Pregenerated sensors for MSRB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051236Ensembl transcript IDs: ENSMUST00000092143.12, ENSMUST00000130950.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACGTGGTTCCTGCCTACTAGCCCATCTCTGCATGGCCCAACGGTaGAGTCAGAGCTGGGGTGTTGACAAGGAAGACCGTGCAACCTCC | + |
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Preference number: 1 (lower is better) Translates to: GRGSCLLAHLCMAQR*SQSWGVDKEDRATS Trigger: GGAGGTTGCACGGTCTTCCTTGTCAACACCCCAGCTCTGACTGCACCGTTGGGCCATGCAGAGATGGGCTAGTAGGCAGGAACCACGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 90 bp | GCACAGACGTCTCTAGAACTGGGTGATACTGAAGACTCGGCAGGATaGCAGGACCTTCAGGAGGTACCTGAGAAAGGCAGAGCTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: AQTSLELGDTEDSAG*QDLQEVPEKGRAAG Trigger: TCCAGCAGCTCTGCCTTTCTCAGGTACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAGTTCTAGAGACGTCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 90 bp | ATGTTGCTGCTTCCTTCCGATCTGTTCTGTGCACTCATAGGGACGTaGTTCCTGCCTACTAGCCCATCTCTGCATGGCCCAACGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: MLLLPSDLFCALIGT*FLPTSPSLHGPTVQ Trigger: CTGCACCGTTGGGCCATGCAGAGATGGGCTAGTAGGCAGGAACCACGTCCCTATGAGTGCACAGAACAGATCGGAAGGAAGCAGCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 90 bp | TCTTCTTTGTCTACTCCAACACTCTGGCTTATATCCAAGGGACCCTaGGAAGGCCACCACACAGATGGGAGTGGGCAGAAAGGGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SSLSTPTLWLISKGP*EGHHTDGSGQKGLC Trigger: ACACAGCCCTTTCTGCCCACTCCCATCTGTGTGGTGGCCTTCCCAGGGTCCCTTGGATATAAGCCAGAGTGTTGGAGTAGACAAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR TCA 90 bp | AATGGCTTGTCCCTTGTACACACAGTGAAGTGTGGACCTTGGGCCTaGCTATTCTGTCTTAATCCCCGACATCCTTGCTCCGACCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: NGLSLVHTVKCGPWA*LFCLNPRHPCSDLL Trigger: CAGAAGGTCGGAGCAAGGATGTCGGGGATTAAGACAGAATAGTCAGGCCCAAGGTCCACACTTCACTGTGTGTACAAGGGACAAGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 90 bp | GTCTGGCTTTCGGCTGTTTCCATACCAACCAGCCAAGTGCACCTCTaGTTCTTCCATTGCAAATTTGGCCTGCTCTGTGCAATTACAACC | + |
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Preference number: 1 (lower is better) Translates to: VWLSAVSIPTSQVHL*FFHCKFGLLCAITT Trigger: GGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATGGAAACAGCCGAAAGCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 90 bp | GCTCGTCCAGATGGAGTTCACATGAGGCATGCAGAGAAAGGCTTATaGAGAGGCAATGGGCAAGCATTCTTCTTTGTGAACTTTGGACAA | + |
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Preference number: 1 (lower is better) Translates to: ARPDGVHMRHAEKGL*RGNGQAFFFVNFGQ Trigger: TTGTCCAAAGTTCACAAAGAAGAATGCTTGCCCATTGCCTCTGCATAAGCCTTTCTCTGCATGCCTCATGTGAACTCCATCTGGACGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 90 bp | GGAAATCTTCTAAAATGCTCGTCCAGATGGAGTTCACATGAGGCATaGAGAGAAAGGCTTATGCAGAGGCAATGGGCAAGCATTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: GNLLKCSSRWSSHEA*RERLMQRQWASILL Trigger: AAGAAGAATGCTTGCCCATTGCCTCTGCATAAGCCTTTCTCTGCATGCCTCATGTGAACTCCATCTGGACGAGCATTTTAGAAGATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 90 bp | AGCATTCAAAAACCACAACGCTCACTACTGAGACACCTGCCATATTaGTACAAGATAAAGGTCTGGCTTTCGGCTGTTTCCATACCAACC | + |
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Preference number: 1 (lower is better) Translates to: SIQKPQRSLLRHLPY*YKIKVWLSAVSIPT Trigger: GGTTGGTATGGAAACAGCCGAAAGCCAGACCTTTATCTTGTAGCAATATGGCAGGTGTCTCAGTAGTGAGCGTTGTGGTTTTTGAATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 90 bp | CAACCAGCCAAGTGCACCTCTGCTTCTTCCATTGCAAATTTGGCCTaGTCTGTGCAATTACAACCGGATCAGTGTGATTTTAAAATACTG | + |
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Preference number: 1 (lower is better) Translates to: QPAKCTSASSIANLA*SVQLQPDQCDFKIL Trigger: CAGTATTTTAAAATCACACTGATCCGGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR TCA 90 bp | CTCAGCTCACTGAGCTCCATATCCTGCGAAAGTAAATCTAGTCCTTaGCAGCTGACATTAGCGCTCCCTGACATTTTAGCAATATATTTC | + |
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Preference number: 1 (lower is better) Translates to: LSSLSSISCESKSSP*QLTLALPDILAIYF Trigger: GAAATATATTGCTAAAATGTCAGGGAGCGCTAATGTCAGCTGTCAAGGACTAGATTTACTTTCGCAGGATATGGAGCTCAGTGAGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 90 bp | AAAGGAGGGTACCTACAAGGACAAAACTTGAAGGAAGGTATGCATTaGAAGAAAATGATGCCAAGGCTACATAGAAGCTTACCAAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: KGGYLQGQNLKEGMH*KKMMPRLHRSLPRS Trigger: GCTTCTTGGTAAGCTTCTATGTAGCCTTGGCATCATTTTCTTCCAATGCATACCTTCCTTCAAGTTTTGTCCTTGTAGGTACCCTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 90 bp | TACATATATAAAAGAAGTGAAGAGTTTAAATACTCAGAAATACATTaGATGTTGCTGCTTCCTTCCGATCTGTTCTGTGCACTCATAGGG | + |
