCAGCAACTaGGCCCGGTTAGCACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNFLASN*ARLALV Trigger: AACCAGTGCTAACCGGGCCAAGTTGCTGGCTAAGAA...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACGCACTGTCATCAGCGTaGGTTTCACCTTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNALSSA*VSPSGV Trigger: TACCCCTGAAGGTGAAACCAACGCTGATGACAGTGC...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 90 bp | ACCAGATCTTTGACGATAGTTGCCAAGGGCAGCCGCACCAGAGGGTaGATTTTCAGTGGCGTCTTGGCAGCCTTAGGAAGTCGGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TRSLTIVAKGSRTRG*IFSGVLAALGSRIE Trigger: CTCGATCCGACTTCCTAAGGCTGCCAAGACGCCACTGAAAATTCACCCTCTGGTGCGGCTGCCCTTGGCAACTATCGTCAAAGATCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 90 bp | TGGGCAGACTGTGTGGTGTGGCAGCTCTCACAAGTCAGGCCCTTCTaGAATCCAGCCCCATTCATGCCAGGTTTTGAACCCACAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: WADCVVWQLSQVRPF*NPAPFMPGFEPTEM Trigger: CATTTCTGTGGGTTCAAAACCTGGCATGAATGGGGCTGGATTCCAGAAGGGCCTGACTTGTGAGAGCTGCCACACCACACAGTCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | ACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCTGTCAGCCAAGCTGTaGAGGCTACTAGAAATATCC | + |
|
Preference number: 5 (lower is better) Translates to: TPEGVQPLQGHTHTRVNPLSAKL*RLLEIS Trigger: GGATATTTCTAGTAGCCTCAACAGCTTGGCTGACAG...AGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCCTCCTCCACTCATGTGCAAGCTaGGCTGCCGAATTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPFPCQGLTPDMFTLPLLHSCAS*AAELSC Trigger: GCAGCTCAATTCGGCAGCCAAGCTTGCACATGAGTG...GAGGAGGGGAAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | ACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTACAAATACCACTGGATaGGGAGCATCAGCAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPEGVQPLQGHTHTRVNPTNTTG*GASAGF Trigger: AAACCCTGCTGATGCTCCCAATCCAGTGGTATTTGT...AGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 90 bp | GCCACAAATACCACTGGATTGGGAGCATCAGCAGGGTTTAGTTTCTaGCGCTTGGCTGCTGGCTGTGAGCTTGAACGAATCCCTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATNTTGLGASAGFSF*RLAAGCELERIPEA Trigger: GGCTTCAGGGATTCGTTCAAGCTCACAGCCAGCAGCCAAGCGTCAGAAACTAAACCCTGCTGATGCTCCCAATCCAGTGGTATTTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | TGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTATCTGGGATCTCAGCTaGGAATTTGCAACCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPTPARTHTHQGQPSLTPIWDLS*EFATNS Trigger: AGAGTTGGTTGCAAATTCCAAGCTGAGATCCCAGAT...AGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | ACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGATACCAAAACGGTCTGTGAGAGGGTaGTCTGGGTCCCAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: THTPGSTLPHSLLPLIPKRSVRG*SGSQTF Trigger: GAAAGTCTGGGACCCAGACAACCCTCTCACAGACCG...TTTTGGTATCAAAGGGAGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTTCCTGGCGGATATCATaGAAATCCTTCCCGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPLQGHTHTRVNPPSLLTSWRIS*KSFPYF Trigger: GAAGTACGGGAAGGATTTCAATGATATCCGCCAGGA...AGTAAGGAGTGAGGGAGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | ACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTAAAACTGGACTATGCTaGCAAGTGACTTCCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPEGVQPLQGHTHTRVNPKTGLC*QVTSRV Trigger: TACCCTGGAAGTCACTTGCAAGCATAGTCCAGTTTT...AGGGTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCTGGAGCAAGAAAGTTaGCCTGTTCTTAGCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNLEQES*PVLSQQ Trigger: TTGCTGGCTAAGAACAGGCAAACTTTCTTGCTCCAG...