Pregenerated sensors for MSLN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063011Ensembl transcript IDs: ENSMUST00000075884.8, ENSMUST00000236137.2, ENSMUST00000237359.2, ENSMUST00000238120.2, ENSMUST00000238188.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATaGCCCCTGGTACCCACTCCTGGTCAAGAGGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: CLLSSRVLKLWQ*PLVPTPGQEGP Trigger: GGGGCCCTCTTGACCAGGAGTGGGTACCAGGGGTCATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGACTGGGGACAGGGCTaGCAAAGTCAGCGGCACCGT | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWDWGQG*QSQRHR Trigger: ACGGTGCCGCTGACTTTGCCAGCCCTGTCCCCAGTC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTCCTGGCCCAAGGAGTaGGGCTCTGCTGGAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGSWPKE*GSAGEG Trigger: GCCTTCTCCAGCAGAGCCTCACTCCTTGGGCCAGGA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCCATGCTCACATTGTaGTGGCTGAGGGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWSMLTL*WLRARR Trigger: CCTGCGGGCCCTCAGCCAGCACAATGTGAGCATGGA...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGACTGGGGACAGGGCTaGCAAAGTCAGCGGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGDWGQG*QSQRHR Trigger: ACGGTGCCGCTGACTTTGCCAGCCCTGTCCCCAGTC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGGCCTGTGGGGAGACTaGGGACAGGGCTGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGGLWGD*GQGWQS Trigger: ACTTTGCCAGCCCTGTCCCCAGTCTCCCCACAGGCC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCTGGAGGGTACCGAGTaGAGATCCTGGGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGLEGTE*RSWGLK Trigger: CTTCAGCCCCCAGGATCTGCACTCGGTACCCTCCAG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTCCATGCTCACATTGTaGTGGCTGAGGGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGSMLTL*WLRARR Trigger: CCTGCGGGCCCTCAGCCAGCACAATGTGAGCATGGA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCAAGGAGTGAGGCTCTaGTGGAGAAGGCCTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWQGVRL*WRRPLG Trigger: TCCGAGAGGCCTTCTCCAGCAGAGCCTCACTCCTTG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGCCTTTTCCTGGCTCTaGTCCAGGGGTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWAFSWL*SRGPWH Trigger: ATGCCAAGGACCCCTGGACCAGAGCCAGGAAAAGGC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGCAGGGCATCCAGGGTaGAGACTGACCACTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWAGHPG*RLTTSM Trigger: CATCGAAGTGGTCAGTCTCCACCCTGGATGCCCTGC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGTAGGGCTCCTTCCCTaGAGGGCAGGCTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWVGLLP*RAGFLF Trigger: GAACAGAAAGCCTGCCCTCCAGGGAAGGAGCCCTAC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGGACCAGGTAGCCATTaGGGATGCCACCCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWGPGSH*GCHPEV Trigger: GACTTCAGGGTGGCATCCCCAATGGCTACCTGGTCC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGGAGTGAGGCTCTGCTaGAGAAGGCCTCTCGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWGVRLC*RRPLGH Trigger: ATGTCCGAGAGGCCTTCTCCAGCAGAGCCTCACTCC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGAAACATGGCTGGGTTaGGGAAGAGCAGCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWETWLG*GRAAGP Trigger: TGGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCCTCAGAACCTCCCTaGCTGCCTTTTCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWSSEPP*LPFPGS Trigger: AGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTGAGGA...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGTAGGAAGCTTCGGCTaGAGATGGGACTTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWVGSFG*RWDFHR Trigger: CCTGTGGAAGTCCCATCTGCAGCCGAAGCTTCCTAC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTGGGCACAAGCCTGTTaGCCTGGAAACATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGWAQAC*PGNMAG Trigger: CCCAGCCATGTTTCCAGGGCAACAGGCTTGTGCCCA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCAGAACCTCCCTGACTaGCTTTTCCTGGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWQNLPD*LFLALV Trigger: GACCAGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCCAGATGCCTCTGGCTaGACTTGTCCAGGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGPDASG*TCPGLG Trigger: CCCAAGACCTGGACAAGTGCAGCCAGAGGCATCTGG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCAAGGAGTGAGGCTCTaGTGGAGAAGGCCTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGQGVRL*WRRPLG Trigger: TCCGAGAGGCCTTCTCCAGCAGAGCCTCACTCCTTG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCAGCATGGAGGAGTGTaGCCTCCTGGCTTGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWQHGGV*PPGLSL Trigger: CAAAGACAAGCCAGGAGGCCACACTCCTCCATGCTG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCCCTGGAAACATGGCTaGGTTGAGGAAGAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWPWKHG*VEEEQQ Trigger: CTGCTGCTCTTCCTCAACCCAGCCATGTTTCCAGGG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGCCTTTTCCTGGCTCTaGTCCAGGGGTCCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGAFSWL*SRGPWH Trigger: ATGCCAAGGACCCCTGGACCAGAGCCAGGAAAAGGC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGCAGGGCATCCAGGGTaGAGACTGACCACTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGAGHPG*RLTTSM Trigger: CATCGAAGTGGTCAGTCTCCACCCTGGATGCCCTGC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGCCTGGAGGGGTCTCTaGAGATGTGTTGCAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWAWRGL*RCVAAI Trigger: AATGGCTGCAACACATCTCCAGAGACCCCTCCAGGC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGTAGGGCTCCTTCCCTaGAGGGCAGGCTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGVGLLP*RAGFLF Trigger: GAACAGAAAGCCTGCCCTCCAGGGAAGGAGCCCTAC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGATACCTCCTCACATGTaGGGCCAAGAAAGAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWIPPHM*GQERGL Trigger: CAGGCCTCTTTCTTGGCCTCACATGTGAGGAGGTAT...