Pregenerated sensors for MST1R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032584Ensembl transcript IDs: ENSMUST00000035203.9, ENSMUST00000195617.6
Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGGCGGACAGTGGTCCTGTTGCCAGGAGCCAGGACACTCCTTCTaGCGGTCACACCGGTCCCCACACCAGCCACATCCCATGAAGCGC | + |
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Preference number: 1 (lower is better) Translates to: SGGQWSCCQEPGHSF*RSHRSPHQPHPMKR Trigger: GCGCTTCATGGGATGTGGCTGGTGTGGGGACCGGTGTGACCGGCAGAAGGAGTGTCCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR TCA 90 bp | CCCTCCGGGGGCAGCATGATACCGATGAGAGCCAGGATGTTTGGGTaGTGTAGGCCACGCATGAGCAGCCCCTCCCGCAGGAAAGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: PSGGSMIPMRARMFG*CRPRMSSPSRRKAS Trigger: GGAGGCTTTCCTGCGGGAGGGGCTGCTCATGCGTGGCCTACATCACCCAAACATCCTGGCTCTCATCGGTATCATGCTGCCCCCGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR TCA 90 bp | GCACAGCCCGGCTGGTGCCGACAGACAGGCTCTGGCCTTCAAGGGTaGGATAAGTACCCCCAGCCCGCGGGCCAAAGTCAGGTTTTATTG | + |
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Preference number: 1 (lower is better) Translates to: AQPGWCRQTGSGLQG*DKYPQPAGQSQVLL Trigger: CAATAAAACCTGACTTTGGCCCGCGGGCTGGGGGTACTTATCTCACCCTTGAAGGCCAGAGCCTGTCTGTCGGCACCAGCCGGGCTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | CCGGTCACACCGGTCCCCACACCAGCCACATCCCATGAAGCGCTGTaGTCTCAGGCAACGCCAACAGGTGAGAAAATGACGACAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PVTPVPTPATSHEAL*SQATPTGEKMTTAR Trigger: CCTGGCTGTCGTCATTTTCTCACCTGTTGGCGTTGCCTGAGAGCACAGCGCTTCATGGGATGTGGCTGGTGTGGGGACCGGTGTGACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | AGGCCACGCATGAGCAGCCCCTCCCGCAGGAAAGCCTCCACCTCCTaGACCTCTGTAATGCGACTCAGAGACTTGATGGCACAGTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: RPRMSSPSRRKASTS*TSVMRLRDLMAQWV Trigger: GACCCACTGTGCCATCAAGTCTCTGAGTCGCATTACAGAGGTGCAGGAGGTGGAGGCTTTCCTGCGGGAGGGGCTGCTCATGCGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR TCA 90 bp | AGACCTGGTCCCCAGAGGCAAAGAGTAGGTCATTCCCGAGGCGGCTaGCATCCCGATGAACAGGCTGTCCACTGCTGCCCAGGGAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: RPGPQRQRVGHSRGG*HPDEQAVHCCPGRS Trigger: ACTTCTCCCTGGGCAGCAGTGGACAGCCTGTTCATCGGGATGTCAGCCGCCTCGGGAATGACCTACTCTTTGCCTCTGGGGACCAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR TCA 90 bp | CAAGCAGTGAGGCCACTACCTGCTTTACTTCCAGCACTAGGGCTCTaGAGGTGGGTCGTGCCGCTGGGTCAGCCTCCCAGCATCGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: QAVRPLPALLPALGL*RWVVPLGQPPSIEA Trigger: TGCTTCGATGCTGGGAGGCTGACCCAGCGGCACGACCCACCTTCAGAGCCCTAGTGCTGGAAGTAAAGCAGGTAGTGGCCTCACTGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | CGTGAAGCCAGCTGCTCCATCACCCCAGACGCTCAGATTCCCTGTTaGCCACCCCTGAGGGTTTCGGACCACATATTCAGGCAGGCGACA | + |
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Preference number: 1 (lower is better) Translates to: REASCSITPDAQIPC*PPLRVSDHIFRQAT Trigger: TGTCGCCTGCCTGAATATGTGGTCCGAAACCCTCAGGGGTGGGCAACAGGGAATCTGAGCGTCTGGGGTGATGGAGCAGCTGGCTTCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | TGTGACACCCACCGTCTACACAGACCTGCAATGGGACACCATCCTTaGCAAGTTGCAGGGAAGGGGGCAGGGGGCAGATCACCACATCCC | + |
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Preference number: 1 (lower is better) Translates to: CDTHRLHRPAMGHHP*QVAGKGAGGRSPHP Trigger: GGGATGTGGTGATCTGCCCCCTGCCCCCTTCCCTGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGGGTGTCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | GTGACACATAAGATCTGCTCCTCATTGACCTGTTCCAGCCGGCACTaGGTTCCATTGACCAGCACAGCCCGGCTGGTGCCGACAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: VTHKICSSLTCSSRH*VPLTSTARLVPTDR Trigger: CCTGTCTGTCGGCACCAGCCGGGCTGTGCTGGTCAATGGAACCCAGTGCCGGCTGGAACAGGTCAATGAGGAGCAGATCTTATGTGTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | AGGGCTGTACCTGCTCCGGAGGCACACTCCCATCATCCACCGCTCTaGGGCCTACGTTCACATAAGCTGCTGTCAGCTGCACATAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: RAVPAPEAHSHHPPL*GLRSHKLLSAAHSG Trigger: ACCACTATGTGCAGCTGACAGCAGCTTATGTGAACGTAGGCCCCAGAGCGGTGGATGATGGGAGTGTGCCTCCGGAGCAGGTACAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR TCA 90 bp | CCAGAGGCAAAGAGTAGGTCATTCCCGAGGCGGCTGACATCCCGATaGACAGGCTGTCCACTGCTGCCCAGGGAGAAGTTGGACACATAC | + |
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Preference number: 1 (lower is better) Translates to: PEAKSRSFPRRLTSR*TGCPLLPREKLDTY Trigger: GTATGTGTCCAACTTCTCCCTGGGCAGCAGTGGACAGCCTGTTCATCGGGATGTCAGCCGCCTCGGGAATGACCTACTCTTTGCCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | CTGGCTATCTCCACCTGTAGGACACGCCCATCCACAGTGCCCATGTaGGCCACTGTAACATTGCCAAGACGTGTCACATGCAGTGCGGTG | + |
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Preference number: 1 (lower is better) Translates to: LAISTCRTRPSTVPM*ATVTLPRRVTCSAV Trigger: CACCGCACTGCATGTGACACGTCTTGGCAATGTTACAGTGGCCCACATGGGCACTGTGGATGGGCGTGTCCTACAGGTGGAGATAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | ATCAGTACATCCTTGACCTCAGCTAGGAGCATCCTGTCCAGATCCTaGAGCCGGATAGACTCTGTCCGCAGCAGTGGGACACTTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: ISTSLTSARSILSRS*SRIDSVRSSGTLVP Trigger: TGGGACAAGTGTCCCACTGCTGCGGACAGAGTCTATCCGGCTCCAGGATCTGGACAGGATGCTCCTAGCTGAGGTCAAGGATGTACTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | GGTGAACCTGTAGGTCTGCAGGCTCTCCAGTGCCATCCATTTGACTaGCAGGCGAGCATGGCGATGCTGGCGAACACTGTAGTATTCCTT | + |
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Preference number: 1 (lower is better) Translates to: GEPVGLQALQCHPFD*QASMAMLANTVVFL Trigger: AAGGAATACTACAGTGTTCGCCAGCATCGCCATGCTCGCCTGCCAGTCAAATGGATGGCACTGGAGAGCCTGCAGACCTACAGGTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | AGGCGACATCGACGCTGCTGTTGTTCCACAAACTGCCCCGCACACTaGCTGCTCTCCACTGTACTTTGTCCATCATGGAATGATAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: RRHRRCCCSTNCPAH*LLSTVLCPSWNDSV Trigger: CACGCTATCATTCCATGATGGACAAAGTACAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | ACATATTCAGGCAGGCGACATCGACGCTGCTGTTGTTCCACAAACTaGCCCGCACACTGCCTGCTCTCCACTGTACTTTGTCCATCATGG | + |
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Preference number: 1 (lower is better) Translates to: TYSGRRHRRCCCSTN*PAHCLLSTVLCPSW Trigger: CCATGATGGACAAAGTACAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCCTGAATATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | GCCTTCCTGTACAGAGATGCCTTCCACTCGGAAGTGCTTGCCTGCTaGCATGTTGGTGATGACAAGGCTGATGTTTGTAGTCCCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: AFLYRDAFHSEVLAC*HVGDDKADVCSPHC Trigger: GCAGTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTACAGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR TCA 90 bp | GGTGAGATAAGTACCCCCAGCCCGCGGGCCAAAGTCAGGTTTTATTaGTGTCAGCACTGGCTCCACGAAAGAGAAGCCTTCCTGTACAGA | + |
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Preference number: 1 (lower is better) Translates to: GEISTPSPRAKVRFY*CQHWLHEREAFLYR Trigger: TCTGTACAGGAAGGCTTCTCTTTCGTGGAGCCAGTGCTGACATCAATAAAACCTGACTTTGGCCCGCGGGCTGGGGGTACTTATCTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | GAAGCCTTCCTGTACAGAGATGCCTTCCACTCGGAAGTGCTTGCCTaGTGGCATGTTGGTGATGACAAGGCTGATGTTTGTAGTCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: EAFLYRDAFHSEVLA*WHVGDDKADVCSPH Trigger: GTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTACAGGAAGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR TCA 90 bp | CACACAGTCTGCCACAGCGCCCAGCCCGACATACTCAACTTTAACTaGATGTTCTTCAGGTTTCAACTCAACCAGGCCAGCTCTGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: HTVCHSAQPDILNFN*MFFRFQLNQASSEW Trigger: CCACTCAGAGCTGGCCTGGTTGAGTTGAAACCTGAAGAACATTCAGTTAAAGTTGAGTATGTCGGGCTGGGCGCTGTGGCAGACTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | ACAGTGCCCATGTGGGCCACTGTAACATTGCCAAGACGTGTCACATaGAGTGCGGTGACCTTCACTGATCCTAACAGTCCATTGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TVPMWATVTLPRRVT*SAVTFTDPNSPLKR Trigger: CCTCTTCAATGGACTGTTAGGATCAGTGAAGGTCACCGCACTGCATGTGACACGTCTTGGCAATGTTACAGTGGCCCACATGGGCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | GGCATGTTGGTGATGACAAGGCTGATGTTTGTAGTCCCCACTGCCTaGGTGACCAGGGGCTCCAGCTCACATTCAAGTTCCTGTATGAAT | + |
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Preference number: 1 (lower is better) Translates to: GMLVMTRLMFVVPTA*VTRGSSSHSSSCMN Trigger: ATTCATACAGGAACTTGAATGTGAGCTGGAGCCCCTGGTCACCCAGGCAGTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CCA 90 bp | AGCAGTGGGACACTTGTCCCATCCCTACTCTCTGACGATTCTTCATaGTTCGGAGCCCCGGAAGCTGTATCGTTGATGTCAGAGAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SSGTLVPSLLSDDSS*FGAPEAVSLMSESV Trigger: AACACTCTCTGACATCAACGATACAGCTTCCGGGGCTCCGAACCATGAAGAATCGTCAGAGAGTAGGGATGGGACAAGTGTCCCACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR GCA 90 bp | TGTAATGCGACTCAGAGACTTGATGGCACAGTGGGTCTGATTCTGTaGTCCGTCTGTATATTCTCCGTGGTAGACAACACCAAAGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: CNATQRLDGTVGLIL*SVCIFSVVDNTKVA Trigger: GGCCACTTTGGTGTTGTCTACCACGGAGAATATACAGACGGAGCACAGAATCAGACCCACTGTGCCATCAAGTCTCTGAGTCGCATTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGGTGGCTCTGAGAGAGGCCGGGGCTTTGACGTGCTCCTGCAATGCTGAGCAACCAGGCCAGCTCTaGGTGGACTGGGTGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: AGVALREAGALTCSCNAEQPGQL*VDWVGA Trigger: TGCCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTG...CTCAGCATTGCAGGAGCACGTCAAAGCCCCGGCCTCTCTCAGAGCCACCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR TCA 90 bp | TCAACCAGGCCAGCTCTGAGTGGACTGGGTGGGGGCAGGAAGCGAAAACCAGGCACCAGCCACATCCCATaGAGCGCTGTGCTCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: STRPALSGLGGGRKRKPGTSHIP*SAVLSG Trigger: GCCTGAGAGCACAGCGCTTCATGGGATGTGGCTGGT...GCCTGGTTTTCGCTTCCTGCCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CAA 90 bp | GCTGTGAGGATAGAACTCACTGATCTCAGGCGGACAGTGGTCCTGTaGCCAGGAGCCAGGACACTCCTTCTGCCGGTCACACCGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: AVRIELTDLRRTVVL*PGARTLLLPVTPVP Trigger: GGGGACCGGTGTGACCGGCAGAAGGAGTGTCCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGATCAGTGAGTTCTATCCTCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CAA 