Pregenerated sensors for MSRA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054733Ensembl transcript IDs: ENSMUST00000067927.9, ENSMUST00000210363.2, ENSMUST00000210428.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGGTGAGGTATGTCAGCACAGACCAAGGGGTCCCAGTACCCTGTaGTCTCCTGGCCATCCCCCTGCTTCAGAACCCTCAGCATCCTTC | + |
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Preference number: 1 (lower is better) Translates to: VGEVCQHRPRGPSTL*SPGHPPASEPSASF Trigger: GAAGGATGCTGAGGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGTCTGTGCTGACATACCTCACCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR CCA 90 bp | GATCAGAAGGCAGATTACAGTGTATCACCTTGTCATGCTACTCTCTaGAAATCAAACCCCAATAACAACCAGATTCATGTAAAGGTCCGT | + |
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Preference number: 1 (lower is better) Translates to: DQKADYSVSPCHATL*KSNPNNNQIHVKVR Trigger: ACGGACCTTTACATGAATCTGGTTGTTATTGGGGTTTGATTTCCAGAGAGTAGCATGACAAGGTGATACACTGTAATCTGCCTTCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGATCCACTAAAATGTCATaGTTTGTCCCCACCCGGACT | + |
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Preference number: 2 (lower is better) Translates to: QTKGSQYPVLSWPSPCFRSTKMS*FVPTRT Trigger: AGTCCGGGTGGGGACAAATCATGACATTTTAGTGGA...TCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCTGTGAATCACAGCAGTaGCACTCCATCCAGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: TKGSQYPVLSWPSPCFRTCESQQ*HSIQQS Trigger: TGATTGCTGGATGGAGTGGCACTGCTGTGATTCACA...GGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGAAACCCCTAGTACACATCTAGAGCCAGCAGAGCAAAGCGATTTGGCAGGTCCCAGTACCCTGTaGTCTCCTGGCCATCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRETPSTHLEPAEQSDLAGPSTL*SPGHPP Trigger: AGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACC...TGCCAAATCGCTTTGCTCTGCTGGCTCTAGATGTGTACTAGGGGTTTCTCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTACACATCTAGAGCCAGCAGAGCAAAGCGATTTGGCAAATGATTCATGGTACCCTGTGCTCTCCTaGCCATCCCCCTGCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PSTHLEPAEQSDLANDSWYPVLS*PSPCFR Trigger: TCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTA...CCATGAATCATTTGCCAAATCGCTTTGCTCTGCTGGCTCTAGATGTGTACTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR-3UTR TCA 90 bp | AGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGATGGGGGCAGGGAAGTGGGTaGGGTATGTCAGCACAGACC | + |
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Preference number: 2 (lower is better) Translates to: RMLEFIKVTPVFSLQRGWGQGSG*GMSAQT Trigger: GGTCTGTGCTGACATACCTCACCCACTTCCCTGCCC...CCATCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTTCAGAACCCTCAGCATCCTTCCAGTCTGAGCAGATCCAAACAATCCACTGTCATGCTACTCTCTaGAAATCAAACCCCAATAAC | + |
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Preference number: 2 (lower is better) Translates to: PASEPSASFQSEQIQTIHCHATL*KSNPNN Trigger: GTTATTGGGGTTTGATTTCCAGAGAGTAGCATGACA...GTGGATTGTTTGGATCTGCTCAGACTGGAAGGATGCTGAGGGTTCTGAAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAACAATCCACTAAAATGTCATGATTTGTCCCCACCCGGACTGATCAGAAGGTGTCATGCTACTCTCTaGAAATCAAACCCCAATAAC | + |
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Preference number: 2 (lower is better) Translates to: PNNPLKCHDLSPPGLIRRCHATL*KSNPNN Trigger: GTTATTGGGGTTTGATTTCCAGAGAGTAGCATGACA...CCTTCTGATCAGTCCGGGTGGGGACAAATCATGACATTTTAGTGGATTGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGATGTATCACCTTGTCATaGTACTCTCTGGAAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: SRMLEFIKVTPVFSLQRGCITLS*YSLEIK Trigger: TTTGATTTCCAGAGAGTAGCATGACAAGGTGATACA...TCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR CCA 72 bp | GCACAGACCAAGGGGTCCCAGTACCCTGTGCTCTCCTaGCCATCCCCCTGCTTCAGAACCCTCAGCATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AQTKGSQYPVLS*PSPCFRTLSIL Trigger: AAGGATGCTGAGGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGTCTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR GCA 72 bp | GTATGTCAGCACAGACCAAGGGGTCCCAGTACCCTGTaGTCTCCTGGCCATCCCCCTGCTTCAGAACCCTCA | + |
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Preference number: 3 (lower is better) Translates to: VCQHRPRGPSTL*SPGHPPASEPS Trigger: TGAGGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGTCTGTGCTGACATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGGATGGAGGGGGAGAGAAACCCCTAGTACACATCTAGAGCCAGCAGAGCAATGTGGTGTGTGTGCTTaGCATAAAGTGACAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: RGWRGRETPSTHLEPAEQCGVCA*HKVTDV Trigger: CACATCTGTCACTTTATGCAAAGCACACACACCACA...TTGCTCTGCTGGCTCTAGATGTGTACTAGGGGTTTCTCTCCCCCTCCATCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR TCA 72 bp | TCCCCCTGCTTCAGAACCCTCAGCATCCTTCCAGTCTaGGCAGATCCAAACAATCCACTAAAATGTCATGAT | + |
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Preference number: 3 (lower is better) Translates to: SPCFRTLSILPV*ADPNNPLKCHD Trigger: ATCATGACATTTTAGTGGATTGTTTGGATCTGCTCAGACTGGAAGGATGCTGAGGGTTCTGAAGCAGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR TCA 72 bp | AGTCTGAGCAGATCCAAACAATCCACTAAAATGTCATaGTTTGTCCCCACCCGGACTGATCAGAAGGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: SLSRSKQSTKMS*FVPTRTDQKAD Trigger: ATCTGCCTTCTGATCAGTCCGGGTGGGGACAAATCATGACATTTTAGTGGATTGTTTGGATCTGCTCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| 3UTR TCA 72 bp | ACATCTAGAGCCAGCAGAGCAAAGCGATTTGGCAAATaGTTCATGGGATCTGTAGACACTAATGAATTGGGC | + |
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Preference number: 3 (lower is better) Translates to: TSRASRAKRFGK*FMGSVDTNELG Trigger: GCCCAATTCATTAGTGTCTACAGATCCCATGAATCATTTGCCAAATCGCTTTGCTCTGCTGGCTCTAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR CCA 72 bp | GCAGATTACAGTGTATCACCTTGTCATGCTACTCTCTaGAAATCAAACCCCAATAACAACCAGATTCATGTA | + |
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Preference number: 3 (lower is better) Translates to: ADYSVSPCHATL*KSNPNNNQIHV Trigger: TACATGAATCTGGTTGTTATTGGGGTTTGATTTCCAGAGAGTAGCATGACAAGGTGATACACTGTAATCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR GCA 90 bp | CCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCCCTTTGTAGGTGGGATTaGGTGTGTGGCCTCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: PRGPSTLCSPGHPPASEPLCRWD*VCGLLQ Trigger: TTGCAGGAGGCCACACACGCAATCCCACCTACAAAG...GGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCCGCCACAGTAGCCGTCTaGGTTCTTGCTCAGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: PRGPSTLCSPGHPPASEPATVAV*VLAQVL Trigger: CAATACCTGAGCAAGAACCCAGACGGCTACTGTGGC...GGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | GCACAGACCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAAAGCCCACTTGGGTTaGGTACACTCCTTTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQTKGSQYPVLSWPSPCFKAHLG*VHSFQD Trigger: GTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTT...GAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGTCTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | CAGACCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGACATCTGTGTTCCCTCTaGGAAAGGTTCAACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTKGSQYPVLSWPSPCFRHLCSL*ERFNRS Trigger: AGAACGGTTGAACCTTTCCCAGAGGGAACACAGATG...TCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCCTCAGCATCCTTCCAGTCCCTGCAAAGCCCACTTaGGTTGAGTACACTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PVLSWPSPCFRTLSILPVPAKPT*VEYTPF Trigger: GAAAGGAGTGTACTCAACCCAAGTGGGCTTTGCAGG...GACTGGAAGGATGCTGAGGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCCTTTGGTATTCTTCCTTaGATCTCAGGGCTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PRGPSTLCSPGHPPASEPFGILP*ISGLLP Trigger: TGGAAGCAGCCCTGAGATCCAAGGAAGAATACCAAA...GGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | CAGACCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGATTTGGTATTCTTCCTTaGATCTCAGGGCTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QTKGSQYPVLSWPSPCFRFGILP*ISGLLP