Pregenerated sensors for MSTO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068922Ensembl transcript IDs: ENSMUST00000107494.8, ENSMUST00000126245.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTTTGTCCTGGGCCTATGGCATGCCTCTTTCTTTGGATCATTGTaGACTCTTCAGGGATTCTTAAGGGACTGTAACCAGTGTCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: KFVLGLWHASFFGSL*TLQGFLRDCNQCPL Trigger: GAGGGGACACTGGTTACAGTCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCATAGGCCCAGGACAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| 3UTR TCA 90 bp | ATCTACTCTGGAGTTCCCCAGTGCATTTCTTCTTTAAAATCTGTTTaGCTTAAGTTTGTCCTGGGCCTATGGCATGCCTCTTTCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: IYSGVPQCISSLKSV*LKFVLGLWHASFFG Trigger: TCCAAAGAAAGAGGCATGCCATAGGCCCAGGACAAACTTAAGTCAAACAGATTTTAAAGAAGAAATGCACTGGGGAACTCCAGAGTAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| 3UTR CAA 90 bp | CTTAAGTTTGTCCTGGGCCTATGGCATGCCTCTTTCTTTGGATCATaGTGGACTCTTCAGGGATTCTTAAGGGACTGTAACCAGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LKFVLGLWHASFFGS*WTLQGFLRDCNQCP Trigger: GGGACACTGGTTACAGTCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCATAGGCCCAGGACAAACTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGAATTCTCAAAGAGGAGTaGGAGGCCTCTCAACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: MACLFLWIIVDSSGILKGILKEE*EASQLS Trigger: GCTGAGTTGAGAGGCCTCCCACTCCTCTTTGAGAAT...TCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| 3UTR CCA 72 bp | CTGGGCCTATGGCATGCCTCTTTCTTTGGATCATTGTaGACTCTTCAGGGATTCTTAAGGGACTGTAACCAG | + |
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Preference number: 3 (lower is better) Translates to: LGLWHASFFGSL*TLQGFLRDCNQ Trigger: CTGGTTACAGTCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCATAGGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| 3UTR TCA 72 bp | GGAGTTCCCCAGTGCATTTCTTCTTTAAAATCTGTTTaGCTTAAGTTTGTCCTGGGCCTATGGCATGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GVPQCISSLKSV*LKFVLGLWHAS Trigger: AGAGGCATGCCATAGGCCCAGGACAAACTTAAGTCAAACAGATTTTAAAGAAGAAATGCACTGGGGAACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| 3UTR CCA 72 bp | ACACCAGGAGTCAGAAAGTCTGACCTGGATCTACTCTaGAGTTCCCCAGTGCATTTCTTCTTTAAAATCTGT | + |
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Preference number: 3 (lower is better) Translates to: TPGVRKSDLDLL*SSPVHFFFKIC Trigger: ACAGATTTTAAAGAAGAAATGCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTCCTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | GGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTGGAGCGCAGCATCCTGCTaGTTCCACCAGTGCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: GFLHGSFYYKFSPTTLPWSAASC*FHQCAP Trigger: GGGGGCGCACTGGTGGAACCAGCAGGATGCTGCGCT...CCAGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR GCA 90 bp | GGTCCCTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACCCAGCGCAGCATCCTaGTGGTTCCACCAGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GPYTLGSCTAAFIINSLPPSAAS*WFHQCA Trigger: GGCGCACTGGTGGAACCAGCAGGATGCTGCGCTGGG...TGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR GCA 90 bp | CATTCTCAAAGAGGAGTGGGAGGCCTCTCAACTCAGCTGTTTCTCTCAGTTCTGGTGCTGAGCTTCCCCTaGCACGCTACTGCAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: HSQRGVGGLSTQLFLSVLVLSFP*HATAAS Trigger: AGAGGCTGCAGTAGCGTGGCAGGGGAAGCTCAGCAC...CAGAACTGAGAGAAACAGCTGAGTTGAGAGGCCTCCCACTCCTCTTTGAGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR GCA 90 bp | GGATTCTTAAGGGACTGTAACCAGTGTCCCCTCAGTGATAAGATGGTACATTCTCCCAGCGCAGCATCCTaGTGGTTCCACCAGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GFLRDCNQCPLSDKMVHSPSAAS*WFHQCA Trigger: GGCGCACTGGTGGAACCAGCAGGATGCTGCGCTGGG...AGAATGTACCATCTTATCACTGAGGGGACACTGGTTACAGTCCCTTAAGAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR GCA 90 bp | AGGTCCCTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCGTGCTGAGCTTCCCCTaGCACGCTACTGCAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RSLHTGFLHGSFYYKFSPVLSFP*HATAAS Trigger: AGAGGCTGCAGTAGCGTGGCAGGGGAAGCTCAGCAC...GGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAGGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CCA 90 bp | ATGGCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGAAGCGCAGCATCCTGCTaGTTCCACCAGTGCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: MACLFLWIIVDSSGILKGSAASC*FHQCAP Trigger: GGGGGCGCACTGGTGGAACCAGCAGGATGCTGCGCT...TCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | ATACACCAGGAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGCAGGATGGCGCTACAGTaGAAGGGCAGAGTGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: IHQESESLTWIYSGVPQCRMALQ*KGRVAS Trigger: TGATGCCACTCTGCCCTTCCACTGTAGCGCCATCCT...GCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTCCTGGTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | TTAGAGAATACACCAGGAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGAGGCGCATGCGTaGAGAGCAGAGGGCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LENTPGVRKSDLDLLWSSPEAHA*RAEGRG Trigger: ACCTCTGCCCTCTGCTCTCCACGCATGCGCCTCTGG...GGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTCCTGGTGTATTCTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | CTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCCAGAGGCGCATGCGTaGAGAGCAGAGGGCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LHTGFLHGSFYYKFSPTTPEAHA*RAEGRG Trigger: ACCTCTGCCCTCTGCTCTCCACGCATGCGCCTCTGG...GGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTGCAGGTCAAGTCTGCTaGGCTCTTCAGCCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LGSCTAAFIINSLPLPSPAGQVC*ALQPSL Trigger: GAGACTTGGCTGAAGAGCTCAGCAGACTTGACCTGC...AGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR GCA 90 bp | TACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTTCTCCAGAGGCGCATaGGTGGAGAGCAGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: YTLGSCTAAFIINSLPLPFSRGA*VESRGQ Trigger: CTGCCCTCTGCTCTCCACGCATGCGCCTCTGGAGAA...GGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR TCA 90 bp | TCCCTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTCATCTCTGTGTGTGCTaGGCTTCCCCTGCCACGCTA | + |
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Preference number: 4 (lower is better) Translates to: SLHTGFLHGSFYYKFSPTHLCVC*ASPATL Trigger: TAGCGTGGCAGGGGAAGCTCAGCACACACAGAGATG...AGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR GCA 90 bp | GGATTCTTAAGGGACTGTAACCAGTGTCCCCTCAGTGATAAGATGGTACATTCTTTCTCCAGAGGCGCATaGGTGGAGAGCAGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GFLRDCNQCPLSDKMVHSFSRGA*VESRGQ Trigger: CTGCCCTCTGCTCTCCACGCATGCGCCTCTGGAGAA...AGAATGTACCATCTTATCACTGAGGGGACACTGGTTACAGTCCCTTAAGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR GCA 90 bp | AGGTCCCTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCTCTTCCATGTCATCCTaGTCCACGCCAGCGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: RSLHTGFLHGSFYYKFSPSSMSS*STPASM Trigger: CATGGACGCTGGCGTGGAGCAGGATGACATGGAAGA...GGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAGGGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR GCA 90 bp | ATGGTACATTCTCAAAGAGGAGTGGGAGGCCTCTCAACTCAGCTGTTTCTCTCAGACTGTTCCTGTTCCTaGCATGAGGGAGGTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: MVHSQRGVGGLSTQLFLSDCSCS*HEGGPE Trigger: TTCGGGACCTCCCTCATGGCAGGAACAGGAACAGTC...TGAGAGAAACAGCTGAGTTGAGAGGCCTCCCACTCCTCTTTGAGAATGTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR TCA 90 bp | GGATTCTTAAGGGACTGTAACCAGTGTCCCCTCAGTGATAAGATGGTACATTCTCATCTCTGTGTGTGCTaGGCTTCCCCTGCCACGCTA | + |