90 bp | AAGATCTGCTCCTCATTGACCTGTTCCAGCCGGCACTGGGTTCCATaGACCAGCACAGCCCGGCTGGTGCCGACAGACAGGCTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KICSSLTCSSRHWVP*TSTARLVPTDRLWP Trigger: AGGCCAGAGCCTGTCTGTCGGCACCAGCCGGGCTGTGCTGGTCAATGGAACCCAGTGCCGGCTGGAACAGGTCAATGAGGAGCAGATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAGATCTAGTGCCTGTGGCCTACTCAGGGCTTTGGTCAAGTGGGCAGGGGGATGTAGGCCACGCATaGGCAGCCCCTCCCGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LADLVPVAYSGLWSSGQGDVGHA*AAPPAG Trigger: TCCTGCGGGAGGGGCTGCTCATGCGTGGCCTACATC...CCCCTGCCCACTTGACCAAAGCCCTGAGTAGGCCACAGGCACTAGATCTGCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCTCTGAGTGGACTGGGTGGGGGCAGGAAGCGAAAACCAGGCAGCGTGAAATCTCAGGCGGACAGTaGTCCTGTTGCCAGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ASSEWTGWGQEAKTRQREISGGQ*SCCQEP Trigger: TGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGAT...TTCACGCTGCCTGGTTTTCGCTTCCTGCCCCCACCCAGTCCACTCAGAGCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CAA 90 bp | GCCGTGCCAGCTCCAGGAGGCGTGACACATAAGATCTGCTCCTCATaGACCTGTTCCAGCCGGCACTGGGTTCCATTGACCAGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: AVPAPGGVTHKICSS*TCSSRHWVPLTSTA Trigger: GGCTGTGCTGGTCAATGGAACCCAGTGCCGGCTGGAACAGGTCAATGAGGAGCAGATCTTATGTGTCACGCCTCCTGGAGCTGGCACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCCCCTCCGGGGGCAGCATGATACCGATGAGAGCCAGGATGTTTGGGTGATGCCCTGGCCTAGGGCTTaGAGAGTCCTTAGGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KPLRGQHDTDESQDVWVMPWPRA*RVLRQQ Trigger: CTGCTGCCTAAGGACTCTTCAAGCCCTAGGCCAGGG...CATCACCCAAACATCCTGGCTCTCATCGGTATCATGCTGCCCCCGGAGGGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR GCA 90 bp | ATCGACGCTGCTGTTGTTCCACAAACTGCCCCGCACACTGCCTGCTCTCCACTGGGACAGTGGTCCTGTTaGCAGGAGCCAGGACACTCC | + |
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Preference number: 2 (lower is better) Translates to: IDAAVVPQTAPHTACSPLGQWSC*QEPGHS Trigger: GGAGTGTCCTGGCTCCTGGCAACAGGACCACTGTCC...CAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCCTCCGGGGGCAGCATGATACCGATGAGAGCCAGGATGTTTGGGTGATGCAGGCTGTCCACTGCTaGCCAGGGAGAAGTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: KPLRGQHDTDESQDVWVMQAVHC*PGRSWT Trigger: TGTCCAACTTCTCCCTGGGCAGCAGTGGACAGCCTG...CATCACCCAAACATCCTGGCTCTCATCGGTATCATGCTGCCCCCGGAGGGGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCCTCCGGGGGCAGCATGATACCGATGAGAGCCAGGATGTTTGGGTGATGGAACAGGCTGTCCACTaGTGCCCAGGGAGAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: KPLRGQHDTDESQDVWVMEQAVH*CPGRSW Trigger: CCAACTTCTCCCTGGGCAGCAGTGGACAGCCTGTTC...CATCACCCAAACATCCTGGCTCTCATCGGTATCATGCTGCCCCCGGAGGGGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAGCCCGCGGGCCAAAGTCAGGTTTTATTGATGTCAGCACTGGCTCCACGGTCACTGGCTCATGCTaGAACGAGGGGCTCAAATGG | + |
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Preference number: 2 (lower is better) Translates to: PPARGPKSGFIDVSTGSTVTGSC*NEGLKW Trigger: CCATTTGAGCCCCTCGTTCCAGCATGAGCCAGTGAC...CGTGGAGCCAGTGCTGACATCAATAAAACCTGACTTTGGCCCGCGGGCTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR CCA 90 bp | GACACCCACCGTCTACACAGACCTGCAATGGGACACCATCCTTGCCAAGTTGCACGACAGCCAGGGCCCTaGATGGGCACCTTGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: DTHRLHRPAMGHHPCQVARQPGP*MGTLKT Trigger: GGTCTTCAAGGTGCCCATCCAGGGCCCTGGCTGTCG...TGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGATCATGATGTGGGAGCCACTGTAGCCACACTTGGGACTGATGTCCAAGTAGTCCCCACTGCCTaGGTGACCAGGGGCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: AMDHDVGATVATLGTDVQVVPTA*VTRGSS Trigger: GCTGGAGCCCCTGGTCACCCAGGCAGTGGGGACTAC...TTGGACATCAGTCCCAAGTGTGGCTACAGTGGCTCCCACATCATGATCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CAA 90 bp | AGGGTTTCGGACCACATATTCAGGCAGGCGACATCGACGCTGCTGTaGTTCCACAAACTGCCCCGCACACTGCCTGCTCTCCACTGTACT | + |
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Preference number: 2 (lower is better) Translates to: RVSDHIFRQATSTLL*FHKLPRTLPALHCT Trigger: AGTACAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCCTGAATATGTGGTCCGAAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR TCA 90 bp | AGGATAGAACTCACTGATCTCAGGCGGACAGTGGTCCTGTTGCCAGGAGCCAGGGGCAACGCCAACAGGTaGGAAAATGACGACAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RIELTDLRRTVVLLPGARGNANR*ENDDSQ Trigger: CTGGCTGTCGTCATTTTCTCACCTGTTGGCGTTGCC...CCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGATCAGTGAGTTCTATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR GCA 90 bp | GGCAACGGCCAGCACAGCCACAAGCAGGATCAAGACCAGAAGAGCAATAAGGAGGCTCAGATTCCCTGTTaGCCACCCCTGAGGGTTTCG | + |
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Preference number: 2 (lower is better) Translates to: GNGQHSHKQDQDQKSNKEAQIPC*PPLRVS Trigger: CGAAACCCTCAGGGGTGGGCAACAGGGAATCTGAGC...CTCCTTATTGCTCTTCTGGTCTTGATCCTGCTTGTGGCTGTGCTGGCCGTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCTTCAGGTTTCAACTCAACCAGGCCAGCTCTGAGTGGACTGGGTGGGGGAACGAGGGGCTCAAATaGGCCCGGTTTCCCACCTTC | + |
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Preference number: 2 (lower is better) Translates to: MFFRFQLNQASSEWTGWGNEGLK*ARFPTF Trigger: GAAGGTGGGAAACCGGGCCCATTTGAGCCCCTCGTT...CCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTGAGTTGAAACCTGAAGAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR CAA 90 bp | TGTAGGACACGCCCATCCACAGTGCCCATGTGGGCCACTGTAACATaGCCAAGACGTGTCACATGCAGTGCGGTGACCTTCACTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: CRTRPSTVPMWATVT*PRRVTCSAVTFTDP Trigger: AGGATCAGTGAAGGTCACCGCACTGCATGTGACACGTCTTGGCAATGTTACAGTGGCCCACATGGGCACTGTGGATGGGCGTGTCCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR TCA 90 bp | GACACCCACCGTCTACACAGACCTGCAATGGGACACCATCCTTGCCAAGTTGCACGTGAAGTGCCATGCTaGAGTCAGATGCTGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: DTHRLHRPAMGHHPCQVAREVPC*SQMLAM Trigger: CATGGCCAGCATCTGACTTCAGCATGGCACTTCACG...TGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR CCA 90 bp | ATCGACGCTGCTGTTGTTCCACAAACTGCCCCGCACACTGCCTGCTCTCCACTGGTTTCCCACCTTCAGTaGCCCCAGAAAGCTAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: IDAAVVPQTAPHTACSPLVSHLQ*PQKAKE Trigger: CTCTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAAC...CAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| 3UTR-3UTR CCA 90 bp | AGGATAGAACTCACTGATCTCAGGCGGACAGTGGTCCTGTTGCCAGGAGCCAGGTCCACAGTGCCCATGTaGGCCACTGTAACATTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RIELTDLRRTVVLLPGARSTVPM*ATVTLP Trigger: TGGCAATGTTACAGTGGCCCACATGGGCACTGTGGA...CCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGATCAGTGAGTTCTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CAA 90 bp | TGTACAGAGATGCCTTCCACTCGGAAGTGCTTGCCTGCTGGCATGTaGGTGATGACAAGGCTGATGTTTGTAGTCCCCACTGCCTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CTEMPSTRKCLPAGM*VMTRLMFVVPTAWV Trigger: CACCCAGGCAGTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCAGATCTAGTGCCTGTGGCCTACTCAGGGCTTTGGTCAAGTGGGCAGGGGCACCTTGACTGTGAATaGCTCGTCCAGCATGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LADLVPVAYSGLWSSGQGHLDCE*LVQHAV Trigger: AACTGCATGCTGGACGAGTCATTCACAGTCAAGGTG...CCCCTGCCCACTTGACCAAAGCCCTGAGTAGGCCACAGGCACTAGATCTGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR GCA 90 bp | GCCTGCTGGCATGTTGGTGATGACAAGGCTGATGTTTGTAGTCCCCACTGCCTGCCAAGACGTGTCACATaGAGTGCGGTGACCTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: ACWHVGDDKADVCSPHCLPRRVT*SAVTFT Trigger: AGTGAAGGTCACCGCACTGCATGTGACACGTCTTGG...CAGGCAGTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAGCACAGCCACAAGCAGGATCAAGACCAGAAGAGCAATAAGGAGTATCCTGCCCCGCACACTGCCTaGTCTCCACTGTACTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GQHSHKQDQDQKSNKEYPAPHTA*SPLYFV Trigger: GACAAAGTACAGTGGAGAGCAGGCAGTGTGCGGGGC...AGGATACTCCTTATTGCTCTTCTGGTCTTGATCCTGCTTGTGGCTGTGCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGATAGAACTCACTGATCTCAGGCGGACAGTGGTCCTGTTGCCAGGAGCCAGGACTGTAGTATCTCTGTaGTCACTGCTGGATCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RIELTDLRRTVVLLPGARTVVSL*SLLDPL Trigger: CAGAGGATCCAGCAGTGATCACAGAGATACTACAGT...CCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGATCAGTGAGTTCTATCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR CCA 90 bp | GACACCCACCGTCTACACAGACCTGCAATGGGACACCATCCTTGCCAAGTTGCAGAAGTGCTTGCCTGCTaGCATGTTGGTGATGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: DTHRLHRPAMGHHPCQVAEVLAC*HVGDDK Trigger: CTTGTCATCACCAACATGCCAGCAGGCAAGCACTTC...TGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTCTTCAGGTTTCAACTCAACCAGGCCAGCTCTGAGTGGACTGGGTGGGGGGCTGAAGTCAGATGCTaGCCATGGATCATGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: MFFRFQLNQASSEWTGWGAEVRC*PWIMMW Trigger: CCACATCATGATCCATGGCCAGCATCTGACTTCAGC...CCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTGAGTTGAAACCTGAAGAACAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR GCA 90 bp | AGGATAGAACTCACTGATCTCAGGCGGACAGTGGTCCTGTTGCCAGGAGCCAGGAGGCAGCTTGTAATTTaGTCAAGGCCACTTAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RIELTDLRRTVVLLPGARRQLVI*SRPLSR Trigger: TCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT...CCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGATCAGTGAGTTCTATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CAA 90 bp | TGGTCAGTATGGATGACCACTTGTTCATGGGGAATCAGTACATCCTaGACCTCAGCTAGGAGCATCCTGTCCAGATCCTGGAGCCGGATA | + |
|