Trigger: TGGAAGCAGCCCTGAGATCCAAGGAAGAATACCAAA...TCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | AGAGGATGGAGGGGGAGAGAAACCCCTAGTACACATCTAGAGCCAGCAGAGCAAGCCACAGTAGCCGTCTaGGTTCTTGCTCAGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: RGWRGRETPSTHLEPAEQATVAV*VLAQVL Trigger: CAATACCTGAGCAAGAACCCAGACGGCTACTGTGGC...TTGCTCTGCTGGCTCTAGATGTGTACTAGGGGTTTCTCTCCCCCTCCATCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: GPCGVCALHKVTDVNHSSPWVGS*FSQKTL Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | CCTAGTACACATCTAGAGCCAGCAGAGCAAAGCGATTTGGCAAATGATTCATGGGCGCTAGAGAGGAGCTaGAGAGCCCTTCTAGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PSTHLEPAEQSDLANDSWALERS*RALLEA Trigger: CGCCTCTAGAAGGGCTCTCCAGCTCCTCTCTAGCGC...CCATGAATCATTTGCCAAATCGCTTTGCTCTGCTGGCTCTAGATGTGTACTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS-3UTR TCA 90 bp | TGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGCCACTCCATCCAGCGCAGTTCCTCAAAGCTaGTGTGCTCTGGCCGGTACA | + |
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Preference number: 4 (lower is better) Translates to: CALHKVTDVNHSSATPSSAVPQS*CALAGT Trigger: TGTACCGGCCAGAGCACATCAGCTTTGAGGAACTGC...GCTGGATGGAGTGGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | GGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGCCACTCCAGCAGTTCCTCAAAGCTaGTGTGCTCTGGCCGGTACA | + |
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Preference number: 4 (lower is better) Translates to: GVCALHKVTDVNHSSATPAVPQS*CALAGT Trigger: TGTACCGGCCAGAGCACATCAGCTTTGAGGAACTGC...TGGAGTGGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | ACCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCTTTGAAAGAACCTTTTaGTATTCTTCCTTGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: TKGSQYPVLSWPSPCFRTFERTF*YSSLDL Trigger: GAGATCCAAGGAAGAATACCAAAAGGTTCTTTCAAA...GGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| 3UTR CAA 72 bp | ATCACAGCAGTGCCACTCCATCCAGCAATCATGGTGTaGATGGAACCTTCAGGGACAGCTTCGTGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: ITAVPLHPAIMV*MEPSGTASWRE Trigger: TTCTCTCCACGAAGCTGTCCCTGAAGGTTCCATCAACACCATGATTGCTGGATGGAGTGGCACTGCTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGCCACTCCATCCAGCCCGTTCTGTTGCCACTaGCATGGTGTTTGGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CALHKVTDVNHSSATPSSPFCCH*HGVWLC Trigger: GCAAAGCCAAACACCATGTCAGTGGCAACAGAACGG...GCTGGATGGAGTGGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210428.2 |
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| CDS-3UTR GCA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTCTTTGTAGGTGGGATTaGGTGTGTGGCCTCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: GPCGVCALHKVTDVNHSSLCRWD*VCGLLQ Trigger: TTGCAGGAGGCCACACACGCAATCCCACCTACAAAG...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | TCATGTAAAGGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: SCKGPCGVCALHKVTDVNPWVGS*FSQKTL Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...ATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACCTTTACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTCCTGCAAAGCCCACTTaGGTTGAGTACACTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GPCGVCALHKVTDVNHSSPAKPT*VEYTPF Trigger: GAAAGGAGTGTACTCAACCCAAGTGGGCTTTGCAGG...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | CCAAACAATCCACTAAAATGTCATGATTTGTCCCCACCCGGACTGATCAGAAGGGCCACAGTAGCCGTCTaGGTTCTTGCTCAGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: PNNPLKCHDLSPPGLIRRATVAV*VLAQVL Trigger: CAATACCTGAGCAAGAACCCAGACGGCTACTGTGGC...CCTTCTGATCAGTCCGGGTGGGGACAAATCATGACATTTTAGTGGATTGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTAAAGCCCACTTGGGTTaGGTACACTCCTTTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GPCGVCALHKVTDVNHSSKAHLG*VHSFQD Trigger: GTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTT...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | AGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGATGGCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: RMLEFIKVTPVFSLQRGWPWVGS*FSQKTL Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...CCATCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | AATCACAGCAGTGCCACTCCATCCAGCAATCATGGTGTTGATGGAACCTTCAGGTTTGGTATTCTTCCTTaGATCTCAGGGCTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NHSSATPSSNHGVDGTFRFGILP*ISGLLP Trigger: TGGAAGCAGCCCTGAGATCCAAGGAAGAATACCAAA...CCTGAAGGTTCCATCAACACCATGATTGCTGGATGGAGTGGCACTGCTGTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| 3UTR CAA 72 bp | CCAGATTCATGTAAAGGTCCGTGTGGTGTGTGTGCTTaGCATAAAGTGACAGATGTGAATCACAGCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PDSCKGPCGVCA*HKVTDVNHSSA Trigger: GGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACCTTTACATGAATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | CCTGCTTCAGAACCCTCAGCATCCTTCCAGTCTGAGCAGATCCAAACAATCCACGCCAAAGTTATGCTTTaGAAGAACCTTTTGGTATTC | + |
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Preference number: 4 (lower is better) Translates to: PASEPSASFQSEQIQTIHAKVML*KNLLVF Trigger: GAATACCAAAAGGTTCTTTCAAAGCATAACTTTGGC...GTGGATTGTTTGGATCTGCTCAGACTGGAAGGATGCTGAGGGTTCTGAAGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR GCA 90 bp | AGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGATGGCTTTGTAGGTGGGATTaGGTGTGTGGCCTCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RMLEFIKVTPVFSLQRGWLCRWD*VCGLLQ Trigger: TTGCAGGAGGCCACACACGCAATCCCACCTACAAAG...CCATCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR TCA 90 bp | AGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGATGGCCGTTCTGTTGCCACTaGCATGGTGTTTGGCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: RMLEFIKVTPVFSLQRGWPFCCH*HGVWLL Trigger: TAACAGCCAAACACCATGTCAGTGGCAACAGAACGG...CCATCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS-3UTR GCA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTATGGGGCCAAAGTTATaGTTTGAAAGAACCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPCGVCALHKVTDVNHSSMGPKL*FERTFW Trigger: CCAAAAGGTTCTTTCAAAGCATAACTTTGGCCCCAT...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR GCA 90 bp | GGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGCCACTCCAATGGGGCCAAAGTTATaGTTTGAAAGAACCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVCALHKVTDVNHSSATPMGPKL*FERTFW Trigger: CCAAAAGGTTCTTTCAAAGCATAACTTTGGCCCCAT...TGGAGTGGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | AGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGATGGCATCTGTGTTCCCTCTaGGAAAGGTTCAACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RMLEFIKVTPVFSLQRGWHLCSL*ERFNRS Trigger: AGAACGGTTGAACCTTTCCCAGAGGGAACACAGATG...CCATCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACAATCCACTAAAATGTCATGATTTGTCCCCACCCGGACTGATCAGAAGGGCCAAAGTTATGCTTTaGAAGAACCTTTTGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PNNPLKCHDLSPPGLIRRAKVML*KNLLVF Trigger: GAATACCAAAAGGTTCTTTCAAAGCATAACTTTGGC...CCTTCTGATCAGTCCGGGTGGGGACAAATCATGACATTTTAGTGGATTGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CCA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTTTTGAAAGAACCTTTTaGTATTCTTCCTTGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPCGVCALHKVTDVNHSSFERTF*YSSLDL Trigger: GAGATCCAAGGAAGAATACCAAAAGGTTCTTTCAAA...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS TCA 90 bp | CAGGGATCGGCTCGGTGCGTCCCGGCAAGGCTTCCTCTGCGGAGATaGCTTTCGAAGCTGAGTCGCCCATCCTCCGTACCGGGTTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QGSARCVPARLPLRR*LSKLSRPSSVPGWR Trigger: GCGCCAACCCGGTACGGAGGATGGGCGACTCAGCTTCGAAAGTCATCTCCGCAGAGGAAGCCTTGCCGGGACGCACCGAGCCGATCCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS-3UTR CAA 90 bp | ACCAAGGGGTCCCAGTACCCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCGGCATAGTAGAACACTaGTCCCTCTCGGATGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TKGSQYPVLSWPSPCFRTGIVEH*SLSDVG Trigger: ACCGACATCCGAGAGGGACAAGTGTTCTACTATGCC...GGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGGGTACTGGGACCCCTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