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | GGCAGTGTACTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTTTCGGGCAGCCCTCCTaGGCTGTAATAGATCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSVLPFPCQGLTPDMFTLFGQPS*AVIDLG Trigger: GCCGAGATCTATTACAGCCAAGGAGGGCTGCCCGAA...AAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAGTACACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAATTTTCAGTGGCGTCTaGGCAGCCTTAGGAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RYWQLQAVTNTRGCPTPAIFSGV*AALGSR Trigger: CCGACTTCCTAAGGCTGCCAAGACGCCACTGAAAAT...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACAAGCCCTGGTGTCCTTaGTGGCCACAAATACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QLQAVTNTRGCPTPARTHKPWCP*WPQIPL Trigger: CAGTGGTATTTGTGGCCACAAAGGACACCAGGGCTT...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACAGGACAATGGGCTCATaGGTGCTGGCAGGATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLQAVTNTRGCPTPARTHRTMGS*VLAGCE Trigger: TTCACATCCTGCCAGCACCAATGAGCCCATTGTCCT...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 90 bp | GTGCTTCAGTTGATGTCTCTGCTGCTCGGAGACCCCTGGCTGTTTTaGTTCCTCCTCAAACTCCCGAGCATTACTGTCAGCCAAGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLQLMSLLLGDPWLF*FLLKLPSITVSQAV Trigger: AACAGCTTGGCTGACAGTAATGCTCGGGAGTTTGAGGAGGAATCAAAACAGCCAGGGGTCTCCGAGCAGCAGAGACATCAACTGAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 90 bp | AGATCTCGGCACATTCGTCTGGCTAGACGAGTTAGCTTTGTGGTCTaGAGCAAGAAAGTTTGCCTGTTCTTAGCCAGCAACTTGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRHIRLARRVSFVV*SKKVCLFLASNLAR Trigger: CCGGGCCAAGTTGCTGGCTAAGAACAGGCAAACTTTCTTGCTCCAGACCACAAAGCTAACTCGTCTAGCCAGACGAATGTGCCGAGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 90 bp | TTCGGGCAGCCCTCCTTGGCTGTAATAGATCTCGGCACATTCGTCTaGCTAGACGAGTTAGCTTTGTGGTCTGGAGCAAGAAAGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGQPSLAVIDLGTFV*LDELALWSGARKFA Trigger: GGCAAACTTTCTTGCTCCAGACCACAAAGCTAACTCGTCTAGCCAGACGAATGTGCCGAGATCTATTACAGCCAAGGAGGGCTGCCCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCATTTGCAGTCTTATaGAGCTCCTCAATCCGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LTPEGVQPLQGHTHTRVNPFAVL*SSSIRL Trigger: TAGACGGATTGAGGAGCTCAATAAGACTGCAAATGG...GTTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCCTCCTCTGGATAAATGACCTCTaGAGTGTGGCTCTGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPFPCQGLTPDMFTLPLLWINDL*SVALWC Trigger: GCACCACAGAGCCACACTCAAGAGGTCATTTATCCA...GAGGAGGGGAAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS-3UTR CAA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACGTCAGCTGGTTTCTGTaGATTGGTGTCTTGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: QLQAVTNTRGCPTPARTHVSWFL*IGVLVP Trigger: GGGTACCAAGACACCAATCAACAGAAACCAGCTGAC...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 90 bp | CGTCTGGCTAGACGAGTTAGCTTTGTGGTCTGGAGCAAGAAAGTTTaGCTGTTCTTAGCCAGCAACTTGGCCCGGTTAGCACTGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLARRVSFVVWSKKV*LFLASNLARLALVV Trigger: TACAACCAGTGCTAACCGGGCCAAGTTGCTGGCTAAGAACAGGCAAACTTTCTTGCTCCAGACCACAAAGCTAACTCGTCTAGCCAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACAACTCTGATCTCCCCTaGATCAGCCAGAAGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLQAVTNTRGCPTPARTHNSDLP*ISQKCL Trigger: AAGACACTTCTGGCTGATCAAGGGGAGATCAGAGTT...