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGAAACATGGCTGGGTTaGGGAAGAGCAGCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGETWLG*GRAAGP Trigger: TGGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTCCTCAGAACCTCCCTaGCTGCCTTTTCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGSSEPP*LPFPGS Trigger: AGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTGAGGA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGTAGGAAGCTTCGGCTaGAGATGGGACTTCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGVGSFG*RWDFHR Trigger: CCTGTGGAAGTCCCATCTGCAGCCGAAGCTTCCTAC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCAGAACCTCCCTGACTaGCTTTTCCTGGCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGQNLPD*LFLALV Trigger: GACCAGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGAGGAGTGTGGCCTCCTaGCTTGTCTTTGTAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWRSVAS*LVFVVW Trigger: CCAGACTACAAAGACAAGCCAGGAGGCCACACTCCT...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGACAAGCCTGTTGCCCTaGAAACATGGCTGGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWTSLLP*KHGWVE Trigger: CTCAACCCAGCCATGTTTCCAGGGCAACAGGCTTGT...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGCCTGGAGGGGTCTCTaGAGATGTGTTGCAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGAWRGL*RCVAAI Trigger: AATGGCTGCAACACATCTCCAGAGACCCCTCCAGGC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGCAGCCATTCAGCTTTaGCATCCTTGGGGATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGAAIQL*HPWGCS Trigger: AGAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGCAGATCCTGGGGGCTaGAGTCACATAGATAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWADPGG*SHIDSL Trigger: TAAGCTATCTATGTGACTTCAGCCCCCAGGATCTGC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTTGTAGTCTGGGTCTaGAGACGTGGTATCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWFVVWV*RRGIHP Trigger: TGGGTGGATACCACGTCTGCAGACCCAGACTACAAA...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCCTTGGCTTGTTCCATaGTCAGGTCAGATACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWPWLVP*SGQIPP Trigger: AGGAGGTATCTGACCTGAGCATGGAACAAGCCAAGG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTACCAGGGAATCCACCTaGAGCCTCTTGAAAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGTREST*SLLKVA Trigger: AGCCACTTTCAAGAGGCTGCAGGTGGATTCCCTGGT...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTAGGAGTGTGGCCTCCTaGCTTGTCTTTGTAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGRSVAS*LVFVVW Trigger: CCAGACTACAAAGACAAGCCAGGAGGCCACACTCCT...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTACAAGCCTGTTGCCCTaGAAACATGGCTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGTSLLP*KHGWVE Trigger: CTCAACCCAGCCATGTTTCCAGGGCAACAGGCTTGT...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGAGGTCACATTCCACTaGTGGATGTCTTCAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWEVTFH*WMSSGL Trigger: TAGCCCTGAAGACATCCACCAGTGGAATGTGACCTC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTACCGAGTGCAGATCCTaGGGGCTGAAGTCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGTECRS*GLKSHR Trigger: TCTATGTGACTTCAGCCCCCAGGATCTGCACTCGGT...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGCAGATCCTGGGGGCTaGAGTCACATAGATAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGADPGG*SHIDSL Trigger: TAAGCTATCTATGTGACTTCAGCCCCCAGGATCTGC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTTTGTAGTCTGGGTCTaGAGACGTGGTATCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGFVVWV*RRGIHP Trigger: TGGGTGGATACCACGTCTGCAGACCCAGACTACAAA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCCTTGGCTTGTTCCATaGTCAGGTCAGATACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGPWLVP*SGQIPP Trigger: AGGAGGTATCTGACCTGAGCATGGAACAAGCCAAGG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGAACTTCGGAAGATCTaGCCACAAATTTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWELRKI*PQISQA Trigger: TGCCTGGGAAATTTGTGGCCAGATCTTCCGAAGTTC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCAAGGTCCATTTGTCTaGCCAGCATGGTGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGQGPFV*PAWCHL Trigger: TAGATGGCACCATGCTGGCCAGACAAATGGACCTTG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCTCAGGATAGCCTTGTaGGTAGGTCTTGTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWLRIAL*VGLVQF Trigger: AAACTGGACAAGACCTACCCACAAGGCTATCCTGAG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGTCACATTCCACTGGTaGATGTCTTCAGGGCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWVTFHW*MSSGLT Trigger: TGTTAGCCCTGAAGACATCCACCAGTGGAATGTGAC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGAGGTCACATTCCACTaGTGGATGTCTTCAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGEVTFH*WMSSGL Trigger: TAGCCCTGAAGACATCCACCAGTGGAATGTGACCTC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | TACCTCAGCCACACTCAGCCCCTCAACTCCTATATACAAGGGGCCCTTCAGGAGTCCATGCTCACATTGTaGTGGCTGAGGGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSHTQPLNSYIQGALQESMLTL*WLRARR Trigger: CCTGCGGGCCCTCAGCCAGCACAATGTGAGCATGGA...CTCCTGAAGGGCCCCTTGTATATAGGAGTTGAGGGGCTGAGTGTGGCTGAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGAACTTCGGAAGATCTaGCCACAAATTTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGELRKI*PQISQA Trigger: TGCCTGGGAAATTTGTGGCCAGATCTTCCGAAGTTC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGTCACATTCCACTGGTaGATGTCTTCAGGGCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGVTFHW*MSSGLT Trigger: TGTTAGCCCTGAAGACATCCACCAGTGGAATGTGAC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGAATTCTGGTAGAAGATaGGGTCTTCATCCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWNSGRR*GLHPPC Trigger: ACAAGGTGGATGAAGACCTCATCTTCTACCAGAATT...