Pregenerated sensors for MSS51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021815Ensembl transcript IDs: ENSMUST00000022353.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTaGCATCAACAGGGTAAGTTGATTAAGCTTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: FSIPQGSKLAKI*HQQGKLIKLSF Trigger: AAATGAAAGCTTAATCAACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAGCTAGGGCCAGGTTTTaGGAGGGCTGGAGATACTGG | + |
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Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVARARF*EGWRYW Trigger: CCAGTATCTCCAGCCCTCTCAAAACCTGGCCCTAGC...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTTCCTCCCAGAAGTCATaGTACAGGGCCCTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSSSQKS*YRALWP Trigger: TGGCCACAGGGCCCTGTATCATGACTTCTGGGAGGA...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGCTTCCATCAAGCCTaGGGAGGCATGGAAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVSFHQA*GGMETW Trigger: CCAGGTTTCCATGCCTCCCCAGGCTTGATGGAAGCT...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTACAGGGTCAAGGGCCGTaGCAGAACATCTGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVQGQGP*QNICHQ Trigger: TTGATGACAGATGTTCTGTCACGGCCCTTGACCCTG...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAGCCACCAAATCTGGATaGGCCAGAATCCCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVATKSG*ARIPVS Trigger: AGAGACTGGGATTCTGGCCCATCCAGATTTGGTGGC...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTATGCAGCCACCAAATCTaGATGGGCCAGAATCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVCSHQI*MGQNPS Trigger: ACTGGGATTCTGGCCCATCCAGATTTGGTGGCTGCA...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTACATCCACACCCACCATaGTCACATGAAAGCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVHPHPP*SHESQG Trigger: ACCTTGGCTTTCATGTGATCATGGTGGGTGTGGATG...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR GCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTACTGCACCTCTTACAGTaGCGGAGAACCTTGCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVLHLLQ*RRTLQL Trigger: CAATTGCAAGGTTCTCCGGCACTGTAAGAGGTGCAG...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTGGAGGCATGGAAACCTaGATGGAATGCAGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSGGMET*MECSHQ Trigger: TTGGTGGCTGCATTCCATCCAGGTTTCCATGCCTCC...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAGAAGTAGCAGCAGGGTaGGTAACCAAGCTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVEVAAG*VTKLPS Trigger: TGATGGAAGCTTGGTTACCCACCCTGCTGCTACTTC...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR GCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTACAACCACATGCAATGTaGTTCCTCCAGTCTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVQPHAM*FLQSSQ Trigger: TTGGGAAGACTGGAGGAAGCACATTGCATGTGGTTG...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR GCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAGAAACCTGGATGGAATaGAGCCACCAAATCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVETWME*SHQIWM Trigger: CATCCAGATTTGGTGGCTGCATTCCATCCAGGTTTC...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTCATGGGAATCACTGGTaGGGGTTTCTTGTGCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSHGNHW*GFLVLS Trigger: CGAAAGCACAAGAAACCCCCACCAGTGATTCCCATG...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTGGAGAACCTTGCAATTaGAAAGGCCATGAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSGEPCN*KGHEGA Trigger: TGCTCCCTCATGGCCTTTCCAATTGCAAGGTTCTCC...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGAAATGTCTCTACGTaGGAAGCACCAACCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVRNVST*EAPTTC Trigger: GCATGTGGTTGGTGCTTCCCACGTAGAGACATTTCT...