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Preference number: 1 (lower is better) Translates to: YIYKRSEEFKYSEIH*MLLLPSDLFCALIG Trigger: CCCTATGAGTGCACAGAACAGATCGGAAGGAAGCAGCAACATCCAATGTATTTCTGAGTATTTAAACTCTTCACTTCTTTTATATATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR TCA 90 bp | CCGGCTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCTGCGGCAACCTTCCCTaGGTCCTCTCACATCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PAFIASHCVCNCHSPVLICGNLP*VLSHLA Trigger: TGCCAGATGTGAGAGGACTCAGGGAAGGTTGCCGCA...GATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CAA 90 bp | AGGTACCTGAGAAAGGCAGAGCTGCTGGATATGGGTAGTCTCAGCTaGCTTGCCCCGGCTTTTATTGCTTCCCACTGTGTCTGCAACTGT | + |
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Preference number: 2 (lower is better) Translates to: RYLRKAELLDMGSLS*LAPAFIASHCVCNC Trigger: ACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGGGGCAAGCAAGCTGAGACTACCCATATCCAGCAGCTCTGCCTTTCTCAGGTACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CAA 90 bp | CACTCCATCTTTATCGCAAAGGCCACATGTCTAGATGCTCTGTCCTaGCCAGTTCTCCTCTCTGCTGCTGAGCACCAGCTCTATGATGTC | + |
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Preference number: 2 (lower is better) Translates to: HSIFIAKATCLDALS*PVLLSAAEHQLYDV Trigger: GACATCATAGAGCTGGTGCTCAGCAGCAGAGAGGAGAACTGGCAAGGACAGAGCATCTAGACATGTGGCCTTTGCGATAAAGATGGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR TCA 90 bp | TACAAGATAAAGGTCTGGCTTTCGGCTGTTTCCATACCAACCAGCCAAGTGCACCCCTTGTACACACAGTaGAGTGTGGACCTTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: YKIKVWLSAVSIPTSQVHPLYTQ*SVDLGP Trigger: AGGCCCAAGGTCCACACTTCACTGTGTGTACAAGGG...GTGCACTTGGCTGGTTGGTATGGAAACAGCCGAAAGCCAGACCTTTATCTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CCA 90 bp | CTAGAACTGGGTGATACTGAAGACTCGGCAGGATGGCAGGACCTTCAGGAGGTAAAATGCTCGTCCAGATaGAGTTCACATGAGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: LELGDTEDSAGWQDLQEVKCSSR*SSHEAC Trigger: GCATGCCTCATGTGAACTCCATCTGGACGAGCATTT...TACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAGTTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CAA 90 bp | GGCTGTTTCCATACCAACCAGCCAAGTGCACCTCTGCTTCTTCCATaGCAAATTTGGCCTGCTCTGTGCAATTACAACCGGATCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GCFHTNQPSAPLLLP*QIWPALCNYNRISV Trigger: CACACTGATCCGGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATGGAAACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTGATACTGAAGACTCGGCAGGATGGCAGGACCTTCAGGAGGTACCTGAGCCTTTTTGCACAGCATaGGATTATTTAGTGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LGDTEDSAGWQDLQEVPEPFCTA*DYLVLK Trigger: CTTGAGCACTAAATAATCCCATGCTGTGCAAAAAGG...CTCAGGTACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR GCA 90 bp | CCGGCTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCAAAGCCATCTCCGTTTaGAAGAGCTACACACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: PAFIASHCVCNCHSPVLIKAISV*KSYTQF Trigger: GAACTGTGTGTAGCTCTTGCAAACGGAGATGGCTTT...GATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR GCA 90 bp | CCGGCTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCCTCTGCTTCTTCCATTaGAAATTTGGCCTGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PAFIASHCVCNCHSPVLILCFFH*KFGLLC Trigger: ACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAG...GATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CCA 90 bp | CCGGCTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCCTTCCATTGCAAATTTaGCCTGCTCTGTGCAATTAC | + |
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Preference number: 2 (lower is better) Translates to: PAFIASHCVCNCHSPVLILPLQI*PALCNY Trigger: GTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAG...GATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGATATGGGTAGTCTCAGCTTGCTTGCCCCGGCTTTTATTGCTTCCCACTACAAGATAAAGGTCTaGCTTTCGGCTGTTTCCATA | + |