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | CAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACGTCATAGCCATTCCTTaGCAAGGTATCCATGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: QLQAVTNTRGCPTPARTHVIAIP*QGIHGM Trigger: CATGCCATGGATACCTTGCAAAGGAATGGCTATGAC...GTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS-3UTR CAA 90 bp | CTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTAAGCAGCCCCTTCAAGTaGGGTAGGGGTCTTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRALKFQLGKSGHRTVRVSSPFK*GRGLQS Trigger: GGACTGAAGACCCCTACCCAACTTGAAGGGGCTGCT...TACTCTTACTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCCCCTCCTCATCGAGCACTCTGCCTaGATGGCATTGGCATTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LPFPCQGLTPDMFTLPLLIEHSA*MALALI Trigger: TATCAATGCCAATGCCATCAAGGCAGAGTGCTCGAT...GAGGAGGGGAAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS CCA 90 bp | CTGTCTCGTTCAAGAGAGTCACGCTGCACTTCCCCCTTATGTGGGTaGCTGGTAATGATTCAAACTGCCGAGAAAGAAAAAGCTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRSRESRCTSPLCG*LVMIQTAEKEKALG Trigger: ACCGAGAGCTTTTTCTTTCTCGGCAGTTTGAATCATTACCAGCCACCCACATAAGGGGGAAGTGCAGCGTGACTCTCTTGAACGAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS CCA 90 bp | CAGCTGGTTTCTGTTGATTGGTGTCTTGGTACCCCGAGGTGTTTTTaGTTTCAGAGGTGCCTGAGCCACCAGATCTTTGACGATAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLVSVDWCLGTPRCF*FQRCLSHQIFDDSC Trigger: GCAACTATCGTCAAAGATCTGGTGGCTCAGGCACCTCTGAAACCAAAAACACCTCGGGGTACCAAGACACCAATCAACAGAAACCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS-3UTR CAA 90 bp | CGTTACTGGCAGTTACAGGCAGTAACTAACACCAGAGGGTGTCCAACCCCTGCAATCTCAGCTTGGAATTaGCAACCAACTCTGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RYWQLQAVTNTRGCPTPAISAWN*QPTLIS Trigger: GGAGATCAGAGTTGGTTGCAAATTCCAAGCTGAGAT...TGCAGGGGTTGGACACCCTCTGGTGTTAGTTACTGCCTGTAACTGCCAGTAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 90 bp | CTGCCAAACGATCTGGGATCTCAGCTTGGAATTTGCAACCAACTCTaGTCTCCCCTTGATCAGCCAGAAGTGTCTTCTGCACAGGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPNDLGSQLGICNQL*SPLDQPEVSSAQDQ Trigger: TTGATCCTGTGCAGAAGACACTTCTGGCTGATCAAGGGGAGATCAGAGTTGGTTGCAAATTCCAAGCTGAGATCCCAGATCGTTTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS TCA 90 bp | TGCTTGCAAGTGACTTCCAGGGTAGAAAGTCCTGGCGGATATCATTaGAATCCTTCCCGTACTTCTCCAGAGCCTCTTCAAACAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CLQVTSRVESPGGYH*NPSRTSPEPLQTAW Trigger: CCATGCTGTTTGAAGAGGCTCTGGAGAAGTACGGGAAGGATTTCAATGATATCCGCCAGGACTTTCTACCCTGGAAGTCACTTGCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS CCA 90 bp | GTGAGAGGGTTGTCTGGGTCCCAGACTTTCATCTCCATCTTCTGTTaGTTTCGATTATCTGATTCTCCCTCTGCCAAACGATCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VRGLSGSQTFISIFC*FRLSDSPSAKRSGI Trigger: GATCCCAGATCGTTTGGCAGAGGGAGAATCAGATAATCGAAACCAACAGAAGATGGAGATGAAAGTCTGGGACCCAGACAACCCTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 90 bp | CACCACGAGAAACTGATCAATCTGCCGGTCTGTGAGAGGGTTGTCTaGGTCCCAGACTTTCATCTCCATCTTCTGTTGGTTTCGATTATC | + |
