Pregenerated sensors for MSL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066415Ensembl transcript IDs: ENSMUST00000085177.5, ENSMUST00000189616.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTaGGCCTCGGATAATGGTAGAAATTGGAAGTGGCTGAACTTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: FAFPLHSHRSRCPQC*ASDNGRNWKWLNFL Trigger: GAGAAAGTTCAGCCACTTCCAATTTCTACCATTATCCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR GCA 90 bp | TTGAAGAGAGATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATaGCCCCAGTGTTGGGCCTCGGATAATGGTAGAAATTGGAAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: LKRDFAFPLHSHRSR*PQCWASDNGRNWKW Trigger: CCACTTCCAATTTCTACCATTATCCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 90 bp | CTGATCTTGGGTGTCGTGCCTCCATTGGGAACAGTTGCTATAGGTTaGAGAGAGATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: LILGVVPPLGTVAIG*REILLSRFTVTGAD Trigger: ATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAACCTATAGCAACTGTTCCCAATGGAGGCACGACACCCAAGATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 90 bp | GCCCCCAGTGTTGGGCCTCGGATAATGGTAGAAATTGGAAGTGGCTaGACTTTCTCACTGTCACTTTCAGATCTGGATCGTTTTCGATTC | + |
|
Preference number: 1 (lower is better) Translates to: APSVGPRIMVEIGSG*TFSLSLSDLDRFRF Trigger: GAATCGAAAACGATCCAGATCTGAAAGTGACAGTGAGAAAGTTCAGCCACTTCCAATTTCTACCATTATCCGAGGCCCAACACTGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR GCA 90 bp | TACAGTCTTGCTGATCTTGGGTGTCGTGCCTCCATTGGGAACAGTTaGTATAGGTTGAAGAGAGATTTTGCTTTCCCGCTTCACAGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: YSLADLGCRASIGNS*YRLKRDFAFPLHSH Trigger: GTGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAACCTATAGCAACTGTTCCCAATGGAGGCACGACACCCAAGATCAGCAAGACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 90 bp | CCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCAACTaGCTAGGACCTCCCATCAACAGAATGTTTATCTTCCCCATAAAG | + |
|
Preference number: 1 (lower is better) Translates to: PSQSLFNLGCALSSN*LGPPINRMFIFPIK Trigger: CTTTATGGGGAAGATAAACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR TCA 90 bp | ATGGCAATGCTGAGGGTACTCTCAGACATTGGAGATAAGCTAGCTTaGGGATCAGCTGTGGGTTCTGAAGTTGAAGGTAAAGGGGAATGT | + |
|
Preference number: 1 (lower is better) Translates to: MAMLRVLSDIGDKLA*GSAVGSEVEGKGEC Trigger: ACATTCCCCTTTACCTTCAACTTCAGAACCCACAGCTGATCCTCAAGCTAGCTTATCTCCAATGTCTGAGAGTACCCTCAGCATTGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CCA 90 bp | TGTCACTTTCAGATCTGGATCGTTTTCGATTCAACTTTGCTACCTTaGGAGTTGCTGCTGTACATGATAACCCATGAAGTGCAGGGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: CHFQIWIVFDSTLLP*ELLLYMITHEVQGW Trigger: CCAGCCCTGCACTTCATGGGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 90 bp | TTCAACTTTGCTACCTTGGGAGTTGCTGCTGTACATGATAACCCATaGAGTGCAGGGCTGGTGGACATGAAAACATTATGGCTAAGAGAC | + |
|
Preference number: 1 (lower is better) Translates to: FNFATLGVAAVHDNP*SAGLVDMKTLWLRD Trigger: GTCTCTTAGCCATAATGTTTTCATGTCCACCAGCCCTGCACTTCATGGGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR GCA 90 bp | CATGCAAGAGCATCTAAAGAAGATCCTCCGAGCTTTAGACCTAAATaGCCAGGCTTCACTAAAGGCCTTGATGAAGAAGCCTTCATTTTG | + |
|
Preference number: 1 (lower is better) Translates to: HARASKEDPPSFRPK*PGFTKGLDEEAFIL Trigger: CAAAATGAAGGCTTCTTCATCAAGGCCTTTAGTGAAGCCTGGGCATTTAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGCTCTTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR TCA 90 bp | CCTCAACACTCAGCAAAAGAGAGTCACCGGGTTTTATATCTTCACTaGAACTACAGATATCAATACCTGTGGAGCACAAGTCAGTGGCTA | + |