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGTCTTGTCCAGTTTGTaGTTAAAGATACTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWVLSSL*LKILSC Trigger: GCAGCTCAGTATCTTTAAGCACAAACTGGACAAGAC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | TACCTCAGCCACACTCAGCCCCTCAACTCCTATATACAAGGGGCCCTTCAGGAGCACATTCTGGAAGGCTaGGCAGGCCTTCTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLSHTQPLNSYIQGALQEHILEG*AGLLVE Trigger: CTCTACCAGAAGGCCTGCTCAGCCTTCCAGAATGTG...CTCCTGAAGGGCCCCTTGTATATAGGAGTTGAGGGGCTGAGTGTGGCTGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGTCTTGTCCAGTTTGTaGTTAAAGATACTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGVLSSL*LKILSC Trigger: GCAGCTCAGTATCTTTAAGCACAAACTGGACAAGAC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCACCCAGGAATGTCTTaGTTTTCTCAAAGTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWHPGMS*FSQSIL Trigger: TAGAATACTTTGAGAAAATCAAGACATTCCTGGGTG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | GTACCTCAGCCACACTCAGCCCCTCAACTCCTATATACAAGGGGCCCTTCAGGAACCAGGGAATCCACCTaGAGCCTCTTGAAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPQPHSAPQLLYTRGPSGTREST*SLLKVA Trigger: AGCCACTTTCAAGAGGCTGCAGGTGGATTCCCTGGT...TCCTGAAGGGCCCCTTGTATATAGGAGTTGAGGGGCTGAGTGTGGCTGAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCACCCAGGAATGTCTTaGTTTTCTCAAAGTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRAPVELGPGALQGGGHPGMS*FSQSIL Trigger: TAGAATACTTTGAGAAAATCAAGACATTCCTGGGTG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATCCTGGCCCAAGGAGTaGGGCTCTGCTGGAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQSWPKE*GSAGEG Trigger: GCCTTCTCCAGCAGAGCCTCACTCCTTGGGCCAGGA...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGGCCTGTGGGGAGACTaGGGACAGGGCTGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMGLWGD*GQGWQS Trigger: ACTTTGCCAGCCCTGTCCCCAGTCTCCCCACAGGCC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACTGGAGGGTACCGAGTaGAGATCCTGGGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQLEGTE*RSWGLK Trigger: CTTCAGCCCCCAGGATCTGCACTCGGTACCCTCCAG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATCCATGCTCACATTGTaGTGGCTGAGGGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQSMLTL*WLRARR Trigger: CCTGCGGGCCCTCAGCCAGCACAATGTGAGCATGGA...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGCACCGTTCACAGCATaGAGGAGTGTGGCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMAPFTA*RSVASW Trigger: CCAGGAGGCCACACTCCTCCATGCTGTGAACGGTGC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGTGGGCACAAGCCTGTTaGCCTGGAAACATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMWAQAC*PGNMAG Trigger: CCCAGCCATGTTTCCAGGGCAACAGGCTTGTGCCCA...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACCAGATGCCTCTGGCTaGACTTGTCCAGGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQPDASG*TCPGLG Trigger: CCCAAGACCTGGACAAGTGCAGCCAGAGGCATCTGG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCCAGATGCCTCTGGCTaGACTTGTCCAGGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMPDASG*TCPGLG Trigger: CCCAAGACCTGGACAAGTGCAGCCAGAGGCATCTGG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAGCCTTTTCCTGGCTCTaGTCCAGGGGTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQAFSWL*SRGPWH Trigger: ATGCCAAGGACCCCTGGACCAGAGCCAGGAAAAGGC...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGCCTTTTCCTGGCTCTaGTCCAGGGGTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMAFSWL*SRGPWH Trigger: ATGCCAAGGACCCCTGGACCAGAGCCAGGAAAAGGC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGCAGGGCATCCAGGGTaGAGACTGACCACTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMAGHPG*RLTTSM Trigger: CATCGAAGTGGTCAGTCTCCACCCTGGATGCCCTGC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGTAGGGCTCCTTCCCTaGAGGGCAGGCTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMVGLLP*RAGFLF Trigger: GAACAGAAAGCCTGCCCTCCAGGGAAGGAGCCCTAC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAGGACCAGGTAGCCATTaGGGATGCCACCCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQGPGSH*GCHPEV Trigger: GACTTCAGGGTGGCATCCCCAATGGCTACCTGGTCC...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGGACCAGGTAGCCATTaGGGATGCCACCCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMGPGSH*GCHPEV Trigger: GACTTCAGGGTGGCATCCCCAATGGCTACCTGGTCC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGGAGTGAGGCTCTGCTaGAGAAGGCCTCTCGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMGVRLC*RRPLGH Trigger: ATGTCCGAGAGGCCTTCTCCAGCAGAGCCTCACTCC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAGGAGTGAGGCTCTGCTaGAGAAGGCCTCTCGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQGVRLC*RRPLGH Trigger: ATGTCCGAGAGGCCTTCTCCAGCAGAGCCTCACTCC...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGAAACATGGCTGGGTTaGGGAAGAGCAGCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMETWLG*GRAAGP Trigger: TGGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGTCCTCAGAACCTCCCTaGCTGCCTTTTCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMSSEPP*LPFPGS Trigger: AGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTGAGGA...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATCCTCAGAACCTCCCTaGCTGCCTTTTCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQSSEPP*LPFPGS Trigger: AGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTGAGGA...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACACATTCTGGAAGGCTaGGCAGGCCTTCTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQHILEG*AGLLVE Trigger: CTCTACCAGAAGGCCTGCTCAGCCTTCCAGAATGTG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCACATTCTGGAAGGCTaGGCAGGCCTTCTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMHILEG*AGLLVE Trigger: CTCTACCAGAAGGCCTGCTCAGCCTTCCAGAATGTG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | TACCTCAGCCACACTCAGCCCCTCAACTCCTATATACAAGGGGCCCTTCAGGAGCACCCAGGAATGTCTTaGTTTTCTCAAAGTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YLSHTQPLNSYIQGALQEHPGMS*FSQSIL Trigger: TAGAATACTTTGAGAAAATCAAGACATTCCTGGGTG...CTCCTGAAGGGCCCCTTGTATATAGGAGTTGAGGGGCTGAGTGTGGCTGAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGTAGGAAGCTTCGGCTaGAGATGGGACTTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMVGSFG*RWDFHR Trigger: CCTGTGGAAGTCCCATCTGCAGCCGAAGCTTCCTAC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCAGAACCTCCCTGACTaGCTTTTCCTGGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMQNLPD*LFLALV Trigger: GACCAGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACAGCATGGAGGAGTGTaGCCTCCTGGCTTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQQHGGV*PPGLSL Trigger: CAAAGACAAGCCAGGAGGCCACACTCCTCCATGCTG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCCCTGGAAACATGGCTaGGTTGAGGAAGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMPWKHG*VEEEQQ Trigger: CTGCTGCTCTTCCTCAACCCAGCCATGTTTCCAGGG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGCCTGGAGGGGTCTCTaGAGATGTGTTGCAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMAWRGL*RCVAAI Trigger: AATGGCTGCAACACATCTCCAGAGACCCCTCCAGGC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAGCCTGGAGGGGTCTCTaGAGATGTGTTGCAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQAWRGL*RCVAAI Trigger: AATGGCTGCAACACATCTCCAGAGACCCCTCCAGGC...