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Preference number: 2 (lower is better) Translates to: LLDMGSLSLLAPAFIASHYKIKV*LSAVSI Trigger: TATGGAAACAGCCGAAAGCCAGACCTTTATCTTGTA...GTGGGAAGCAATAAAAGCCGGGGCAAGCAAGCTGAGACTACCCATATCCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR TCA 90 bp | CCGGCTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCTACAAGGACAAAACTTaGAGGAAGGTATGCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: PAFIASHCVCNCHSPVLIYKDKT*RKVCIG Trigger: TCCAATGCATACCTTCCTTCAAGTTTTGTCCTTGTA...GATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR TCA 90 bp | CTATTGTGTACACGAAGATATAGGCACAATGGGGCTAAATGGCTTGTCCCTTGTTGTGGACCTTGGGCCTaGCTATTCTGTCTTAATCCC | + |
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Preference number: 2 (lower is better) Translates to: LLCTRRYRHNGAKWLVPCCGPWA*LFCLNP Trigger: GGGATTAAGACAGAATAGTCAGGCCCAAGGTCCACA...ACAAGGGACAAGCCATTTAGCCCCATTGTGCCTATATCTTCGTGTACACAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CCA 90 bp | TGCTACAAGATAAAGGTCTGGCTTTCGGCTGTTTCCATACCAACCAGCCAAGTGGAGTCCTCTCACATCTaGCAACAATGTAACATAAGG | + |
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Preference number: 2 (lower is better) Translates to: CYKIKVWLSAVSIPTSQVESSHI*QQCNIR Trigger: CCTTATGTTACATTGTTGCCAGATGTGAGAGGACTC...CACTTGGCTGGTTGGTATGGAAACAGCCGAAAGCCAGACCTTTATCTTGTAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCATACCAACCAGCCAAGTGCACCTCTGCTTCTTCCATTGCAAATTTGGCTGCTATGTGAAAGTCTaGTTTAGGTGCAGTACCTGT | + |
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Preference number: 2 (lower is better) Translates to: VSIPTSQVHLCFFHCKFGCYVKV*FRCSTC Trigger: ACAGGTACTGCACCTAAACCAGACTTTCACATAGCA...GCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CAA 90 bp | TGCTATGTGAAAGTCTGGTTTAGGTGCAGTACCTGTGAGATCCTGTaGGCCTTTTTGCACAGCATGGGATTATTTAGTGCTCAAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: CYVKVWFRCSTCEIL*AFLHSMGLFSAQDF Trigger: GAAGTCTTGAGCACTAAATAATCCCATGCTGTGCAAAAAGGCCAACAGGATCTCACAGGTACTGCACCTAAACCAGACTTTCACATAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR TCA 90 bp | CTATTGTGTACACGAAGATATAGGCACAATGGGGCTAAATGGCTTGTCCCTTGTTGCATTGGAAGAAAATaGTGCCAAGGCTACATAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLCTRRYRHNGAKWLVPCCIGRK*CQGYIE Trigger: TTCTATGTAGCCTTGGCATCATTTTCTTCCAATGCA...ACAAGGGACAAGCCATTTAGCCCCATTGTGCCTATATCTTCGTGTACACAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR GCA 90 bp | CTATTGTGTACACGAAGATATAGGCACAATGGGGCTAAATGGCTTGTCCCTTGTTCCTGTTGGCCTTTTTaGACAGCATGGGATTATTTA | + |
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Preference number: 2 (lower is better) Translates to: LLCTRRYRHNGAKWLVPCSCWPF*TAWDYL Trigger: TAAATAATCCCATGCTGTGCAAAAAGGCCAACAGGA...ACAAGGGACAAGCCATTTAGCCCCATTGTGCCTATATCTTCGTGTACACAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR TCA 90 bp | CATACTAGGTCTTCTCTGATCTCTCTCTTTCCTACTGATGAAGTGTGTTGTCCCTGCCCTTATAGCTTCTaGAAAAATAGCTCTGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: HTRSSLISLFPTDEVCCPCPYSF*KNSSVK Trigger: CTTAACAGAGCTATTTTTTCAGAAGCTATAAGGGCA...GGGACAACACACTTCATCAGTAGGAAAGAGAGAGATCAGAGAAGACCTAGTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CAA 90 bp | GGTTCCTGCCTACTAGCCCATCTCTGCATGGCCCAACGGTGCAGTCAGAGCTGGCTAGATGCTCTGTCCTaGCCAGTTCTCCTCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GSCLLAHLCMAQRCSQSWLDALS*PVLLSA Trigger: AGCAGAGAGGAGAACTGGCAAGGACAGAGCATCTAG...CCAGCTCTGACTGCACCGTTGGGCCATGCAGAGATGGGCTAGTAGGCAGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 72 bp | TCCTGCCTACTAGCCCATCTCTGCATGGCCCAACGGTaGAGTCAGAGCTGGGGTGTTGACAAGGAAGACCGT | + |
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Preference number: 3 (lower is better) Translates to: SCLLAHLCMAQR*SQSWGVDKEDR Trigger: ACGGTCTTCCTTGTCAACACCCCAGCTCTGACTGCACCGTTGGGCCATGCAGAGATGGGCTAGTAGGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CAA 90 bp | GGTTCCTGCCTACTAGCCCATCTCTGCATGGCCCAACGGTGCAGTCAGAGCTGGCCCAGAGGTAATGTTTaGCATCTCTGCGGCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: GSCLLAHLCMAQRCSQSWPRGNV*HLCGNL Trigger: AAGGTTGCCGCAGAGATGCAAAACATTACCTCTGGG...CCAGCTCTGACTGCACCGTTGGGCCATGCAGAGATGGGCTAGTAGGCAGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR TCA 72 bp | AGACTCGGCAGGATGGCAGGACCTTCAGGAGGTACCTaGGAAAGGCAGAGCTGCTGGATATGGGTAGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: RLGRMAGPSGGT*ERQSCWIWVVS Trigger: TGAGACTACCCATATCCAGCAGCTCTGCCTTTCTCAGGTACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 72 bp | CTTCCTTCCGATCTGTTCTGTGCACTCATAGGGACGTaGTTCCTGCCTACTAGCCCATCTCTGCATGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LPSDLFCALIGT*FLPTSPSLHGP Trigger: TGGGCCATGCAGAGATGGGCTAGTAGGCAGGAACCACGTCCCTATGAGTGCACAGAACAGATCGGAAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 72 bp | TCTACTCCAACACTCTGGCTTATATCCAAGGGACCCTaGGAAGGCCACCACACAGATGGGAGTGGGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: STPTLWLISKGP*EGHHTDGSGQK Trigger: TTTCTGCCCACTCCCATCTGTGTGGTGGCCTTCCCAGGGTCCCTTGGATATAAGCCAGAGTGTTGGAGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR-3UTR CAA 90 bp | GGTTCCTGCCTACTAGCCCATCTCTGCATGGCCCAACGGTGCAGTCAGAGCTGGGAAGGAAGGTATGCATaGGAAGAAAATGATGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: GSCLLAHLCMAQRCSQSWEGRYA*EENDAK Trigger: CTTGGCATCATTTTCTTCCAATGCATACCTTCCTTC...CCAGCTCTGACTGCACCGTTGGGCCATGCAGAGATGGGCTAGTAGGCAGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 72 bp | GAAAGGCAGAGCTGCTGGATATGGGTAGTCTCAGCTTaGTTGCCCCGGCTTTTATTGCTTCCCACTGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ERQSCWIWVVSA*LPRLLLLPTVS Trigger: AGACACAGTGGGAAGCAATAAAAGCCGGGGCAAGCAAGCTGAGACTACCCATATCCAGCAGCTCTGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 72 bp | TCTCTAGAACTGGGTGATACTGAAGACTCGGCAGGATaGCAGGACCTTCAGGAGGTACCTGAGAAAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SLELGDTEDSAG*QDLQEVPEKGR Trigger: TCTGCCTTTCTCAGGTACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAGTTCTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR TCA 72 bp | TCCCTTGTACACACAGTGAAGTGTGGACCTTGGGCCTaGCTATTCTGTCTTAATCCCCGACATCCTTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: SLVHTVKCGPWA*LFCLNPRHPCS Trigger: GGAGCAAGGATGTCGGGGATTAAGACAGAATAGTCAGGCCCAAGGTCCACACTTCACTGTGTGTACAAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 72 bp | TCGGCTGTTTCCATACCAACCAGCCAAGTGCACCTCTaGTTCTTCCATTGCAAATTTGGCCTGCTCTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SAVSIPTSQVHL*FFHCKFGLLCA Trigger: TGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATGGAAACAGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 72 bp | CAGCCAAGTGCACCTCTGCTTCTTCCATTGCAAATTTaGCCTGCTCTGTGCAATTACAACCGGATCAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: QPSAPLLLPLQI*PALCNYNRISV Trigger: CACACTGATCCGGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR TCA 72 bp | CCCACAGATCACATACACCTCACCACCTCAGCTCACTaGGCTCCATATCCTGCGAAAGTAAATCTAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PTDHIHLTTSAH*APYPAKVNLVL Trigger: AAGGACTAGATTTACTTTCGCAGGATATGGAGCTCAGTGAGCTGAGGTGGTGAGGTGTATGTGATCTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR CCA 72 bp | CTGAGACACCTGCCATATTGCTACAAGATAAAGGTCTaGCTTTCGGCTGTTTCCATACCAACCAGCCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: LRHLPYCYKIKV*LSAVSIPTSQV Trigger: CACTTGGCTGGTTGGTATGGAAACAGCCGAAAGCCAGACCTTTATCTTGTAGCAATATGGCAGGTGTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 72 bp | GATGGAGTTCACATGAGGCATGCAGAGAAAGGCTTATaGAGAGGCAATGGGCAAGCATTCTTCTTTGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: DGVHMRHAEKGL*RGNGQAFFFVN Trigger: GTTCACAAAGAAGAATGCTTGCCCATTGCCTCTGCATAAGCCTTTCTCTGCATGCCTCATGTGAACTCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| 3UTR GCA 72 bp | AAACCACAACGCTCACTACTGAGACACCTGCCATATTaGTACAAGATAAAGGTCTGGCTTTCGGCTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KPQRSLLRHLPY*YKIKVWLSAVS Trigger: GGAAACAGCCGAAAGCCAGACCTTTATCTTGTAGCAATATGGCAGGTGTCTCAGTAGTGAGCGTTGTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CCA 72 bp | TTGCACGGGGGAAATCTTCTAAAATGCTCGTCCAGATaGAGTTCACATGAGGCATGCAGAGAAAGGCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: LHGGNLLKCSSR*SSHEACRERLM Trigger: CATAAGCCTTTCTCTGCATGCCTCATGTGAACTCCATCTGGACGAGCATTTTAGAAGATTTCCCCCGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR TCA 72 bp | TCTGTCCTTAGCCACCCTACATGGAATCCTTCGAGATaGTGTGAAAACTTTATGGAAGTCTGGAAGCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SVLSHPTWNPSR*CENFMEVWKPH Trigger: GTGAGGCTTCCAGACTTCCATAAAGTTTTCACATCATCTCGAAGGATTCCATGTAGGGTGGCTAAGGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR TCA 72 bp | CTGAGCTCCATATCCTGCGAAAGTAAATCTAGTCCTTaGCAGCTGACATTAGCGCTCCCTGACATTTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSISCESKSSP*QLTLALPDILA Trigger: TGCTAAAATGTCAGGGAGCGCTAATGTCAGCTGTCAAGGACTAGATTTACTTTCGCAGGATATGGAGCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR GCA 72 bp | AAATATAAAATAAAGACCTGCCCAGAGGTAATGTTTTaGATCTCTGCGGCAACCTTCCCTGAGTCCTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KYKIKTCPEVMF*ISAATFPESSH