|
Preference number: 1 (lower is better) Translates to: PQHSAKESHRVLYLH*NYRYQYLWSTSQWL Trigger: TAGCCACTGACTTGTGCTCCACAGGTATTGATATCTGTAGTTTCAGTGAAGATATAAAACCCGGTGACTCTCTTTTGCTGAGTGTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 90 bp | CCAAAGGATTCTTCTCCATGTCTTTGTGAGGCGAGTAACCATCATTaGACATGCTGTGTGCCAAACCAAAACAACTTCAACACATCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: PKDSSPCLCEASNHH*TCCVPNQNNFNTSD Trigger: ATCTGATGTGTTGAAGTTGTTTTGGTTTGGCACACAGCATGTTCAATGATGGTTACTCGCCTCACAAAGACATGGAGAAGAATCCTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR GCA 90 bp | CTCCATGTCTTTGTGAGGCGAGTAACCATCATTGAACATGCTGTGTaGCAAACCAAAACAACTTCAACACATCAGATCTCACTAGATGTT | + |
|
Preference number: 1 (lower is better) Translates to: LHVFVRRVTIIEHAV*QTKTTSTHQISLDV Trigger: AACATCTAGTGAGATCTGATGTGTTGAAGTTGTTTTGGTTTGGCACACAGCATGTTCAATGATGGTTACTCGCCTCACAAAGACATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CCA 90 bp | ATTTTCATGATCAGAAATGGTATTATGTCAGCACAAAGGTTGAGCTaGACACATCAGCTTTTCAACAGGAGAAATATCAGTGCGGCATTT | + |
|
Preference number: 1 (lower is better) Translates to: IFMIRNGIMSAQRLS*THQLFNRRNISAAF Trigger: AAATGCCGCACTGATATTTCTCCTGTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCTGATCATGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CCA 90 bp | TATATTGCCGACCTCCCATGCATCAAGAAACAAAGTGATCAAATTTaGGAAGCAATTAGGTACTCCATGAATTTTAAGATACTAGGAAAG | + |
|
Preference number: 1 (lower is better) Translates to: YIADLPCIKKQSDQI*EAIRYSMNFKILGK Trigger: CTTTCCTAGTATCTTAAAATTCATGGAGTACCTAATTGCTTCCCAAATTTGATCACTTTGTTTCTTGATGCATGGGAGGTCGGCAATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR CCA 90 bp | GATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCTGGAGCACAAGTCAGTaGCTACCGTGTCACAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: DFAFPLHSHRSRCPQCWAWSTSQ*LPCHRQ Trigger: CTGTCTGTGACACGGTAGCCACTGACTTGTGCTCCA...GGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCTCGGTCAACTTTGCTACCTTaGGAGTTGCTGCTGTACATG | + |
|
Preference number: 2 (lower is better) Translates to: LLSRFTVTGADAPSVGPRSTLLP*ELLLYM Trigger: CATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGA...CCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCTCGGCTCCTCACAAAACAATaGTCCGTCATTAAGCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLSRFTVTGADAPSVGPRLLTKQ*SVIKQS Trigger: GCTTTGCTTAATGACGGATCATTGTTTTGTGAGGAG...CCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCTCGGTTCTATTATATCCCGTaGCAGTGTCGTCTGGGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LLSRFTVTGADAPSVGPRFYYIP*QCRLGY Trigger: ATAACCCAGACGACACTGGCACGGGATATAATAGAA...CCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCCGTGCCAGTGTCGTCTaGGTTATATATTCACACAGT | + |
|
Preference number: 2 (lower is better) Translates to: DFAFPLHSHRSRCPQCWARASVV*VIYSHS Trigger: ACTGTGTGAATATATAACCCAGACGACACTGGCACG...GGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCTCGGACCAAATCTATCTATTaGAAGCCCATTGTAAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSRFTVTGADAPSVGPRTKSIY*KPIVSR Trigger: CCTACTTACAATGGGCTTTCAATAGATAGATTTGGT...CCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCGAAATTGGAAGTGGCTaGACTTTCTCACTGTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: DFAFPLHSHRSRCPQCWAEIGSG*TFSLSL Trigger: AAGTGACAGTGAGAAAGTTCAGCCACTTCCAATTTC...GGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CAA 90 bp | GCTGATCTTGGGTGTCGTGCCTCCATTGGGAACAGTTGCTATAGGTaGAAGAGAGATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ADLGCRASIGNSCYR*KRDFAFPLHSHRSR Trigger: TCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAACCTATAGCAACTGTTCCCAATGGAGGCACGACACCCAAGATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGGAGCACAAGTCAGTGGCTACCGTGTCACAGACAGGTGGCAGGTTGTCAGACAGCAATTCACTAGGATaGTTAACTGCTTGTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VEHKSVATVSQTGGRLSDSNSLG*LTACSP Trigger: AGGAGAACAAGCAGTTAAGCATCCTAGTGAATTGCT...GTCTGACAACCTGCCACCTGTCTGTGACACGGTAGCCACTGACTTGTGCTCCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR GCA 90 bp | GATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCAGAAGAACAGTCAACTaGTTCTATTATATCCCGTGC | + |
|
Preference number: 2 (lower is better) Translates to: DFAFPLHSHRSRCPQCWARRTVN*FYYIPC Trigger: GCACGGGATATAATAGAAGCAGTTGACTGTTCTTCT...GGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CAA 90 bp | TTTCAGATCTGGATCGTTTTCGATTCAACTTTGCTACCTTGGGAGTaGCTGCTGTACATGATAACCCATGAAGTGCAGGGCTGGTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: FQIWIVFDSTLLPWE*LLYMITHEVQGWWT Trigger: TGTCCACCAGCCCTGCACTTCATGGGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCTATCAGTGCGGCATTTaGAGGCAGCACAAAGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QINQGPHILMSTLSILPTYQCGI*RQHKVS Trigger: GGAGACTTTGTGCTGCCTTCAAATGCCGCACTGATA...GGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCAGCAATCTTTATGGACTaGCTGATACCACTTCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: FSLHLVSPCLTWAVLSQAAIFMD*LIPLPY Trigger: GTAAGGAAGTGGTATCAGTCAGTCCATAAAGATTGC...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR TCA 90 bp | AATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATCACATCCCCAGAAAATaGCACCAGGATACACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: NQGPHILMSTLSILPTSHHIPRK*HQDTLQ Trigger: TTGTAGTGTATCCTGGTGTCATTTTCTGGGGATGTG...ATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTCTCACTGTCACTTTCAGATCTGGATCGTTTTCGATTCAACTTTGCTACCGGAGATAAGCTAGCTTaGGGATCAGCTGTGGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TFSLSLSDLDRFRFNFATGDKLA*GSAVGS Trigger: AGAACCCACAGCTGATCCTCAAGCTAGCTTATCTCC...GGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGACAGTGAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCTTCCTGGCATAAAATGATGACTAGGCATCTTTTCCTTTACTGCTTTGTCGTCCATTGGATACAGTaGCTTCCAAGTTTGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RASWHKMMTRHLFLYCFVVHWIQ*LPSLAA Trigger: TGCAGCCAAACTTGGAAGCCACTGTATCCAATGGAC...GACAAAGCAGTAAAGGAAAAGATGCCTAGTCATCATTTTATGCCAGGAAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CAA 90 bp | CTTTCTCACTGTCACTTTCAGATCTGGATCGTTTTCGATTCAACTTaGCTACCTTGGGAGTTGCTGCTGTACATGATAACCCATGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSHCHFQIWIVFDST*LPWELLLYMITHEV Trigger: CACTTCATGGGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGACAGTGAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTGGATTTAGAGTGAGATTTCTTGGATCCATGTTCATGACTCTTTTTCATGTACATGATAACCCATaGAGTGCAGGGCTGGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: WLGFRVRFLGSMFMTLFHVHDNP*SAGLVD Trigger: GTCCACCAGCCCTGCACTTCATGGGTTATCATGTAC...ATGAAAAAGAGTCATGAACATGGATCCAAGAAATCTCACTCTAAATCCAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CAA 90 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATaGCCGACCTCCCATGCATCAAGAAACAAAGTGATCAAATTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QINQGPHILMSTLSI*PTSHASRNKVIKFG Trigger: CCCAAATTTGATCACTTTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCAAAGCAGCAACTCTTTaGAATCACAAGGTTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: QINQGPHILMSTLSILPTKAATL*NHKVLS Trigger: AGAGAGAACCTTGTGATTTCAAAGAGTTGCTGCTTT...GGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCTTCCTGGCATAAAATGATGACTAGGCATCTTTTCCTTTACTGCTTTGTCGTGTCAAACACAGAGTaGAGGATGAATCTGAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RASWHKMMTRHLFLYCFVVSNTE*RMNLKV Trigger: AACCTTCAGATTCATCCTTCACTCTGTGTTTGACAC...GACAAAGCAGTAAAGGAAAAGATGCCTAGTCATCATTTTATGCCAGGAAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTGGATTTAGAGTGAGATTTCTTGGATCCATGTTCATGACTCTTTTTCATAAAGTACAGTCTTGCTaGTCTTGGGTGTCGTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WLGFRVRFLGSMFMTLFHKVQSC*SWVSCL Trigger: GAGGCACGACACCCAAGATCAGCAAGACTGTACTTT...ATGAAAAAGAGTCATGAACATGGATCCAAGAAATCTCACTCTAAATCCAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACTTTCAGATCTGGATCGTTTTCGATTCAACTTTGCTACCTTGGGAGTTGCTACTAGGATGCTTAACTaGTTGTTCTCCTCAAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLSDLDRFRFNFATLGVATRMLN*LFSSNC Trigger: GCAGTTTGAGGAGAACAAGCAGTTAAGCATCCTAGT...AGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACTTTCAGATCTGGATCGTTTTCGATTCAACTTTGCTACCTTGGGAGTTGCTGCTTCCAAGTTTGGCTaGAAATTAGGACAGCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: SLSDLDRFRFNFATLGVAASKFG*KLGQQT Trigger: AGTTTGCTGTCCTAATTTGCAGCCAAACTTGGAAGC...AGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCTTCCTGGCATAAAATGATGACTAGGCATCTTTTCCTTTACTGCTTTGTCTTTTCGATTCAACTTTaGTACCTTGGGAGTTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RASWHKMMTRHLFLYCFVFSIQL*YLGSCC Trigger: GCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAA...GACAAAGCAGTAAAGGAAAAGATGCCTAGTCATCATTTTATGCCAGGAAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CAA 90 bp | GCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCACTTaGTCTATATTGCCGACCTCCCATGCATCAAGAAACAAAGTGATC | + |
|
Preference number: 2 (lower is better) Translates to: AILQINQGPHILMST*SILPTSHASRNKVI Trigger: GATCACTTTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCGAACATTGCTCAAAGTaGAAGGACTTAGGATTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QINQGPHILMSTLSILPTEHCSK*KDLGFS Trigger: AGAAAATCCTAAGTCCTTTCACTTTGAGCAATGTTC...GGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR GCA 90 bp | TCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGAGCTTTAGACCTAAATaGCCAGGCTTCACTAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SLAILQINQGPHILMSTLSFRPK*PGFTKG Trigger: GCCTTTAGTGAAGCCTGGGCATTTAGGTCTAAAGCT...CAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAAATGGTATTATGTCAGCACAAAGGTTGAGCTGGACACATCAGCTTTTCAACCAACAGAACCATAGCTaGCGTAAAACTGTAGCTATT | + |
|
Preference number: 2 (lower is better) Translates to: RNGIMSAQRLSWTHQLFNQQNHS*RKTVAI Trigger: AATAGCTACAGTTTTACGGCAGCTATGGTTCTGTTG...GTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTTTATGGACTGACTaGTACCACTTCCTTACATTT | + |
|
Preference number: 2 (lower is better) Translates to: SLAILQINQGPHILMSTLSLWTD*YHFLTF Trigger: AAATGTAAGGAAGTGGTATCAGTCAGTCCATAAAGA...CAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CCA 72 bp | CCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTaGGCCTCGGATAATGGTAGAAATTGGAAGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLHSHRSRCPQC*ASDNGRNWKWL Trigger: CAGCCACTTCCAATTTCTACCATTATCCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR GCA 72 bp | GATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATaGCCCCAGTGTTGGGCCTCGGATAATGGTAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: DFAFPLHSHRSR*PQCWASDNGRN Trigger: ATTTCTACCATTATCCGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CCA 72 bp | GGAGCACAAGTCAGTGGCTACCGTGTCACAGACAGGTaGCAGGTTGTCAGACAGATCCTCAGTTTTTATATC | + |