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAATACCTCCTCACATGTaGGGCCAAGAAAGAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQIPPHM*GQERGL Trigger: CAGGCCTCTTTCTTGGCCTCACATGTGAGGAGGTAT...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGACCAGGGAATCCACCTaGAGCCTCTTGAAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMTREST*SLLKVA Trigger: AGCCACTTTCAAGAGGCTGCAGGTGGATTCCCTGGT...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAACCAGGGAATCCACCTaGAGCCTCTTGAAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQTREST*SLLKVA Trigger: AGCCACTTTCAAGAGGCTGCAGGTGGATTCCCTGGT...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAACAAGCCTGTTGCCCTaGAAACATGGCTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQTSLLP*KHGWVE Trigger: CTCAACCCAGCCATGTTTCCAGGGCAACAGGCTTGT...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAACCGAGTGCAGATCCTaGGGGCTGAAGTCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQTECRS*GLKSHR Trigger: TCTATGTGACTTCAGCCCCCAGGATCTGCACTCGGT...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCAAGAAAGAGGCCTGTaGGGAGACTGGCAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMQERGL*GDWQSQ Trigger: CTGACTTTGCCAGTCTCCCCACAGGCCTCTTTCTTG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACAAGAAAGAGGCCTGTaGGGAGACTGGCAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQQERGL*GDWQSQ Trigger: CTGACTTTGCCAGTCTCCCCACAGGCCTCTTTCTTG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238120.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGCAGATCCTGGGGGCTaGAGTCACATAGATAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMADPGG*SHIDSL Trigger: TAAGCTATCTATGTGACTTCAGCCCCCAGGATCTGC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCCTTGGCTTGTTCCATaGTCAGGTCAGATACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMPWLVP*SGQIPP Trigger: AGGAGGTATCTGACCTGAGCATGGAACAAGCCAAGG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCAAGGTCCATTTGTCTaGCCAGCATGGTGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMQGPFV*PAWCHL Trigger: TAGATGGCACCATGCTGGCCAGACAAATGGACCTTG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACAAGGTCCATTTGTCTaGCCAGCATGGTGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQQGPFV*PAWCHL Trigger: TAGATGGCACCATGCTGGCCAGACAAATGGACCTTG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAGAGGTCACATTCCACTaGTGGATGTCTTCAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQEVTFH*WMSSGL Trigger: TAGCCCTGAAGACATCCACCAGTGGAATGTGACCTC...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGAGGTCACATTCCACTaGTGGATGTCTTCAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMEVTFH*WMSSGL Trigger: TAGCCCTGAAGACATCCACCAGTGGAATGTGACCTC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCTCAGGATAGCCTTGTaGGTAGGTCTTGTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMLRIAL*VGLVQF Trigger: AAACTGGACAAGACCTACCCACAAGGCTATCCTGAG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACTCAGGATAGCCTTGTaGGTAGGTCTTGTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQLRIAL*VGLVQF Trigger: AAACTGGACAAGACCTACCCACAAGGCTATCCTGAG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGAATTCTGGTAGAAGATaGGGTCTTCATCCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: REHMPLFIEFKSPQTLAMNSGRR*GLHPPC Trigger: ACAAGGTGGATGAAGACCTCATCTTCTACCAGAATT...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR GCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAGTCTTGTCCAGTTTGTaGTTAAAGATACTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQVLSSL*LKILSC Trigger: GCAGCTCAGTATCTTTAAGCACAAACTGGACAAGAC...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS-3UTR TCA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACACCCAGGAATGTCTTaGTTTTCTCAAAGTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGSICHCLLSSRVLKLWQHPGMS*FSQSIL Trigger: TAGAATACTTTGAGAAAATCAAGACATTCCTGGGTG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCTGGTCCAGGGGTCCTaGGCATCCTGCCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWLVQGS*ASCQPG Trigger: CCCTGGCTGGCAGGATGCCAAGGACCCCTGGACCAG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTCTGGTCCAGGGGTCCTaGGCATCCTGCCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGLVQGS*ASCQPG Trigger: CCCTGGCTGGCAGGATGCCAAGGACCCCTGGACCAG...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGCCATAGCCAGCCCCTaGGCTTGTTCCATGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWAIASP*ACSMLR Trigger: CCTGAGCATGGAACAAGCCAAGGGGCTGGCTATGGC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGATGTCCATGCTCACATaGTGCTGGCTGAGGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWMSMLT*CWLRAR Trigger: GCGGGCCCTCAGCCAGCACAATGTGAGCATGGACAT...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGGGAAACATGGCTGGGTaGAGGAAGAGCAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWGNMAG*RKSSRS Trigger: GGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTCC...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTATGTCCATGCTCACATaGTGCTGGCTGAGGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGMSMLT*CWLRAR Trigger: GCGGGCCCTCAGCCAGCACAATGTGAGCATGGACAT...