Pregenerated sensors for MSLNL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041062Ensembl transcript IDs: ENSMUST00000047098.7
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATaGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GLCLLLPICPFSWAE*AQILGVRDSLLGWG Trigger: TCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| 3UTR CCA 90 bp | AGAAGATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTaGGCAGAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: RRSGLCLLLPICPFS*AEWAQILGVRDSLL Trigger: TAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCCAGGTCCCCTGGGGCTaGGGACATGTACTTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SPIYLGIGQKIWTLSPPTQVPWG*GHVLQP Trigger: AGGCTGAAGTACATGTCCCCAGCCCCAGGGGACCTG...GGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| 3UTR CCA 72 bp | CTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATaGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: LLLPICPFSWAE*AQILGVRDSLL Trigger: TAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | CTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCCCTGGGAACTGGAGGACTTCCTaGGGTGTGGGAAACCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LGVRDSLLGWGHSSRSPGNWRTS*GVGNPI Trigger: GATGGGGTTTCCCACACCTCAGGAAGTCCTCCAGTT...CCCAGGGGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | CTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCCCTGGGGACAGGTACCCCAGATaGACTGGAGGACTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LGVRDSLLGWGHSSRSPGDRYPR*TGGLPE Trigger: CTCAGGAAGTCCTCCAGTTCATCTGGGGTACCTGTC...CCCAGGGGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCAAGCGTCTGGCATCGTaGCTGCTCAGTTGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QILGVRDSLLGWGHSSRSKRLAS*LLSWPA Trigger: GGCAGGCCAACTGAGCAGGCACGATGCCAGACGCTT...GGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | GCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGCCACAGGATGACATTTaGGTGGTTGCGGGCCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: AQILGVRDSLLGWGHSSRPQDDI*VVAGLP Trigger: CGGAAGGCCCGCAACCACCCAAATGTCATCCTGTGG...CCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCGTGGGTAGGCAGTGTTaGGGGGCCTGTTGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: EWAQILGVRDSLLGWGHSVGRQC*GACWPH Trigger: ATGTGGCCAACAGGCCCCCCAACACTGCCTACCCAC...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCCAGAGCCACAGCGAGTaGCAGGTACCCCAGATGAAC | + |
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Preference number: 4 (lower is better) Translates to: EWAQILGVRDSLLGWGHSQSHSE*QVPQMN Trigger: GTTCATCTGGGGTACCTGTCACTCGCTGTGGCTCTG...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | GCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGAGGATGACATTTGGGTaGTTGCGGGCCTTCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AQILGVRDSLLGWGHSSRRMTFG*LRAFRR Trigger: TCTGCGGAAGGCCCGCAACCACCCAAATGTCATCCT...CCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCCCTGGGAGGTCTGTCATGTTGTaGCTGTGCATCCACAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LGVRDSLLGWGHSSRSPGRSVML*LCIHRM Trigger: CATCCTGTGGATGCACAGCCACAACATGACAGACCT...CCCAGGGGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCGCCTGTGCCAGGTATTaGAGTTCCTCCAAAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EWAQILGVRDSLLGWGHSACARY*SSSKGA Trigger: TGCCCCTTTGGAGGAACTTCAATACCTGGCACAGGC...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | CAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCTGTCCCGAAGGTAACTaGCACAGTAGCAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: QILGVRDSLLGWGHSSRSCPEGN*HSSSHR Trigger: TCTGTGGCTGCTACTGTGTCAGTTACCTTCGGGACA...GGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCCAGCACACTGGGGTCTaGAGTCACAATTTGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QILGVRDSLLGWGHSSRSQHTGV*SHNLCC Trigger: GCAGCACAAATTGTGACTGCAGACCCCAGTGTGCTG...GGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGGAAGAGGTCATCGTaGAGGGTGGCTGCTGTGATG | + |
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Preference number: 4 (lower is better) Translates to: EWAQILGVRDSLLGWGHSRKRSS*RVAAVM Trigger: CATCACAGCAGCCACCCTGCACGATGACCTCTTCCT...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | CTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTCTGTTCTCGGGGCAGCTaGCTGGCTGGCAAGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LDSVSSYQFVLLVGQNGLCSRGS*LAGKHQ Trigger: CTGGTGCTTGCCAGCCAGCCAGCTGCCCCGAGAACA...GAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | AGTCCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCGCTTTGACAACGCGCTaGCACTCTGCAGGCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SPIYLGIGQKIWTLSPPTALTTR*HSAGSG Trigger: CCCGCTGCCTGCAGAGTGCCAGCGCGTTGTCAAAGC...GGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | GATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGAGACCAGCGAGGGGATaGGGTGCAGCTGGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DLDSVSSYQFVLLVGQNGRPARG*GAAGPQ Trigger: CTGAGGACCAGCTGCACCTCATCCCCTCGCTGGTCT...CCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCTGTGTTGGCTTCACTTaGATTCAGTCCTCCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: EWAQILGVRDSLLGWGHSCVGFT*IQSSLG Trigger: CCCAAGGGAGGACTGAATGCAAGTGAAGCCAACACA...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCAGTCACAATTTGTGCTaGCTCCATGTCACACACCAG | + |