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Preference number: 4 (lower is better) Translates to: GFLRDCNQCPLSDKMVHSHLCVC*ASPATL Trigger: TAGCGTGGCAGGGGAAGCTCAGCACACACAGAGATG...AGAATGTACCATCTTATCACTGAGGGGACACTGGTTACAGTCCCTTAAGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCAGCACATCAGCCAAGTaGGCCATGGTAACCATTGAG | + |
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Preference number: 4 (lower is better) Translates to: TGFLHGSFYYKFSPTTLPSTSAK*AMVTIE Trigger: CTCAATGGTTACCATGGCTCACTTGGCTGATGTGCT...GGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCCCAGCCCTTTCTGACTaGAGCTTGAGAAGAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: TGFLHGSFYYKFSPTTLPPALSD*SLRRSV Trigger: CACACTTCTTCTCAAGCTTCAGTCAGAAAGGGCTGG...GGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR GCA 90 bp | GGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTGGAAAGACTCTAGGATGCTaGTGCTGTAAGTACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GSCTAAFIINSLPLPSPGKTLGC*CCKYWA Trigger: GGCCCAGTACTTACAGCAGCAGCATCCTAGAGTCTT...TCCAGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CCA 90 bp | GCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGACTGAAGGCCCTGGAGGTTTaGGTTCTTTGGTTGGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: ACLFLWIIVDSSGILKGLKALEV*VLWLGV Trigger: GACGCCCAACCAAAGAACCCAAACCTCCAGGGCCTT...CAGTCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | TCCCTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTAAGGCCCTGGAGGTTTaGGTTCTTTGGTTGGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: SLHTGFLHGSFYYKFSPTKALEV*VLWLGV Trigger: GACGCCCAACCAAAGAACCCAAACCTCCAGGGCCTT...AGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CCA 90 bp | CTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCAGGATGGCGCTACAGTaGAAGGGCAGAGTGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: LHTGFLHGSFYYKFSPTTRMALQ*KGRVAS Trigger: TGATGCCACTCTGCCCTTCCACTGTAGCGCCATCCT...GGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR TCA 90 bp | ATACACCAGGAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGCCCATTTTGGATATTCTaGATCAGTTTGGCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IHQESESLTWIYSGVPQCPFWIF*ISLALQ Trigger: CTGGAGGGCCAAACTGATTCAGAATATCCAAAATGG...GCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTCCTGGTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR TCA 90 bp | ATGGTACATTCTCAAAGAGGAGTGGGAGGCCTCTCAACTCAGCTGTTTCTCTCAAGTCAGCAGCAGATGTaGCGAACTCAAGACTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: MVHSQRGVGGLSTQLFLSSQQQM*RTQDSR Trigger: CCTAGAGTCTTGAGTTCGTCACATCTGCTGCTGACT...TGAGAGAAACAGCTGAGTTGAGAGGCCTCCCACTCCTCTTTGAGAATGTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR TCA 90 bp | GAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGCATTTCTTCTCCAGCCCTTTCTGACTaGAGCTTGAGAAGAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ESESLTWIYSGVPQCISSPALSD*SLRRSV Trigger: CACACTTCTTCTCAAGCTTCAGTCAGAAAGGGCTGG...AGAAGAAATGCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR TCA 90 bp | GGATTCTTAAGGGACTGTAACCAGTGTCCCCTCAGTGATAAGATGGTACATTCTGCAGGTCAAGTCTGCTaGGCTCTTCAGCCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GFLRDCNQCPLSDKMVHSAGQVC*ALQPSL Trigger: GAGACTTGGCTGAAGAGCTCAGCAGACTTGACCTGC...AGAATGTACCATCTTATCACTGAGGGGACACTGGTTACAGTCCCTTAAGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR GCA 90 bp | ATGGTACATTCTCAAAGAGGAGTGGGAGGCCTCTCAACTCAGCTGTTTCTCTCAAAGACTCTAGGATGCTaGTGCTGTAAGTACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: MVHSQRGVGGLSTQLFLSKTLGC*CCKYWA Trigger: GGCCCAGTACTTACAGCAGCAGCATCCTAGAGTCTT...TGAGAGAAACAGCTGAGTTGAGAGGCCTCCCACTCCTCTTTGAGAATGTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR GCA 90 bp | ATGGCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGATCTTCCATGTCATCCTaGTCCACGCCAGCGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: MACLFLWIIVDSSGILKGSSMSS*STPASM Trigger: CATGGACGCTGGCGTGGAGCAGGATGACATGGAAGA...TCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | AATACACCAGGAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGAGTGGAAGGGCAGAGTaGCATCATAATGTAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NTPGVRKSDLDLLWSSPVSGRAE*HHNVGK Trigger: CTTCCCTACATTATGATGCCACTCTGCCCTTCCACT...CACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTCCTGGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTTTGAGCTTACTGGTGTaGCTAGCTCTGTCTATGCCT | + |
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Preference number: 4 (lower is better) Translates to: LGSCTAAFIINSLPLPSPLSLLV*LALSMP Trigger: AGGCATAGACAGAGCTAGCCACACCAGTAAGCTCAA...AGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CCA 90 bp | GCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGACTGGAAGAAGTGTGGGTATaGAGGAGCCACTTTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ACLFLWIIVDSSGILKGLEEVWV*RSHFAG Trigger: CCCTGCAAAGTGGCTCCTCCATACCCACACTTCTTC...CAGTCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | CTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCGAAGAAGTGTGGGTATaGAGGAGCCACTTTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LHTGFLHGSFYYKFSPTTEEVWV*RSHFAG Trigger: CCCTGCAAAGTGGCTCCTCCATACCCACACTTCTTC...GGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| 3UTR CAA 72 bp | GTCCTGGGCCTATGGCATGCCTCTTTCTTTGGATCATaGTGGACTCTTCAGGGATTCTTAAGGGACTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: VLGLWHASFFGS*WTLQGFLRDCN Trigger: GTTACAGTCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCATAGGCCCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR TCA 90 bp | GTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGCATTTCTTCTTTAGCACATCAGCCAAGTaGGCCATGGTAACCATTGAG | + |
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Preference number: 4 (lower is better) Translates to: VRKSDLDLLWSSPVHFFFSTSAK*AMVTIE Trigger: CTCAATGGTTACCATGGCTCACTTGGCTGATGTGCT...AAAGAAGAAATGCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR TCA 90 bp | CCCTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTAAGTCAGCAGCAGATGTaGCGAACTCAAGACTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: PYTLGSCTAAFIINSLPLSQQQM*RTQDSR Trigger: CCTAGAGTCTTGAGTTCGTCACATCTGCTGCTGACT...TAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR GCA 90 bp | TTAGAGAATACACCAGGAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCGGGGATGATTGCTTCTaGTGTCACCACCTTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LENTPGVRKSDLDLLWSSGDDCF*CHHLFP Trigger: GGGAAAAAGGTGGTGACAGCAGAAGCAATCATCCCC...GGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTCCTGGTGTATTCTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | GAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGCATTTCTTCTTGCTGCTGTAAGTACTaGGCCAAGACTTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ESESLTWIYSGVPQCISSCCCKY*AKTSSP Trigger: TGGAGAAGAAGTCTTGGCCCAGTACTTACAGCAGCA...AGAAGAAATGCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | ATGGCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGACCTGTCTCCCCATCATaGTGGTACTTGTGGATCACA | + |