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTAGCATGGTCATAGAGTaGCTACCCAGAAGAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSSMVIE*LPRRAF Trigger: GAATGCTCTTCTGGGTAGTCACTCTATGACCATGCT...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTGTGGGATTTCAATCATaGGAATCACTGGTGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSVGFQS*ESLVGV Trigger: AACCCCCACCAGTGATTCCCATGATTGAAATCCCAC...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAGGCACTGCTGTATACTaGTTGCTTGTTGGGATTAGA | + |
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Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVGTAVY*LLVGIR Trigger: TCTAATCCCAACAAGCAACCAGTATACAGCAGTGCC...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCCCAGAAGCCATTCCATaGCACGATCTACAGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFPEAIP*HDLQPQ Trigger: TTGTGGCTGTAGATCGTGTCATGGAATGGCTTCTGG...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCCCCACCATGATCACATaGAAGCCAAGGTGTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFPTMIT*KPRCSG Trigger: TCCTGAACACCTTGGCTTTCATGTGATCATGGTGGG...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAACTTCCAAGAAACATaGTGTAGTAGGCACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVNFQET*CSRHCC Trigger: ACAGCAGTGCCTACTACATCATGTTTCTTGGAAGTT...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR GCA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCAGTGCCGGAGAACCTTaGAATTGGAAAGGCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFSAGEP*NWKGHE Trigger: CTCATGGCCTTTCCAATTGCAAGGTTCTCCGGCACT...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR GCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTTTCTGGTTTGAGGGATaGGAAAGGATTAGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSFWFEG*ERISST Trigger: TGTGGAGCTAATCCTTTCGCATCCCTCAAACCAGAA...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTATTTTGGAGGATCAACTaGGACAGACCTGGTACATTA | + |
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Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVFWRIN*DRPGTL Trigger: TAATGTACCAGGTCTGTCCCAGTTGATCCTCCAAAA...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTTATTGTCCAAGGAAATaGAGCCAAGTGCATCAATGC | + |
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Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSYCPRK*SQVHQC Trigger: GCATTGATGCACTTGGCTTCATTTCCTTGGACAATA...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCTCGAAATCCAAAGCTTaGTACTGGGGTTCCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFSKSKA*YWGSPI Trigger: AATGGGGGAACCCCAGTATCAAGCTTTGGATTTCGA...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTTTCATGTTCAGCTTTTaGAGGATCAACTGGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSFMFSF*RINWDR Trigger: TCTGTCCCAGTTGATCCTCCAAAAGCTGAACATGAA...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCGCATGGAAACCTGGATaGAATGCAGCCACCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFAWKPG*NAATKS Trigger: AGATTTGGTGGCTGCATTCCATCCAGGTTTCCATGC...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTATGGAACATTTCTTGTTaGCATCGAAATCCAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GLAYHRVQSWQKSDINRVWNISC*HRNPKL Trigger: AAGCTTTGGATTTCGATGTCAACAAGAAATGTTCCA...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR TCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTAATAAGCACAGAATCTaGATGTGTCCTCCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSNKHRI*MCPPSS Trigger: AGAAGATGGAGGACACATTCAGATTCTGTGCTTATT...