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Preference number: 4 (lower is better) Translates to: QILGVRDSLLGWGHSSRSSHNLC*LHVTHQ Trigger: CTGGTGTGTGACATGGAGGCAGCACAAATTGTGACT...GGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATAGGGCCTGTAGCCCCTaGAGGTTCCAGGAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PIYLGIGQKIWTLSPPTNRACSP*RFQEPG Trigger: TCCTGGCTCCTGGAACCTGCAGGGGCTACAGGCCCT...ATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTCCCCTGGGAGAAAAGTAGAAGGTTaGGTGGGTGGAATTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LGVRDSLLGWGHSSRSPGRKVEG*VGGIRS Trigger: ACTTCGAATTCCACCCACCCAACCTTCTACTTTTCT...CCCAGGGGACCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCACGTGTCAATGTCCATaGAGATGTTGGCCTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EWAQILGVRDSLLGWGHSTCQCP*RCWPVP Trigger: TGGCACAGGCCAACATCTCCATGGACATTGACACGT...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATAGCGAGGGGATGAGGTaGAGCTGGTCCTCAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: PIYLGIGQKIWTLSPPTNSEGMR*SWSSGM Trigger: CATCCCTGAGGACCAGCTGCACCTCATCCCCTCGCT...ATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | GATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGGCAGCCACAGAAGGCTaGAAGGCAGAGCCACAGCGA | + |
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Preference number: 4 (lower is better) Translates to: DLDSVSSYQFVLLVGQNGAATEG*KAEPQR Trigger: TCGCTGTGGCTCTGCCTTCCAGCCTTCTGTGGCTGC...CCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATTTGGCGAGACCAGGACTTaGCAGGGCACCCACTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HLSWNRPEDLDSVSSYQFGETRT*QGTHSG Trigger: TCCAGAGTGGGTGCCCTGGCAAGTCCTGGTCTCGCC...AAATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCCTCAGGGATGCCATGTaGGTAAATCTGAGTAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: EWAQILGVRDSLLGWGHSLRDAM*VNLSKL Trigger: AAGCTTACTCAGATTTACCCACATGGCATCCCTGAG...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | AGATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGCCTTGGGCAGCATGGTaGATGAAGGCCCGGCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: RSGLCLLLPICPFSWAEWPWAAW*MKARQL Trigger: TAACTGCCGGGCCTTCATTCACCATGCTGCCCAAGG...CCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | AGTCCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCCTGTGTCCCCGGATGTaGTGTTCCACTGGCCTATTT | + |
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Preference number: 4 (lower is better) Translates to: SPIYLGIGQKIWTLSPPTLCPRM*CSTGLF Trigger: AAATAGGCCAGTGGAACATCACATCCGGGGACACAG...GGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | TCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTAAGCAGCCACCACACTaGGGAAGAAGTCCAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SGLCLLLPICPFSWAEWAKQPPH*GRSPSP Trigger: TGGGCTTGGACTTCTTCCGCAGTGTGGTGGCTGCTT...AGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | AGTCCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCGGACTTCCTGAGGTGTaGGAAACCCCATCATTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SPIYLGIGQKIWTLSPPTGLPEV*ETPSLP Trigger: AGGCAATGATGGGGTTTCCCACACCTCAGGAAGTCC...GGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | CTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTCGTGTCCTGTGAGCAGTaGCCATTTGTCCCGAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LDSVSSYQFVLLVGQNGLVSCEQ*PFVPKV Trigger: TACCTTCGGGACAAATGGCCACTGCTCACAGGACAC...GAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATTTGCCAAGCAGCTGAGCTaGCAGGCTTTGAGTGCAACC | + |
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Preference number: 4 (lower is better) Translates to: HLSWNRPEDLDSVSSYQFAKQLS*QALSAT Trigger: GGTTGCACTCAAAGCCTGGCAGCTCAGCTGCTTGGC...AAATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | AGATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGCACTGTCCACTCCCATaGTCTTCAGTGTCAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RSGLCLLLPICPFSWAEWHCPLP*SSVSGG Trigger: ACCCCCTGACACTGAAGAGCATGGGAGTGGACAGTG...CCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | GATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGAATTCGAAGTCATCCTaGAGACCCAGCTGTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: DLDSVSSYQFVLLVGQNGNSKSS*RPSCAA Trigger: CGCTGCACAGCTGGGTCTCCAGGATGACTTCGAATT...CCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | CTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTCAGGAGTGGATCAAACTaGATGGTGGGTAGGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LDSVSSYQFVLLVGQNGLRSGSN*MVGRQC Trigger: ACACTGCCTACCCACCATCCAGTTTGATCCACTCCT...GAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | CTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTCTTGAGGACACTGAAGTaGCCTTGGACTCTAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LDSVSSYQFVLLVGQNGLLRTLK*PWTLGS Trigger: ACTTCCTAGAGTCCAAGGCCACTTCAGTGTCCTCAA...GAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | AGATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGTGGATCAAACTGGATaGTGGGTAGGCAGTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RSGLCLLLPICPFSWAEWVDQTG*WVGSVG Trigger: CCCAACACTGCCTACCCACCATCCAGTTTGATCCAC...CCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | TCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTAAGCACCAGAAGTTTTaGAGGAGGGAGGTGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SGLCLLLPICPFSWAEWAKHQKF*RREVLF Trigger: GAACAACACCTCCCTCCTGCAAAACTTCTGGTGCTT...AGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATTGCAGTCACAATTTGTaGTGCCTCCATGTCACACAC | + |
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Preference number: 4 (lower is better) Translates to: PIYLGIGQKIWTLSPPTNCSHNL*CLHVTH Trigger: GTGTGTGACATGGAGGCAGCACAAATTGTGACTGCA...ATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR GCA 90 bp | CATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATTTAGGATTCCAGCTGGGTaGAGTCATAGTGCACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HLSWNRPEDLDSVSSYQFRIPAG*SHSAPG Trigger: TCCTGGTGCACTATGACTGCACCCAGCTGGAATCCT...AAATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | TCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTTGTCCATGGAGATGTTaGCCTGTGCCAGGTATTGAA | + |