Trigger: GTGAGAGGACTCAGGGAAGGTTGCCGCAGAGATGCAAAACATTACCTCTGGGCAGGTCTTTATTTTATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR GCA 72 bp | AAGTGCACCTCTGCTTCTTCCATTGCAAATTTGGCCTaGTCTGTGCAATTACAACCGGATCAGTGTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: KCTSASSIANLA*SVQLQPDQCDF Trigger: AAAATCACACTGATCCGGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CCA 72 bp | CATGAGGCATGCAGAGAAAGGCTTATGCAGAGGCAATaGGCAAGCATTCTTCTTTGTGAACTTTGGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HEACRERLMQRQ*ASILLCELWTK Trigger: TTTTGTCCAAAGTTCACAAAGAAGAATGCTTGCCCATTGCCTCTGCATAAGCCTTTCTCTGCATGCCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR GCA 72 bp | CCTCTGCTTCTTCCATTGCAAATTTGGCCTGCTCTGTaGAATTACAACCGGATCAGTGTGATTTTAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: PLLLPLQIWPAL*NYNRISVILKY Trigger: GTATTTTAAAATCACACTGATCCGGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR TCA 72 bp | GAAGGAAGAGTAAAACAACCTAGCATCTCTGTGGAGTaGGAACCTCCTTATTTATCTTCTTTGTCTACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EGRVKQPSISVE*EPPYLSSLSTP Trigger: TGGAGTAGACAAAGAAGATAAATAAGGAGGTTCTCACTCCACAGAGATGCTAGGTTGTTTTACTCTTCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR CCA 90 bp | GGTTCCTGCCTACTAGCCCATCTCTGCATGGCCCAACGGTGCAGTCAGAGCTGGTCTGTCTGCTGCTGCTaGGCTGCCGCTCTCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSCLLAHLCMAQRCSQSWSVCCC*AAALFD Trigger: ATCAAAGAGAGCGGCAGCCCAGCAGCAGCAGACAGA...CCAGCTCTGACTGCACCGTTGGGCCATGCAGAGATGGGCTAGTAGGCAGGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGATACTGAAGACTCGGCAGGATGGCAGGACCTTCAGGAGGTACCTGAGAGCTCTGTCTGCTGCTaGTGGGCTGCCGCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGDTEDSAGWQDLQEVPESSVCC*WAAALF Trigger: AAAGAGAGCGGCAGCCCAGCAGCAGCAGACAGAGCT...CTCAGGTACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | CTAGAACTGGGTGATACTGAAGACTCGGCAGGATGGCAGGACCTTCAGGAGGTACTCAGCTCTGTCTGCTaGTGCTGGGCTGCCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LELGDTEDSAGWQDLQEVLSSVC*CWAAAL Trigger: GAGAGCGGCAGCCCAGCAGCAGCAGACAGAGCTGAG...TACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAGTTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCGAAGGCAGGCCAGCCTaGGGGGAGCCCGCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EREREREREKHFQQHKLPEGRPA*GEPAGS Trigger: AGAGCCTGCGGGCTCCCCTCAGGCTGGCCTGCCTTC...GGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130950.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTTTAGGTGCAGTACCTGTGAGATCCTGTTGGCCTTTTTGCACAGCATGCAGCTCAGCTCTGTCTaGTGCTGCTGGGCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VWFRCSTCEILLAFLHSMQLSSV*CCWAAA Trigger: AGCGGCAGCCCAGCAGCAGCAGACAGAGCTGAGCTG...CATGCTGTGCAAAAAGGCCAACAGGATCTCACAGGTACTGCACCTAAACCAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | AGGCAGAGCTGCTGGATATGGGTAGTCTCAGCTTGCTaGCCCCGGCTTTTATTGCTTCCCACTGTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQSCWIWVVSAC*PRLLLLPTVSA Trigger: TGCAGACACAGTGGGAAGCAATAAAAGCCGGGGCAAGCAAGCTGAGACTACCCATATCCAGCAGCTCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | TCTGCATGGCCCAACGGTGCAGTCAGAGCTGGGGTGTaGACAAGGAAGACCGTGCAACCTCCTGTGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAWPNGAVRAGV*TRKTVQPPVLN Trigger: ATTTAACACAGGAGGTTGCACGGTCTTCCTTGTCAACACCCCAGCTCTGACTGCACCGTTGGGCCATGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | CACATGAGGCATGCAGAGAAAGGCTTATGCAGAGGCAATGGGCAAGCATTCTTCGATGCCGCTTCCTTCTaGCTCACTGCTGTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMRHAEKGLCRGNGQAFFDAASF*LTAVCR Trigger: CCTGCAGACAGCAGTGAGGCAGAAGGAAGCGGCATC...GAAGAATGCTTGCCCATTGCCTCTGCATAAGCCTTTCTCTGCATGCCTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR CCA 90 bp | CTAGAACTGGGTGATACTGAAGACTCGGCAGGATGGCAGGACCTTCAGGAGGTACACACTGAGAACAGCTaGTTTCCACCCTGTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LELGDTEDSAGWQDLQEVHTENS*FPPCAS Trigger: GGATGCACAGGGTGGAAACCAGCTGTTCTCAGTGTG...TACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAGTTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | TTTATCGCAAAGGCCACATGTCTAGATGCTCTGTCCTaGCCAGTTCTCCTCTCTGCTGCTGAGCACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIAKATCLDALS*PVLLSAAEHQL Trigger: GAGCTGGTGCTCAGCAGCAGAGAGGAGAACTGGCAAGGACAGAGCATCTAGACATGTGGCCTTTGCGATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | ATATGGGTAGTCTCAGCTTGCTTGCCCCGGCTTTTATaGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWVVSACLPRLL*LPTVSATVTRL