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR GCA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCAAGTTCACCAGAATCTaGAAAGAGGCTTCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFKFTRI*KEASSS Trigger: GGAACTGGAAGCCTCTTTGCAGATTCTGGTGAACTT...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR GCA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCAGTAATAGACATTTCTaGACCTCTTACAGTGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFSNRHF*TSYSAG Trigger: TCCGGCACTGTAAGAGGTGCAGAAATGTCTATTACT...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CCA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTAACAGTAATCAATGTTaGAATCTCATAGTCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: LAYHRVQSWQKSDINRVSNSNQC*NLIVTK Trigger: CTTCGTGACTATGAGATTCCAACATTGATTACTGTT...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 90 bp | GGGCTGGAGATACTGGAGACACTTCTGTGGGTGGGATTTCAATCATaGGAATCACTGGTGGGGGTTTCTTGTGCTTTCGCCGCCGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: GLEILETLLWVGFQS*ESLVGVSCAFAAVN Trigger: GTTCACGGCGGCGAAAGCACAAGAAACCCCCACCAGTGATTCCCATGATTGAAATCCCACCCACAGAAGTGTCTCCAGTATCTCCAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 90 bp | GGTAACCAAGCTTCCATCAAGCCTGGGGAGGCATGGAAACCTGGATaGAATGCAGCCACCAAATCTGGATGGGCCAGAATCCCAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GNQASIKPGEAWKPG*NAATKSGWARIPVS Trigger: AGAGACTGGGATTCTGGCCCATCCAGATTTGGTGGCTGCATTCCATCCAGGTTTCCATGCCTCCCCAGGCTTGATGGAAGCTTGGTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS TCA 90 bp | GTCCAAGGAAATGAAGCCAAGTGCATCAATGCTAGGGCCAGGTTTTaGGAGGGCTGGAGATACTGGAGACACTTCTGTGGGTGGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: VQGNEAKCINARARF*EGWRYWRHFCGWDF Trigger: GAAATCCCACCCACAGAAGTGTCTCCAGTATCTCCAGCCCTCTCAAAACCTGGCCCTAGCATTGATGCACTTGGCTTCATTTCCTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS TCA 90 bp | CACAAGACGGAGCTCTCGACAAACCTTCCTATGTGCTGGCCAATCTaGCCTCTGGCACTCTGTATCACAGTAATAGACATTTCTGCACCT | + |
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Preference number: 5 (lower is better) Translates to: HKTELSTNLPMCWPI*PLALCITVIDISAP Trigger: AGGTGCAGAAATGTCTATTACTGTGATACAGAGTGCCAGAGGTCAGATTGGCCAGCACATAGGAAGGTTTGTCGAGAGCTCCGTCTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS GCA 90 bp | CCAGAACGAATAAGAAATGTCTCTACGTGGGAAGCACCAACCACATaGAATGTGCTTCCTCCAGTCTTCCCAACATCTATTGCCACAGTC | + |
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Preference number: 5 (lower is better) Translates to: PERIRNVSTWEAPTT*NVLPPVFPTSIATV Trigger: GACTGTGGCAATAGATGTTGGGAAGACTGGAGGAAGCACATTGCATGTGGTTGGTGCTTCCCACGTAGAGACATTTCTTATTCGTTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTATCGAAATCCAAAGCTaGATACTGGGGTTCCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LAYHRVQSWQKSDINRVSIEIQS*ILGFPH Trigger: ATGGGGGAACCCCAGTATCAAGCTTTGGATTTCGAT...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | GGTTTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAGGGATTAGAATAGACTaGTTCTGGTTTGAGGGATGC | + |
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Preference number: 5 (lower is better) Translates to: GLAYHRVQSWQKSDINRVGIRID*FWFEGC Trigger: GCATCCCTCAAACCAGAACAAGTCTATTCTAATCCC...TACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS TCA 90 bp | GCACAGAATCTGAATGTGTCCTCCATCTTCTGGAACATTTCTTGTTaGCATCGAAATCCAAAGCTTGATACTGGGGTTCCCCCATTTATC | + |
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Preference number: 5 (lower is better) Translates to: AQNLNVSSIFWNISC*HRNPKLDTGVPPFI Trigger: GATAAATGGGGGAACCCCAGTATCAAGCTTTGGATTTCGATGTCAACAAGAAATGTTCCAGAAGATGGAGGACACATTCAGATTCTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 90 bp | ACTGCTGTATACTGGTTGCTTGTTGGGATTAGAATAGACTTGTTCTaGTTTGAGGGATGCGAAAGGATTAGCTCCACAAGCAATGATGTG | + |