|
Preference number: 5 (lower is better) Translates to: HHEKLINLPVCERVV*VPDFHLHLLLVSII Trigger: GATAATCGAAACCAACAGAAGATGGAGATGAAAGTCTGGGACCCAGACAACCCTCTCACAGACCGGCAGATTGATCAGTTTCTCGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS-3UTR CAA 90 bp | ACTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAAAAAGACAGACAACCTTaGCTTCCACATTTCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNTRGCPTPARTHTHQGQKDRQP*LPHFHL Trigger: CAAATGGAAATGTGGAAGCAAAGGTTGTCTGTCTTT...TTGACCCTGGTGTGTGTGTGTCCTTGCAGGGGTTGGACACCCTCTGGTGTTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGTGTACTTCCCTTCCCCTGCCAGGGACTAACACCTGATATGTTTACTCTTCTGTTGATTGGTGTCTaGGTACCCCGAGGTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSVLPFPCQGLTPDMFTLLLIGV*VPRGVF Trigger: AAAAACACCTCGGGGTACCAAGACACCAATCAACAG...AAGAGTAAACATATCAGGTGTTAGTCCCTGGCAGGGGAAGGGAAGTACACTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS TCA 90 bp | ACAAGTCAGGCCCTTCTGGAATCCAGCCCCATTCATGCCAGGTTTTaGACCCACAGAAATGATCTGGTTAGGGTTTGGCTTGGTATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TSQALLESSPIHARF*THRNDLVRVWLGIS Trigger: ACTTATACCAAGCCAAACCCTAACCAGATCATTTCTGTGGGTTCAAAACCTGGCATGAATGGGGCTGGATTCCAGAAGGGCCTGACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 90 bp | CTAGATACTGGTTTAAGATGTCTGTCTCGTTCAAGAGAGTCACGCTaGACTTCCCCCTTATGTGGGTGGCTGGTAATGATTCAAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LDTGLRCLSRSRESR*TSPLCGWLVMIQTA Trigger: GGCAGTTTGAATCATTACCAGCCACCCACATAAGGGGGAAGTGCAGCGTGACTCTCTTGAACGAGACAGACATCTTAAACCAGTATCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 90 bp | ATGTCTGTCTCGTTCAAGAGAGTCACGCTGCACTTCCCCCTTATGTaGGTGGCTGGTAATGATTCAAACTGCCGAGAAAGAAAAAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSVSFKRVTLHFPLM*VAGNDSNCRERKSS Trigger: AGAGCTTTTTCTTTCTCGGCAGTTTGAATCATTACCAGCCACCCACATAAGGGGGAAGTGCAGCGTGACTCTCTTGAACGAGACAGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 90 bp | GTGAAGAAGCGGGCAGAGGAACTGGGGGCCGCACTGTCATCAGCGTaGGTTTCACCTTCAGGGGTAGGTTGGGCCTTCGGGCCGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VKKRAEELGAALSSA*VSPSGVGWAFGPLG Trigger: GCCGAGCGGCCCGAAGGCCCAACCTACCCCTGAAGGTGAAACCAACGCTGATGACAGTGCGGCCCCCAGTTCCTCTGCCCGCTTCTTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 72 bp | CGGGCAGAGGAACTGGGGGCCGCACTGTCATCAGCGTaGGTTTCACCTTCAGGGGTAGGTTGGGCCTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RAEELGAALSSA*VSPSGVGWAFG Trigger: CCCGAAGGCCCAACCTACCCCTGAAGGTGAAACCAACGCTGATGACAGTGCGGCCCCCAGTTCCTCTGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | CTGTCATCAGCGTTGGTTTCACCTTCAGGGGTAGGTTaGGCCTTCGGGCCGCTCGGCGCATTTCCAGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSALVSPSGVG*AFGPLGAFPGE Trigger: CTCACCTGGAAATGCGCCGAGCGGCCCGAAGGCCCAACCTACCCCTGAAGGTGAAACCAACGCTGATGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 72 bp | CACTCATGTGCAAGCTTGGCTGCCGAATTGAGCTGCTaGAGTCTAGGGCTCTCGCGAAGGTTCCCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSCASLAAELSC*SLGLSRRFPQL Trigger: GAGCTGTGGGAACCTTCGCGAGAGCCCTAGACTGCAGCAGCTCAATTCGGCAGCCAAGCTTGCACATGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 72 bp | CTGCACTCATGTGCAAGCTTGGCTGCCGAATTGAGCTaGTGCAGTCTAGGGCTCTCGCGAAGGTTCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LHSCASLAAELS*CSLGLSRRFPQ Trigger: CTGTGGGAACCTTCGCGAGAGCCCTAGACTGCAGCAGCTCAATTCGGCAGCCAAGCTTGCACATGAGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | TGCCAAGGGCAGCCGCACCAGAGGGTGAATTTTCAGTaGCGTCTTGGCAGCCTTAGGAAGTCGGATCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQGQPHQRVNFQ*RLGSLRKSDRA Trigger: TGCTCGATCCGACTTCCTAAGGCTGCCAAGACGCCACTGAAAATTCACCCTCTGGTGCGGCTGCCCTTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 72 bp | AGGTTGGGCCTTCGGGCCGCTCGGCGCATTTCCAGGTaGGTTAGAGCTTTCCTTAAAGCCCTGGTGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLGLRAARRISR*VRAFLKALVSF Trigger: AAAGGACACCAGGGCTTTAAGGAAAGCTCTAACTCACCTGGAAATGCGCCGAGCGGCCCGAAGGCCCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 72 bp | GGGCCACCACGAGAAACTGATCAATCTGCCGGTCTGTaGGAGGGTTGTCTGGGTCCCAGACTTTCATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPPRETDQSAGL*EGCLGPRLSSP Trigger: TGGAGATGAAAGTCTGGGACCCAGACAACCCTCTCACAGACCGGCAGATTGATCAGTTTCTCGTGGTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 72 bp | CAGAGGTGCCTGAGCCACCAGATCTTTGACGATAGTTaGCAAGGGCAGCCGCACCAGAGGGTGAATTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QRCLSHQIFDDS*QGQPHQRVNFQ Trigger: CTGAAAATTCACCCTCTGGTGCGGCTGCCCTTGGCAACTATCGTCAAAGATCTGGTGGCTCAGGCACCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 72 bp | AGAGACTTTGGGCTTCAGGTCTGGATAAATGACCTCTaGAGTGTGGCTCTGTGGTGCCCCGAGCAGCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RDFGLQVWINDL*SVALWCPEQPL Trigger: AAGGGGCTGCTCGGGGCACCACAGAGCCACACTCAAGAGGTCATTTATCCAGACCTGAAGCCCAAAGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 72 bp | TTGACGATAGTTGCCAAGGGCAGCCGCACCAGAGGGTaGATTTTCAGTGGCGTCTTGGCAGCCTTAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LTIVAKGSRTRG*IFSGVLAALGS Trigger: ACTTCCTAAGGCTGCCAAGACGCCACTGAAAATTCACCCTCTGGTGCGGCTGCCCTTGGCAACTATCGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 90 bp | GGTGCTTCAGTTGATGTCTCTGCTGCTCGGAGACCCCTGGCTGTTTaGATTCCTCCTCAAACTCCCGAGCATTACTGTCAGCCAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GASVDVSAARRPLAV*IPPQTPEHYCQPSC Trigger: ACAGCTTGGCTGACAGTAATGCTCGGGAGTTTGAGGAGGAATCAAAACAGCCAGGGGTCTCCGAGCAGCAGAGACATCAACTGAAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 72 bp | TTGATGTCTCTGCTGCTCGGAGACCCCTGGCTGTTTTaGTTCCTCCTCAAACTCCCGAGCATTACTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LMSLLLGDPWLF*FLLKLPSITVS Trigger: GCTGACAGTAATGCTCGGGAGTTTGAGGAGGAATCAAAACAGCCAGGGGTCTCCGAGCAGCAGAGACATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 72 bp | ACCACTGGATTGGGAGCATCAGCAGGGTTTAGTTTCTaGCGCTTGGCTGCTGGCTGTGAGCTTGAACGAATC | + |
|
Preference number: 6 (lower is better) Translates to: TTGLGASAGFSF*RLAAGCELERI Trigger: GATTCGTTCAAGCTCACAGCCAGCAGCCAAGCGTCAGAAACTAAACCCTGCTGATGCTCCCAATCCAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | GATTGGGAGCATCAGCAGGGTTTAGTTTCTGACGCTTaGCTGCTGGCTGTGAGCTTGAACGAATCCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DWEHQQGLVSDA*LLAVSLNESLK Trigger: CTTCAGGGATTCGTTCAAGCTCACAGCCAGCAGCCAAGCGTCAGAAACTAAACCCTGCTGATGCTCCCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 72 bp | GTTGATGTCTCTGCTGCTCGGAGACCCCTGGCTGTTTaGATTCCTCCTCAAACTCCCGAGCATTACTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VDVSAARRPLAV*IPPQTPEHYCQ Trigger: CTGACAGTAATGCTCGGGAGTTTGAGGAGGAATCAAAACAGCCAGGGGTCTCCGAGCAGCAGAGACATCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | CCCTCCTTGGCTGTAATAGATCTCGGCACATTCGTCTaGCTAGACGAGTTAGCTTTGTGGTCTGGAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSLAVIDLGTFV*LDELALWSGAR Trigger: TCTTGCTCCAGACCACAAAGCTAACTCGTCTAGCCAGACGAATGTGCCGAGATCTATTACAGCCAAGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | CAGGCCTCGATTCTGGGTCAGCTGGTTTCTGTTGATTaGTGTCTTGGTACCCCGAGGTGTTTTTGGTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QASILGQLVSVD*CLGTPRCFWFQ Trigger: CTGAAACCAAAAACACCTCGGGGTACCAAGACACCAATCAACAGAAACCAGCTGACCCAGAATCGAGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 72 bp | CGATTCTGGGTCAGCTGGTTTCTGTTGATTGGTGTCTaGGTACCCCGAGGTGTTTTTGGTTTCAGAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RFWVSWFLLIGV*VPRGVFGFRGA Trigger: GGCACCTCTGAAACCAAAAACACCTCGGGGTACCAAGACACCAATCAACAGAAACCAGCTGACCCAGAATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS TCA 72 bp | GCCCTTCTGGAATCCAGCCCCATTCATGCCAGGTTTTaGACCCACAGAAATGATCTGGTTAGGGTTTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ALLESSPIHARF*THRNDLVRVWL Trigger: AAGCCAAACCCTAACCAGATCATTTCTGTGGGTTCAAAACCTGGCATGAATGGGGCTGGATTCCAGAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 72 bp | AGACGAGTTAGCTTTGTGGTCTGGAGCAAGAAAGTTTaGCTGTTCTTAGCCAGCAACTTGGCCCGGTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRVSFVVWSKKV*LFLASNLARLA Trigger: TGCTAACCGGGCCAAGTTGCTGGCTAAGAACAGGCAAACTTTCTTGCTCCAGACCACAAAGCTAACTCGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS GCA 72 bp | TGTCTTGGTACCCCGAGGTGTTTTTGGTTTCAGAGGTaGCTGAGCCACCAGATCTTTGACGATAGTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLGTPRCFWFQR*LSHQIFDDSCQ Trigger: TTGGCAACTATCGTCAAAGATCTGGTGGCTCAGGCACCTCTGAAACCAAAAACACCTCGGGGTACCAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS CCA 72 bp | TCGTTCAAGAGAGTCACGCTGCACTTCCCCCTTATGTaGGTGGCTGGTAATGATTCAAACTGCCGAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFKRVTLHFPLM*VAGNDSNCRER Trigger: TCTTTCTCGGCAGTTTGAATCATTACCAGCCACCCACATAAGGGGGAAGTGCAGCGTGACTCTCTTGAACGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | TCTGTTGATTGGTGTCTTGGTACCCCGAGGTGTTTTTaGTTTCAGAGGTGCCTGAGCCACCAGATCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVDWCLGTPRCF*FQRCLSHQIFD Trigger: GTCAAAGATCTGGTGGCTCAGGCACCTCTGAAACCAAAAACACCTCGGGGTACCAAGACACCAATCAACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS CCA 72 bp | GAGTTAGAGCTTTCCTTAAAGCCCTGGTGTCCTTTGTaGCCACAAATACCACTGGATTGGGAGCATCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELELSLKPWCPL*PQIPLDWEHQQ Trigger: CTGCTGATGCTCCCAATCCAGTGGTATTTGTGGCCACAAAGGACACCAGGGCTTTAAGGAAAGCTCTAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 72 bp | GGTGAGTTAGAGCTTTCCTTAAAGCCCTGGTGTCCTTaGTGGCCACAAATACCACTGGATTGGGAGCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: GELELSLKPWCP*WPQIPLDWEHQ Trigger: CTGATGCTCCCAATCCAGTGGTATTTGTGGCCACAAAGGACACCAGGGCTTTAAGGAAAGCTCTAACTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS CAA 90 bp | GCATTTCCAGGTGAGTTAGAGCTTTCCTTAAAGCCCTGGTGTCCTTaGTGGCCACAAATACCACTGGATTGGGAGCATCAGCAGGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: AFPGELELSLKPWCP*WPQIPLDWEHQQGL Trigger: TAAACCCTGCTGATGCTCCCAATCCAGTGGTATTTGTGGCCACAAAGGACACCAGGGCTTTAAGGAAAGCTCTAACTCACCTGGAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS TCA 72 bp | GATCTGGGATCTCAGCTTGGAATTTGCAACCAACTCTaGTCTCCCCTTGATCAGCCAGAAGTGTCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DLGSQLGICNQL*SPLDQPEVSSA Trigger: TGCAGAAGACACTTCTGGCTGATCAAGGGGAGATCAGAGTTGGTTGCAAATTCCAAGCTGAGATCCCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS TCA 72 bp | GTGACTTCCAGGGTAGAAAGTCCTGGCGGATATCATTaGAATCCTTCCCGTACTTCTCCAGAGCCTCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VTSRVESPGGYH*NPSRTSPEPLQ Trigger: TTGAAGAGGCTCTGGAGAAGTACGGGAAGGATTTCAATGATATCCGCCAGGACTTTCTACCCTGGAAGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
||
| CDS GCA 72 bp | GGTTTAAGATGTCTGTCTCGTTCAAGAGAGTCACGCTaGACTTCCCCCTTATGTGGGTGGCTGGTAATGATT | + |
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Preference number: 6 (lower is better) Translates to: GLRCLSRSRESR*TSPLCGWLVMI Trigger: AATCATTACCAGCCACCCACATAAGGGGGAAGTGCAGCGTGACTCTCTTGAACGAGACAGACATCTTAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | AAACTGATCAATCTGCCGGTCTGTGAGAGGGTTGTCTaGGTCCCAGACTTTCATCTCCATCTTCTGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: KLINLPVCERVV*VPDFHLHLLLV Trigger: AACCAACAGAAGATGGAGATGAAAGTCTGGGACCCAGACAACCCTCTCACAGACCGGCAGATTGATCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | CACATTCGTCTGGCTAGACGAGTTAGCTTTGTGGTCTaGAGCAAGAAAGTTTGCCTGTTCTTAGCCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: HIRLARRVSFVV*SKKVCLFLASN Trigger: GTTGCTGGCTAAGAACAGGCAAACTTTCTTGCTCCAGACCACAAAGCTAACTCGTCTAGCCAGACGAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 72 bp | AGTGACTTCCAGGGTAGAAAGTCCTGGCGGATATCATaGAAATCCTTCCCGTACTTCTCCAGAGCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SDFQGRKSWRIS*KSFPYFSRASS Trigger: TGAAGAGGCTCTGGAGAAGTACGGGAAGGATTTCAATGATATCCGCCAGGACTTTCTACCCTGGAAGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | TCAAGAGAGTCACGCTGCACTTCCCCCTTATGTGGGTaGCTGGTAATGATTCAAACTGCCGAGAAAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: SRESRCTSPLCG*LVMIQTAEKEK Trigger: TTTTTCTTTCTCGGCAGTTTGAATCATTACCAGCCACCCACATAAGGGGGAAGTGCAGCGTGACTCTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CAA 72 bp | CTCAGCTTGGAATTTGCAACCAACTCTGATCTCCCCTaGATCAGCCAGAAGTGTCTTCTGCACAGGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: LSLEFATNSDLP*ISQKCLLHRIK Trigger: TTTGATCCTGTGCAGAAGACACTTCTGGCTGATCAAGGGGAGATCAGAGTTGGTTGCAAATTCCAAGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS CCA 72 bp | TTGTCTGGGTCCCAGACTTTCATCTCCATCTTCTGTTaGTTTCGATTATCTGATTCTCCCTCTGCCAAACGA | + |
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Preference number: 6 (lower is better) Translates to: LSGSQTFISIFC*FRLSDSPSAKR Trigger: TCGTTTGGCAGAGGGAGAATCAGATAATCGAAACCAACAGAAGATGGAGATGAAAGTCTGGGACCCAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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| CDS GCA 72 bp | AGAAATATCCCTTCGCCGGAAAAGACAGACAACCTTTaGTTCCACATTTCCATTTGCAGTCTTATTGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RNIPSPEKTDNL*FHISICSLIEL Trigger: GAGCTCAATAAGACTGCAAATGGAAATGTGGAAGCAAAGGTTGTCTGTCTTTTCCGGCGAAGGGATATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096240.3 |
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