Preference number: 2 (lower is better) Translates to: WSVWMTTCSWGISTS*TSARSILSRSWSRI Trigger: TATCCGGCTCCAGGATCTGGACAGGATGCTCCTAGCTGAGGTCAAGGATGTACTGATTCCCCATGAACAAGTGGTCATCCATACTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR CCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAACGAGGGGCTCAAATaGGCCCGGTTTCCCACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HCSISVITAGSSVFRNRYNEGLK*ARFPTF Trigger: GAAGGTGGGAAACCGGGCCCATTTGAGCCCCTCGTT...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| 3UTR CAA 90 bp | AAAGAGAAGCCTTCCTGTACAGAGATGCCTTCCACTCGGAAGTGCTaGCCTGCTGGCATGTTGGTGATGACAAGGCTGATGTTTGTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: KEKPSCTEMPSTRKC*PAGMLVMTRLMFVV Trigger: GACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTACAGGAAGGCTTCTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACAGGCAGCTTGTAATTTaGTCAAGGCCACTTAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISVITAGSSVFRNRYKTDRQLVI*SRPLSR Trigger: TCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | CAGTGGTCCTGTTGCCAGGAGCCAGGACACTCCTTCTaGCGGTCACACCGGTCCCCACACCAGCCACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: QWSCCQEPGHSF*RSHRSPHQPHP Trigger: GGGATGTGGCTGGTGTGGGGACCGGTGTGACCGGCAGAAGGAGTGTCCTGGCTCCTGGCAACAGGACCACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | GCAGGGGTGGCTCTGAGAGAGGCCGGGGCTTTGACGTaGTCCTGCAATGCTGAGGCGAGGGCTGTACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGVALREAGALT*SCNAEARAVPA Trigger: AGCAGGTACAGCCCTCGCCTCAGCATTGCAGGAGCACGTCAAAGCCCCGGCCTCTCTCAGAGCCACCCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | GGCTGGTGCCGACAGACAGGCTCTGGCCTTCAAGGGTaGGATAAGTACCCCCAGCCCGCGGGCCAAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GWCRQTGSGLQG*DKYPQPAGQSQ Trigger: CTGACTTTGGCCCGCGGGCTGGGGGTACTTATCTCACCCTTGAAGGCCAGAGCCTGTCTGTCGGCACCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | CCCCAGAGGCAAAGAGTAGGTCATTCCCGAGGCGGCTaGCATCCCGATGAACAGGCTGTCCACTGCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PQRQRVGHSRGG*HPDEQAVHCCP Trigger: TGGGCAGCAGTGGACAGCCTGTTCATCGGGATGTCAGCCGCCTCGGGAATGACCTACTCTTTGCCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | GGCAGCATGATACCGATGAGAGCCAGGATGTTTGGGTaGTGTAGGCCACGCATGAGCAGCCCCTCCCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSMIPMRARMFG*CRPRMSSPSRR Trigger: CCTGCGGGAGGGGCTGCTCATGCGTGGCCTACATCACCCAAACATCCTGGCTCTCATCGGTATCATGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | GGGCAGGAAGCGAAAACCAGGCAGCGTGAAGCCAGCTaGTCCATCACCCCAGACGCTCAGATTCCCTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GQEAKTRQREAS*SITPDAQIPCC Trigger: GCAACAGGGAATCTGAGCGTCTGGGGTGATGGAGCAGCTGGCTTCACGCTGCCTGGTTTTCGCTTCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | AAGATCTGCTCCTCATTGACCTGTTCCAGCCGGCACTaGGTTCCATTGACCAGCACAGCCCGGCTGGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: KICSSLTCSSRH*VPLTSTARLVP Trigger: CGGCACCAGCCGGGCTGTGCTGGTCAATGGAACCCAGTGCCGGCTGGAACAGGTCAATGAGGAGCAGATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGGAGCTCATGTTGGCAGACCTCACCACCCACGGTCATGTTCACAGTCACACACGGACAGTGGTCCTGTaGCCAGGAGCCAGGACACTC | + |
|
Preference number: 3 (lower is better) Translates to: PELMLADLTTHGHVHSHTRTVVL*PGARTL Trigger: GAGTGTCCTGGCTCCTGGCAACAGGACCACTGTCCG...TGTGTGACTGTGAACATGACCGTGGGTGGTGAGGTCTGCCAACATGAGCTCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | ACCTGTAGGTCTGCAGGCTCTCCAGTGCCATCCATTTaGCTGGCAGGCGAGCATGGCGATGCTGGCGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: TCRSAGSPVPSI*LAGEHGDAGEH Trigger: GTGTTCGCCAGCATCGCCATGCTCGCCTGCCAGTCAAATGGATGGCACTGGAGAGCCTGCAGACCTACAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | CCGGTCCCCACACCAGCCACATCCCATGAAGCGCTGTaGTCTCAGGCAACGCCAACAGGTGAGAAAATGACG | + |
|
Preference number: 3 (lower is better) Translates to: PVPTPATSHEAL*SQATPTGEKMT Trigger: CGTCATTTTCTCACCTGTTGGCGTTGCCTGAGAGCACAGCGCTTCATGGGATGTGGCTGGTGTGGGGACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGCTGGCATGTTGGTGATGACAAGGCTGATGTTTGTAGTCCCCACTGCCTGCCCTGGATGGGCACCTaGAAGACCTGGTCCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ACWHVGDDKADVCSPHCLPWMGT*KTWSPE Trigger: CTCTGGGGACCAGGTCTTCAAGGTGCCCATCCAGGG...CAGGCAGTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | AGCTGCTCCATCACCCCAGACGCTCAGATTCCCTGTTaGCCACCCCTGAGGGTTTCGGACCACATATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCSITPDAQIPC*PPLRVSDHIFR Trigger: CCTGAATATGTGGTCCGAAACCCTCAGGGGTGGGCAACAGGGAATCTGAGCGTCTGGGGTGATGGAGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | ATGAGCAGCCCCTCCCGCAGGAAAGCCTCCACCTCCTaGACCTCTGTAATGCGACTCAGAGACTTGATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: MSSPSRRKASTS*TSVMRLRDLMA Trigger: TGCCATCAAGTCTCTGAGTCGCATTACAGAGGTGCAGGAGGTGGAGGCTTTCCTGCGGGAGGGGCTGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | AATGTCACTGGCTCATGCTGGAACGAGGGGCTCAAATaGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NVTGSCWNEGLK*ARFPTFSGPRK Trigger: CTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTCGTTCCAGCATGAGCCAGTGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | CAGGATGTGACACCCACCGTCTACACAGACCTGCAATaGGACACCATCCTTGCCAAGTTGCAGGGAAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QDVTPTVYTDLQ*DTILAKLQGRG Trigger: CCCCCTTCCCTGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGGGTGTCACATCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | TCCTTGACCTCAGCTAGGAGCATCCTGTCCAGATCCTaGAGCCGGATAGACTCTGTCCGCAGCAGTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SLTSARSILSRS*SRIDSVRSSGT Trigger: TGTCCCACTGCTGCGGACAGAGTCTATCCGGCTCCAGGATCTGGACAGGATGCTCCTAGCTGAGGTCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | GTCAGCCTCCCAGCATCGAAGCATCACGTGATACAGTaGATCAGGACAGTACTCAGGCTGAGGCAGGCGACG | + |
|
Preference number: 3 (lower is better) Translates to: VSLPASKHHVIQ*IRTVLRLRQAT Trigger: CGTCGCCTGCCTCAGCCTGAGTACTGTCCTGATTCACTGTATCACGTGATGCTTCGATGCTGGGAGGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | TTTCGGACCACATATTCAGGCAGGCGACATCGACGCTaGTGTTGTTCCACAAACTGCCCCGCACACTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FRTTYSGRRHRR*CCSTNCPAHCL Trigger: CAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCCTGAATATGTGGTCCGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGGAGCTCATGTTGGCAGACCTCACCACCCACGGTCATGTTCACAGTCACACATGGGCCACTGTAACATaGCCAAGACGTGTCACATGC | + |
|
Preference number: 3 (lower is better) Translates to: PELMLADLTTHGHVHSHTWATVT*PRRVTC Trigger: GCATGTGACACGTCTTGGCAATGTTACAGTGGCCCA...TGTGTGACTGTGAACATGACCGTGGGTGGTGAGGTCTGCCAACATGAGCTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | CTGTATGAATTCCTTGAGGGACCCTGGCCTAGGGCTTaGAGAGTCCTTAGGCAGCAGTCGGCAGGGACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LYEFLEGPWPRA*RVLRQQSAGTL Trigger: CAAAGTCCCTGCCGACTGCTGCCTAAGGACTCTTCAAGCCCTAGGCCAGGGTCCCTCAAGGAATTCATACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | AGTACCCCCAGCCCGCGGGCCAAAGTCAGGTTTTATTaGTGTCAGCACTGGCTCCACGAAAGAGAAGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: STPSPRAKVRFY*CQHWLHEREAF Trigger: GAAGGCTTCTCTTTCGTGGAGCCAGTGCTGACATCAATAAAACCTGACTTTGGCCCGCGGGCTGGGGGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | GATCCTTCACAGTGGGGTTCCTCTGAGGGGAGCGAATaGAATGAAGCAGGTCTCCGTGGCGCATATAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DPSQWGSSEGSE*NEAGLRGAYRA Trigger: TGCCCTATATGCGCCACGGAGACCTGCTTCATTTCATTCGCTCCCCTCAGAGGAACCCCACTGTGAAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | CTGGCTCCACGAAAGAGAAGCCTTCCTGTACAGAGATaGCTTCCACTCGGAAGTGCTTGCCTGCTGGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LAPRKRSLPVQR*LPLGSACLLAC Trigger: ACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTACAGGAAGGCTTCTCTTTCGTGGAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | CTCACCACCCACGGTCATGTTCACAGTCACACAGTCTaGCACAGCGCCCAGCCCGACATACTCAACTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LTTHGHVHSHTV*HSAQPDILNFN Trigger: GTTAAAGTTGAGTATGTCGGGCTGGGCGCTGTGGCAGACTGTGTGACTGTGAACATGACCGTGGGTGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | TTCTGCTCTGCCAGGTACTCCATACCACAGGCTACCTaGAGGCCAAAGCTGACAAGATCCTTCACAGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FCSARYSIPQAT*RPKLTRSFTVG Trigger: CCCCACTGTGAAGGATCTTGTCAGCTTTGGCCTGCAGGTAGCCTGTGGTATGGAGTACCTGGCAGAGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | GTGATGACAAGGCTGATGTTTGTAGTCCCCACTGCCTaGGTGACCAGGGGCTCCAGCTCACATTCAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VMTRLMFVVPTA*VTRGSSSHSSS Trigger: GGAACTTGAATGTGAGCTGGAGCCCCTGGTCACCCAGGCAGTGGGGACTACAAACATCAGCCTTGTCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR-3UTR CAA 90 bp | GACACCCACCGTCTACACAGACCTGCAATGGGACACCATCCTTGCCAAGTTGCAGATCCTAACAGTCCATaGAAGAGGTCCACACGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DTHRLHRPAMGHHPCQVADPNSP*KRSTRV Trigger: CACCCGTGTGGACCTCTTCAATGGACTGTTAGGATC...TGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | AAGCCTTCCTGTACAGAGATGCCTTCCACTCGGAAGTaGTTGCCTGCTGGCATGTTGGTGATGACAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KPSCTEMPSTRK*LPAGMLVMTRL Trigger: CAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTACAGGAAGGCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | ATTCTTCATGGTTCGGAGCCCCGGAAGCTGTATCGTTaGTGTCAGAGAGTGTTGTTGGGGAGAGGGAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ILHGSEPRKLYR*CQRVLLGRGSE Trigger: CTCACTCCCTCTCCCCAACAACACTCTCTGACATCAACGATACAGCTTCCGGGGCTCCGAACCATGAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | TGCCACAGCGCCCAGCCCGACATACTCAACTTTAACTaGATGTTCTTCAGGTTTCAACTCAACCAGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CHSAQPDILNFN*MFFRFQLNQAS Trigger: GCTGGCCTGGTTGAGTTGAAACCTGAAGAACATTCAGTTAAAGTTGAGTATGTCGGGCTGGGCGCTGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | ATGTGGGCCACTGTAACATTGCCAAGACGTGTCACATaGAGTGCGGTGACCTTCACTGATCCTAACAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MWATVTLPRRVT*SAVTFTDPNSP Trigger: TGGACTGTTAGGATCAGTGAAGGTCACCGCACTGCATGTGACACGTCTTGGCAATGTTACAGTGGCCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | CTGTACAGAGATGCCTTCCACTCGGAAGTGCTTGCCTaGTGGCATGTTGGTGATGACAAGGCTGATGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LYRDAFHSEVLA*WHVGDDKADVC Trigger: ACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | GCTGCTGTTGTTCCACAAACTGCCCCGCACACTGCCTaGTCTCCACTGTACTTTGTCCATCATGGAATGATA | + |
|
Preference number: 3 (lower is better) Translates to: AAVVPQTAPHTA*SPLYFVHHGMI Trigger: TATCATTCCATGATGGACAAAGTACAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | ACACTTGTCCCATCCCTACTCTCTGACGATTCTTCATaGTTCGGAGCCCCGGAAGCTGTATCGTTGATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TLVPSLLSDDSS*FGAPEAVSLMS Trigger: TGACATCAACGATACAGCTTCCGGGGCTCCGAACCATGAAGAATCGTCAGAGAGTAGGGATGGGACAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR GCA 72 bp | ACTCAGAGACTTGATGGCACAGTGGGTCTGATTCTGTaGTCCGTCTGTATATTCTCCGTGGTAGACAACACC | + |