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Preference number: 5 (lower is better) Translates to: TAVYWLLVGIRIDLF*FEGCERISSTSNDV Trigger: CACATCATTGCTTGTGGAGCTAATCCTTTCGCATCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTATACAGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 90 bp | AGGGGAACTTCCAAGAAACATGATGTAGTAGGCACTGCTGTATACTaGTTGCTTGTTGGGATTAGAATAGACTTGTTCTGGTTTGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RGTSKKHDVVGTAVY*LLVGIRIDLFWFEG Trigger: TCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTATACAGCAGTGCCTACTACATCATGTTTCTTGGAAGTTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTTTTCATGTTCAGCTTTaGGAGGATCAACTGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: LAYHRVQSWQKSDINRVSFHVQL*EDQLGQ Trigger: CTGTCCCAGTTGATCCTCCAAAAGCTGAACATGAAA...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTGGCTTCCAGTTCCTGTaGGCTGTAAACAGTAATCAA | + |
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Preference number: 5 (lower is better) Translates to: LAYHRVQSWQKSDINRVSGFQFL*AVNSNQ Trigger: TTGATTACTGTTTACAGCCAACAGGAACTGGAAGCC...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS GCA 90 bp | TGGTTGCTTGTTGGGATTAGAATAGACTTGTTCTGGTTTGAGGGATaGGAAAGGATTAGCTCCACAAGCAATGATGTGTGTATCCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: WLLVGIRIDLFWFEG*ERISSTSNDVCIQV Trigger: AACTTGGATACACACATCATTGCTTGTGGAGCTAATCCTTTCGCATCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS TCA 90 bp | AATTGGAAAGGCCATGAGGGAGCACTTTACAATAAGCACAGAATCTaGATGTGTCCTCCATCTTCTGGAACATTTCTTGTTGACATCGAA | + |
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Preference number: 5 (lower is better) Translates to: NWKGHEGALYNKHRI*MCPPSSGTFLVDIE Trigger: TTCGATGTCAACAAGAAATGTTCCAGAAGATGGAGGACACATTCAGATTCTGTGCTTATTGTAAAGTGCTCCCTCATGGCCTTTCCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 90 bp | ATAGTTTTTCATGTTCAGCTTTTGGAGGATCAACTGGGACAGACCTaGTACATTATTGTCCAAGGAAATGAAGCCAAGTGCATCAATGCT | + |
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Preference number: 5 (lower is better) Translates to: IVFHVQLLEDQLGQT*YIIVQGNEAKCINA Trigger: AGCATTGATGCACTTGGCTTCATTTCCTTGGACAATAATGTACCAGGTCTGTCCCAGTTGATCCTCCAAAAGCTGAACATGAAAAACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTCTGGAACATTTCTTGTaGACATCGAAATCCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: LAYHRVQSWQKSDINRVSLEHFL*TSKSKA Trigger: AGCTTTGGATTTCGATGTCAACAAGAAATGTTCCAG...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS TCA 90 bp | CTCCATCTTCTGGAACATTTCTTGTTGACATCGAAATCCAAAGCTTaGTACTGGGGTTCCCCCATTTATCACCAACTTGTATTCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: LHLLEHFLLTSKSKA*YWGSPIYHQLVFFI Trigger: TATGAAGAATACAAGTTGGTGATAAATGGGGGAACCCCAGTATCAAGCTTTGGATTTCGATGTCAACAAGAAATGTTCCAGAAGATGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCAGACCTGGTACATTATaGTCCAAGGAAATGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFRPGTL*SKEMKP Trigger: TGGCTTCATTTCCTTGGACAATAATGTACCAGGTCT...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | TTAGCATACCACAGGGTTCAAAGCTGGCAAAAATCTGACATCAACAGGGTAAGTCTTCTGGAACATTTCTaGTTGACATCGAAATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LAYHRVQSWQKSDINRVSLLEHF*LTSKSK Trigger: TTTGGATTTCGATGTCAACAAGAAATGTTCCAGAAG...ACTTACCCTGTTGATGTCAGATTTTTGCCAGCTTTGAACCCTGTGGTATGCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS-3UTR CAA 90 bp | CAGGGTAAGTTGATTAAGCTTTCATTTTCCAGGCATTCAGTAAAGACTTGGTTCACTGCTGTATACTGGTaGCTTGTTGGGATTAGAATA | + |