||
| CDS TCA 90 bp | CCATCTGTGTTCCCTCTGGGAAAGGTTCAACCGTTCTGTTGCCACTaGCATGGTGTTTGGCTGTTACAGGGATCGGCTCGGTGCGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSVFPLGKVQPFCCH*HGVWLLQGSARCVP Trigger: CGGGACGCACCGAGCCGATCCCTGTAACAGCCAAACACCATGTCAGTGGCAACAGAACGGTTGAACCTTTCCCAGAGGGAACACAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
||
| CDS TCA 90 bp | GTAGGTGGGATTGCGTGTGTGGCCTCCTGCAAAGCCCACTTGGGTTaGGTACACTCCTTTCAAGACCCAGAACTTGCGCTCAGCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGGIACVASCKAHLG*VHSFQDPELALSSP Trigger: TGGGGAGCTGAGCGCAAGTTCTGGGTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTGCAGGAGGCCACACACGCAATCCCACCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CCA 90 bp | TGTGTTCCCTCTGGGAAAGGTTCAACCGTTCTGTTGCCACTGACATaGTGTTTGGCTGTTACAGGGATCGGCTCGGTGCGTCCCGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CVPSGKGSTVLLPLT*CLAVTGIGSVRPGK Trigger: CTTGCCGGGACGCACCGAGCCGATCCCTGTAACAGCCAAACACCATGTCAGTGGCAACAGAACGGTTGAACCTTTCCCAGAGGGAACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS-3UTR CAA 90 bp | CCTGTGCTCTCCTGGCCATCCCCCTGCTTCAGAACCCTCAGCATCCTTCCAGTCGGTTCAACCGTTCTGTaGCCACTGACATGGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLSWPSPCFRTLSILPVGSTVL*PLTWCL Trigger: CAAACACCATGTCAGTGGCAACAGAACGGTTGAACC...GACTGGAAGGATGCTGAGGGTTCTGAAGCAGGGGGATGGCCAGGAGAGCACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS GCA 90 bp | CGGATGTGGGATAGACTGCTGACCGGTACTGTGTACCAAAGTCATTaGCTTGGCGCATGCCTTGGGTCGGGTCGTGATTCTCCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RMWDRLLTGTVYQSH*LGACLGSGRDSPRR Trigger: TCTTCTGGGAGAATCACGACCCGACCCAAGGCATGCGCCAAGGCAATGACTTTGGTACACAGTACCGGTCAGCAGTCTATCCCACATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | TGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGCCACTCCATCCAGCGCCTTGGCGCATGCCTaGGGTCGGGTCGTGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CALHKVTDVNHSSATPSSALAHA*GRVVIL Trigger: GAGAATCACGACCCGACCCAAGGCATGCGCCAAGGC...GCTGGATGGAGTGGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
||
| CDS-3UTR CAA 90 bp | GTGACAGATGTGAATCACAGCAGTGCCACTCCATCCAGCAATCATGGTGTTGATGCCTTGGCGCATGCCTaGGGTCGGGTCGTGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTDVNHSSATPSSNHGVDALAHA*GRVVIL Trigger: GAGAATCACGACCCGACCCAAGGCATGCGCCAAGGC...ATCAACACCATGATTGCTGGATGGAGTGGCACTGCTGTGATTCACATCTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS TCA 90 bp | TGTGTACCAAAGTCATTGCCTTGGCGCATGCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTGAGCAGTTCCTCAAAGCTGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVPKSLPWRMPWVGS*FSQKTLSSSSKLMC Trigger: GCACATCAGCTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGCATGCGCCAAGGCAATGACTTTGGTACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS GCA 90 bp | AGGAAACTCCAGTACCCCCGAGGCCACAGTAGCCGTCTGGGTTCTTaGTCAGGTATTGCTGGTGGTAGTCTTCGGCATAGTAGAACACTT | + |
|
Preference number: 5 (lower is better) Translates to: RKLQYPRGHSSRLGS*SGIAGGSLRHSRTL Trigger: AAGTGTTCTACTATGCCGAAGACTACCACCAGCAATACCTGAGCAAGAACCCAGACGGCTACTGTGGCCTCGGGGGTACTGGAGTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | AGAGGATGGAGGGGGAGAGAAACCCCTAGTACACATCTAGAGCCAGCAGAGCAAGTTCTTGCTCAGGTATaGCTGGTGGTAGTCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGWRGRETPSTHLEPAEQVLAQV*LVVVFG Trigger: GCCGAAGACTACCACCAGCAATACCTGAGCAAGAAC...TTGCTCTGCTGGCTCTAGATGTGTACTAGGGGTTTCTCTCCCCCTCCATCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS GCA 90 bp | CAAAGCCCACTTGGGTTGAGTACACTCCTTTCAAGACCCAGAACTTaGGCTCAGCTCCCCAGAAGCAGCCCATTCCAAATACAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QSPLGLSTLLSRPRT*AQLPRSSPFQIQPS Trigger: AGATGGCTGTATTTGGAATGGGCTGCTTCTGGGGAGCTGAGCGCAAGTTCTGGGTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS CCA 90 bp | TCCCCAGAAGCAGCCCATTCCAAATACAGCCATCTGTGTTCCCTCTaGGAAAGGTTCAACCGTTCTGTTGCCACTGACATGGTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPEAAHSKYSHLCSL*ERFNRSVATDMVFG Trigger: GCCAAACACCATGTCAGTGGCAACAGAACGGTTGAACCTTTCCCAGAGGGAACACAGATGGCTGTATTTGGAATGGGCTGCTTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS CCA 90 bp | ATTCTTCCTTGGATCTCAGGGCTGCTTCCATCTGCACGGCGGATGTaGGATAGACTGCTGACCGGTACTGTGTACCAAAGTCATTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILPWISGLLPSARRM*DRLLTGTVYQSHCL Trigger: AAGGCAATGACTTTGGTACACAGTACCGGTCAGCAGTCTATCCCACATCCGCCGTGCAGATGGAAGCAGCCCTGAGATCCAAGGAAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | CCTGCTTCAGAACCCTCAGCATCCTTCCAGTCTGAGCAGATCCAAACAATCCACGGTTCAACCGTTCTGTaGCCACTGACATGGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PASEPSASFQSEQIQTIHGSTVL*PLTWCL Trigger: CAAACACCATGTCAGTGGCAACAGAACGGTTGAACC...GTGGATTGTTTGGATCTGCTCAGACTGGAAGGATGCTGAGGGTTCTGAAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | TCATGTAAAGGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATGCCTTGGCGCATGCCTaGGGTCGGGTCGTGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCKGPCGVCALHKVTDVNALAHA*GRVVIL Trigger: GAGAATCACGACCCGACCCAAGGCATGCGCCAAGGC...ATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACCTTTACATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGAATCCTCCGTACCGGGTaGGCGCTAGAGAGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRMLEFIKVTPVFSLQRGILRTG*ALERSW Trigger: CCAGCTCCTCTCTAGCGCCAACCCGGTACGGAGGAT...TCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS-3UTR CAA 90 bp | CCTGCTTCAGAACCCTCAGCATCCTTCCAGTCTGAGCAGATCCAAACAATCCACTTTTGGTATTCTTCCTaGGATCTCAGGGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PASEPSASFQSEQIQTIHFWYSS*DLRAAS Trigger: GGAAGCAGCCCTGAGATCCAAGGAAGAATACCAAAA...GTGGATTGTTTGGATCTGCTCAGACTGGAAGGATGCTGAGGGTTCTGAAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGGCATAGTAGAACACTaGTCCCTCTCGGATGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPCGVCALHKVTDVNHSSGIVEH*SLSDVG Trigger: ACCGACATCCGAGAGGGACAAGTGTTCTACTATGCC...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGCCACTCCATCCGTTCTTGCTCAGGTATaGCTGGTGGTAGTCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCALHKVTDVNHSSATPSVLAQV*LVVVFG Trigger: GCCGAAGACTACCACCAGCAATACCTGAGCAAGAAC...GGATGGAGTGGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | CCAAACAATCCACTAAAATGTCATGATTTGTCCCCACCCGGACTGATCAGAAGGGGCATAGTAGAACACTaGTCCCTCTCGGATGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PNNPLKCHDLSPPGLIRRGIVEH*SLSDVG Trigger: ACCGACATCCGAGAGGGACAAGTGTTCTACTATGCC...CCTTCTGATCAGTCCGGGTGGGGACAAATCATGACATTTTAGTGGATTGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTCAAAGCCCACTTGGGTaGAGTACACTCCTTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPCGVCALHKVTDVNHSSQSPLG*STLLSR Trigger: TCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTG...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | GTGACAGATGTGAATCACAGCAGTGCCACTCCATCCAGCAATCATGGTGTTGATCAAAGCCCACTTGGGTaGAGTACACTCCTTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTDVNHSSATPSSNHGVDQSPLG*STLLSR Trigger: TCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTG...ATCAACACCATGATTGCTGGATGGAGTGGCACTGCTGTGATTCACATCTGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS TCA 90 bp | AGTCTTCGGCATAGTAGAACACTTGTCCCTCTCGGATGTCGGTGGTaGTGGGGCCAAAGTTATGCTTTGAAAGAACCTTTTGGTATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLRHSRTLVPLGCRW*WGQSYALKEPFGIL Trigger: AAGAATACCAAAAGGTTCTTTCAAAGCATAACTTTGGCCCCATCACCACCGACATCCGAGAGGGACAAGTGTTCTACTATGCCGAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAATGTTAGAATTCATTAAGGTCACTCCTGTCTTTTCTCTGCAGAGAGGAGTTCTTGCTCAGGTATaGCTGGTGGTAGTCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRMLEFIKVTPVFSLQRGVLAQV*LVVVFG Trigger: GCCGAAGACTACCACCAGCAATACCTGAGCAAGAAC...TCCTCTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | TCATGTAAAGGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATTTTTGGTATTCTTCCTaGGATCTCAGGGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCKGPCGVCALHKVTDVNFWYSS*DLRAAS Trigger: GGAAGCAGCCCTGAGATCCAAGGAAGAATACCAAAA...ATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACCTTTACATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | GTGACAGATGTGAATCACAGCAGTGCCACTCCATCCAGCAATCATGGTGTTGATGGCCAAAGTTATGCTTaGAAAGAACCTTTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VTDVNHSSATPSSNHGVDGQSYA*KEPFGI Trigger: AATACCAAAAGGTTCTTTCAAAGCATAACTTTGGCC...ATCAACACCATGATTGCTGGATGGAGTGGCACTGCTGTGATTCACATCTGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | GGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGCCACTCCAGGCCAAAGTTATGCTTaGAAAGAACCTTTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GVCALHKVTDVNHSSATPGQSYA*KEPFGI Trigger: AATACCAAAAGGTTCTTTCAAAGCATAACTTTGGCC...TGGAGTGGCACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS-3UTR CAA 90 bp | GGTCCGTGTGGTGTGTGTGCTTTGCATAAAGTGACAGATGTGAATCACAGCAGTGGCCAAAGTTATGCTTaGAAAGAACCTTTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GPCGVCALHKVTDVNHSSGQSYA*KEPFGI Trigger: AATACCAAAAGGTTCTTTCAAAGCATAACTTTGGCC...ACTGCTGTGATTCACATCTGTCACTTTATGCAAAGCACACACACCACACGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CCA 72 bp | GAAGACCTTGAGCAGTTCCTCAAAGCTGATGTGCTCTaGCCGGTACACAACCCGGACGACTTCGGCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EDLEQFLKADVL*PVHNPDDFGVA Trigger: GGCCACGCCGAAGTCGTCCGGGTTGTGTACCGGCCAGAGCACATCAGCTTTGAGGAACTGCTCAAGGTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CAA 90 bp | CCCTCTGGGAAAGGTTCAACCGTTCTGTTGCCACTGACATGGTGTTaGGCTGTTACAGGGATCGGCTCGGTGCGTCCCGGCAAGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSGKGSTVLLPLTWC*AVTGIGSVRPGKAS Trigger: GGAAGCCTTGCCGGGACGCACCGAGCCGATCCCTGTAACAGCCAAACACCATGTCAGTGGCAACAGAACGGTTGAACCTTTCCCAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
||
| CDS CAA 90 bp | TGTAGGTGGGATTGCGTGTGTGGCCTCCTGCAAAGCCCACTTGGGTaGAGTACACTCCTTTCAAGACCCAGAACTTGCGCTCAGCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CRWDCVCGLLQSPLG*STLLSRPRTCAQLP Trigger: GGGGAGCTGAGCGCAAGTTCTGGGTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTGCAGGAGGCCACACACGCAATCCCACCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
||
| CDS GCA 72 bp | CAGTACCCCCGAGGCCACAGTAGCCGTCTGGGTTCTTaGTCAGGTATTGCTGGTGGTAGTCTTCGGCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: QYPRGHSSRLGS*SGIAGGSLRHS Trigger: ACTATGCCGAAGACTACCACCAGCAATACCTGAGCAAGAACCCAGACGGCTACTGTGGCCTCGGGGGTACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
||
| CDS CAA 90 bp | AGTACCCCCGAGGCCACAGTAGCCGTCTGGGTTCTTGCTCAGGTATaGCTGGTGGTAGTCTTCGGCATAGTAGAACACTTGTCCCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: STPEATVAVWVLAQV*LVVVFGIVEHLSLS Trigger: CGAGAGGGACAAGTGTTCTACTATGCCGAAGACTACCACCAGCAATACCTGAGCAAGAACCCAGACGGCTACTGTGGCCTCGGGGGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
||
| CDS GCA 72 bp | ACCGGTACTGTGTACCAAAGTCATTGCCTTGGCGCATaGCTTGGGTCGGGTCGTGATTCTCCCAGAAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: TGTVYQSHCLGA*LGSGRDSPRRP Trigger: AGGTCTTCTGGGAGAATCACGACCCGACCCAAGGCATGCGCCAAGGCAATGACTTTGGTACACAGTACCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
||
| CDS TCA 72 bp | ATTGCGTGTGTGGCCTCCTGCAAAGCCCACTTGGGTTaGGTACACTCCTTTCAAGACCCAGAACTTGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IACVASCKAHLG*VHSFQDPELAL Trigger: GAGCGCAAGTTCTGGGTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTGCAGGAGGCCACACACGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
||