Trigger: CAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGGGGCAAGCAAGCTGAGACTACCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | AGAAAGGCAGAGCTGCTGGATATGGGTAGTCTCAGCTaGCTTGCCCCGGCTTTTATTGCTTCCCACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKAELLDMGSLS*LAPAFIASHCV Trigger: GACACAGTGGGAAGCAATAAAAGCCGGGGCAAGCAAGCTGAGACTACCCATATCCAGCAGCTCTGCCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCTCTCAGCTCTGTCTGCTaGTGCTGGGCTGCCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERNIFSSINCPLSSVC*CWAAAL Trigger: GAGAGCGGCAGCCCAGCAGCAGCAGACAGAGCTGAG...AGGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCAGCTTGCTTGCCCCGGCTTTTATTGCTTCCCACTGTGTCTGCAACTGTTTCCTTTCTCCTGAGTaGCATGGTACTGTAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLAPAFIASHCVCNCFLSPE*HGTVGV Trigger: CACCCCTACAGTACCATGTCACTCAGGAGAAAGGAA...ACAGTTGCAGACACAGTGGGAAGCAATAAAAGCCGGGGCAAGCAAGCTGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR TCA 90 bp | CTGGGTGATACTGAAGACTCGGCAGGATGGCAGGACCTTCAGGAGGTACCTGAGATTCCAGGATCTTTGTaGTGTGTGTACTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGDTEDSAGWQDLQEVPEIPGSL*CVYSPS Trigger: TGAAGGAGAGTACACACATCACAAAGATCCTGGAAT...CTCAGGTACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR TCA 90 bp | GTTTCCATACCAACCAGCCAAGTGCACCTCTGCTTCTTCCATTGCAAATTTGGCCGATGGCCTCCGAACTaGTCACATCATGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSIPTSQVHLCFFHCKFGRWPPN*SHHGRQ Trigger: CTGCCTTCCATGATGTGATCAGTTCGGAGGCCATCG...GCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCGATGCCGCTTCCTTCTaGCTCACTGCTGTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EREREREREKHFQQHKLPDAASF*LTAVCR Trigger: CCTGCAGACAGCAGTGAGGCAGAAGGAAGCGGCATC...GGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCAGCTCAGCTCTGTCTaGTGCTGCTGGGCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: REREREREREKHFQQHKLQLSSV*CCWAAA Trigger: AGCGGCAGCCCAGCAGCAGCAGACAGAGCTGAGCTG...CAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCTCGTCCAGATGGAGTTCACATGAGGCATGCAGAGAAAGGCTTATGCAGTGCTGTCTGCAGGAGTaGAGGACAAGGATGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCSSRWSSHEACRERLMQCCLQE*RTRMLS Trigger: ACTCAGCATCCTTGTCCTTCACTCCTGCAGACAGCA...CTGCATAAGCCTTTCTCTGCATGCCTCATGTGAACTCCATCTGGACGAGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTTTAGGTGCAGTACCTGTGAGATCCTGTTGGCCTTTTTGCACAGCATGCGCTTCCTCAGTTCCTaGTGGGAAAAGACCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VWFRCSTCEILLAFLHSMRFLSS*WEKTTL Trigger: TAAGGTGGTCTTTTCCCAGCAGGAACTGAGGAAGCG...CATGCTGTGCAAAAAGGCCAACAGGATCTCACAGGTACTGCACCTAAACCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCTAGCTCTGTCTGCTGCTaGTGGGCTGCCGCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERNIFSSINCPSSVCC*WAAALF Trigger: AAAGAGAGCGGCAGCCCAGCAGCAGCAGACAGAGCT...AGGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR CCA 90 bp | TTTCGGCTGTTTCCATACCAACCAGCCAAGTGCACCTCTGCTTCTTCCATTGCAGAACTGATCACATCATaGAAGGCAGGCCAGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRLFPYQPAKCTSASSIAELITS*KAGQPE Trigger: TTCAGGCTGGCCTGCCTTCCATGATGTGATCAGTTC...TGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATGGAAACAGCCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | CCAGCCAAGTGCACCTCTGCTTCTTCCATTGCAAATTaGGCCTGCTCTGTGCAATTACAACCGGATCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PAKCTSASSIAN*ACSVQLQPDQC Trigger: ACACTGATCCGGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | CATACCAACCAGCCAAGTGCACCTCTGCTTCTTCCATaGCAAATTTGGCCTGCTCTGTGCAATTACAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTNQPSAPLLLP*QIWPALCNYNR Trigger: CCGGTTGTAATTGCACAGAGCAGGCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCATCACTCTTCGTCACCAAGTaGAGCAGGTTGAAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPTVSATVTRLFSSSLFVTK*SRLKAD Trigger: GTCTGCCTTCAACCTGCTGCACTTGGTGACGAAGAG...TGATGATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCATCATGCCTCACTGCTGTCTaGAGGAGTGAAGGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPTVSATVTRLFSSSCLTAV*RSEGQG Trigger: TCCTTGTCCTTCACTCCTGCAGACAGCAGTGAGGCA...TGATGATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCTGCCTCACTGCTGTCTaGAGGAGTGAAGGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EREREREREKHFQQHKLPCLTAV*RSEGQG Trigger: TCCTTGTCCTTCACTCCTGCAGACAGCAGTGAGGCA...GGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| 