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Preference number: 5 (lower is better) Translates to: QGKLIKLSFSRHSVKTWFTAVYW*LVGIRI Trigger: TATTCTAATCCCAACAAGCAACCAGTATACAGCAGT...GAACCAAGTCTTTACTGAATGCCTGGAAAATGAAAGCTTAATCAACTTACCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | CCAAGCTTCCATCAAGCCTGGGGAGGCATGGAAACCTaGATGGAATGCAGCCACCAAATCTGGATGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PSFHQAWGGMET*MECSHQIWMGQ Trigger: CTGGCCCATCCAGATTTGGTGGCTGCATTCCATCCAGGTTTCCATGCCTCCCCAGGCTTGATGGAAGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 72 bp | CATGCAATGTGCTTCCTCCAGTCTTCCCAACATCTATaGCCACAGTCCGAAGCCCTAAGCCCAGGGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: HAMCFLQSSQHL*PQSEALSPGSR Trigger: CCTTGACCCTGGGCTTAGGGCTTCGGACTGTGGCAATAGATGTTGGGAAGACTGGAGGAAGCACATTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | GTTTTGAGAGGGCTGGAGATACTGGAGACACTTCTGTaGGTGGGATTTCAATCATGGGAATCACTGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VLRGLEILETLL*VGFQSWESLVG Trigger: CCCCACCAGTGATTCCCATGATTGAAATCCCACCCACAGAAGTGTCTCCAGTATCTCCAGCCCTCTCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | ATGTTGGAATCTCATAGTCACGAAGTAGCAGCAGGGTaGGTAACCAAGCTTCCATCAAGCCTGGGGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: MLESHSHEVAAG*VTKLPSSLGRH Trigger: ATGCCTCCCCAGGCTTGATGGAAGCTTGGTTACCCACCCTGCTGCTACTTCGTGACTATGAGATTCCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS GCA 72 bp | ATGTCTCTACGTGGGAAGCACCAACCACATGCAATGTaGTTCCTCCAGTCTTCCCAACATCTATTGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: MSLRGKHQPHAM*FLQSSQHLLPQ Trigger: CTGTGGCAATAGATGTTGGGAAGACTGGAGGAAGCACATTGCATGTGGTTGGTGCTTCCCACGTAGAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | ATACTGGAGACACTTCTGTGGGTGGGATTTCAATCATaGGAATCACTGGTGGGGGTTTCTTGTGCTTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: ILETLLWVGFQS*ESLVGVSCAFA Trigger: GGCGAAAGCACAAGAAACCCCCACCAGTGATTCCCATGATTGAAATCCCACCCACAGAAGTGTCTCCAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | TTCTGCACCTCTTACAGTGCCGGAGAACCTTGCAATTaGAAAGGCCATGAGGGAGCACTTTACAATAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: FCTSYSAGEPCN*KGHEGALYNKH Trigger: GTGCTTATTGTAAAGTGCTCCCTCATGGCCTTTCCAATTGCAAGGTTCTCCGGCACTGTAAGAGGTGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 90 bp | ATGTTCAGCTTTTGGAGGATCAACTGGGACAGACCTGGTACATTATaGTCCAAGGAAATGAAGCCAAGTGCATCAATGCTAGGGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: MFSFWRINWDRPGTL*SKEMKPSASMLGPG Trigger: ACCTGGCCCTAGCATTGATGCACTTGGCTTCATTTCCTTGGACAATAATGTACCAGGTCTGTCCCAGTTGATCCTCCAAAAGCTGAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS TCA 72 bp | GAGCTCTCGACAAACCTTCCTATGTGCTGGCCAATCTaGCCTCTGGCACTCTGTATCACAGTAATAGACATT | + |
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Preference number: 6 (lower is better) Translates to: ELSTNLPMCWPI*PLALCITVIDI Trigger: AATGTCTATTACTGTGATACAGAGTGCCAGAGGTCAGATTGGCCAGCACATAGGAAGGTTTGTCGAGAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | CATGTTCAGCTTTTGGAGGATCAACTGGGACAGACCTaGTACATTATTGTCCAAGGAAATGAAGCCAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: HVQLLEDQLGQT*YIIVQGNEAKC Trigger: GCACTTGGCTTCATTTCCTTGGACAATAATGTACCAGGTCTGTCCCAGTTGATCCTCCAAAAGCTGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 90 bp | GTAGGCACTGCTGTATACTGGTTGCTTGTTGGGATTAGAATAGACTaGTTCTGGTTTGAGGGATGCGAAAGGATTAGCTCCACAAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VGTAVYWLLVGIRID*FWFEGCERISSTSN