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGGAAACATGGCTGGGTaGAGGAAGAGCAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGGNMAG*RKSSRS Trigger: GGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTCC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGCAGCCATTCAGCTTaGACATCCTTGGGGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWCSHSA*TSLGML Trigger: GAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCA...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGTTCACAAGGTCCATTaGTCTGGCCAGCATGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGVHKVH*SGQHGA Trigger: GGCACCATGCTGGCCAGACAAATGGACCTTGTGAAC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS TCA 90 bp | TCACAGGCCAGGCCTCCGAGAGCCCGCACATCTGCCTCACTCACTTaGAATCCATACACGCCCTGGCACTTCAGAGCCTCCATCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQARPPRARTSASLT*NPYTPWHFRASISS Trigger: GCTGCTGATGGAGGCTCTGAAGTGCCAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGATGTGCGGGCTCTCGGAGGCCTGGCCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS GCA 90 bp | TTTCCCAGGCAGGTCACAGGCCAGGCCTCCGAGAGCCCGCACATCTaGCTCACTCACTTGAAATCCATACACGCCCTGGCACTTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPRQVTGQASESPHI*LTHLKSIHALALQS Trigger: GCTCTGAAGTGCCAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGATGTGCGGGCTCTCGGAGGCCTGGCCTGTGACCTGCCTGGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS CCA 90 bp | CTTCCCTGGAGGGCAGGCTTTCTGTTCTGCATCCCGTCGGAACCTTaGGTGTATGACGGTCAGCTTAGACCCCAGCCTGGAGGGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPWRAGFLFCIPSEP*VYDGQLRPQPGGVS Trigger: AGAGACCCCTCCAGGCTGGGGTCTAAGCTGACCGTCATACACCCAAGGTTCCGACGGGATGCAGAACAGAAAGCCTGCCCTCCAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGATCTGCCTCACTCACTaGAAATCCATACACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWICLTH*KSIHAL Trigger: CAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGAT...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTGCAGCCATTCAGCTTaGACATCCTTGGGGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGCSHSA*TSLGML Trigger: GAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTCCACCTGCAGCCTCTaGAAAGTGGCTATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGSTCSL*KVAMSM Trigger: CATGGACATAGCCACTTTCAAGAGGCTGCAGGTGGA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTATCTGCCTCACTCACTaGAAATCCATACACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGICLTH*KSIHAL Trigger: CAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGAT...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTGTCTCTGGAGATGTGTaGCAGCCATTCAGCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGVSGDV*QPFSFD Trigger: GTCAAAGCTGAATGGCTGCAACACATCTCCAGAGAC...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 90 bp | GCCCCTTGGCTTGTTCCATGCTCAGGTCAGATACCTCCTCACATGTaGGGCCAAGAAAGAGGCCTGTGGGGAGACTGGCAAAGTCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: APWLVPCSGQIPPHM*GQERGLWGDWQSQR Trigger: CCGCTGACTTTGCCAGTCTCCCCACAGGCCTCTTTCTTGGCCTCACATGTGAGGAGGTATCTGACCTGAGCATGGAACAAGCCAAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 90 bp | TTGCCCTGGAAACATGGCTGGGTTGAGGAAGAGCAGCAGGTCCAGTaGAAGAGCATTCAGTTCCTCGTCGGTGAGGTGCCTAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPWKHGWVEEEQQVQ*KSIQFLVGEVPRKA Trigger: CGCCTTCCTAGGCACCTCACCGACGAGGAACTGAATGCTCTTCCACTGGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTCCAGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | GTACCTCAGCCACACTCAGCCCCTCAACTCCTATATACAAGGGGCCCTTCAGGAATGTCCATGCTCACATaGTGCTGGCTGAGGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VPQPHSAPQLLYTRGPSGMSMLT*CWLRAR Trigger: GCGGGCCCTCAGCCAGCACAATGTGAGCATGGACAT...TCCTGAAGGGCCCCTTGTATATAGGAGTTGAGGGGCTGAGTGTGGCTGAGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
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| CDS CCA 90 bp | AATCCATACACGCCCTGGCACTTCAGAGCCTCCATCAGCAGCCTCTaGCGCTCCAGAGACCTCCGTGGGAGTACATCCACATTGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: NPYTPWHFRASISSL*RSRDLRGSTSTLAL Trigger: TAAAGCCAATGTGGATGTACTCCCACGGAGGTCTCTGGAGCGCCAGAGGCTGCTGATGGAGGCTCTGAAGTGCCAGGGCGTGTATGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 90 bp | CTGGTAGAAGATGAGGTCTTCATCCACCTTGTAGGGCTCCTTCCCTaGAGGGCAGGCTTTCTGTTCTGCATCCCGTCGGAACCTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVEDEVFIHLVGLLP*RAGFLFCIPSEPWV Trigger: CACCCAAGGTTCCGACGGGATGCAGAACAGAAAGCCTGCCCTCCAGGGAAGGAGCCCTACAAGGTGGATGAAGACCTCATCTTCTACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGTTGTCCTTTGCTGACTTaGAGCAGAGTTTTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVKRAPVELGPGALQGGGCPLLT*SRVFTV Trigger: CACAGTGAAAACTCTGCTCAAAGTCAGCAAAGGACA...ACCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CCTGGTCAAGAGGGCCCCAGTAGAGCTGGGACCAGGAGCCTTGCAGGGTGGTGGCTGAGCATTCATCTTTaGTCCTTTGCTGACTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGQEGPSRAGTRSLAGWWLSIHL*SFADFE Trigger: CTCAAAGTCAGCAAAGGACAAAAGATGAATGCTCAG...CCACCACCCTGCAAGGCTCCTGGTCCCAGCTCTACTGGGGCCCTCTTGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 90 bp | CCAGCCTGGAGGGGTCTCTGGAGATGTGTTGCAGCCATTCAGCTTTaGCATCCTTGGGGATGCTCTGGACGATGGACTCATCCAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: PAWRGLWRCVAAIQL*HPWGCSGRWTHPTL Trigger: CAGTGTTGGATGAGTCCATCGTCCAGAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCAACACATCTCCAGAGACCCCTCCAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 90 bp | TGGTGCCATCTACACAAGCCTCCAGCTCCCAATTCTGGTAGAAGATaGGGTCTTCATCCACCTTGTAGGGCTCCTTCCCTGGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WCHLHKPPAPNSGRR*GLHPPCRAPSLEGR Trigger: CCTGCCCTCCAGGGAAGGAGCCCTACAAGGTGGATGAAGACCTCATCTTCTACCAGAATTGGGAGCTGGAGGCTTGTGTAGATGGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS CCA 90 bp | CTTCAGAGCCTCCATCAGCAGCCTCTGGCGCTCCAGAGACCTCCGTaGGAGTACATCCACATTGGCTTTAGAGATGAGGGAGAAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQSLHQQPLALQRPP*EYIHIGFRDEGEEV Trigger: CACTTCTTCTCCCTCATCTCTAAAGCCAATGTGGATGTACTCCCACGGAGGTCTCTGGAGCGCCAGAGGCTGCTGATGGAGGCTCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS GCA 90 bp | GCATGGAGGAGTGTGGCCTCCTGGCTTGTCTTTGTAGTCTGGGTCTaGAGACGTGGTATCCACCCAAGACTAAGGAGAAGCAGTAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AWRSVASWLVFVVWV*RRGIHPRLRRSSRK Trigger: CTTCCTACTGCTTCTCCTTAGTCTTGGGTGGATACCACGTCTGCAGACCCAGACTACAAAGACAAGCCAGGAGGCCACACTCCTCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | TACCTCAGCCACACTCAGCCCCTCAACTCCTATATACAAGGGGCCCTTCAGGAGTCCACCTGCAGCCTCTaGAAAGTGGCTATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: YLSHTQPLNSYIQGALQESTCSL*KVAMSM Trigger: CATGGACATAGCCACTTTCAAGAGGCTGCAGGTGGA...CTCCTGAAGGGCCCCTTGTATATAGGAGTTGAGGGGCTGAGTGTGGCTGAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