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Preference number: 4 (lower is better) Translates to: SGLCLLLPICPFSWAEWACPWRC*PVPGIE Trigger: TTCAATACCTGGCACAGGCCAACATCTCCATGGACA...AGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR TCA 90 bp | AGATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGTGAAGCCAGGCTTCTaGTTAAACTGGAGAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RSGLCLLLPICPFSWAEWVKPGF*LNWRAV Trigger: AACAGCTCTCCAGTTTAATCAGAAGCCTGGCTTCAC...CCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CCA 90 bp | CATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATTTAGAAGGTTGGGTGGGTaGAATTCGAAGTCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HLSWNRPEDLDSVSSYQFRRLGG*NSKSSW Trigger: CCAGGATGACTTCGAATTCCACCCACCCAACCTTCT...AAATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | AGCTTGGCTTTGACAACGCGCTGGCACTCTGCAGGCAGCGGGTGTTaGAGCAAGGGGTCCAGGTTGGCCCTGAGCACGCGTGTGCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: SLALTTRWHSAGSGC*SKGSRLALSTRVPR Trigger: CCTAGGCACACGCGTGCTCAGGGCCAACCTGGACCCCTTGCTCCAACACCCGCTGCCTGCAGAGTGCCAGCGCGTTGTCAAAGCCAAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 90 bp | AGTCCAAGCCCACAGCCTCCTGCACCTTCTCCCACAGGTGGGGGCTaGTGTAAGTGGCCAGAAGTCCGAGGGCCTGTAGCCCCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPSPQPPAPSPTGGG*CKWPEVRGPVAPAG Trigger: ACCTGCAGGGGCTACAGGCCCTCGGACTTCTGGCCACTTACATCAGCCCCCACCTGTGGGAGAAGGTGCAGGAGGCTGTGGGCTTGGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 90 bp | ACTCTGCAGGCAGCGGGTGTTGGAGCAAGGGGTCCAGGTTGGCCCTaGGCACGCGTGTGCCTAGGCAGGATTCCAGCTGGGTGCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLQAAGVGARGPGWP*ARVCLGRIPAGCSH Trigger: ATGACTGCACCCAGCTGGAATCCTGCCTAGGCACACGCGTGCTCAGGGCCAACCTGGACCCCTTGCTCCAACACCCGCTGCCTGCAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | GGTCCGCCCAGACAGGCCAAGGCTGTGCGCTGCAGGGCAACTCTCTaGTTGGGCAAGTTGGTGAGCAGTTCTGTGTCCCCTTGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPPRQAKAVRCRATL*LGKLVSSSVSPWAA Trigger: TGCTGCCCAAGGGGACACAGAACTGCTCACCAACTTGCCCAACCAGAGAGTTGCCCTGCAGCGCACAGCCTTGGCCTGTCTGGGCGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS-3UTR CAA 90 bp | GCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGGGGCGAGACCAGGACTaGCCAGGGCACCCACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQILGVRDSLLGWGHSSRGRDQD*PGHPLW Trigger: CCAGAGTGGGTGCCCTGGCAAGTCCTGGTCTCGCCC...CCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 90 bp | CCATGTCACACACCAGGACCCCAAGAAGCCACAGGTCTGAAGCACTaGGCTGTAGGTGGGGTCCGCCCAGACAGGCCAAGGCTGTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCHTPGPQEATGLKH*AVGGVRPDRPRLCA Trigger: AGCGCACAGCCTTGGCCTGTCTGGGCGGACCCCACCTACAGCTCAGTGCTTCAGACCTGTGGCTTCTTGGGGTCCTGGTGTGTGACATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS-3UTR CAA 90 bp | GCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGGCCAGGAGGCCCGATTaGCGTCTTCCCACTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQILGVRDSLLGWGHSSRARRPD*RLPTGQ Trigger: CTGGCCAGTGGGAAGACGCAAATCGGGCCTCCTGGC...CCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 90 bp | TTGGCTTCACTTGCATTCAGTCCTCCCTTGGGCAAGCCTTTAGCCTaGGGACCCGAGCAGTGGGCGGTGAGGGACAGGAGGAGGGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LASLAFSPPLGKPLA*GPEQWAVRDRRRAR Trigger: TCTCGCCCTCCTCCTGTCCCTCACCGCCCACTGCTCGGGTCCTCAGGCTAAAGGCTTGCCCAAGGGAGGACTGAATGCAAGTGAAGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 90 bp | AGTCATAGTGCACCAGGAAGAGGTCATCGTGCAGGGTGGCTGCTGTaGTGTTGCCACGGACACAGGATCTCCCTGTGCGCCGCTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHSAPGRGHRAGWLL*CCHGHRISLCAAWA Trigger: GGCCCAAGCGGCGCACAGGGAGATCCTGTGTCCGTGGCAACATCACAGCAGCCACCCTGCACGATGACCTCTTCCTGGTGCACTATGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 90 bp | CTGGGGGCAGGGAGAGATGTCTGGAGCTCCGGCCAGCCGGAACTCTaGGGGCTGGATAAACTGAAGCTGCTTGAGGCTCATCCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGAGRDVWSSGQPEL*GLDKLKLLEAHPAE Trigger: CTCTGCTGGATGAGCCTCAAGCAGCTTCAGTTTATCCAGCCCTCAGAGTTCCGGCTGGCCGGAGCTCCAGACATCTCTCCCTGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 90 bp | GAAGTTGTCAACGAAGCGTCTGGCATCGTGCCTGCTCAGTTGGCCTaGCCGGCAAGCAGCCACCACACTGCGGAAGAAGTCCAAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EVVNEASGIVPAQLA*PASSHHTAEEVQAH Trigger: GTGGGCTTGGACTTCTTCCGCAGTGTGGTGGCTGCTTGCCGGGCAGGCCAACTGAGCAGGCACGATGCCAGACGCTTCGTTGACAACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 90 bp | GGCCAGCAGGGTGTTAAGGGCCGCAGTCTGCATGACAGTAAGCCTTaGGCAGCGAAGCAGGTTCCTCAGCACACTGGGGTCTGCAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQQGVKGRSLHDSKP*AAKQVPQHTGVCSH Trigger: GTGACTGCAGACCCCAGTGTGCTGAGGAACCTGCTTCGCTGCCCAAGGCTTACTGTCATGCAGACTGCGGCCCTTAACACCCTGCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS-3UTR CAA 90 bp | GCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCAGCAGGTGCGCCGCTTGGGCCTaGAGGACACTGAAGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQILGVRDSLLGWGHSSRCAAWA*RTLKWP Trigger: AGGCCACTTCAGTGTCCTCAAGGCCCAAGCGGCGCA...CCTGCTGCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 90 bp | GGTGCAGTCATAGTGCACCAGGAAGAGGTCATCGTGCAGGGTGGCTaGTGTGATGTTGCCACGGACACAGGATCTCCCTGTGCGCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GAVIVHQEEVIVQGG*CDVATDTGSPCAPL Trigger: AAGCGGCGCACAGGGAGATCCTGTGTCCGTGGCAACATCACAGCAGCCACCCTGCACGATGACCTCTTCCTGGTGCACTATGACTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 90 bp | TCCAGCAGAGACGGGAACCCCCGATGGCCACCAGAAGAGCTCCAGTaGCCTTGCCATTGTGGTCCAAGAACCTCTGTAGAACTGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSRDGNPRWPPEELQ*PCHCGPRTSVELPP Trigger: CGGAGGCAGTTCTACAGAGGTTCTTGGACCACAATGGCAAGGTCACTGGAGCTCTTCTGGTGGCCATCGGGGGTTCCCGTCTCTGCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 90 bp | TCCTGGAGACCCAGCTGTGCAGCGAGGTTGGCCAAGCAGCTGAGCTaGCAGGCTTTGAGTGCAACCCTCTGTGAAGCCAGGCTTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SWRPSCAARLAKQLS*QALSATLCEARLLI Trigger: AATCAGAAGCCTGGCTTCACAGAGGGTTGCACTCAAAGCCTGGCAGCTCAGCTGCTTGGCCAACCTCGCTGCACAGCTGGGTCTCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS GCA 90 bp | AAGGTTGGGTGGGTGGAATTCGAAGTCATCCTGGAGACCCAGCTGTaGAGCGAGGTTGGCCAAGCAGCTGAGCTGCCAGGCTTTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KVGWVEFEVILETQL*SEVGQAAELPGFEC Trigger: GCACTCAAAGCCTGGCAGCTCAGCTGCTTGGCCAACCTCGCTGCACAGCTGGGTCTCCAGGATGACTTCGAATTCCACCCACCCAACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | TCTAGGAAGTTGTCAACGAAGCGTCTGGCATCGTGCCTGCTCAGTTaGCCTGCCCGGCAAGCAGCCACCACACTGCGGAAGAAGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRKLSTKRLASCLLS*PARQAATTLRKKSK Trigger: CTTGGACTTCTTCCGCAGTGTGGTGGCTGCTTGCCGGGCAGGCCAACTGAGCAGGCACGATGCCAGACGCTTCGTTGACAACTTCCTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 90 bp | ATCTCCCTGTGCGCCGCTTGGGCCTTGAGGACACTGAAGTGGCCTTaGACTCTAGGAAGTTGTCAACGAAGCGTCTGGCATCGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISLCAAWALRTLKWP*TLGSCQRSVWHRAC Trigger: GCAGGCACGATGCCAGACGCTTCGTTGACAACTTCCTAGAGTCCAAGGCCACTTCAGTGTCCTCAAGGCCCAAGCGGCGCACAGGGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 90 bp | GCGGATCCAAGGAGTGGATCAAACTGGATGGTGGGTAGGCAGTGTTaGGGGGCCTGTTGGCCACATAGGCCTGTGTGGGGCTGGTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: ADPRSGSNWMVGRQC*GACWPHRPVWGWCI Trigger: TATACACCAGCCCCACACAGGCCTATGTGGCCAACAGGCCCCCCAACACTGCCTACCCACCATCCAGTTTGATCCACTCCTTGGATCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS GCA 90 bp | AGTAAGCCTTGGGCAGCGAAGCAGGTTCCTCAGCACACTGGGGTCTaGAGTCACAATTTGTGCTGCCTCCATGTCACACACCAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKPWAAKQVPQHTGV*SHNLCCLHVTHQDP Trigger: GGGGTCCTGGTGTGTGACATGGAGGCAGCACAAATTGTGACTGCAGACCCCAGTGTGCTGAGGAACCTGCTTCGCTGCCCAAGGCTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 90 bp | GAGCCGCATCTGAGGCCAGCAGGATCATCACTGTGTCCCCGGATGTaGTGTTCCACTGGCCTATTTCAGCGAGGGAGTAGAGGTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: EPHLRPAGSSLCPRM*CSTGLFQRGSRGRP Trigger: TGGTCTACCTCTACTCCCTCGCTGAAATAGGCCAGTGGAACATCACATCCGGGGACACAGTGATGATCCTGCTGGCCTCAGATGCGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | GAAGCCAGGCTTCTGATTAAACTGGAGAGCTGTTCTCGGGGCAGCTaGCTGGCTGGCAAGCACCAGAAGTTTTGCAGGAGGGAGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EARLLIKLESCSRGS*LAGKHQKFCRREVL Trigger: CAACACCTCCCTCCTGCAAAACTTCTGGTGCTTGCCAGCCAGCCAGCTGCCCCGAGAACAGCTCTCCAGTTTAATCAGAAGCCTGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | GAACCCCCGATGGCCACCAGAAGAGCTCCAGTGACCTTGCCATTGTaGTCCAAGAACCTCTGTAGAACTGCCTCCGTCTGGTTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EPPMATRRAPVTLPL*SKNLCRTASVWLSR Trigger: TCTGGACAACCAGACGGAGGCAGTTCTACAGAGGTTCTTGGACCACAATGGCAAGGTCACTGGAGCTCTTCTGGTGGCCATCGGGGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | ATGACATTTGGGTGGTTGCGGGCCTTCCGCAGATCTCCCAGGTTCTaGCCCAGCAGATTCCTCACACTGTCCACTCCCATGCTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MTFGWLRAFRRSPRF*PSRFLTLSTPMLFS Trigger: ACTGAAGAGCATGGGAGTGGACAGTGTGAGGAATCTGCTGGGCCAGAACCTGGGAGATCTGCGGAAGGCCCGCAACCACCCAAATGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CAA 90 bp | GAATGGGCTCAGATCCTGGGAGTCAGAGACAGCCTCCTAGGATGGGGACATAGCCTCTGGTTGGGCAAGTaGGTGAGCAGTTCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EWAQILGVRDSLLGWGHSLWLGK*VSSSVS Trigger: GGACACAGAACTGCTCACCAACTTGCCCAACCAGAG...GCTATGTCCCCATCCTAGGAGGCTGTCTCTGACTCCCAGGATCTGAGCCCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS GCA 90 bp | TTGCAGGAGGGAGGTGTTGTTCCTGACCCATGTGTTGGCTTCACTTaGATTCAGTCCTCCCTTGGGCAAGCCTTTAGCCTGAGGACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LQEGGVVPDPCVGFT*IQSSLGQAFSLRTR Trigger: TCGGGTCCTCAGGCTAAAGGCTTGCCCAAGGGAGGACTGAATGCAAGTGAAGCCAACACATGGGTCAGGAACAACACCTCCCTCCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | ACCTTGCCATTGTGGTCCAAGAACCTCTGTAGAACTGCCTCCGTCTaGTTGTCCAGAGCCGCATCTGAGGCCAGCAGGATCATCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLPLWSKNLCRTASV*LSRAASEASRIITV Trigger: CACAGTGATGATCCTGCTGGCCTCAGATGCGGCTCTGGACAACCAGACGGAGGCAGTTCTACAGAGGTTCTTGGACCACAATGGCAAGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 90 bp | GTGGGGCTGGTGTATAGGCCCATATCAGACAGGTCTGTCATGTTGTaGCTGTGCATCCACAGGATGACATTTGGGTGGTTGCGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGLVYRPISDRSVML*LCIHRMTFGWLRAF Trigger: GAAGGCCCGCAACCACCCAAATGTCATCCTGTGGATGCACAGCCACAACATGACAGACCTGTCTGATATGGGCCTATACACCAGCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 90 bp | CCATATCAGACAGGTCTGTCATGTTGTGGCTGTGCATCCACAGGATaGCATTTGGGTGGTTGCGGGCCTTCCGCAGATCTCCCAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PYQTGLSCCGCASTG*HLGGCGPSADLPGS Trigger: AGAACCTGGGAGATCTGCGGAAGGCCCGCAACCACCCAAATGTCATCCTGTGGATGCACAGCCACAACATGACAGACCTGTCTGATATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS GCA 90 bp | GTTGAGGTTGGTGAACGTGTCAATGTCCATGGAGATGTTGGCCTGTaGCAGGTATTGAAGTTCCTCCAAAGGGGCACCACCGAGGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VEVGERVNVHGDVGL*QVLKFLQRGTTEVG Trigger: CCCTACCTCGGTGGTGCCCCTTTGGAGGAACTTCAATACCTGGCACAGGCCAACATCTCCATGGACATTGACACGTTCACCAACCTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CAA 90 bp | AGATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGAGCTGTGCAGCGAGGTaGGCCAAGCAGCTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSGLCLLLPICPFSWAEWSCAAR*AKQLSC Trigger: GCAGCTCAGCTGCTTGGCCAACCTCGCTGCACAGCT...CCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CAA 90 bp | AGATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGCCTGGGCCAGTGCCATaGGCCCTAGTGTCCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSGLCLLLPICPFSWAEWPGPVP*ALVSCE Trigger: CTCACAGGACACTAGGGCCAATGGCACTGGCCCAGG...CCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CAA 90 bp | CTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTCTGCAGGAGGGAGGTGTaGTTCCTGACCCATGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDSVSSYQFVLLVGQNGLCRREV*FLTHVL Trigger: CAACACATGGGTCAGGAACAACACCTCCCTCCTGCA...GAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CAA 90 bp | CTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTCCAAGCACCAGAAGTTTaGCAGGAGGGAGGTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LDSVSSYQFVLLVGQNGLQAPEV*QEGGVV Trigger: AACAACACCTCCCTCCTGCAAAACTTCTGGTGCTTG...GAGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CAA 90 bp | TCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTAGAGCTCCAGTGACCTaGCCATTGTGGTCCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGLCLLLPICPFSWAEWARAPVT*PLWSKN Trigger: GTTCTTGGACCACAATGGCAAGGTCACTGGAGCTCT...AGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS-3UTR CAA 90 bp | GATCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGTTCAGTGTCAGGGGGTaGAGGTTGGTGAACGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLDSVSSYQFVLLVGQNGFSVRG*RLVNVS Trigger: TGACACGTTCACCAACCTCAACCCCCTGACACTGAA...CCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS-3UTR CAA 90 bp | AGTCCCATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCTTCCTGACCCATGTGTaGGCTTCACTTGCATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPIYLGIGQKIWTLSPPTFLTHV*ASLAFS Trigger: ACTGAATGCAAGTGAAGCCAACACATGGGTCAGGAA...GGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS-3UTR CAA 90 bp | TCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTGTCTGCAGTCACAATTaGTGCTGCCTCCATGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGLCLLLPICPFSWAEWAVCSHN*CCLHVT Trigger: TGTGACATGGAGGCAGCACAAATTGTGACTGCAGAC...AGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS-3UTR CAA 90 bp | TCTGGACTCTGTCTCCTCCTACCAATTTGTCCTTTTAGTTGGGCAGAATGGGCTGACACTGAAGTGGCCTaGGACTCTAGGAAGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLCLLLPICPFSWAEWADTEVA*DSRKLS Trigger: TGACAACTTCCTAGAGTCCAAGGCCACTTCAGTGTC...AGCCCATTCTGCCCAACTAAAAGGACAAATTGGTAGGAGGAGACAGAGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS-3UTR CAA 90 bp | CATCTATCTTGGAATAGGCCAGAAGATCTGGACTCTGTCTCCTCCTACCAATTTCAGTTCTGTGTCCCCTaGGGCAGCATGGTGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLSWNRPEDLDSVSSYQFQFCVP*GSMVNE Trigger: TTCATTCACCATGCTGCCCAAGGGGACACAGAACTG...AAATTGGTAGGAGGAGACAGAGTCCAGATCTTCTGGCCTATTCCAAGATAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | CGCTGGCACTCTGCAGGCAGCGGGTGTTGGAGCAAGGGGTCCAGGTaGGCCCTGAGCACGCGTGTGCCTAGGCAGGATTCCAGCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RWHSAGSGCWSKGSR*ALSTRVPRQDSSWV Trigger: CACCCAGCTGGAATCCTGCCTAGGCACACGCGTGCTCAGGGCCAACCTGGACCCCTTGCTCCAACACCCGCTGCCTGCAGAGTGCCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | GCAGCGGGTGTTGGAGCAAGGGGTCCAGGTTGGCCCTaGGCACGCGTGTGCCTAGGCAGGATTCCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGVGARGPGWP*ARVCLGRIPAG Trigger: CCCAGCTGGAATCCTGCCTAGGCACACGCGTGCTCAGGGCCAACCTGGACCCCTTGCTCCAACACCCGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | GCTGTAGGTGGGGTCCGCCCAGACAGGCCAAGGCTGTaGGCTGCAGGGCAACTCTCTGGTTGGGCAAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVGGVRPDRPRL*AAGQLSGWASW Trigger: CCAACTTGCCCAACCAGAGAGTTGCCCTGCAGCGCACAGCCTTGGCCTGTCTGGGCGGACCCCACCTACAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 72 bp | TTGACAACGCGCTGGCACTCTGCAGGCAGCGGGTGTTaGAGCAAGGGGTCCAGGTTGGCCCTGAGCACGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LTTRWHSAGSGC*SKGSRLALSTR Trigger: ACGCGTGCTCAGGGCCAACCTGGACCCCTTGCTCCAACACCCGCTGCCTGCAGAGTGCCAGCGCGTTGTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | TCTGCAGGCAGCGGGTGTTGGAGCAAGGGGTCCAGGTaGGCCCTGAGCACGCGTGTGCCTAGGCAGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAGSGCWSKGSR*ALSTRVPRQDS Trigger: GGAATCCTGCCTAGGCACACGCGTGCTCAGGGCCAACCTGGACCCCTTGCTCCAACACCCGCTGCCTGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | TTTGACAACGCGCTGGCACTCTGCAGGCAGCGGGTGTaGGAGCAAGGGGTCCAGGTTGGCCCTGAGCACGCG | + |
|
Preference number: 6 (lower is better) Translates to: FDNALALCRQRV*EQGVQVGPEHA Trigger: CGCGTGCTCAGGGCCAACCTGGACCCCTTGCTCCAACACCCGCTGCCTGCAGAGTGCCAGCGCGTTGTCAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | CCACAGCCTCCTGCACCTTCTCCCACAGGTGGGGGCTaGTGTAAGTGGCCAGAAGTCCGAGGGCCTGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQPPAPSPTGGG*CKWPEVRGPVA Trigger: GGCTACAGGCCCTCGGACTTCTGGCCACTTACATCAGCCCCCACCTGTGGGAGAAGGTGCAGGAGGCTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 72 bp | CCAAGAAGCCACAGGTCTGAAGCACTGAGCTGTAGGTaGGGTCCGCCCAGACAGGCCAAGGCTGTGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRSHRSEALSCR*GPPRQAKAVRC Trigger: GCAGCGCACAGCCTTGGCCTGTCTGGGCGGACCCCACCTACAGCTCAGTGCTTCAGACCTGTGGCTTCTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | CCGCCCAGACAGGCCAAGGCTGTGCGCTGCAGGGCAACTCTCTGGTaGGGCAAGTTGGTGAGCAGTTCTGTGTCCCCTTGGGCAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PPRQAKAVRCRATLW*GKLVSSSVSPWAAW Trigger: CCATGCTGCCCAAGGGGACACAGAACTGCTCACCAACTTGCCCAACCAGAGAGTTGCCCTGCAGCGCACAGCCTTGGCCTGTCTGGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | CTTGCATTCAGTCCTCCCTTGGGCAAGCCTTTAGCCTaGGGACCCGAGCAGTGGGCGGTGAGGGACAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAFSPPLGKPLA*GPEQWAVRDRR Trigger: CCTCCTGTCCCTCACCGCCCACTGCTCGGGTCCTCAGGCTAAAGGCTTGCCCAAGGGAGGACTGAATGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | ACACCAGGACCCCAAGAAGCCACAGGTCTGAAGCACTaGGCTGTAGGTGGGGTCCGCCCAGACAGGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPGPQEATGLKH*AVGGVRPDRPR Trigger: CCTTGGCCTGTCTGGGCGGACCCCACCTACAGCTCAGTGCTTCAGACCTGTGGCTTCTTGGGGTCCTGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | GCACCAGGAAGAGGTCATCGTGCAGGGTGGCTGCTGTaGTGTTGCCACGGACACAGGATCTCCCTGTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: APGRGHRAGWLL*CCHGHRISLCA Trigger: GGCGCACAGGGAGATCCTGTGTCCGTGGCAACATCACAGCAGCCACCCTGCACGATGACCTCTTCCTGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | CCCAGCTGTGCAGCGAGGTTGGCCAAGCAGCTGAGCTaGCAGGCTTTGAGTGCAACCCTCTGTGAAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSCAARLAKQLS*QALSATLCEAR Trigger: CCTGGCTTCACAGAGGGTTGCACTCAAAGCCTGGCAGCTCAGCTGCTTGGCCAACCTCGCTGCACAGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | GTTGTCAACGAAGCGTCTGGCATCGTGCCTGCTCAGTaGGCCTGCCCGGCAAGCAGCCACCACACTGCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVNEASGIVPAQ*ACPASSHHTAE Trigger: TTCCGCAGTGTGGTGGCTGCTTGCCGGGCAGGCCAACTGAGCAGGCACGATGCCAGACGCTTCGTTGACAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | TGGGTGGAATTCGAAGTCATCCTGGAGACCCAGCTGTaGAGCGAGGTTGGCCAAGCAGCTGAGCTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WVEFEVILETQL*SEVGQAAELPG Trigger: GCCTGGCAGCTCAGCTGCTTGGCCAACCTCGCTGCACAGCTGGGTCTCCAGGATGACTTCGAATTCCACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | CTAGGAAGTTGTCAACGAAGCGTCTGGCATCGTGCCTaGTCAGTTGGCCTGCCCGGCAAGCAGCCACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LGSCQRSVWHRA*SVGLPGKQPPH Trigger: GTGTGGTGGCTGCTTGCCGGGCAGGCCAACTGAGCAGGCACGATGCCAGACGCTTCGTTGACAACTTCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | GACTCTAGGAAGTTGTCAACGAAGCGTCTGGCATCGTaGCTGCTCAGTTGGCCTGCCCGGCAAGCAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: DSRKLSTKRLAS*LLSWPARQAAT Trigger: GGTGGCTGCTTGCCGGGCAGGCCAACTGAGCAGGCACGATGCCAGACGCTTCGTTGACAACTTCCTAGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | GCTGTGCGCTGCAGGGCAACTCTCTGGTTGGGCAAGTaGGTGAGCAGTTCTGTGTCCCCTTGGGCAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: AVRCRATLWLGK*VSSSVSPWAAW Trigger: CCATGCTGCCCAAGGGGACACAGAACTGCTCACCAACTTGCCCAACCAGAGAGTTGCCCTGCAGCGCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | AGGAAGAGGTCATCGTGCAGGGTGGCTGCTGTGATGTaGCCACGGACACAGGATCTCCCTGTGCGCCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKRSSCRVAAVM*PRTQDLPVRRL Trigger: CAAGCGGCGCACAGGGAGATCCTGTGTCCGTGGCAACATCACAGCAGCCACCCTGCACGATGACCTCTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | CTGAGTAAGCTTGGCTTTGACAACGCGCTGGCACTCTaGAGGCAGCGGGTGTTGGAGCAAGGGGTCCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSKLGFDNALAL*RQRVLEQGVQV Trigger: AACCTGGACCCCTTGCTCCAACACCCGCTGCCTGCAGAGTGCCAGCGCGTTGTCAAAGCCAAGCTTACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 72 bp | TGTTGCCACGGACACAGGATCTCCCTGTGCGCCGCTTaGGCCTTGAGGACACTGAAGTGGCCTTGGACTCTA | + |
|
Preference number: 6 (lower is better) Translates to: CCHGHRISLCAA*ALRTLKWPWTL Trigger: TAGAGTCCAAGGCCACTTCAGTGTCCTCAAGGCCCAAGCGGCGCACAGGGAGATCCTGTGTCCGTGGCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | CACGGACACAGGATCTCCCTGTGCGCCGCTTGGGCCTaGAGGACACTGAAGTGGCCTTGGACTCTAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HGHRISLCAAWA*RTLKWPWTLGS Trigger: ACTTCCTAGAGTCCAAGGCCACTTCAGTGTCCTCAAGGCCCAAGCGGCGCACAGGGAGATCCTGTGTCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | ATGTTGCCACGGACACAGGATCTCCCTGTGCGCCGCTaGGGCCTTGAGGACACTGAAGTGGCCTTGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: MLPRTQDLPVRR*GLEDTEVALDS Trigger: AGAGTCCAAGGCCACTTCAGTGTCCTCAAGGCCCAAGCGGCGCACAGGGAGATCCTGTGTCCGTGGCAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | TTGTGGCTGTGCATCCACAGGATGACATTTGGGTGGTaGCGGGCCTTCCGCAGATCTCCCAGGTTCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LWLCIHRMTFGW*RAFRRSPRFWP Trigger: GGGCCAGAACCTGGGAGATCTGCGGAAGGCCCGCAACCACCCAAATGTCATCCTGTGGATGCACAGCCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | GATGTTCAGGGGTCCAACTGCCCTGGGCCAGTGCCATaGGCCCTAGTGTCCTGTGAGCAGTGGCCATTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DVQGSNCPGPVP*ALVSCEQWPFV Trigger: GACAAATGGCCACTGCTCACAGGACACTAGGGCCAATGGCACTGGCCCAGGGCAGTTGGACCCCTGAACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | GGGTGGAATTCGAAGTCATCCTGGAGACCCAGCTGTGCAGCGAGGTaGGCCAAGCAGCTGAGCTGCCAGGCTTTGAGTGCAACCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GWNSKSSWRPSCAAR*AKQLSCQALSATLC Trigger: ACAGAGGGTTGCACTCAAAGCCTGGCAGCTCAGCTGCTTGGCCAACCTCGCTGCACAGCTGGGTCTCCAGGATGACTTCGAATTCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | GGCAACTCTCTGGTTGGGCAAGTTGGTGAGCAGTTCTGTGTCCCCTaGGGCAGCATGGTGAATGAAGGCCCGGCAGTTAGTGTCCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GNSLVGQVGEQFCVP*GSMVNEGPAVSVPH Trigger: GTGGGGGACACTAACTGCCGGGCCTTCATTCACCATGCTGCCCAAGGGGACACAGAACTGCTCACCAACTTGCCCAACCAGAGAGTTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | CGCTTGGGCCTTGAGGACACTGAAGTGGCCTTGGACTCTAGGAAGTaGTCAACGAAGCGTCTGGCATCGTGCCTGCTCAGTTGGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLGLEDTEVALDSRK*STKRLASCLLSWPA Trigger: GGCAGGCCAACTGAGCAGGCACGATGCCAGACGCTTCGTTGACAACTTCCTAGAGTCCAAGGCCACTTCAGTGTCCTCAAGGCCCAAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | GATCTCCCTGTGCGCCGCTTGGGCCTTGAGGACACTGAAGTGGCCTaGGACTCTAGGAAGTTGTCAACGAAGCGTCTGGCATCGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLPVRRLGLEDTEVA*DSRKLSTKRLASCL