Trigger: ATTGCTTGTGGAGCTAATCCTTTCGCATCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTATACAGCAGTGCCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | TACTGGTTGCTTGTTGGGATTAGAATAGACTTGTTCTaGTTTGAGGGATGCGAAAGGATTAGCTCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: YWLLVGIRIDLF*FEGCERISSTS Trigger: GCTTGTGGAGCTAATCCTTTCGCATCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 72 bp | GCTGTATACTGGTTGCTTGTTGGGATTAGAATAGACTaGTTCTGGTTTGAGGGATGCGAAAGGATTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AVYWLLVGIRID*FWFEGCERISS Trigger: GGAGCTAATCCTTTCGCATCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTATACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 90 bp | GGAACTTCCAAGAAACATGATGTAGTAGGCACTGCTGTATACTGGTaGCTTGTTGGGATTAGAATAGACTTGTTCTGGTTTGAGGGATGC | + |
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Preference number: 6 (lower is better) Translates to: GTSKKHDVVGTAVYW*LVGIRIDLFWFEGC Trigger: GCATCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTATACAGCAGTGCCTACTACATCATGTTTCTTGGAAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 72 bp | TTTTGGAGGATCAACTGGGACAGACCTGGTACATTATaGTCCAAGGAAATGAAGCCAAGTGCATCAATGCTA | + |
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Preference number: 6 (lower is better) Translates to: FWRINWDRPGTL*SKEMKPSASML Trigger: TAGCATTGATGCACTTGGCTTCATTTCCTTGGACAATAATGTACCAGGTCTGTCCCAGTTGATCCTCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS TCA 72 bp | CTGGAACATTTCTTGTTGACATCGAAATCCAAAGCTTaGTACTGGGGTTCCCCCATTTATCACCAACTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LEHFLLTSKSKA*YWGSPIYHQLV Trigger: TACAAGTTGGTGATAAATGGGGGAACCCCAGTATCAAGCTTTGGATTTCGATGTCAACAAGAAATGTTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CCA 72 bp | TCCAAGAAACATGATGTAGTAGGCACTGCTGTATACTaGTTGCTTGTTGGGATTAGAATAGACTTGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SKKHDVVGTAVY*LLVGIRIDLFW Trigger: CCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTATACAGCAGTGCCTACTACATCATGTTTCTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 72 bp | TCTGGAACATTTCTTGTTGACATCGAAATCCAAAGCTaGATACTGGGGTTCCCCCATTTATCACCAACTTGT | + |
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Preference number: 6 (lower is better) Translates to: SGTFLVDIEIQS*ILGFPHLSPTC Trigger: ACAAGTTGGTGATAAATGGGGGAACCCCAGTATCAAGCTTTGGATTTCGATGTCAACAAGAAATGTTCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 90 bp | CCTCCATCTTCTGGAACATTTCTTGTTGACATCGAAATCCAAAGCTaGATACTGGGGTTCCCCCATTTATCACCAACTTGTATTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PPSSGTFLVDIEIQS*ILGFPHLSPTCILH Trigger: ATGAAGAATACAAGTTGGTGATAAATGGGGGAACCCCAGTATCAAGCTTTGGATTTCGATGTCAACAAGAAATGTTCCAGAAGATGGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 72 bp | AAGAAACATGATGTAGTAGGCACTGCTGTATACTGGTaGCTTGTTGGGATTAGAATAGACTTGTTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: KKHDVVGTAVYW*LVGIRIDLFWF Trigger: AAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAGTATACAGCAGTGCCTACTACATCATGTTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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| CDS CAA 90 bp | ATTTATCACCAACTTGTATTCTTCATAGTTTTTCATGTTCAGCTTTaGGAGGATCAACTGGGACAGACCTGGTACATTATTGTCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: IYHQLVFFIVFHVQL*EDQLGQTWYIIVQG Trigger: TCCTTGGACAATAATGTACCAGGTCTGTCCCAGTTGATCCTCCAAAAGCTGAACATGAAAAACTATGAAGAATACAAGTTGGTGATAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022353.5 |
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