|
Preference number: 3 (lower is better) Translates to: TQRLDGTVGLIL*SVCIFSVVDNT Trigger: GGTGTTGTCTACCACGGAGAATATACAGACGGAGCACAGAATCAGACCCACTGTGCCATCAAGTCTCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | TACAGAGATGCCTTCCACTCGGAAGTGCTTGCCTGCTaGCATGTTGGTGATGACAAGGCTGATGTTTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: YRDAFHSEVLAC*HVGDDKADVCS Trigger: ACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCATCTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR TCA 72 bp | TCTCCACTGTACTTTGTCCATCATGGAATGATAGCGTaGAGTGCCATGCTGAAGTCAGATGCTGGCCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPLYFVHHGMIA*SAMLKSDAGHG Trigger: TCCATGGCCAGCATCTGACTTCAGCATGGCACTTCACGCTATCATTCCATGATGGACAAAGTACAGTGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CCA 72 bp | CAGACATTACATAAATACATGCTACAAAAATGTCACTaGCTCATGCTGGAACGAGGGGCTCAAATGGGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: QTLHKYMLQKCH*LMLERGAQMGP Trigger: CGGGCCCATTTGAGCCCCTCGTTCCAGCATGAGCCAGTGACATTTTTGTAGCATGTATTTATGTAATGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | TCAACCAGGCCAGCTCTGAGTGGACTGGGTGGGGGCAGGAAGCGAAAACCAGGCCGAGGCTCCAGCTCATaGAGGAAGCAGCGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STRPALSGLGGGRKRKPGRGSSS*RKQRPC Trigger: ACAGGGCCGCTGCTTCCTGCATGAGCTGGAGCCTCG...GCCTGGTTTTCGCTTCCTGCCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | CCAGGACACTCCTTCTGCCGGTCACACCGGTCCCCACACCAGCCACATCCCATGTGGAGCAGAGTGGGCTaGCTGAAGCACTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHSFCRSHRSPHQPHPMWSRVG*LKHWVG Trigger: CCCTACCCAGTGCTTCAGGCAGCCCACTCTGCTCCA...CATGGGATGTGGCTGGTGTGGGGACCGGTGTGACCGGCAGAAGGAGTGTCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGGGTGGGTCGTGCCGCTaGGTCAGCCTCCCAGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKGGSCR*VSLPAS Trigger: CGATGCTGGGAGGCTGACCCAGCGGCACGACCCACC...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | TCGACGCTGCTGTTGTTCCACAAACTGCCCCGCACACTGCCTGCTCTCCACTGTACTGTCCTCGTAGGCTaGGGTGGCCTGTACCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STLLLFHKLPRTLPALHCTVLVG*GGLYPA Trigger: GGCCGGGTACAGGCCACCGCAGCCTACGAGGACAGT...ACAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCCCACGGTGATCTGGTGTGTTCCCTCAGGTACGACATCATCAGGTCGCAGTGGCAACGGGAGCTaGGGCCGGAGGCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWPTVIWCVPSGTTSSGRSGNGS*GRRPLH Trigger: GTGGAGAGGCCTCCGGCCCCAGCTCCCGTTGCCACT...GCGACCTGATGATGTCGTACCTGAGGGAACACACCAGATCACCGTGGGCCAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGCCAGCACAGCCCGGCTaGTGCCGACAGACAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKPAQPG*CRQTGS Trigger: AGAGCCTGTCTGTCGGCACCAGCCGGGCTGTGCTGG...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| 3UTR CAA 72 bp | TCCTCATTGACCTGTTCCAGCCGGCACTGGGTTCCATaGACCAGCACAGCCCGGCTGGTGCCGACAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLTCSSRHWVP*TSTARLVPTDR Trigger: CCTGTCTGTCGGCACCAGCCGGGCTGTGCTGGTCAATGGAACCCAGTGCCGGCTGGAACAGGTCAATGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CAA 72 bp | CCACCGTCTACACAGACCTGCAATGGGACACCATCCTaGCCAAGTTGCAGGGAAGGGGGCAGGGGGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PPSTQTCNGTPS*PSCREGGRGQI Trigger: GATCTGCCCCCTGCCCCCTTCCCTGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | GATTCCCTGTTGCCCACCCCTGAGGGTTTCGGACCACATATTCAGGCAGGCGACCCAAGCACGTGCAGGTaGTTGCGTGTGGCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSLLPTPEGFGPHIQAGDPSTCR*LRVATN Trigger: GTTTGTGGCCACACGCAATCACCTGCACGTGCTTGG...GTCGCCTGCCTGAATATGTGGTCCGAAACCCTCAGGGGTGGGCAACAGGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | GGCTCCACGAAAGAGAAGCCTTCCTGTACAGAGATGCCTTCCACTCGGAAGTGCGGGTTGAGCCACAGCTaGCCAGGGCTGGCAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSTKEKPSCTEMPSTRKCGLSHS*PGLANL Trigger: CAGGTTTGCCAGCCCTGGTCAGCTGTGGCTCAACCC...GCACTTCCGAGTGGAAGGCATCTCTGTACAGGAAGGCTTCTCTTTCGTGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | CCAGGACACTCCTTCTGCCGGTCACACCGGTCCCCACACCAGCCACATCCCATGCGTTTAGGTGCAAAATaGCAGTCCAAGACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGHSFCRSHRSPHQPHPMRLGAK*QSKTSS Trigger: GGAGCTGGTCTTGGACTGTCATTTTGCACCTAAACG...CATGGGATGTGGCTGGTGTGGGGACCGGTGTGACCGGCAGAAGGAGTGTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGGAGCAGCACCCCGAATaGCCACACATCGGACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKEQHPE*PHIGLG Trigger: ACCAAGTCCGATGTGTGGTCATTCGGGGTGCTGCTC...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGCAGGCTGTCCACTGCTaGCCAGGGAGAAGTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKQAVHC*PGRSWT Trigger: TGTCCAACTTCTCCCTGGGCAGCAGTGGACAGCCTG...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTTCAGGTTTCAACTCAACCAGGCCAGCTCTGAGTGGACTGGGTGGGGGACTGCCAGTTCAGGTTaGTGGACGCCGCCGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MFFRFQLNQASSEWTGWGTASSG*WTPPTA Trigger: GGCTGTCGGCGGCGTCCACCAACCTGAACTGGCAGT...CCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTGAGTTGAAACCTGAAGAACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGTGTTGTTCCACAAACTaGCCCGCACACCTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKCCSTN*PAHLLS Trigger: GGAGAGCAGGTGTGCGGGGCAGTTTGTGGAACAACA...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | TTAGCAGATCTAGTGCCTGTGGCCTACTCAGGGCTTTGGTCAAGTGGGCAGGGGCAGCTCGCACAAGTCTaGCAGCCAGGGTTCCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LADLVPVAYSGLWSSGQGQLAQV*QPGFPI Trigger: TATCGGGAACCCTGGCTGCCAGACTTGTGCGAGCTG...CCCCTGCCCACTTGACCAAAGCCCTGAGTAGGCCACAGGCACTAGATCTGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGTGTTCCAGCCGGCACTaGGTTCCATTGACCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKCSSRH*VPLTST Trigger: TGTGCTGGTCAATGGAACCCAGTGCCGGCTGGAACA...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGCAAGATCCTTCACAGTaGGGTTCCTCTGAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKQDPSQ*GSSEGS Trigger: GCTCCCCTCAGAGGAACCCCACTGTGAAGGATCTTG...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| 3UTR CAA 72 bp | CGCCCATCCACAGTGCCCATGTGGGCCACTGTAACATaGCCAAGACGTGTCACATGCAGTGCGGTGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPSTVPMWATVT*PRRVTCSAVTF Trigger: GAAGGTCACCGCACTGCATGTGACACGTCTTGGCAATGTTACAGTGGCCCACATGGGCACTGTGGATGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| 3UTR CAA 72 bp | GACCACATATTCAGGCAGGCGACATCGACGCTGCTGTaGTTCCACAAACTGCCCCGCACACTGCCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DHIFRQATSTLL*FHKLPRTLPAL Trigger: GAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCCTGAATATGTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTAACTGTCCTCGTAGGCTaGGGTGGCCTGTACCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLTVLVG*GGLYPA Trigger: GGCCGGGTACAGGCCACCGCAGCCTACGAGGACAGT...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | TCGACGCTGCTGTTGTTCCACAAACTGCCCCGCACACTGCCTGCTCTCCACTGTCCTGGCCCTCTGAAATaGTCAGTTCCACAGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STLLLFHKLPRTLPALHCPGPLK*SVPQPV Trigger: AACTGGCTGTGGAACTGAGCATTTCAGAGGGCCAGG...ACAGTGGAGAGCAGGCAGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGTCGGAAGTGCTTGCCTaGTGGCATGTTGGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKSEVLA*WHVGDD Trigger: GTCATCACCAACATGCCAGCAGGCAAGCACTTCCGA...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| 3UTR CAA 72 bp | ATAGAACTCACTGATCTCAGGCGGACAGTGGTCCTGTaGCCAGGAGCCAGGACACTCCTTCTGCCGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IELTDLRRTVVL*PGARTLLLPVT Trigger: TGTGACCGGCAGAAGGAGTGTCCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGATCAGTGAGTTCTAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | GCCATGGATCATGATGTGGGAGCCACTGTAGCCACACTTGGGACTGATGTCCAAAGCAGAAGAGAGGATTaGAGCAGCGGCAGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AMDHDVGATVATLGTDVQSRRED*SSGRGS Trigger: GCTGCCTCTGCCGCTGCTTCAATCCTCTCTTCTGCT...TTGGACATCAGTCCCAAGTGTGGCTACAGTGGCTCCCACATCATGATCCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGGAATCAGTACATCCTTaGCCTCAGCTAGGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKESVHP*PQLGAS Trigger: GGATGCTCCTAGCTGAGGTCAAGGATGTACTGATTC...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGCTGTGCACGAACTTCTaGTCTGCCAGGTACTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKLCTNF*SARYSI Trigger: TATGGAGTACCTGGCAGAGCAGAAGTTCGTGCACAG...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTATCTGAAGGTGGGTCGTaGCGCTGGGTCAGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLSEGGS*RWVSLP Trigger: TGGGAGGCTGACCCAGCGGCACGACCCACCTTCAGA...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCCACGAAAGAGAAGCCTTCCTGTACAGAGATGCCTTCCACTCGGAAGTGCAGGAGGCCAAATATTTaGGCAGCACCGACAGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: GSTKEKPSCTEMPSTRKCRRPNI*AAPTAT Trigger: CGTCGCTGTCGGTGCTGCCCAAATATTTGGCCTCCT...GCACTTCCGAGTGGAAGGCATCTCTGTACAGGAAGGCTTCTCTTTCGTGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTACGACAGCCAGGGCCCTaGATGGGCACCTTGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLRQPGP*MGTLKT Trigger: GGTCTTCAAGGTGCCCATCCAGGGCCCTGGCTGTCG...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGTACACAGACCTGCAATaGGACACCATCCTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGLKWARFPTFSGPRKLKYTDLQ*DTILAK Trigger: CTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTA...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTATCCTTTGGTGGTCCATaGGGGCCTGGACCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLSFGGP*GPGPQL Trigger: GAGCTGTGGTCCAGGCCCTCATGGACCACCAAAGGA...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACGGCACTGGGTTCCATTaGCCAGCACAGCCCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYGTGFH*PAQPGW Trigger: CCAGCCGGGCTGTGCTGGTCAATGGAACCCAGTGCC...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTAGGGGAGCGAATGAAATaGAGCAGGTCTCCGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLGERMK*SRSPWR Trigger: GCGCCACGGAGACCTGCTTCATTTCATTCGCTCCCC...