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Preference number: 4 (lower is better) Translates to: MACLFLWIIVDSSGILKGPVSPS*WYLWIT Trigger: TGTGATCCACAAGTACCACCATGATGGGGAGACAGG...TCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | TACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCAGTGGAAGGGCAGAGTaGCATCATAATGTAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: YTLGSCTAAFIINSLPLPSGRAE*HHNVGK Trigger: CTTCCCTACATTATGATGCCACTCTGCCCTTCCACT...GGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CCA 90 bp | TTAGAGAATACACCAGGAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCTTGAGCTTACTGGTGTaGCTAGCTCTGTCTATGCCT | + |
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Preference number: 4 (lower is better) Translates to: LENTPGVRKSDLDLLWSSLSLLV*LALSMP Trigger: AGGCATAGACAGAGCTAGCCACACCAGTAAGCTCAA...GGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTCCTGGTGTATTCTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CCA 90 bp | CTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCTGCTGCTGTAAGTACTaGGCCAAGACTTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LHTGFLHGSFYYKFSPTTCCCKY*AKTSSP Trigger: TGGAGAAGAAGTCTTGGCCCAGTACTTACAGCAGCA...GGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR TCA 90 bp | TCCCTACACACTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTTCAGATCCATTAGGATaGGTCGAGGCGTATAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SLHTGFLHGSFYYKFSPTSDPLG*VEAYRF Trigger: AAACCTATACGCCTCGACTCATCCTAATGGATCTGA...AGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAGTGTGTAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR TCA 90 bp | GGATTCTTAAGGGACTGTAACCAGTGTCCCCTCAGTGATAAGATGGTACATTCTTCAGATCCATTAGGATaGGTCGAGGCGTATAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: GFLRDCNQCPLSDKMVHSSDPLG*VEAYRF Trigger: AAACCTATACGCCTCGACTCATCCTAATGGATCTGA...AGAATGTACCATCTTATCACTGAGGGGACACTGGTTACAGTCCCTTAAGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS GCA 90 bp | GGAGTCAGCAGCAGATGTGACGAACTCAAGACTCTAGGATGCTGCTaGTGTAAGTACTGGGCCAAGACTTCTTCTCCAGAGGCGCATGCG | + |
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Preference number: 5 (lower is better) Translates to: GVSSRCDELKTLGCC*CKYWAKTSSPEAHA Trigger: CGCATGCGCCTCTGGAGAAGAAGTCTTGGCCCAGTACTTACAGCAGCAGCATCCTAGAGTCTTGAGTTCGTCACATCTGCTGCTGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107494.8 ENSMUST00000126245.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTTGTAGGGAAGGGAAGTaGACAGGCGGCTTGGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: LGSCTAAFIINSLPLPSPCREGK*TGGLGR Trigger: GCGACCCAAGCCGCCTGTCAACTTCCCTTCCCTACA...AGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTGAAGGCCCTGGAGGTTaGGGTTCTTTGGTTGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: LGSCTAAFIINSLPLPSPEGPGG*GSLVGR Trigger: ACGCCCAACCAAAGAACCCAAACCTCCAGGGCCTTC...AGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CAA 90 bp | CAAAGAGGAGTGGGAGGCCTCTCAACTCAGCTGTTTCTCTCAGTTCTGAAAGTATGTAGGGAAGGGAAGTaGACAGGCGGCTTGGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: QRGVGGLSTQLFLSVLKVCREGK*TGGLGR Trigger: GCGACCCAAGCCGCCTGTCAACTTCCCTTCCCTACA...TACTTTCAGAACTGAGAGAAACAGCTGAGTTGAGAGGCCTCCCACTCCTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CAA 90 bp | GGTTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTGGAAGAGGTGTCCCTGGGTaGAGCTTACTGGTGTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: GSCTAAFIINSLPLPSPGRGVPG*SLLVWL Trigger: TAGCCACACCAGTAAGCTCAACCCAGGGACACCTCT...TCCAGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CAA 90 bp | GCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGACTGGAAGGCCCTGGAGGTTaGGGTTCTTTGGTTGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: ACLFLWIIVDSSGILKGLEGPGG*GSLVGR Trigger: ACGCCCAACCAAAGAACCCAAACCTCCAGGGCCTTC...CAGTCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CAA 90 bp | GAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGCATTTCTTCTAGAGGTGTCCCTGGGTaGAGCTTACTGGTGTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: ESESLTWIYSGVPQCISSRGVPG*SLLVWL Trigger: TAGCCACACCAGTAAGCTCAACCCAGGGACACCTCT...AGAAGAAATGCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGCACGGCAGCTTTTATTATAAATTCTCTCCCACTACCCTCCCCTGGACTGTTTGGGTTCTTTGGTaGGGCGTCATCTCTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: FLHGSFYYKFSPTTLPWTVWVLW*GVISVC Trigger: ACACACAGAGATGACGCCCAACCAAAGAACCCAAAC...AGTCCAGGGGAGGGTAGTGGGAGAGAATTTATAATAAAAGCTGCCGTGCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126245.2 |