Trigger: CAGGCACGATGCCAGACGCTTCGTTGACAACTTCCTAGAGTCCAAGGCCACTTCAGTGTCCTCAAGGCCCAAGCGGCGCACAGGGAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | CAGAGACGGGAACCCCCGATGGCCACCAGAAGAGCTCCAGTGACCTaGCCATTGTGGTCCAAGAACCTCTGTAGAACTGCCTCCGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QRREPPMATRRAPVT*PLWSKNLCRTASVW Trigger: CCAGACGGAGGCAGTTCTACAGAGGTTCTTGGACCACAATGGCAAGGTCACTGGAGCTCTTCTGGTGGCCATCGGGGGTTCCCGTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | GAGCTGTTCTCGGGGCAGCTGGCTGGCTGGCAAGCACCAGAAGTTTaGCAGGAGGGAGGTGTTGTTCCTGACCCATGTGTTGGCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ELFSGQLAGWQAPEV*QEGGVVPDPCVGFT Trigger: AGTGAAGCCAACACATGGGTCAGGAACAACACCTCCCTCCTGCAAAACTTCTGGTGCTTGCCAGCCAGCCAGCTGCCCCGAGAACAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | CCCAGCTGTGCAGCGAGGTTGGCCAAGCAGCTGAGCTGCCAGGCTTaGAGTGCAACCCTCTGTGAAGCCAGGCTTCTGATTAAACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSCAARLAKQLSCQA*SATLCEARLLIKLE Trigger: CTCCAGTTTAATCAGAAGCCTGGCTTCACAGAGGGTTGCACTCAAAGCCTGGCAGCTCAGCTGCTTGGCCAACCTCGCTGCACAGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | CTGGAATCTGATGTTCAGGGGTCCAACTGCCCTGGGCCAGTGCCATaGGCCCTAGTGTCCTGTGAGCAGTGGCCATTTGTCCCGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LESDVQGSNCPGPVP*ALVSCEQWPFVPKV Trigger: TACCTTCGGGACAAATGGCCACTGCTCACAGGACACTAGGGCCAATGGCACTGGCCCAGGGCAGTTGGACCCCTGAACATCAGATTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | GGGAGAGATGTCTGGAGCTCCGGCCAGCCGGAACTCTaGGGGCTGGATAAACTGAAGCTGCTTGAGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GRDVWSSGQPEL*GLDKLKLLEAH Trigger: ATGAGCCTCAAGCAGCTTCAGTTTATCCAGCCCTCAGAGTTCCGGCTGGCCGGAGCTCCAGACATCTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CAA 72 bp | GCAGCGAGGTTGGCCAAGCAGCTGAGCTGCCAGGCTTaGAGTGCAACCCTCTGTGAAGCCAGGCTTCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: AARLAKQLSCQA*SATLCEARLLI Trigger: AATCAGAAGCCTGGCTTCACAGAGGGTTGCACTCAAAGCCTGGCAGCTCAGCTGCTTGGCCAACCTCGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CAA 72 bp | GTGCGCCGCTTGGGCCTTGAGGACACTGAAGTGGCCTaGGACTCTAGGAAGTTGTCAACGAAGCGTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VRRLGLEDTEVA*DSRKLSTKRLA Trigger: TGCCAGACGCTTCGTTGACAACTTCCTAGAGTCCAAGGCCACTTCAGTGTCCTCAAGGCCCAAGCGGCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | GACGGGAACCCCCGATGGCCACCAGAAGAGCTCCAGTaGCCTTGCCATTGTGGTCCAAGAACCTCTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DGNPRWPPEELQ*PCHCGPRTSVE Trigger: TTCTACAGAGGTTCTTGGACCACAATGGCAAGGTCACTGGAGCTCTTCTGGTGGCCATCGGGGGTTCCCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | TGGGCAGCGAAGCAGGTTCCTCAGCACACTGGGGTCTaGAGTCACAATTTGTGCTGCCTCCATGTCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: WAAKQVPQHTGV*SHNLCCLHVTH Trigger: GTGTGTGACATGGAGGCAGCACAAATTGTGACTGCAGACCCCAGTGTGCTGAGGAACCTGCTTCGCTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | ATAGTGCACCAGGAAGAGGTCATCGTGCAGGGTGGCTaGTGTGATGTTGCCACGGACACAGGATCTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IVHQEEVIVQGG*CDVATDTGSPC Trigger: ACAGGGAGATCCTGTGTCCGTGGCAACATCACAGCAGCCACCCTGCACGATGACCTCTTCCTGGTGCACTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | TCCGTTTCTCTGGAATCTGATGTTCAGGGGTCCAACTaGCCTGGGCCAGTGCCATTGGCCCTAGTGTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SVSLESDVQGSN*PGPVPLALVSC Trigger: ACAGGACACTAGGGCCAATGGCACTGGCCCAGGGCAGTTGGACCCCTGAACATCAGATTCCAGAGAAACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 72 bp | AGTAGAAGGTTGGGTGGGTGGAATTCGAAGTCATCCTaGAGACCCAGCTGTGCAGCGAGGTTGGCCAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRRLGGWNSKSS*RPSCAARLAKQ Trigger: CTGCTTGGCCAACCTCGCTGCACAGCTGGGTCTCCAGGATGACTTCGAATTCCACCCACCCAACCTTCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 72 bp | TTGTGGTCCAAGAACCTCTGTAGAACTGCCTCCGTCTaGTTGTCCAGAGCCGCATCTGAGGCCAGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LWSKNLCRTASV*LSRAASEASRI Trigger: GATCCTGCTGGCCTCAGATGCGGCTCTGGACAACCAGACGGAGGCAGTTCTACAGAGGTTCTTGGACCACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | TGGTCCAAGAACCTCTGTAGAACTGCCTCCGTCTGGTaGTCCAGAGCCGCATCTGAGGCCAGCAGGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: WSKNLCRTASVW*SRAASEASRII Trigger: GATGATCCTGCTGGCCTCAGATGCGGCTCTGGACAACCAGACGGAGGCAGTTCTACAGAGGTTCTTGGACCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | CCGATGGCCACCAGAAGAGCTCCAGTGACCTTGCCATaGTGGTCCAAGAACCTCTGTAGAACTGCCTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PMATRRAPVTLP*WSKNLCRTASV Trigger: GACGGAGGCAGTTCTACAGAGGTTCTTGGACCACAATGGCAAGGTCACTGGAGCTCTTCTGGTGGCCATCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | GAACCCCCGATGGCCACCAGAAGAGCTCCAGTGACCTaGCCATTGTGGTCCAAGAACCTCTGTAGAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPPMATRRAPVT*PLWSKNLCRTA Trigger: GGCAGTTCTACAGAGGTTCTTGGACCACAATGGCAAGGTCACTGGAGCTCTTCTGGTGGCCATCGGGGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | AGCTGGCTGGCTGGCAAGCACCAGAAGTTTTGCAGGAGGGAGGTGTaGTTCCTGACCCATGTGTTGGCTTCACTTGCATTCAGTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SWLAGKHQKFCRREV*FLTHVLASLAFSPP Trigger: GGGAGGACTGAATGCAAGTGAAGCCAACACATGGGTCAGGAACAACACCTCCCTCCTGCAAAACTTCTGGTGCTTGCCAGCCAGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | TTGCCATTGTGGTCCAAGAACCTCTGTAGAACTGCCTCCGTCTGGTaGTCCAGAGCCGCATCTGAGGCCAGCAGGATCATCACTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPLWSKNLCRTASVW*SRAASEASRIITVS Trigger: GGACACAGTGATGATCCTGCTGGCCTCAGATGCGGCTCTGGACAACCAGACGGAGGCAGTTCTACAGAGGTTCTTGGACCACAATGGCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | CTCACACTGTCCACTCCCATGCTCTTCAGTGTCAGGGGGTTGAGGTaGGTGAACGTGTCAATGTCCATGGAGATGTTGGCCTGTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTLSTPMLFSVRGLR*VNVSMSMEMLACAR Trigger: CCTGGCACAGGCCAACATCTCCATGGACATTGACACGTTCACCAACCTCAACCCCCTGACACTGAAGAGCATGGGAGTGGACAGTGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 90 bp | TGTGTGGGGCTGGTGTATAGGCCCATATCAGACAGGTCTGTCATGTaGTGGCTGTGCATCCACAGGATGACATTTGGGTGGTTGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CVGLVYRPISDRSVM*WLCIHRMTFGWLRA Trigger: GGCCCGCAACCACCCAAATGTCATCCTGTGGATGCACAGCCACAACATGACAGACCTGTCTGATATGGGCCTATACACCAGCCCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS TCA 72 bp | CTGAGGCCAGCAGGATCATCACTGTGTCCCCGGATGTaGTGTTCCACTGGCCTATTTCAGCGAGGGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRPAGSSLCPRM*CSTGLFQRGSR Trigger: TCTACTCCCTCGCTGAAATAGGCCAGTGGAACATCACATCCGGGGACACAGTGATGATCCTGCTGGCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | AGGCCCATATCAGACAGGTCTGTCATGTTGTGGCTGTaGATCCACAGGATGACATTTGGGTGGTTGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPISDRSVMLWL*IHRMTFGWLRA Trigger: GGCCCGCAACCACCCAAATGTCATCCTGTGGATGCACAGCCACAACATGACAGACCTGTCTGATATGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | CTGGAGGACTTCCTGAGGTGTGGGAAACCCCATCATTaGCTGGCGGATCCAAGGAGTGGATCAAACTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LEDFLRCGKPHH*LADPRSGSNWM Trigger: CATCCAGTTTGATCCACTCCTTGGATCCGCCAGGCAATGATGGGGTTTCCCACACCTCAGGAAGTCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 72 bp | GGGGATGAGGTGCAGCTGGTCCTCAGGGATGCCATGTaGGTAAATCTGAGTAAGCTTGGCTTTGACAACGCG | + |
|
Preference number: 6 (lower is better) Translates to: GDEVQLVLRDAM*VNLSKLGFDNA Trigger: CGCGTTGTCAAAGCCAAGCTTACTCAGATTTACCCACATGGCATCCCTGAGGACCAGCTGCACCTCATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | GTCAATGTCCATGGAGATGTTGGCCTGTGCCAGGTATaGAAGTTCCTCCAAAGGGGCACCACCGAGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VNVHGDVGLCQV*KFLQRGTTEVG Trigger: CCCTACCTCGGTGGTGCCCCTTTGGAGGAACTTCAATACCTGGCACAGGCCAACATCTCCATGGACATTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS GCA 72 bp | GGTGAACGTGTCAATGTCCATGGAGATGTTGGCCTGTaGCAGGTATTGAAGTTCCTCCAAAGGGGCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: GERVNVHGDVGL*QVLKFLQRGTT Trigger: GGTGGTGCCCCTTTGGAGGAACTTCAATACCTGGCACAGGCCAACATCTCCATGGACATTGACACGTTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CCA 72 bp | CCCCCACCTGGCTCAGATCGTAGAAAAGTAGAAGGTTaGGTGGGTGGAATTCGAAGTCATCCTGGAGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPPGSDRRKVEG*VGGIRSHPGDP Trigger: TGGGTCTCCAGGATGACTTCGAATTCCACCCACCCAACCTTCTACTTTTCTACGATCTGAGCCAGGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
||
| CDS CAA 72 bp | CTTGAGGACACTGAAGTGGCCTTGGACTCTAGGAAGTaGTCAACGAAGCGTCTGGCATCGTGCCTGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LEDTEVALDSRK*STKRLASCLLS Trigger: ACTGAGCAGGCACGATGCCAGACGCTTCGTTGACAACTTCCTAGAGTCCAAGGCCACTTCAGTGTCCTCAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CAA 72 bp | ACTGGAGGACTTCCTGAGGTGTGGGAAACCCCATCATaGCCTGGCGGATCCAAGGAGTGGATCAAACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: TGGLPEVWETPS*PGGSKEWIKLD Trigger: ATCCAGTTTGATCCACTCCTTGGATCCGCCAGGCAATGATGGGGTTTCCCACACCTCAGGAAGTCCTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CAA 90 bp | CACCAGAAGTTTTGCAGGAGGGAGGTGTTGTTCCTGACCCATGTGTaGGCTTCACTTGCATTCAGTCCTCCCTTGGGCAAGCCTTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: HQKFCRREVLFLTHV*ASLAFSPPLGKPLA Trigger: GGCTAAAGGCTTGCCCAAGGGAGGACTGAATGCAAGTGAAGCCAACACATGGGTCAGGAACAACACCTCCCTCCTGCAAAACTTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CAA 72 bp | GCTGGCAAGCACCAGAAGTTTTGCAGGAGGGAGGTGTaGTTCCTGACCCATGTGTTGGCTTCACTTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: AGKHQKFCRREV*FLTHVLASLAF Trigger: GAATGCAAGTGAAGCCAACACATGGGTCAGGAACAACACCTCCCTCCTGCAAAACTTCTGGTGCTTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CAA 90 bp | AGATTCCTCACACTGTCCACTCCCATGCTCTTCAGTGTCAGGGGGTaGAGGTTGGTGAACGTGTCAATGTCCATGGAGATGTTGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RFLTLSTPMLFSVRG*RLVNVSMSMEMLAC Trigger: ACAGGCCAACATCTCCATGGACATTGACACGTTCACCAACCTCAACCCCCTGACACTGAAGAGCATGGGAGTGGACAGTGTGAGGAATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 72 bp | AGCACCAGAAGTTTTGCAGGAGGGAGGTGTTGTTCCTaGCCCATGTGTTGGCTTCACTTGCATTCAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: STRSFAGGRCCS*PMCWLHLHSVL Trigger: GAGGACTGAATGCAAGTGAAGCCAACACATGGGTCAGGAACAACACCTCCCTCCTGCAAAACTTCTGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CAA 72 bp | CTGGTGTATAGGCCCATATCAGACAGGTCTGTCATGTaGTGGCTGTGCATCCACAGGATGACATTTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LVYRPISDRSVM*WLCIHRMTFGW Trigger: CCACCCAAATGTCATCCTGTGGATGCACAGCCACAACATGACAGACCTGTCTGATATGGGCCTATACACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS CCA 72 bp | GTGTATAGGCCCATATCAGACAGGTCTGTCATGTTGTaGCTGTGCATCCACAGGATGACATTTGGGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VYRPISDRSVML*LCIHRMTFGWL Trigger: CAACCACCCAAATGTCATCCTGTGGATGCACAGCCACAACATGACAGACCTGTCTGATATGGGCCTATACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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| CDS TCA 72 bp | TATTCTCCCACATTACTGGTGTTCCTAAAGACCTCATaGGCCTTGACAAAGAGCGCATCCTTCCGACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: YSPTLLVFLKTS*ALTKSASFRLW Trigger: CCAGAGTCGGAAGGATGCGCTCTTTGTCAAGGCTCATGAGGTCTTTAGGAACACCAGTAATGTGGGAGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047098.7 |
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