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACGCACAGCCCGGCTGGTaGCGACAGACAGGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDAQPGW*RQTGSG Trigger: GCCAGAGCCTGTCTGTCGGCACCAGCCGGGCTGTGC...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | AAAATGACGACAGCCAGGGCCCTGGATGGGCACCTTGAAGACCTGGTCCCCAGACCAAAAAGCACTTCCTaGCCCTCTGAAATGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KMTTARALDGHLEDLVPRPKSTS*PSEMLS Trigger: ACTGAGCATTTCAGAGGGCCAGGAAGTGCTTTTTGG...TCTGGGGACCAGGTCTTCAAGGTGCCCATCCAGGGCCCTGGCTGTCGTCATTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTTCAGGTTTCAACTCAACCAGGCCAGCTCTGAGTGGACTGGGTGGGGGCACATACAACAGAGTTaGGACCCATGCCAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MFFRFQLNQASSEWTGWGHIQQS*DPCQSH Trigger: GTGGCTCTGGCATGGGTCCCAACTCTGTTGTATGTG...CCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTGAGTTGAAACCTGAAGAACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACAGTGGCAACGGGAGCTaGGGCCGGAGGCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDSGNGS*GRRPLH Trigger: GTGGAGAGGCCTCCGGCCCCAGCTCCCGTTGCCACT...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| 3UTR CAA 72 bp | AAGTACCCCCAGCCCGCGGGCCAAAGTCAGGTTTTATaGATGTCAGCACTGGCTCCACGAAAGAGAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KYPQPAGQSQVL*MSALAPRKRSL Trigger: AAGGCTTCTCTTTCGTGGAGCCAGTGCTGACATCAATAAAACCTGACTTTGGCCCGCGGGCTGGGGGTACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCCCCCTATCTGCAGATaGAGGGGGACCCTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDPPICR*RGTLAV Trigger: CACGGCCAGGGTCCCCCTTCATCTGCAGATAGGGGG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTAGCTGGCCATGGATCATaGTGTGGGAGCCACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLAGHGS*CGSHCS Trigger: GCTACAGTGGCTCCCACATCATGATCCATGGCCAGC...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATCAACCAGGCCAGCTCTaGGTGGACTGGGTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHQPGQL*VDWVGA Trigger: TGCCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTG...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACGATGTAGGCCACGCATaGGCAGCCCCTCCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDDVGHA*AAPPAG Trigger: TCCTGCGGGAGGGGCTGCTCATGCGTGGCCTACATC...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACGCCGGGGCTTTGACGTaGTCCTGCAATGCTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYAGALT*SCNAEA Trigger: CGCCTCAGCATTGCAGGAGCACGTCAAAGCCCCGGC...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTATGGCCCACGGTGATCTaGTGTGTTCCCTCAGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLWPTVI*CVPSGT Trigger: CGTACCTGAGGGAACACACCAGATCACCGTGGGCCA...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGTAGTCCCCACTGCCTaGGTGACCAGGGGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHVVPTA*VTRGSS Trigger: GCTGGAGCCCCTGGTCACCCAGGCAGTGGGGACTAC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTATCTGAGTGGACTGGGTaGGGGCAGGAAGCGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLSEWTG*GQEAKT Trigger: GGTTTTCGCTTCCTGCCCCCACCCAGTCCACTCAGA...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| 3UTR CAA 72 bp | ATGCCTTCCACTCGGAAGTGCTTGCCTGCTGGCATGTaGGTGATGACAAGGCTGATGTTTGTAGTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MPSTRKCLPAGM*VMTRLMFVVPT Trigger: AGTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGCAAGCACTTCCGAGTGGAAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGGGTTGAGCCACAGCTaGCCAGGGCTGGCAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHGLSHS*PGLANL Trigger: CAGGTTTGCCAGCCCTGGTCAGCTGTGGCTCAACCC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTAGGCAACGCCAACAGGTaGGAAAATGACGACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLGNANR*ENDDSQ Trigger: CTGGCTGTCGTCATTTTCTCACCTGTTGGCGTTGCC...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCGAGGCTCCAGCTCATaGAGGAAGCAGCGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDRGSSS*RKQRPC Trigger: ACAGGGCCGCTGCTTCCTGCATGAGCTGGAGCCTCG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACTGGAGCAGAGTGGGCTaGCTGAAGCACTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYWSRVG*LKHWVG Trigger: CCCTACCCAGTGCTTCAGGCAGCCCACTCTGCTCCA...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACGGACAGTGGTCCTGTTaGCAGGAGCCAGGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYGQWSC*QEPGHS Trigger: GGAGTGTCCTGGCTCCTGGCAACAGGACCACTGTCC...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACGTTTGTAGTCCCCACTaGCTGGGTGACCAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYVCSPH*LGDQGL Trigger: GAGCCCCTGGTCACCCAGGCAGTGGGGACTACAAAC...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATACTGCCAGTTCAGGTTaGTGGACGCCGCCGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHTASSG*WTPPTA Trigger: GGCTGTCGGCGGCGTCCACCAACCTGAACTGGCAGT...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTAGTCAGAGAGTGTTGTTaGGGAGAGGGAGTGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLVRECC*GEGVST Trigger: GGTGCTCACTCCCTCTCCCCAACAACACTCTCTGAC...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCCAAGCACGTGCAGGTaGTTGCGTGTGGCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYPSTCR*LRVATN Trigger: GTTTGTGGCCACACGCAATCACCTGCACGTGCTTGG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATACCAGCCACATCCCATaGAGCGCTGTGCTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHTSHIP*SAVLSG Trigger: GCCTGAGAGCACAGCGCTTCATGGGATGTGGCTGGT...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATCCCTGGCCTAGGGCTTaGAGAGTCCTTAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHPWPRA*RVLRQQ Trigger: CTGCTGCCTAAGGACTCTTCAAGCCCTAGGCCAGGG...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACGTGGTCCCCAAGCAGTaGGGCCACTACCTGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYVVPKQ*GHYLLY Trigger: GTAAAGCAGGTAGTGGCCTCACTGCTTGGGGACCAC...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACACACAGTCACACAGTCTaGCACAGCGCCCAGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITHSHTV*HSAQPD Trigger: GTCGGGCTGGGCGCTGTGGCAGACTGTGTGACTGTG...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTACACATACAACAGAGTTaGGACCCATGCCAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLHIQQS*DPCQSH Trigger: GTGGCTCTGGCATGGGTCCCAACTCTGTTGTATGTG...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | GGCCAGCACAGCCACAAGCAGGATCAAGACCAGAAGAGCAATAAGGAGTATCCTCAAAAACTGGGCGTCTaGAAGAAGTCAAGGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQHSHKQDQDQKSNKEYPQKLGV*KKSRPL Trigger: GAGAGGCCTTGACTTCTTCCAGACGCCCAGTTTTTG...AGGATACTCCTTATTGCTCTTCTGGTCTTGATCCTGCTTGTGGCTGTGCTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAGTCGGCAGGGACTTTaGCCCACGGTGATCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYSRQGL*PTVIWC Trigger: ACACCAGATCACCGTGGGCCAAAGTCCCTGCCGACT...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACACCCCGGAGCTCATGTTaGCAGACCTCACCACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITPRSSC*QTSPPT Trigger: CGTGGGTGGTGAGGTCTGCCAACATGAGCTCCGGGG...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCTCTGTCCGCAGCAGTaGGACACTTGTCCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYLCPQQ*DTCPIP Trigger: AGGGATGGGACAAGTGTCCCACTGCTGCGGACAGAG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| 3UTR CAA 72 bp | TGGATGACCACTTGTTCATGGGGAATCAGTACATCCTaGACCTCAGCTAGGAGCATCCTGTCCAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WMTTCSWGISTS*TSARSILSRSW Trigger: CCAGGATCTGGACAGGATGCTCCTAGCTGAGGTCAAGGATGTACTGATTCCCCATGAACAAGTGGTCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACAGCAGAAGAGAGGATTaGAGCAGCGGCAGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDSRRED*SSGRGS Trigger: GCTGCCTCTGCCGCTGCTTCAATCCTCTCTTCTGCT...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCACTTCCTGGCCCTCTaGAATGCTCAGTTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYHFLAL*NAQFHS Trigger: GCTGTGGAACTGAGCATTTCAGAGGGCCAGGAAGTG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | ATGTTCTTCAGGTTTCAACTCAACCAGGCCAGCTCTGAGTGGACTGGGTGGGGGGAAGAATTTGAAGAGTaGCAGCAATATTCGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: MFFRFQLNQASSEWTGWGEEFEE*QQYSTP Trigger: GGGTGTCGAATATTGCTGTCACTCTTCAAATTCTTC...CCCCCACCCAGTCCACTCAGAGCTGGCCTGGTTGAGTTGAAACCTGAAGAACAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | AGGATAGAACTCACTGATCTCAGGCGGACAGTGGTCCTGTTGCCAGGAGCCAGGCAGGGAAGAAGAATTTaGAGAGTGACAGCAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: RIELTDLRRTVVLLPGARQGRRI*RVTAIF Trigger: GAATATTGCTGTCACTCTTCAAATTCTTCTTCCCTG...CCTGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGATCAGTGAGTTCTATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCCTGTTGCCCACCCCTaGGGGTTTCGGACCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDPVAHP*GFRTTY Trigger: ATATGTGGTCCGAAACCCTCAGGGGTGGGCAACAGG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