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| CDS-3UTR CAA 90 bp | ATGGCATGCCTCTTTCTTTGGATCATTGTGGACTCTTCAGGGATTCTTAAGGGAGTTTGGGTTCTTTGGTaGGGCGTCATCTCTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: MACLFLWIIVDSSGILKGVWVLW*GVISVC Trigger: ACACACAGAGATGACGCCCAACCAAAGAACCCAAAC...TCCCTTAAGAATCCCTGAAGAGTCCACAATGATCCAAAGAAAGAGGCATGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS-3UTR CAA 90 bp | GAGTCAGAAAGTCTGACCTGGATCTACTCTGGAGTTCCCCAGTGCATTTCTTCTAAGTCTGACCAGACTTaGATGCTGTTCTCTTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: ESESLTWIYSGVPQCISSKSDQT*MLFSLP Trigger: TGGCAAAGAGAACAGCATCAAAGTCTGGTCAGACTT...AGAAGAAATGCACTGGGGAACTCCAGAGTAGATCCAGGTCAGACTTTCTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS GCA 72 bp | GGCCCTCCAGGCACCGTCACTACTCCGCACTCCCTCTaGACTCAGAAGGCCCTGGAGGTTTGGGTTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GPPGTVTTPHSL*TQKALEVWVLW Trigger: CCAAAGAACCCAAACCTCCAGGGCCTTCTGAGTGCAGAGGGAGTGCGGAGTAGTGACGGTGCCTGGAGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107494.8 ENSMUST00000126245.2 |
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| CDS CCA 72 bp | TGGCTAGCTCTGTCTATGCCTCTGAGCACCACAGACTaGGCAAAGCACCGATGTCCAGCAGAATCCCCGCAT | + |
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Preference number: 6 (lower is better) Translates to: WLALSMPLSTTD*AKHRCPAESPH Trigger: ATGCGGGGATTCTGCTGGACATCGGTGCTTTGCCCAGTCTGTGGTGCTCAGAGGCATAGACAGAGCTAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107494.8 ENSMUST00000126245.2 |
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| CDS GCA 72 bp | CATGAGGGAGGTCCCGAATCTAAGCTGTGTAACTCGTaGAGCATCTCTTCCATGTCATCCTGCTCCACGCCA | + |
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Preference number: 6 (lower is better) Translates to: HEGGPESKLCNS*SISSMSSCSTP Trigger: TGGCGTGGAGCAGGATGACATGGAAGAGATGCTGCACGAGTTACACAGCTTAGATTCGGGACCTCCCTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107494.8 |
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| CDS GCA 72 bp | AGCAGATGTGACGAACTCAAGACTCTAGGATGCTGCTaGTGTAAGTACTGGGCCAAGACTTCTTCTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRCDELKTLGCC*CKYWAKTSSPE Trigger: CTCTGGAGAAGAAGTCTTGGCCCAGTACTTACAGCAGCAGCATCCTAGAGTCTTGAGTTCGTCACATCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107494.8 ENSMUST00000126245.2 |
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| CDS GCA 72 bp | AGCAGCAGATGTGACGAACTCAAGACTCTAGGATGCTaGTGCTGTAAGTACTGGGCCAAGACTTCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSRCDELKTLGC*CCKYWAKTSSP Trigger: TGGAGAAGAAGTCTTGGCCCAGTACTTACAGCAGCAGCATCCTAGAGTCTTGAGTTCGTCACATCTGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107494.8 ENSMUST00000126245.2 |
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| CDS GCA 72 bp | GTCAGCAGCAGATGTGACGAACTCAAGACTCTAGGATaGTGCTGCTGTAAGTACTGGGCCAAGACTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSSRCDELKTLG*CCCKYWAKTSS Trigger: AGAAGAAGTCTTGGCCCAGTACTTACAGCAGCAGCATCCTAGAGTCTTGAGTTCGTCACATCTGCTGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107494.8 ENSMUST00000126245.2 |
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