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| CDS-3UTR CAA 90 bp | GTACCTCAGCCACACTCAGCCCCTCAACTCCTATATACAAGGGGCCCTTCAGGACTTCTCCTCAGGAAGTaGTCTCTCCTATACCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VPQPHSAPQLLYTRGPSGLLLRK*SLLYPT Trigger: GGTGGGGTATAGGAGAGACAACTTCCTGAGGAGAAG...TCCTGAAGGGCCCCTTGTATATAGGAGTTGAGGGGCTGAGTGTGGCTGAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
||
| CDS GCA 90 bp | ACATTGGCTTTAGAGATGAGGGAGAAGAAGTGGGCACAAGCCTGTTaGCCTGGAAACATGGCTGGGTTGAGGAAGAGCAGCAGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLALEMREKKWAQAC*PGNMAGLRKSSRSS Trigger: ACTGGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTCCAGGGCAACAGGCTTGTGCCCACTTCTTCTCCCTCATCTCTAAAGCCAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGCTGGTCCAGGGGTCCTaGGCATCCTGCCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMLVQGS*ASCQPG Trigger: CCCTGGCTGGCAGGATGCCAAGGACCCCTGGACCAG...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACTGGTCCAGGGGTCCTaGGCATCCTGCCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSICHCLLSSRVLKLWQLVQGS*ASCQPG Trigger: CCCTGGCTGGCAGGATGCCAAGGACCCCTGGACCAG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS CCA 90 bp | GAAGAAGTGACCCAGCTGCTGGATCAGGGACTCAGGATAGCCTTGTaGGTAGGTCTTGTCCAGTTTGTGCTTAAAGATACTGAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EEVTQLLDQGLRIAL*VGLVQFVLKDTELL Trigger: GAGCAGCTCAGTATCTTTAAGCACAAACTGGACAAGACCTACCCACAAGGCTATCCTGAGTCCCTGATCCAGCAGCTGGGTCACTTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGCCATAGCCAGCCCCTaGGCTTGTTCCATGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMAIASP*ACSMLR Trigger: CCTGAGCATGGAACAAGCCAAGGGGCTGGCTATGGC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGATGTCCATGCTCACATaGTGCTGGCTGAGGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMMSMLT*CWLRAR Trigger: GCGGGCCCTCAGCCAGCACAATGTGAGCATGGACAT...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGGAAACATGGCTGGGTaGAGGAAGAGCAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMGNMAG*RKSSRS Trigger: GGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTCC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAGTTCACAAGGTCCATTaGTCTGGCCAGCATGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGSICHCLLSSRVLKLWQVHKVH*SGQHGA Trigger: GGCACCATGCTGGCCAGACAAATGGACCTTGTGAAC...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGTTCACAAGGTCCATTaGTCTGGCCAGCATGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMVHKVH*SGQHGA Trigger: GGCACCATGCTGGCCAGACAAATGGACCTTGTGAAC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGTCCACCTGCAGCCTCTaGAAAGTGGCTATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMSTCSL*KVAMSM Trigger: CATGGACATAGCCACTTTCAAGAGGCTGCAGGTGGA...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 90 bp | CTTTTGTCCTTTGCTGACTTTGAGCAGAGTTTTCACTGTGTCTGGTaGGGTCACATTCCACTGGTGGATGTCTTCAGGGCTAACATATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSFADFEQSFHCVW*GHIPLVDVFRANIS Trigger: AGATATGTTAGCCCTGAAGACATCCACCAGTGGAATGTGACCTCACCAGACACAGTGAAAACTCTGCTCAAAGTCAGCAAAGGACAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAAATCTGCCTCACTCACTaGAAATCCATACACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSICHCLLSSRVLKLWQICLTH*KSIHAL Trigger: CAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGAT...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGATCTGCCTCACTCACTaGAAATCCATACACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMICLTH*KSIHAL Trigger: CAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGAT...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGGTCTCTGGAGATGTGTaGCAGCCATTCAGCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: REHMPLFIEFKSPQTLAMVSGDV*QPFSFD Trigger: GTCAAAGCTGAATGGCTGCAACACATCTCCAGAGAC...CATTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAATGTCCTTTGCTGACTTaGAGCAGAGTTTTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSICHCLLSSRVLKLWQCPLLT*SRVFTV Trigger: CACAGTGAAAACTCTGCTCAAAGTCAGCAAAGGACA...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS-3UTR CAA 90 bp | CAAGGGAGCATATGCCACTGTTTATTGAGTTCAAGAGTCCTCAAACTTTGGCAACTGAGCATTCATCTTTaGTCCTTTGCTGACTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGSICHCLLSSRVLKLWQLSIHL*SFADFE Trigger: CTCAAAGTCAGCAAAGGACAAAAGATGAATGCTCAG...TTGCCAAAGTTTGAGGACTCTTGAACTCAATAAACAGTGGCATATGCTCCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000238120.2 |
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| CDS CCA 72 bp | ACGCCCTGGCACTTCAGAGCCTCCATCAGCAGCCTCTaGCGCTCCAGAGACCTCCGTGGGAGTACATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TPWHFRASISSL*RSRDLRGSTST Trigger: TGTGGATGTACTCCCACGGAGGTCTCTGGAGCGCCAGAGGCTGCTGATGGAGGCTCTGAAGTGCCAGGGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS GCA 72 bp | CAGGTCACAGGCCAGGCCTCCGAGAGCCCGCACATCTaGCTCACTCACTTGAAATCCATACACGCCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QVTGQASESPHI*LTHLKSIHALA Trigger: TGCCAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGATGTGCGGGCTCTCGGAGGCCTGGCCTGTGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS GCA 72 bp | AGGCCTTCTGGTAGAGGAGACCCAGATGCCTCTGGCTaGACTTGTCCAGGTCTTGGGGCCCAACCAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RPSGRGDPDASG*TCPGLGAQPAT Trigger: TGTGGCTGGTTGGGCCCCAAGACCTGGACAAGTGCAGCCAGAGGCATCTGGGTCTCCTCTACCAGAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS CCA 72 bp | AGACCCAGATGCCTCTGGCTGCACTTGTCCAGGTCTTaGGGCCCAACCAGCCACATGACACTGGAGGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: RPRCLWLHLSRS*GPTSHMTLEGT Trigger: GGTACCCTCCAGTGTCATGTGGCTGGTTGGGCCCCAAGACCTGGACAAGTGCAGCCAGAGGCATCTGGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS CAA 72 bp | GAGACCCAGATGCCTCTGGCTGCACTTGTCCAGGTCTaGGGGCCCAACCAGCCACATGACACTGGAGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ETQMPLAALVQV*GPNQPHDTGGY Trigger: GTACCCTCCAGTGTCATGTGGCTGGTTGGGCCCCAAGACCTGGACAAGTGCAGCCAGAGGCATCTGGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS TCA 72 bp | AGGCCTCCGAGAGCCCGCACATCTGCCTCACTCACTTaGAATCCATACACGCCCTGGCACTTCAGAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPPRARTSASLT*NPYTPWHFRAS Trigger: GGAGGCTCTGAAGTGCCAGGGCGTGTATGGATTTCAAGTGAGTGAGGCAGATGTGCGGGCTCTCGGAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS TCA 72 bp | GGAGTGAGGCTCTGCTGGAGAAGGCCTCTCGGACATTaGAGTCCAGGACCAGGTAGCCATTGGGGATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GVRLCWRRPLGH*SPGPGSHWGCH Trigger: GTGGCATCCCCAATGGCTACCTGGTCCTGGACTTCAATGTCCGAGAGGCCTTCTCCAGCAGAGCCTCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS GCA 72 bp | GTAGGGCTCCTTCCCTGGAGGGCAGGCTTTCTGTTCTaGATCCCGTCGGAACCTTGGGTGTATGACGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGLLPWRAGFLF*IPSEPWVYDGQ Trigger: CTGACCGTCATACACCCAAGGTTCCGACGGGATGCAGAACAGAAAGCCTGCCCTCCAGGGAAGGAGCCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
||
| CDS GCA 72 bp | CTTGGGGATGCTCTGGACGATGGACTCATCCAACACTaGTACCAAGCTCTGCAGGGCATCCAGGGTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGDALDDGLIQH*YQALQGIQGGD Trigger: GTCTCCACCCTGGATGCCCTGCAGAGCTTGGTAGCAGTGTTGGATGAGTCCATCGTCCAGAGCATCCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 72 bp | ACAGGGCTGGCAAAGTCAGCGGCACCGTTCACAGCATaGAGGAGTGTGGCCTCCTGGCTTGTCTTTGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: TGLAKSAAPFTA*RSVASWLVFVV Trigger: GACTACAAAGACAAGCCAGGAGGCCACACTCCTCCATGCTGTGAACGGTGCCGCTGACTTTGCCAGCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 |
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| CDS CCA 72 bp | GGGAGACTGGCAAAGTCAGCGGCACCGTTCACAGCATaGAGGAGTGTGGCCTCCTGGCTTGTCTTTGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: GRLAKSAAPFTA*RSVASWLVFVV Trigger: GACTACAAAGACAAGCCAGGAGGCCACACTCCTCCATGCTGTGAACGGTGCCGCTGACTTTGCCAGTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 72 bp | GGCCATATTGGGTTCTTCCACTCCTCAGAACCTCCCTaGCTGCCTTTTCCTGGCTCTGGTCCAGGGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GHIGFFHSSEPP*LPFPGSGPGVL Trigger: AAGGACCCCTGGACCAGAGCCAGGAAAAGGCAGTCAGGGAGGTTCTGAGGAGTGGAAGAACCCAATATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 72 bp | GATGAGGTCTTCATCCACCTTGTAGGGCTCCTTCCCTaGAGGGCAGGCTTTCTGTTCTGCATCCCGTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: DEVFIHLVGLLP*RAGFLFCIPSE Trigger: TTCCGACGGGATGCAGAACAGAAAGCCTGCCCTCCAGGGAAGGAGCCCTACAAGGTGGATGAAGACCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 90 bp | CCCAGCCTGGAGGGGTCTCTGGAGATGTGTTGCAGCCATTCAGCTTaGACATCCTTGGGGATGCTCTGGACGATGGACTCATCCAACACT | + |
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Preference number: 6 (lower is better) Translates to: PSLEGSLEMCCSHSA*TSLGMLWTMDSSNT Trigger: AGTGTTGGATGAGTCCATCGTCCAGAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCAACACATCTCCAGAGACCCCTCCAGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 72 bp | TGGAGGAGTGTGGCCTCCTGGCTTGTCTTTGTAGTCTaGGTCTGCAGACGTGGTATCCACCCAAGACTAAGG | + |
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Preference number: 6 (lower is better) Translates to: WRSVASWLVFVV*VCRRGIHPRLR Trigger: CCTTAGTCTTGGGTGGATACCACGTCTGCAGACCCAGACTACAAAGACAAGCCAGGAGGCCACACTCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 72 bp | AAACATGGCTGGGTTGAGGAAGAGCAGCAGGTCCAGTaGAAGAGCATTCAGTTCCTCGTCGGTGAGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KHGWVEEEQQVQ*KSIQFLVGEVP Trigger: AGGCACCTCACCGACGAGGAACTGAATGCTCTTCCACTGGACCTGCTGCTCTTCCTCAACCCAGCCATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 90 bp | CACATTGGCTTTAGAGATGAGGGAGAAGAAGTGGGCACAAGCCTGTaGCCCTGGAAACATGGCTGGGTTGAGGAAGAGCAGCAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HIGFRDEGEEVGTSL*PWKHGWVEEEQQVQ Trigger: CTGGACCTGCTGCTCTTCCTCAACCCAGCCATGTTTCCAGGGCAACAGGCTTGTGCCCACTTCTTCTCCCTCATCTCTAAAGCCAATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 90 bp | AAGTTGTCTCTCCTATACCCCACCAGGGAATCCACCTGCAGCCTCTaGAAAGTGGCTATGTCCATGCTCACATTGTGCTGGCTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: KLSLLYPTRESTCSL*KVAMSMLTLCWLRA Trigger: GGCCCTCAGCCAGCACAATGTGAGCATGGACATAGCCACTTTCAAGAGGCTGCAGGTGGATTCCCTGGTGGGGTATAGGAGAGACAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
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| CDS TCA 72 bp | CTTGTTCCATGCTCAGGTCAGATACCTCCTCACATGTaGGGCCAAGAAAGAGGCCTGTGGGGAGACTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LVPCSGQIPPHM*GQERGLWGDWQ Trigger: TTGCCAGTCTCCCCACAGGCCTCTTTCTTGGCCTCACATGTGAGGAGGTATCTGACCTGAGCATGGAACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 72 bp | TCCTATACCCCACCAGGGAATCCACCTGCAGCCTCTTaGAAGTGGCTATGTCCATGCTCACATTGTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SYTPPGNPPAAS*KWLCPCSHCAG Trigger: GCCAGCACAATGTGAGCATGGACATAGCCACTTTCAAGAGGCTGCAGGTGGATTCCCTGGTGGGGTATAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
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| CDS GCA 72 bp | AGTGTGGCCTCCTGGCTTGTCTTTGTAGTCTGGGTCTaGAGACGTGGTATCCACCCAAGACTAAGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SVASWLVFVVWV*RRGIHPRLRRS Trigger: GCTTCTCCTTAGTCTTGGGTGGATACCACGTCTGCAGACCCAGACTACAAAGACAAGCCAGGAGGCCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | GAGGGGTCTCTGGAGATGTGTTGCAGCCATTCAGCTTaGACATCCTTGGGGATGCTCTGGACGATGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: EGSLEMCCSHSA*TSLGMLWTMDS Trigger: TGAGTCCATCGTCCAGAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCAACACATCTCCAGAGACCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | CTCCTATACCCCACCAGGGAATCCACCTGCAGCCTCTaGAAAGTGGCTATGTCCATGCTCACATTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLYPTRESTCSL*KVAMSMLTLCW Trigger: CCAGCACAATGTGAGCATGGACATAGCCACTTTCAAGAGGCTGCAGGTGGATTCCCTGGTGGGGTATAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238188.2 |