| CDS TCA 72 bp | AAGTCATTGCCTTGGCGCATGCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTGAGCAGTTCCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSLPWRMPWVGS*FSQKTLSSSSK Trigger: CTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGCATGCGCCAAGGCAATGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS GCA 72 bp | GATAGACTGCTGACCGGTACTGTGTACCAAAGTCATTaGCTTGGCGCATGCCTTGGGTCGGGTCGTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: DRLLTGTVYQSH*LGACLGSGRDS Trigger: AGAATCACGACCCGACCCAAGGCATGCGCCAAGGCAATGACTTTGGTACACAGTACCGGTCAGCAGTCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CCA 72 bp | TCTGGGAAAGGTTCAACCGTTCTGTTGCCACTGACATaGTGTTTGGCTGTTACAGGGATCGGCTCGGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: SGKGSTVLLPLT*CLAVTGIGSVR Trigger: ACGCACCGAGCCGATCCCTGTAACAGCCAAACACCATGTCAGTGGCAACAGAACGGTTGAACCTTTCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS CAA 72 bp | GATTGCGTGTGTGGCCTCCTGCAAAGCCCACTTGGGTaGAGTACACTCCTTTCAAGACCCAGAACTTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: DCVCGLLQSPLG*STLLSRPRTCA Trigger: AGCGCAAGTTCTGGGTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTGCAGGAGGCCACACACGCAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CAA 72 bp | GTACTGTGTACCAAAGTCATTGCCTTGGCGCATGCCTaGGGTCGGGTCGTGATTCTCCCAGAAGACCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: VLCTKVIALAHA*GRVVILPEDLE Trigger: CTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGCATGCGCCAAGGCAATGACTTTGGTACACAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CAA 90 bp | GCAAAGCCCACTTGGGTTGAGTACACTCCTTTCAAGACCCAGAACTaGCGCTCAGCTCCCCAGAAGCAGCCCATTCCAAATACAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: AKPTWVEYTPFKTQN*RSAPQKQPIPNTAI Trigger: GATGGCTGTATTTGGAATGGGCTGCTTCTGGGGAGCTGAGCGCAAGTTCTGGGTCTTGAAAGGAGTGTACTCAACCCAAGTGGGCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067927.9 ENSMUST00000210428.2 |
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| CDS CAA 72 bp | GTATTGCTGGTGGTAGTCTTCGGCATAGTAGAACACTaGTCCCTCTCGGATGTCGGTGGTGATGGGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VLLVVVFGIVEH*SLSDVGGDGAK Trigger: TTTGGCCCCATCACCACCGACATCCGAGAGGGACAAGTGTTCTACTATGCCGAAGACTACCACCAGCAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CAA 72 bp | GAGGCCACAGTAGCCGTCTGGGTTCTTGCTCAGGTATaGCTGGTGGTAGTCTTCGGCATAGTAGAACACTTG | + |
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Preference number: 6 (lower is better) Translates to: EATVAVWVLAQV*LVVVFGIVEHL Trigger: CAAGTGTTCTACTATGCCGAAGACTACCACCAGCAATACCTGAGCAAGAACCCAGACGGCTACTGTGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CAA 90 bp | AATACAGCCATCTGTGTTCCCTCTGGGAAAGGTTCAACCGTTCTGTaGCCACTGACATGGTGTTTGGCTGTTACAGGGATCGGCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: NTAICVPSGKGSTVL*PLTWCLAVTGIGSV Trigger: CACCGAGCCGATCCCTGTAACAGCCAAACACCATGTCAGTGGCAACAGAACGGTTGAACCTTTCCCAGAGGGAACACAGATGGCTGTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS CAA 90 bp | CTTGCTCAGGTATTGCTGGTGGTAGTCTTCGGCATAGTAGAACACTaGTCCCTCTCGGATGTCGGTGGTGATGGGGCCAAAGTTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: LAQVLLVVVFGIVEH*SLSDVGGDGAKVML Trigger: AAGCATAACTTTGGCCCCATCACCACCGACATCCGAGAGGGACAAGTGTTCTACTATGCCGAAGACTACCACCAGCAATACCTGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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| CDS CAA 72 bp | ATCTGTGTTCCCTCTGGGAAAGGTTCAACCGTTCTGTaGCCACTGACATGGTGTTTGGCTGTTACAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: ICVPSGKGSTVL*PLTWCLAVTGI Trigger: GATCCCTGTAACAGCCAAACACCATGTCAGTGGCAACAGAACGGTTGAACCTTTCCCAGAGGGAACACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067927.9 |
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| CDS TCA 72 bp | CATAGTAGAACACTTGTCCCTCTCGGATGTCGGTGGTaGTGGGGCCAAAGTTATGCTTTGAAAGAACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: HSRTLVPLGCRW*WGQSYALKEPF Trigger: AAAAGGTTCTTTCAAAGCATAACTTTGGCCCCATCACCACCGACATCCGAGAGGGACAAGTGTTCTACTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067927.9 ENSMUST00000210363.2 ENSMUST00000210428.2 |
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