3UTR CAA 72 bp | GTACACGAAGATATAGGCACAATGGGGCTAAATGGCTaGTCCCTTGTACACACAGTGAAGTGTGGACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHEDIGTMGLNG*SLVHTVKCGPW Trigger: CCAAGGTCCACACTTCACTGTGTGTACAAGGGACAAGCCATTTAGCCCCATTGTGCCTATATCTTCGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCTGCTGTCTGCAGGAGTaGAGGACAAGGATGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERNIFSSINCCCLQE*RTRMLS Trigger: ACTCAGCATCCTTGTCCTTCACTCCTGCAGACAGCA...GCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCTCACACTGAGAACAGCTaGTTTCCACCCTGTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERNIFSSINCPHTENS*FPPCAS Trigger: GGATGCACAGGGTGGAAACCAGCTGTTCTCAGTGTG...AGGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGTCTGTCTGCTGCTGCTaGGCTGCCGCTCTCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: REREREREREKHFQQHKLSVCCC*AAALFD Trigger: ATCAAAGAGAGCGGCAGCCCAGCAGCAGCAGACAGA...CAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTGCTTCCCACTGTGTCTGCAACTGTCACTCGCCTGTTCTCATCATCATCAGTTCCTTTCTCCTaGGTGACATGGTACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPTVSATVTRLFSSSSVPFS*VTWYCR Trigger: CCTACAGTACCATGTCACTCAGGAGAAAGGAACTGA...TGATGATGAGAACAGGCGAGTGACAGTTGCAGACACAGTGGGAAGCAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCTCTTCGTCACCAAGTaGAGCAGGTTGAAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: REREREREREKHFQQHKLLFVTK*SRLKAD Trigger: GTCTGCCTTCAACCTGCTGCACTTGGTGACGAAGAG...CAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCTTATGAACTGATCACATCATaGAAGGCAGGCCAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERNIFSSINCPYELITS*KAGQPE Trigger: CTCAGGCTGGCCTGCCTTCCATGATGTGATCAGTTC...ATAAGGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130950.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCATACCAACCAGCCAAGTGCACCTCTGCTTCTTCCATTGCAAATTTGGCGTCAAATTTGGTTTCTaGCTTGAACAACGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSIPTSQVHLCFFHCKFGVKFGF*LEQRSS Trigger: GGAACTCCGTTGTTCAAGTCAGAAACCAAATTTGAC...GCCAAATTTGCAATGGAAGAAGCAGAGGTGCACTTGGCTGGTTGGTATGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | AAAACCACAACGCTCACTACTGAGACACCTGCCATATaGCTACAAGATAAAGGTCTGGCTTTCGGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTTTLTTETPAI*LQDKGLAFGCF Trigger: GAAACAGCCGAAAGCCAGACCTTTATCTTGTAGCAATATGGCAGGTGTCTCAGTAGTGAGCGTTGTGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | TTTAGGTGCAGTACCTGTGAGATCCTGTTGGCCTTTTaGCACAGCATGGGATTATTTAGTGCTCAAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRCSTCEILLAF*HSMGLFSAQDF Trigger: GAAGTCTTGAGCACTAAATAATCCCATGCTGTGCAAAAAGGCCAACAGGATCTCACAGGTACTGCACCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | AAAGTCTGGTTTAGGTGCAGTACCTGTGAGATCCTGTaGGCCTTTTTGCACAGCATGGGATTATTTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVWFRCSTCEIL*AFLHSMGLFSA Trigger: AGCACTAAATAATCCCATGCTGTGCAAAAAGGCCAACAGGATCTCACAGGTACTGCACCTAAACCAGACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
||
| 3UTR CAA 72 bp | AGTGAAGAGTTTAAATACTCAGAAATACATTGGATGTaGCTGCTTCCTTCCGATCTGTTCTGTGCACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SEEFKYSEIHWM*LLPSDLFCALI Trigger: TATGAGTGCACAGAACAGATCGGAAGGAAGCAGCAACATCCAATGTATTTCTGAGTATTTAAACTCTTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| CDS TCA 90 bp | CTCGATGGCCTCCGAACTGATCACATCATGGAAGGCAGGCCAGCCTaGGGGGAGCCCGCAGGCTCTCGGGGCCACGGGCTGGCTCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: LDGLRTDHIMEGRPA*GEPAGSRGHGLALR Trigger: ACGAAGAGCCAGCCCGTGGCCCCGAGAGCCTGCGGGCTCCCCTCAGGCTGGCCTGCCTTCCATGATGTGATCAGTTCGGAGGCCATCGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130950.2 |
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| CDS TCA 90 bp | TCCTTCTGCCTCACTGCTGTCTGCAGGAGTGAAGGACAAGGATGCTaGGTTGATGCAGTATCTTTTGCCGGTCGGACGAGGTCCATCGTC | + |
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Preference number: 5 (lower is better) Translates to: SFCLTAVCRSEGQGC*VDAVSFAGRTRSIV Trigger: GACGATGGACCTCGTCCGACCGGCAAAAGATACTGCATCAACTCAGCATCCTTGTCCTTCACTCCTGCAGACAGCAGTGAGGCAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS-3UTR CAA 90 bp | CAGATCACATACACCTCACCACCTCAGCTCACTGAGCTCCATATCCTGCGAAAGTTGATGCAGTATCTTTaGCCGGTCGGACGAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: QITYTSPPQLTELHILRKLMQYL*PVGRGP Trigger: TGGACCTCGTCCGACCGGCAAAAGATACTGCATCAA...CTTTCGCAGGATATGGAGCTCAGTGAGCTGAGGTGGTGAGGTGTATGTGATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| CDS-3UTR CAA 90 bp | CTGGGTGATACTGAAGACTCGGCAGGATGGCAGGACCTTCAGGAGGTACCTGAGGAACCAGAGTCAAATTaGGTTTCTGACTTGAACAAC | + |