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| CDS-3UTR GCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGAACAGGCTGTCCACTaGTGCCCAGGGAGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHEQAVH*CPGRSW Trigger: CCAACTTCTCCCTGGGCAGCAGTGGACAGCCTGTTC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGCTCAGATTCCCTGTTaGCCACCCCTGAGGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHAQIPC*PPLRVS Trigger: CGAAACCCTCAGGGGTGGGCAACAGGGAATCTGAGC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATCAGCTCGCACAAGTCTaGCAGCCAGGGTTCCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHQLAQV*QPGFPI Trigger: TATCGGGAACCCTGGCTGCCAGACTTGTGCGAGCTG...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR CCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGTCTGTGTCCTTTGGTaGTCCATGAGGGCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHVCVLW*SMRAWT Trigger: GGTCCAGGCCCTCATGGACCACCAAAGGACACAGAC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAGGAGGCCAAATATTTaGGCAGCACCGACAGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYRRPNI*AAPTAT Trigger: CGTCGCTGTCGGTGCTGCCCAAATATTTGGCCTCCT...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATCAGAGCCACCATCCTTaGCGGTCACAAAGACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHQSHHP*RSQRPQ Trigger: TTGGGGTCTTTGTGACCGTCAAGGATGGTGGCTCTG...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR TCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACAGACTTTGGCCCACGGTaGTCTGGTGTGTTCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITDFGPR*SGVFPQ Trigger: CTGAGGGAACACACCAGATCACCGTGGGCCAAAGTC...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCGTGAAGTGCCATGCTaGAGTCAGATGCTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDREVPC*SQMLAM Trigger: CATGGCCAGCATCTGACTTCAGCATGGCACTTCACG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACTGCGACTCAGAGACTTaGTGGCACAGTGGGTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYCDSET*WHSGSD Trigger: ATCAGACCCACTGTGCCATCAAGTCTCTGAGTCGCA...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACACATCGGACTTGGTGGTaGACCTGTAGGTCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITHRTWW*TCRSAG Trigger: GCCTGCAGACCTACAGGTTCACCACCAAGTCCGATG...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACACGGACCAGACGTGTATaGAAGGCACTGGGAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITRTRRV*KALGGL Trigger: AAGCCCTCCCAGTGCCTTGCATACACGTCTGGTCCG...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACGCGCCGGCGTTTAGGTaGAAAATGACAGTCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYAPAFR*KMTVQD Trigger: GTCTTGGACTGTCATTTTGCACCTAAACGCCGGCGC...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCCAAGACGTGTCACATaGAGTGCGGTGACCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYPRRVT*SAVTFT Trigger: AGTGAAGGTCACCGCACTGCATGTGACACGTCTTGG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATACTGCCCCGCACACCTaGTCTCCACTGTACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHTAPHT*SPLYFV Trigger: GACAAAGTACAGTGGAGAGCAGGTGTGCGGGGCAGT...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAGCCTCCACCTCCTaGACCTCTGTAATGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYKASTS*TSVMRL Trigger: GAGTCGCATTACAGAGGTGCAGGAGGTGGAGGCTTT...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACAGCAGCCAGGTCTCTGTaGACGAACTTCTGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITAARSL*TNFCSA Trigger: GGCAGAGCAGAAGTTCGTGCACAGAGACCTGGCTGC...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCTGCAGGCTCTCCAGTaGCATCCATTTGACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDLQALQ*HPFDWQ Trigger: CTGCCAGTCAAATGGATGGCACTGGAGAGCCTGCAG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTACCAAAAAGCACTTCCTaGCCCTCTGAAATGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLPKSTS*PSEMLS Trigger: ACTGAGCATTTCAGAGGGCCAGGAAGTGCTTTTTGG...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACAATCTCAGGCGGACAGTaGTCCTGTTGCCAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITISGGQ*SCCQEP Trigger: TGGCTCCTGGCAACAGGACCACTGTCCGCCTGAGAT...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACGTCAGATGCTGGCCATaGATCATGATGTGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYVRCWP*IMMWEP Trigger: TGGCTCCCACATCATGATCCATGGCCAGCATCTGAC...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCGTTTAGGTGCAAAATaGCAGTCCAAGACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYRLGAK*QSKTSS Trigger: GGAGCTGGTCTTGGACTGTCATTTTGCACCTAAACG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACACACTTCCTGGCCCTCTaGAATGCTCAGTTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITHFLAL*NAQFHS Trigger: GCTGTGGAACTGAGCATTTCAGAGGGCCAGGAAGTG...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCCCATCCCTACTCTCTaGCGATTCTTCATGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDPIPTL*RFFMVR Trigger: CCGAACCATGAAGAATCGTCAGAGAGTAGGGATGGG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACGCGCCGGCGTTTAGGTaGAAAATGACAGTCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDAPAFR*KMTVQD Trigger: GTCTTGGACTGTCATTTTGCACCTAAACGCCGGCGC...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR GCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATCCTGGCCCTCTGAAATaGTCAGTTCCACAGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHPGPLK*SVPQPV Trigger: AACTGGCTGTGGAACTGAGCATTTCAGAGGGCCAGG...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR CCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCAAAAACTGGGCGTCTaGAAGAAGTCAAGGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYQKLGV*KKSRPL Trigger: GAGAGGCCTTGACTTCTTCCAGACGCCCAGTTTTTG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACTCCACAGTGCCCATGTaGGCCACTGTAACATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDSTVPM*ATVTLP Trigger: TGGCAATGTTACAGTGGCCCACATGGGCACTGTGGA...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCATGGAATGATAGCGTaGAGTGCCATGCTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYHGMIA*SAMLKS Trigger: TGACTTCAGCATGGCACTTCACGCTATCATTCCATG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCGGAAGCTGTATCGTTaGTGTCAGAGAGTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HCSISVITAGSSVFRNRYRKLYR*CQRVLL Trigger: CAACAACACTCTCTGACATCAACGATACAGCTTCCG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCACCTTGACTGTGAATaGCTCGTCCAGCATGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDHLDCE*LVQHAV Trigger: AACTGCATGCTGGACGAGTCATTCACAGTCAAGGTG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGCTGAAGTCAGATGCTaGCCATGGATCATGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCDHCWILCIPKQVQNRHAEVRC*PWIMMW Trigger: CCACATCATGATCCATGGCCAGCATCTGACTTCAGC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
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| 3UTR CAA 72 bp | GTGGTAGACAACACCAAAGTGGCCTTTGCCAATGACTaGGTCAGTATGGATGACCACTTGTTCATGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VVDNTKVAFAND*VSMDDHLFMGN Trigger: ATTCCCCATGAACAAGTGGTCATCCATACTGACCAAGTCATTGGCAAAGGCCACTTTGGTGTTGTCTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTACAGGGAAGAAGAATTTaGAGAGTGACAGCAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVICSRPLSRSSACGLQGRRI*RVTAIF Trigger: GAATATTGCTGTCACTCTTCAAATTCTTCTTCCCTG...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR GCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACACACGAACTTCTGCTCTaGCAGGTACTCCATACCACA | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITHELLL*QVLHTT Trigger: TGTGGTATGGAGTACCTGGCAGAGCAGAAGTTCGTG...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CCA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACAGAAGTGCTTGCCTGCTaGCATGTTGGTGATGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VITAGSSVFRNRYKTDITEVLAC*HVGDDK Trigger: CTTGTCATCACCAACATGCCAGCAGGCAAGCACTTC...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACTACGTTCACATAAGCTaGTGTCAGCTGCACATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDYVHIS*CQLHIV Trigger: CACTATGTGCAGCTGACAGCAGCTTATGTGAACGTA...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
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| CDS-3UTR CCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCCTTTGCCAATGACTTaGTCAGTATGGATGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDPLPMT*SVWMTT Trigger: AGTGGTCATCCATACTGACCAAGTCATTGGCAAAGG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACGAAGAATTTGAAGAGTaGCAGCAATATTCGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDEEFEE*QQYSTP Trigger: GGGTGTCGAATATTGCTGTCACTCTTCAAATTCTTC...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGACTTGGTCAGTATaGATGACCACTTGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVITAGSSVFRNRYKTDMTWSV*MTTCSW Trigger: CCATGAACAAGTGGTCATCCATACTGACCAAGTCAT...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 90 bp | AGCCAGTTTGGCATCCACTGGAGCAGAGTGGGCTGCCTGAAGCACTaGGTAGGGCTGTGTGCCCTCCGGGGCTCCACGGCGCCGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQFGIHWSRVGCLKH*VGLCALRGSTAPAF Trigger: AAACGCCGGCGCCGTGGAGCCCCGGAGGGCACACAGCCCTACCCAGTGCTTCAGGCAGCCCACTCTGCTCCAGTGGATGCCAAACTGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS GCA 90 bp | GTAGGGCTGTGTGCCCTCCGGGGCTCCACGGCGCCGGCGTTTAGGTaGAAAATGACAGTCCAAGACCAGCTCCCGGTAGTCACCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGLCALRGSTAPAFR*KMTVQDQLPVVTNL Trigger: GAGATTGGTGACTACCGGGAGCTGGTCTTGGACTGTCATTTTGCACCTAAACGCCGGCGCCGTGGAGCCCCGGAGGGCACACAGCCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS TCA 90 bp | CCAGCTCATGCAGGAAGCAGCGGCCCTGTAGGGTTGAGCCACAGCTaGCCAGGGCTGGCAAACCTGGCTCCATCACTAGCACCAGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PAHAGSSGPVGLSHS*PGLANLAPSLAPVC Trigger: ACACACTGGTGCTAGTGATGGAGCCAGGTTTGCCAGCCCTGGTCAGCTGTGGCTCAACCCTACAGGGCCGCTGCTTCCTGCATGAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS CCA 90 bp | CACGTACTTGACACTGAAGTCTCGGGAGGCTGCGTAGGGTATTCGTaGGCACTGCCAGTTCAGGTTGGTGGACGCCGCCGACAGCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HVLDTEVSGGCVGYS*ALPVQVGGRRRQPQ Trigger: TTGCGGCTGTCGGCGGCGTCCACCAACCTGAACTGGCAGTGCCCACGAATACCCTACGCAGCCTCCCGAGACTTCAGTGTCAAGTACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGAGGCCCTGCCTGGGCTaGAGCGAACCACTTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKRPCLG*SEPLGS Trigger: TGAGCCAAGTGGTTCGCTCAAGCCCAGGCAGGGCCT...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