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| CDS CAA 90 bp | GAGGGGTCTCTGGAGATGTGTTGCAGCCATTCAGCTTTGACATCCTaGGGGATGCTCTGGACGATGGACTCATCCAACACTGCTACCAAG | + |
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Preference number: 6 (lower is better) Translates to: EGSLEMCCSHSALTS*GMLWTMDSSNTATK Trigger: CTTGGTAGCAGTGTTGGATGAGTCCATCGTCCAGAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCAACACATCTCCAGAGACCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 90 bp | ACTGAGCTGCTCATAGGTGAAGGGAATCTCGTTCACAAGGTCCATTaGTCTGGCCAGCATGGTGCCATCTACACAAGCCTCCAGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TELLIGEGNLVHKVH*SGQHGAIYTSLQLP Trigger: TGGGAGCTGGAGGCTTGTGTAGATGGCACCATGCTGGCCAGACAAATGGACCTTGTGAACGAGATTCCCTTCACCTATGAGCAGCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 72 bp | AGGGGTCTCTGGAGATGTGTTGCAGCCATTCAGCTTTaGCATCCTTGGGGATGCTCTGGACGATGGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: RGLWRCVAAIQL*HPWGCSGRWTH Trigger: ATGAGTCCATCGTCCAGAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCAACACATCTCCAGAGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 72 bp | CTACACAAGCCTCCAGCTCCCAATTCTGGTAGAAGATaGGGTCTTCATCCACCTTGTAGGGCTCCTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LHKPPAPNSGRR*GLHPPCRAPSL Trigger: CAGGGAAGGAGCCCTACAAGGTGGATGAAGACCTCATCTTCTACCAGAATTGGGAGCTGGAGGCTTGTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS GCA 72 bp | TCTCGTTCACAAGGTCCATTTGTCTGGCCAGCATGGTaGCATCTACACAAGCCTCCAGCTCCCAATTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SRSQGPFVWPAW*HLHKPPAPNSG Trigger: ACCAGAATTGGGAGCTGGAGGCTTGTGTAGATGGCACCATGCTGGCCAGACAAATGGACCTTGTGAACGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS TCA 72 bp | GCAGGTCCTTCACGGAGGCCCCACCCAGGAATGTCTTaGTTTTCTCAAAGTATTCTAGGCCGCTCACATTCT | + |
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Preference number: 6 (lower is better) Translates to: AGPSRRPHPGMS*FSQSILGRSHS Trigger: AGAATGTGAGCGGCCTAGAATACTTTGAGAAAATCAAGACATTCCTGGGTGGGGCCTCCGTGAAGGACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 ENSMUST00000238188.2 |
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| CDS CCA 72 bp | GAATCTCGTTCACAAGGTCCATTTGTCTGGCCAGCATaGTGCCATCTACACAAGCCTCCAGCTCCCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: ESRSQGPFVWPA*CHLHKPPAPNS Trigger: AGAATTGGGAGCTGGAGGCTTGTGTAGATGGCACCATGCTGGCCAGACAAATGGACCTTGTGAACGAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 72 bp | GCTTTTATCCTCCTCGGTCTTCAGGTCCACAATGTTTaGCCCCAGAAGTTTCTGTACCTCAGCCACACTCAG | + |
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Preference number: 6 (lower is better) Translates to: AFILLGLQVHNV*PQKFLYLSHTQ Trigger: CTGAGTGTGGCTGAGGTACAGAAACTTCTGGGGCCAAACATTGTGGACCTGAAGACCGAGGAGGATAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | GTTCTTCTGTCTTACAGCCATAGCCAGCCCCTTGGCTaGTTCCATGCTCAGGTCAGATACCTCCTCACATGT | + |
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Preference number: 6 (lower is better) Translates to: VLLSYSHSQPLG*FHAQVRYLLTC Trigger: ACATGTGAGGAGGTATCTGACCTGAGCATGGAACAAGCCAAGGGGCTGGCTATGGCTGTAAGACAGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | CTGGAGATGTGTTGCAGCCATTCAGCTTTGACATCCTaGGGGATGCTCTGGACGATGGACTCATCCAACACT | + |
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Preference number: 6 (lower is better) Translates to: LEMCCSHSALTS*GMLWTMDSSNT Trigger: AGTGTTGGATGAGTCCATCGTCCAGAGCATCCCCAAGGATGTCAAAGCTGAATGGCTGCAACACATCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | CTCATAGGTGAAGGGAATCTCGTTCACAAGGTCCATTaGTCTGGCCAGCATGGTGCCATCTACACAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LIGEGNLVHKVH*SGQHGAIYTSL Trigger: GAGGCTTGTGTAGATGGCACCATGCTGGCCAGACAAATGGACCTTGTGAACGAGATTCCCTTCACCTATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | GTGACCCAGCTGCTGGATCAGGGACTCAGGATAGCCTaGTGGGTAGGTCTTGTCCAGTTTGTGCTTAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: VTQLLDQGLRIA*WVGLVQFVLKD Trigger: ATCTTTAAGCACAAACTGGACAAGACCTACCCACAAGGCTATCCTGAGTCCCTGATCCAGCAGCTGGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | GGCTTTTATCCTCCTCGGTCTTCAGGTCCACAATGTTaGGCCCCAGAAGTTTCTGTACCTCAGCCACACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GFYPPRSSGPQC*APEVSVPQPHS Trigger: TGAGTGTGGCTGAGGTACAGAAACTTCTGGGGCCAAACATTGTGGACCTGAAGACCGAGGAGGATAAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 90 bp | TCTGAAGAAGTGACCCAGCTGCTGGATCAGGGACTCAGGATAGCCTaGTGGGTAGGTCTTGTCCAGTTTGTGCTTAAAGATACTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEEVTQLLDQGLRIA*WVGLVQFVLKDTEL Trigger: CAGCTCAGTATCTTTAAGCACAAACTGGACAAGACCTACCCACAAGGCTATCCTGAGTCCCTGATCCAGCAGCTGGGTCACTTCTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CCA 72 bp | ACCCAGCTGCTGGATCAGGGACTCAGGATAGCCTTGTaGGTAGGTCTTGTCCAGTTTGTGCTTAAAGATACT | + |
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Preference number: 6 (lower is better) Translates to: TQLLDQGLRIAL*VGLVQFVLKDT Trigger: AGTATCTTTAAGCACAAACTGGACAAGACCTACCCACAAGGCTATCCTGAGTCCCTGATCCAGCAGCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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| CDS CAA 72 bp | GCAGGCGACCAAGGCAATCGCCTGAGCATTCATCTTTaGTCCTTTGCTGACTTTGAGCAGAGTTTTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: AGDQGNRLSIHL*SFADFEQSFHC Trigger: ACAGTGAAAACTCTGCTCAAAGTCAGCAAAGGACAAAAGATGAATGCTCAGGCGATTGCCTTGGTCGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075884.8 ENSMUST00000236137.2 ENSMUST00000237359.2 ENSMUST00000238120.2 |
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