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Preference number: 5 (lower is better) Translates to: LGDTEDSAGWQDLQEVPEEPESN*VSDLNN Trigger: GTTGTTCAAGTCAGAAACCAAATTTGACTCTGGTTC...CTCAGGTACCTCCTGAAGGTCCTGCCATCCTGCCGAGTCTTCAGTATCACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCTTTGATGCAGTATCTTTaGCCGGTCGGACGAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RERERERERNIFSSINCPLMQYL*PVGRGP Trigger: TGGACCTCGTCCGACCGGCAAAAGATACTGCATCAA...AGGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGGACAAGGATGCTGAGTaGATGCAGTATCTTTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: REREREREREKHFQQHKLDKDAE*MQYLLP Trigger: CGGCAAAAGATACTGCATCAACTCAGCATCCTTGTC...CAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAAACATTTTCAGCAGCATAAACTGCCCTTATGACAAGGATGCTGAGTaGATGCAGTATCTTTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: ERERERERNIFSSINCPYDKDAE*MQYLLP Trigger: CGGCAAAAGATACTGCATCAACTCAGCATCCTTGTC...ATAAGGGCAGTTTATGCTGCTGAAAATGTTTCTCTCTCTCTCTCTCTCTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS TCA 72 bp | CTCCGAACTGATCACATCATGGAAGGCAGGCCAGCCTaGGGGGAGCCCGCAGGCTCTCGGGGCCACGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRTDHIMEGRPA*GEPAGSRGHGL Trigger: CAGCCCGTGGCCCCGAGAGCCTGCGGGCTCCCCTCAGGCTGGCCTGCCTTCCATGATGTGATCAGTTCGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130950.2 |
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| CDS CCA 72 bp | CCTGAGGGGAGCCCGCAGGCTCTCGGGGCCACGGGCTaGCTCTTCGTCACCAAGTGCAGCAGGTTGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PEGSPQALGATG*LFVTKCSRLKA Trigger: TGCCTTCAACCTGCTGCACTTGGTGACGAAGAGCCAGCCCGTGGCCCCGAGAGCCTGCGGGCTCCCCTCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS TCA 72 bp | CAGCTCTGTCTGCTGCTGCTGGGCTGCCGCTCTCTTTaGTGCCGCTTCCTTCTGCCTCACTGCTGTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QLCLLLLGCRSL*CRFLLPHCCLQ Trigger: CTGCAGACAGCAGTGAGGCAGAAGGAAGCGGCATCAAAGAGAGCGGCAGCCCAGCAGCAGCAGACAGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS CCA 72 bp | TCTGTGAACTCGATGGCCTCCGAACTGATCACATCATaGAAGGCAGGCCAGCCTGAGGGGAGCCCGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVNSMASELITS*KAGQPEGSPQA Trigger: AGCCTGCGGGCTCCCCTCAGGCTGGCCTGCCTTCCATGATGTGATCAGTTCGGAGGCCATCGAGTTCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130950.2 |
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| CDS CAA 72 bp | TCAGCTCTGTCTGCTGCTGCTGGGCTGCCGCTCTCTTaGATGCCGCTTCCTTCTGCCTCACTGCTGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SALSAAAGLPLS*MPLPSASLLSA Trigger: TGCAGACAGCAGTGAGGCAGAAGGAAGCGGCATCAAAGAGAGCGGCAGCCCAGCAGCAGCAGACAGAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS GCA 72 bp | TGCTGGGCTGCCGCTCTCTTTGATGCCGCTTCCTTCTaGCTCACTGCTGTCTGCAGGAGTGAAGGACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CWAAALFDAASF*LTAVCRSEGQG Trigger: TCCTTGTCCTTCACTCCTGCAGACAGCAGTGAGGCAGAAGGAAGCGGCATCAAAGAGAGCGGCAGCCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS CCA 72 bp | TCTGTGAACTCGATGGCCTCCGAACTGATCACATCATaGAAGGCAGGCCAGCCTGAACCAGAGTCAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: SVNSMASELITS*KAGQPEPESNL Trigger: CAAATTTGACTCTGGTTCAGGCTGGCCTGCCTTCCATGATGTGATCAGTTCGGAGGCCATCGAGTTCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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| CDS CAA 72 bp | GTGAAGGACAAGGATGCTGAGTTGATGCAGTATCTTTaGCCGGTCGGACGAGGTCCATCGTCAAAAATGTGC | + |
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Preference number: 6 (lower is better) Translates to: VKDKDAELMQYL*PVGRGPSSKMC Trigger: GCACATTTTTGACGATGGACCTCGTCCGACCGGCAAAAGATACTGCATCAACTCAGCATCCTTGTCCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092143.12 ENSMUST00000130950.2 |
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| CDS CAA 90 bp | CTGATCACATCATGGAAGGCAGGCCAGCCTGAACCAGAGTCAAATTaGGTTTCTGACTTGAACAACGGAGTTCCACAGACAACACATTTA | + |
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Preference number: 6 (lower is better) Translates to: LITSWKAGQPEPESN*VSDLNNGVPQTTHL Trigger: TAAATGTGTTGTCTGTGGAACTCCGTTGTTCAAGTCAGAAACCAAATTTGACTCTGGTTCAGGCTGGCCTGCCTTCCATGATGTGATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092143.12 |
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