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| CDS TCA 90 bp | GGCTCCATCACTAGCACCAGTGTGTCTGTGTCCTTTGGTGGTCCATaGGGGCCTGGACCACAGCTCGCACAAGTCTGGCAGCCAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSITSTSVSVSFGGP*GPGPQLAQVWQPGF Trigger: GAACCCTGGCTGCCAGACTTGTGCGAGCTGTGGTCCAGGCCCTCATGGACCACCAAAGGACACAGACACACTGGTGCTAGTGATGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS GCA 90 bp | GGAGAAGCTGGGGACCACGTACTTGACACTGAAGTCTCGGGAGGCTaGGTAGGGTATTCGTGGGCACTGCCAGTTCAGGTTGGTGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: GEAGDHVLDTEVSGG*VGYSWALPVQVGGR Trigger: GCGTCCACCAACCTGAACTGGCAGTGCCCACGAATACCCTACGCAGCCTCCCGAGACTTCAGTGTCAAGTACGTGGTCCCCAGCTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS CCA 90 bp | GGGAGGCTGCGTAGGGTATTCGTGGGCACTGCCAGTTCAGGTTGGTaGACGCCGCCGACAGCCGCAAAAGAAGCATTAGCAGAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRLRRVFVGTASSGW*TPPTAAKEALAEER Trigger: CCTCTCTTCTGCTAATGCTTCTTTTGCGGCTGTCGGCGGCGTCCACCAACCTGAACTGGCAGTGCCCACGAATACCCTACGCAGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS CCA 90 bp | CTCGGGAGGCTGCGTAGGGTATTCGTGGGCACTGCCAGTTCAGGTTaGTGGACGCCGCCGACAGCCGCAAAAGAAGCATTAGCAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGRLRRVFVGTASSG*WTPPTAAKEALAEE Trigger: CTCTTCTGCTAATGCTTCTTTTGCGGCTGTCGGCGGCGTCCACCAACCTGAACTGGCAGTGCCCACGAATACCCTACGCAGCCTCCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGGTGTGTCTGTGTCCTTaGGTGGTCCATGAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKVCLCP*VVHEGL Trigger: CAGGCCCTCATGGACCACCAAAGGACACAGACACAC...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR CAA 90 bp | CCAGGAGCCAGGACACTCCTTCTGCCGGTCACACCGGTCCCCACACCAGCCACACGACGGAAAACCTGGTaGGAATCCAGAAGTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGARTLLLPVTPVPTPATRRKTW*ESRSIR Trigger: TCTGATACTTCTGGATTCCAACCAGGTTTTCCGTCG...TGTGGCTGGTGTGGGGACCGGTGTGACCGGCAGAAGGAGTGTCCTGGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGCCAGAGCCACCATCCTaGACGGTCACAAAGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKPEPPS*TVTKTP Trigger: TGGGGTCTTTGTGACCGTCAAGGATGGTGGCTCTGG...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR CAA 90 bp | CCAGGACACTCCTTCTGCCGGTCACACCGGTCCCCACACCAGCCACATCCCATGCAGGCTTGTTATTGTTaGCTGAGAATAGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGHSFCRSHRSPHQPHPMQACYC*LRIGRL Trigger: CAGCCTGCCTATTCTCAGCAAACAATAACAAGCCTG...CATGGGATGTGGCTGGTGTGGGGACCGGTGTGACCGGCAGAAGGAGTGTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| CDS GCA 90 bp | TCACCAATCTCTGGCTCTACAGCATTGAGCCGGACCAGACGTGTATaGAAGGCACTGGGAGGGCTTGTGACACTGATGGGCTGGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPISGSTALSRTRRV*KALGGLVTLMGWTV Trigger: GACTGTCCAGCCCATCAGTGTCACAAGCCCTCCCAGTGCCTTGCATACACGTCTGGTCCGGCTCAATGCTGTAGAGCCAGAGATTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS-3UTR CAA 90 bp | GCCTGCTGGCATGTTGGTGATGACAAGGCTGATGTTTGTAGTCCCCACTGCCTGCCAGAGCCACCATCCTaGACGGTCACAAAGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACWHVGDDKADVCSPHCLPEPPS*TVTKTP Trigger: TGGGGTCTTTGTGACCGTCAAGGATGGTGGCTCTGG...CAGGCAGTGGGGACTACAAACATCAGCCTTGTCATCACCAACATGCCAGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGGATCCTAACAGTCCATaGAAGAGGTCCACACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKDPNSP*KRSTRV Trigger: CACCCGTGTGGACCTCTTCAATGGACTGTTAGGATC...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTACGGCACTGGGTTCCATaGACCAGCACAGCCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQLVICSRPLSRSSACGLRHWVP*TSTARL Trigger: CAGCCGGGCTGTGCTGGTCAATGGAACCCAGTGCCG...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGCCAAAGTCAGCCACCTaGACTGTGAATGACTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKPKSAT*TVNDSS Trigger: GGACGAGTCATTCACAGTCAAGGTGGCTGACTTTGG...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTACAGTCGGCAGGGACTTaGGCCCACGGTGATCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQLVICSRPLSRSSACGLQSAGT*AHGDLV Trigger: CACCAGATCACCGTGGGCCAAAGTCCCTGCCGACTG...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGCAGGCTTGTTATTGTTaGCTGAGAATAGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKQACYC*LRIGRL Trigger: CAGCCTGCCTATTCTCAGCAAACAATAACAAGCCTG...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGGCCTCAGGCTTGTTATaGTTTGCTGAGAATAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKASGLL*FAENRQ Trigger: CTGCCTATTCTCAGCAAACAATAACAAGCCTGAGGC...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS TCA 90 bp | AGGCACATACAACAGAGTTGGGACCCATGCCAGAGCCACCATCCTTaGCGGTCACAAAGACCCCAAAAAGCACTTCCTGGCCCTCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RHIQQSWDPCQSHHP*RSQRPQKALPGPLK Trigger: TTTCAGAGGGCCAGGAAGTGCTTTTTGGGGTCTTTGTGACCGTCAAGGATGGTGGCTCTGGCATGGGTCCCAACTCTGTTGTATGTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CCA 90 bp | TGCAAAATGACAGTCCAAGACCAGCTCCCGGTAGTCACCAATCTCTaGCTCTACAGCATTGAGCCGGACCAGACGTGTATGCAAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: CKMTVQDQLPVVTNL*LYSIEPDQTCMQGT Trigger: AGTGCCTTGCATACACGTCTGGTCCGGCTCAATGCTGTAGAGCCAGAGATTGGTGACTACCGGGAGCTGGTCTTGGACTGTCATTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CCA 90 bp | GAGCCACCATCCTTGACGGTCACAAAGACCCCAAAAAGCACTTCCTaGCCCTCTGAAATGCTCAGTTCCACAGCCAGTTTGGCATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: EPPSLTVTKTPKSTS*PSEMLSSTASLAST Trigger: AGTGGATGCCAAACTGGCTGTGGAACTGAGCATTTCAGAGGGCCAGGAAGTGCTTTTTGGGGTCTTTGTGACCGTCAAGGATGGTGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CCA 90 bp | CCGGAGGCCTCTCCACCAGGCGGATTAGGACAAAAACTGGGCGTCTaGAAGAAGTCAAGGCCTCTCGACAACAGGGAAGAAGAATTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PEASPPGGLGQKLGV*KKSRPLDNREEEFE Trigger: TTCAAATTCTTCTTCCCTGTTGTCGAGAGGCCTTGACTTCTTCCAGACGCCCAGTTTTTGTCCTAATCCGCCTGGTGGAGAGGCCTCCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 90 bp | GAGGCCAAATATTTGGGCAGCACCGACAGCGACGGAAAACCTGGTTaGAATCCAGAAGTATCAGACTTTAGACGACGGATGGACACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EAKYLGSTDSDGKPG*NPEVSDFRRRMDTE Trigger: CTCGGTGTCCATCCGTCGTCTAAAGTCTGATACTTCTGGATTCCAACCAGGTTTTCCGTCGCTGTCGGTGCTGCCCAAATATTTGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACCCCTGGATGGGCACCTaGAAGACCTGGTCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISVITAGSSVFRNRYKTDPWMGT*KTWSPE Trigger: CTCTGGGGACCAGGTCTTCAAGGTGCCCATCCAGGG...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATCGGACAGTGGTCCTGTaGCCAGGAGCCAGGACACTC | + |
|
Preference number: 5 (lower is better) Translates to: LCDHCWILCIPKQVQNRHRTVVL*PGARTL Trigger: GAGTGTCCTGGCTCCTGGCAACAGGACCACTGTCCG...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACACCCCCGGAGCTCATGTaGGCAGACCTCACCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VITAGSSVFRNRYKTDITPPELM*ADLTTH Trigger: GTGGGTGGTGAGGTCTGCCAACATGAGCTCCGGGGG...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTATGTCAGAGAGTGTTGTaGGGGAGAGGGAGTGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQLVICSRPLSRSSACGLCQRVL*GRGSEH Trigger: GTGCTCACTCCCTCTCCCCAACAACACTCTCTGACA...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 90 bp | GGCCCGCTCTTTCTGCTCACCGGATTAGGACAAAAACTGGGCGTCTaGAAGAAGTCAAGGCCTCTCGACAACAGGGAAGAAGAATTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPLFLLTGLGQKLGV*KKSRPLDNREEEFE Trigger: TTCAAATTCTTCTTCCCTGTTGTCGAGAGGCCTTGACTTCTTCCAGACGCCCAGTTTTTGTCCTAATCCGGTGAGCAGAAAGAGCGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCTTGTAATTTGCTCAAGGCCACTTAGCAGATCTAGTGCCTGTGGCCTATGGGCCACTGTAACATaGCCAAGACGTGTCACATGC | + |
|
Preference number: 5 (lower is better) Translates to: RQLVICSRPLSRSSACGLWATVT*PRRVTC Trigger: GCATGTGACACGTCTTGGCAATGTTACAGTGGCCCA...TAGGCCACAGGCACTAGATCTGCTAAGTGGCCTTGAGCAAATTACAAGCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 90 bp | AGCAATATTCGACACCCTCTTCAATCAGGATGTTCAGGTGGTAAATaGGGAAGGCACATACAACAGAGTTGGGACCCATGCCAGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SNIRHPLQSGCSGGK*GRHIQQSWDPCQSH Trigger: GTGGCTCTGGCATGGGTCCCAACTCTGTTGTATGTGCCTTCCCCATTTACCACCTGAACATCCTGATTGAAGAGGGTGTCGAATATTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACGTGTGTCTGTGTCCTTaGGTGGTCCATGAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISVITAGSSVFRNRYKTDVCLCP*VVHEGL Trigger: CAGGCCCTCATGGACCACCAAAGGACACAGACACAC...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCTCAAATGGGCCCGGTTTCCCACCTTCAGTGGCCCCAGAAAGCTAAAGACAGGGAAGAAGAATTaGAAGAGTGACAGCAATATT | + |
|
Preference number: 5 (lower is better) Translates to: EGLKWARFPTFSGPRKLKTGKKN*KSDSNI Trigger: AATATTGCTGTCACTCTTCAAATTCTTCTTCCCTGT...CTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCATTTGAGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACAGCAGCAGTGGGACACTaGTCCCATCCCTACTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VITAGSSVFRNRYKTDITAAVGH*SHPYSL Trigger: CAGAGAGTAGGGATGGGACAAGTGTCCCACTGCTGC...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | GACACCCACCGTCTACACAGACCTGCAATGGGACACCATCCTTGCCAAGTTGCAACAGGGAAGAAGAATTaGAAGAGTGACAGCAATATT | + |
|
Preference number: 5 (lower is better) Translates to: DTHRLHRPAMGHHPCQVATGKKN*KSDSNI Trigger: AATATTGCTGTCACTCTTCAAATTCTTCTTCCCTGT...TGCAACTTGGCAAGGATGGTGTCCCATTGCAGGTCTGTGTAGACGGTGGGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCGACGGAAAACCTGGTaGGAATCCAGAAGTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HCSISVITAGSSVFRNRYRRKTW*ESRSIR Trigger: TCTGATACTTCTGGATTCCAACCAGGTTTTCCGTCG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGGAATCAGTACATCCTaGACCTCAGCTAGGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LCDHCWILCIPKQVQNRHGISTS*TSARSI Trigger: GATGCTCCTAGCTGAGGTCAAGGATGTACTGATTCC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACGCCTTTGCCAATGACTaGGTCAGTATGGATGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISVITAGSSVFRNRYKTDAFAND*VSMDDH Trigger: GTGGTCATCCATACTGACCAAGTCATTGGCAAAGGC...GTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS TCA 90 bp | AAGAAGTCAAGGCCTCTCGACAACAGGGAAGAAGAATTTGAAGAGTaGCAGCAATATTCGACACCCTCTTCAATCAGGATGTTCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKSRPLDNREEEFEE*QQYSTPSSIRMFRW Trigger: CCACCTGAACATCCTGATTGAAGAGGGTGTCGAATATTGCTGTCACTCTTCAAATTCTTCTTCCCTGTTGTCGAGAGGCCTTGACTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS TCA 90 bp | CGTCTGGAAGAAGTCAAGGCCTCTCGACAACAGGGAAGAAGAATTTaGAGAGTGACAGCAATATTCGACACCCTCTTCAATCAGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLEEVKASRQQGRRI*RVTAIFDTLFNQDV Trigger: AACATCCTGATTGAAGAGGGTGTCGAATATTGCTGTCACTCTTCAAATTCTTCTTCCCTGTTGTCGAGAGGCCTTGACTTCTTCCAGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATGTGCAGGCCTCAGGCTaGTTATTGTTTGCTGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LCDHCWILCIPKQVQNRHVQASG*LLFAEN Trigger: ATTCTCAGCAAACAATAACAAGCCTGAGGCCTGCAC...ATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS-3UTR CAA 90 bp | CACTGTAGTATCTCTGTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACCAAAGTCAGGTTTTATaGATGTCAGCACTGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HCSISVITAGSSVFRNRYQSQVL*MSALAP Trigger: TGGAGCCAGTGCTGACATCAATAAAACCTGACTTTG...GTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCACAGAGATACTACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS-3UTR CAA 90 bp | GTGATCACTGCTGGATCCTCTGTATTCCGAAACAGGTACAAAACAGACATTACAAGTATGGATGACCACTaGTTCATGGGGAATCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VITAGSSVFRNRYKTDITSMDDH*FMGNQY Trigger: GTACTGATTCCCCATGAACAAGTGGTCATCCATACT...TGTAATGTCTGTTTTGTACCTGTTTCGGAATACAGAGGATCCAGCAGTGATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 72 bp | GGCATCCACTGGAGCAGAGTGGGCTGCCTGAAGCACTaGGTAGGGCTGTGTGCCCTCCGGGGCTCCACGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GIHWSRVGCLKH*VGLCALRGSTA Trigger: CGCCGTGGAGCCCCGGAGGGCACACAGCCCTACCCAGTGCTTCAGGCAGCCCACTCTGCTCCAGTGGATGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS GCA 72 bp | TGTGCCCTCCGGGGCTCCACGGCGCCGGCGTTTAGGTaGAAAATGACAGTCCAAGACCAGCTCCCGGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CALRGSTAPAFR*KMTVQDQLPVV Trigger: GACTACCGGGAGCTGGTCTTGGACTGTCATTTTGCACCTAAACGCCGGCGCCGTGGAGCCCCGGAGGGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CCA 72 bp | GACACTGAAGTCTCGGGAGGCTGCGTAGGGTATTCGTaGGCACTGCCAGTTCAGGTTGGTGGACGCCGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: DTEVSGGCVGYS*ALPVQVGGRRR Trigger: TCGGCGGCGTCCACCAACCTGAACTGGCAGTGCCCACGAATACCCTACGCAGCCTCCCGAGACTTCAGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CCA 72 bp | CAGTGTGTCTGTGTCCTTTGGTGGTCCATGAGGGCCTaGACCACAGCTCGCACAAGTCTGGCAGCCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QCVCVLWWSMRA*TTARTSLAARV Trigger: AACCCTGGCTGCCAGACTTGTGCGAGCTGTGGTCCAGGCCCTCATGGACCACCAAAGGACACAGACACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CAA 90 bp | CCCAGGGGGCTAGCCACACAGTCCGTGCAGGCCTCAGGCTTGTTATaGTTTGCTGAGAATAGGCAGGCTGGAGCTGCTAAGTGCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRGLATQSVQASGLL*FAENRQAGAAKCRA Trigger: AGCCCTGCACTTAGCAGCTCCAGCCTGCCTATTCTCAGCAAACAATAACAAGCCTGAGGCCTGCACGGACTGTGTGGCTAGCCCCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CAA 90 bp | CGAGTGCCCAGGGGGCTAGCCACACAGTCCGTGCAGGCCTCAGGCTaGTTATTGTTTGCTGAGAATAGGCAGGCTGGAGCTGCTAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVPRGLATQSVQASG*LLFAENRQAGAAKC Trigger: GCACTTAGCAGCTCCAGCCTGCCTATTCTCAGCAAACAATAACAAGCCTGAGGCCTGCACGGACTGTGTGGCTAGCCCCCTGGGCACTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS TCA 72 bp | ACTAGCACCAGTGTGTCTGTGTCCTTTGGTGGTCCATaGGGGCCTGGACCACAGCTCGCACAAGTCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSTSVSVSFGGP*GPGPQLAQVWQ Trigger: CTGCCAGACTTGTGCGAGCTGTGGTCCAGGCCCTCATGGACCACCAAAGGACACAGACACACTGGTGCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS GCA 72 bp | GGGGACCACGTACTTGACACTGAAGTCTCGGGAGGCTaGGTAGGGTATTCGTGGGCACTGCCAGTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GDHVLDTEVSGG*VGYSWALPVQV Trigger: AACCTGAACTGGCAGTGCCCACGAATACCCTACGCAGCCTCCCGAGACTTCAGTGTCAAGTACGTGGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS GCA 72 bp | TCTGGCTCTACAGCATTGAGCCGGACCAGACGTGTATaGAAGGCACTGGGAGGGCTTGTGACACTGATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSTALSRTRRV*KALGGLVTLMG Trigger: GCCCATCAGTGTCACAAGCCCTCCCAGTGCCTTGCATACACGTCTGGTCCGGCTCAATGCTGTAGAGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS GCA 72 bp | GGCAGGCGACATCGACGCTGCTGTTGTTCCACAAACTaGCCCGCACACCTGCTCTCCACTGTACTTTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRRHRRCCCSTN*PAHLLSTVLCP Trigger: TGGACAAAGTACAGTGGAGAGCAGGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 72 bp | CTGCGTAGGGTATTCGTGGGCACTGCCAGTTCAGGTTaGTGGACGCCGCCGACAGCCGCAAAAGAAGCATTA | + |
|
Preference number: 6 (lower is better) Translates to: LRRVFVGTASSG*WTPPTAAKEAL Trigger: TAATGCTTCTTTTGCGGCTGTCGGCGGCGTCCACCAACCTGAACTGGCAGTGCCCACGAATACCCTACGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CCA 72 bp | CCTGGCCCTCTGAAATGCTCAGTTCCACAGCCAGTTTaGCATCCACTGGAGCAGAGTGGGCTGCCTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGPLKCSVPQPV*HPLEQSGLPEA Trigger: TGCTTCAGGCAGCCCACTCTGCTCCAGTGGATGCCAAACTGGCTGTGGAACTGAGCATTTCAGAGGGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CAA 72 bp | GACCACATATTCAGGCAGGCGACATCGACGCTGCTGTaGTTCCACAAACTGCCCCGCACACCTGCTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DHIFRQATSTLL*FHKLPRTPALH Trigger: GTGGAGAGCAGGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCCTGAATATGTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS GCA 72 bp | TTTCGGACCACATATTCAGGCAGGCGACATCGACGCTaGTGTTGTTCCACAAACTGCCCCGCACACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FRTTYSGRRHRR*CCSTNCPAHLL Trigger: GAGCAGGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCCTGAATATGTGGTCCGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 72 bp | GCAGGTCAGGCCCAAGCACGTGCAGGTGATTGCGTGTaGCCACAAACACCGCACTATTTGTACTGTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: AGQAQARAGDCV*PQTPHYLYCPR Trigger: ACGAGGACAGTACAAATAGTGCGGTGTTTGTGGCCACACGCAATCACCTGCACGTGCTTGGGCCTGACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CAA 72 bp | AGGGGGCTAGCCACACAGTCCGTGCAGGCCTCAGGCTaGTTATTGTTTGCTGAGAATAGGCAGGCTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGLATQSVQASG*LLFAENRQAGA Trigger: AGCTCCAGCCTGCCTATTCTCAGCAAACAATAACAAGCCTGAGGCCTGCACGGACTGTGTGGCTAGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CAA 90 bp | AGGGTTTCGGACCACATATTCAGGCAGGCGACATCGACGCTGCTGTaGTTCCACAAACTGCCCCGCACACCTGCTCTCCACTGTACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RVSDHIFRQATSTLL*FHKLPRTPALHCTL Trigger: CAAAGTACAGTGGAGAGCAGGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTCGATGTCGCCTGCCTGAATATGTGGTCCGAAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 72 bp | ACAGTCCAAGACCAGCTCCCGGTAGTCACCAATCTCTaGCTCTACAGCATTGAGCCGGACCAGACGTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: TVQDQLPVVTNL*LYSIEPDQTCM Trigger: CATACACGTCTGGTCCGGCTCAATGCTGTAGAGCCAGAGATTGGTGACTACCGGGAGCTGGTCTTGGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CAA 72 bp | TGCAGTGCGGTGACCTTCACTGATCCTAACAGTCCATaGAAGAGGTCCACACGGGTGAAGCTAGCGTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: CSAVTFTDPNSP*KRSTRVKLAWT Trigger: GGTCCACGCTAGCTTCACCCGTGTGGACCTCTTCAATGGACTGTTAGGATCAGTGAAGGTCACCGCACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CAA 90 bp | CGTGTCACATGCAGTGCGGTGACCTTCACTGATCCTAACAGTCCATaGAAGAGGTCCACACGGGTGAAGCTAGCGTGGACCATCAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RVTCSAVTFTDPNSP*KRSTRVKLAWTIKG Trigger: CCCTTTGATGGTCCACGCTAGCTTCACCCGTGTGGACCTCTTCAATGGACTGTTAGGATCAGTGAAGGTCACCGCACTGCATGTGACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CAA 72 bp | CCACACAGTCCGTGCAGGCCTCAGGCTTGTTATTGTTaGCTGAGAATAGGCAGGCTGGAGCTGCTAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PHSPCRPQACYC*LRIGRLELLSA Trigger: TGCACTTAGCAGCTCCAGCCTGCCTATTCTCAGCAAACAATAACAAGCCTGAGGCCTGCACGGACTGTGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS CAA 72 bp | CTAGCCACACAGTCCGTGCAGGCCTCAGGCTTGTTATaGTTTGCTGAGAATAGGCAGGCTGGAGCTGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LATQSVQASGLL*FAENRQAGAAK Trigger: CTTAGCAGCTCCAGCCTGCCTATTCTCAGCAAACAATAACAAGCCTGAGGCCTGCACGGACTGTGTGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS TCA 72 bp | GGTCACAAAGACCCCAAAAAGCACTTCCTGGCCCTCTaGAATGCTCAGTTCCACAGCCAGTTTGGCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GHKDPKKHFLAL*NAQFHSQFGIH Trigger: GTGGATGCCAAACTGGCTGTGGAACTGAGCATTTCAGAGGGCCAGGAAGTGCTTTTTGGGGTCTTTGTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS GCA 72 bp | CAAAGACCCCAAAAAGCACTTCCTGGCCCTCTGAAATaGTCAGTTCCACAGCCAGTTTGGCATCCACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRPQKALPGPLK*SVPQPVWHPLE Trigger: CTCCAGTGGATGCCAAACTGGCTGTGGAACTGAGCATTTCAGAGGGCCAGGAAGTGCTTTTTGGGGTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
||
| CDS GCA 72 bp | GACGCTGCTGTTGTTCCACAAACTGCCCCGCACACCTaGTCTCCACTGTACTTTGTCCATCATGGAATGATA | + |
|
Preference number: 6 (lower is better) Translates to: DAAVVPQTAPHT*SPLYFVHHGMI Trigger: TATCATTCCATGATGGACAAAGTACAGTGGAGAGCAGGTGTGCGGGGCAGTTTGTGGAACAACAGCAGCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035203.9 |
||
| CDS CCA 72 bp | TCCTTGACGGTCACAAAGACCCCAAAAAGCACTTCCTaGCCCTCTGAAATGCTCAGTTCCACAGCCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTVTKTPKSTS*PSEMLSSTASL Trigger: CAAACTGGCTGTGGAACTGAGCATTTCAGAGGGCCAGGAAGTGCTTTTTGGGGTCTTTGTGACCGTCAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS CCA 72 bp | CGACACCCTCTTCAATCAGGATGTTCAGGTGGTAAATaGGGAAGGCACATACAACAGAGTTGGGACCCATGC | + |
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Preference number: 6 (lower is better) Translates to: RHPLQSGCSGGK*GRHIQQSWDPC Trigger: GCATGGGTCCCAACTCTGTTGTATGTGCCTTCCCCATTTACCACCTGAACATCCTGATTGAAGAGGGTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS CCA 72 bp | TATTTGGGCAGCACCGACAGCGACGGAAAACCTGGTTaGAATCCAGAAGTATCAGACTTTAGACGACGGATG | + |
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Preference number: 6 (lower is better) Translates to: YLGSTDSDGKPG*NPEVSDFRRRM Trigger: CATCCGTCGTCTAAAGTCTGATACTTCTGGATTCCAACCAGGTTTTCCGTCGCTGTCGGTGCTGCCCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS TCA 72 bp | GAAGTCAAGGCCTCTCGACAACAGGGAAGAAGAATTTaGAGAGTGACAGCAATATTCGACACCCTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: EVKASRQQGRRI*RVTAIFDTLFN Trigger: ATTGAAGAGGGTGTCGAATATTGCTGTCACTCTTCAAATTCTTCTTCCCTGTTGTCGAGAGGCCTTGACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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| CDS CAA 72 bp | AGAAGTCAAGGCCTCTCGACAACAGGGAAGAAGAATTaGAAGAGTGACAGCAATATTCGACACCCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: RSQGLSTTGKKN*KSDSNIRHPLQ Trigger: TTGAAGAGGGTGTCGAATATTGCTGTCACTCTTCAAATTCTTCTTCCCTGTTGTCGAGAGGCCTTGACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035203.9 ENSMUST00000195617.6 |
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