|
Preference number: 3 (lower is better) Translates to: GAQVSGYRVTDR*QVVRQILSFYI Trigger: GATATAAAAACTGAGGATCTGTCTGACAACCTGCCACCTGTCTGTGACACGGTAGCCACTGACTTGTGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 72 bp | GCTACCTTGGGAGTTGCTGCTGTACATGATAACCCATaGAGTGCAGGGCTGGTGGACATGAAAACATTATGG | + |
|
Preference number: 3 (lower is better) Translates to: ATLGVAAVHDNP*SAGLVDMKTLW Trigger: CCATAATGTTTTCATGTCCACCAGCCCTGCACTTCATGGGTTATCATGTACAGCAGCAACTCCCAAGGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR GCA 72 bp | GCTGATCTTGGGTGTCGTGCCTCCATTGGGAACAGTTaGTATAGGTTGAAGAGAGATTTTGCTTTCCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ADLGCRASIGNS*YRLKRDFAFPL Trigger: AAGCGGGAAAGCAAAATCTCTCTTCAACCTATAGCAACTGTTCCCAATGGAGGCACGACACCCAAGATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTATAGGTTGAAGAGAGATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGACTGTGGGTTCTGAAGTaGAAGGTAAAGGGGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: CYRLKRDFAFPLHSHRSRLWVLK*KVKGNV Trigger: CACATTCCCCTTTACCTTCAACTTCAGAACCCACAG...TCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAACCTATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR GCA 72 bp | GCATCTAAAGAAGATCCTCCGAGCTTTAGACCTAAATaGCCAGGCTTCACTAAAGGCCTTGATGAAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASKEDPPSFRPK*PGFTKGLDEEA Trigger: GGCTTCTTCATCAAGGCCTTTAGTGAAGCCTGGGCATTTAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR TCA 72 bp | CTGAGGGTACTCTCAGACATTGGAGATAAGCTAGCTTaGGGATCAGCTGTGGGTTCTGAAGTTGAAGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRVLSDIGDKLA*GSAVGSEVEGK Trigger: TTTACCTTCAACTTCAGAACCCACAGCTGATCCTCAAGCTAGCTTATCTCCAATGTCTGAGAGTACCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 72 bp | GTTGGGCCTCGGATAATGGTAGAAATTGGAAGTGGCTaGACTTTCTCACTGTCACTTTCAGATCTGGATCGT | + |
|
Preference number: 3 (lower is better) Translates to: VGPRIMVEIGSG*TFSLSLSDLDR Trigger: ACGATCCAGATCTGAAAGTGACAGTGAGAAAGTTCAGCCACTTCCAATTTCTACCATTATCCGAGGCCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR CAA 90 bp | CATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGCATCAAGAAACAAACACCTAGTCAGTCCTaGTTTAACCTGGGCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HTNVHFVYIADLPCIKKQTPSQS*FNLGCA Trigger: AGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGT...TTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CCA 72 bp | CAGATCTGGATCGTTTTCGATTCAACTTTGCTACCTTaGGAGTTGCTGCTGTACATGATAACCCATGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QIWIVFDSTLLP*ELLLYMITHEV Trigger: CACTTCATGGGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR TCA 72 bp | TCTTCTCCATGTCTTTGTGAGGCGAGTAACCATCATTaGACATGCTGTGTGCCAAACCAAAACAACTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSPCLCEASNHH*TCCVPNQNNFN Trigger: GTTGAAGTTGTTTTGGTTTGGCACACAGCATGTTCAATGATGGTTACTCGCCTCACAAAGACATGGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR-3UTR CAA 90 bp | TCACTTTCAGATCTGGATCGTTTTCGATTCAACTTTGCTACCTTGGGAGTTGCTACACGTCAATTGTATTaGGATGTTCAGGTGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSDLDRFRFNFATLGVATRQLY*DVQVKG Trigger: TCCCTTCACCTGAACATCCAAATACAATTGACGTGT...AGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTATAGGTTGAAGAGAGATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGAAGCAAACTTCTGTATTaGAAACAGTTTCTAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CYRLKRDFAFPLHSHRSRSKLLY*KQFLSC Trigger: GCAGCTTAGAAACTGTTTCAAATACAGAAGTTTGCT...TCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAACCTATAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCTTCCCCATAAAGTTAGTAGGAGGAAGTACATTAAACTGAAACAGTTTGTGATGTCAGCACAAAGGTaGAGCTGGACACATCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: YLPHKVSRRKYIKLKQFVMSAQR*SWTHQL Trigger: AAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACAT...CACAAACTGTTTCAGTTTAATGTACTTCCTCCTACTAACTTTATGGGGAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR TCA 72 bp | TCAGCAAAAGAGAGTCACCGGGTTTTATATCTTCACTaGAACTACAGATATCAATACCTGTGGAGCACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAKESHRVLYLH*NYRYQYLWSTS Trigger: ACTTGTGCTCCACAGGTATTGATATCTGTAGTTTCAGTGAAGATATAAAACCCGGTGACTCTCTTTTGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR GCA 72 bp | ATCAGAAGAACAGTCAACTGCTTCTATTATATCCCGTaGCAGTGTCGTCTGGGTTATATATTCACACAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IRRTVNCFYYIP*QCRLGYIFTQF Trigger: AAACTGTGTGAATATATAACCCAGACGACACTGGCACGGGATATAATAGAAGCAGTTGACTGTTCTTCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CCA 72 bp | ATCAGAAATGGTATTATGTCAGCACAAAGGTTGAGCTaGACACATCAGCTTTTCAACAGGAGAAATATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: IRNGIMSAQRLS*THQLFNRRNIS Trigger: ACTGATATTTCTCCTGTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | GATTTTGCTTTCCCGCTTCACAGTCACAGGAGCAGATGCCCCCAGTGTTGGGCCCTCCGGGGTCGTAGTTaGGCACTAGGCGGCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DFAFPLHSHRSRCPQCWALRGRS*ALGGSR Trigger: CCGCGAGCCGCCTAGTGCTCAACTACGACCCCGGAG...GGCCCAACACTGGGGGCATCTGCTCCTGTGACTGTGAAGCGGGAAAGCAAAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTCTCCAAGGCCTTTTCTaGCACCGCAAATGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVLQGLF*HRKCLQ Trigger: CTGGAGGCATTTGCGGTGCCAGAAAAGGCCTTGGAG...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | CATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGCATCAAGAAACAACTCCGGGGTCGTAGTTaGGCACTAGGCGGCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTNVHFVYIADLPCIKKQLRGRS*ALGGSR Trigger: CCGCGAGCCGCCTAGTGCTCAACTACGACCCCGGAG...TTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCAGTCACAGGAGCAGATaGCCCCAGTGTTGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QINQGPHILMSTLSILPTSHRSR*PQCWAS Trigger: CGAGGCCCAACACTGGGGGCATCTGCTCCTGTGACT...GGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTGGTGGAGTTGGTGGGTaGAATAGGATCTTGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVGGVGG*NRILKQ Trigger: TTGCTTCAAGATCCTATTGCACCCACCAACTCCACC...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | CTCCATGTCTTTGTGAGGCGAGTAACCATCATTGAACATGCTGTGTGCCAAACCAAAGTGAGCCTGGTCTaGTCCAAGGCCTTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHVFVRRVTIIEHAVCQTKVSLV*SKAFSG Trigger: GCCAGAAAAGGCCTTGGAGCAGACCAGGCTCACTTT...GGTTTGGCACACAGCATGTTCAATGATGGTTACTCGCCTCACAAAGACATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CAA 72 bp | GGGTGTCGTGCCTCCATTGGGAACAGTTGCTATAGGTaGAAGAGAGATTTTGCTTTCCCGCTTCACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCRASIGNSCYR*KRDFAFPLHSH Trigger: GTGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAACCTATAGCAACTGTTCCCAATGGAGGCACGACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCAGGAGATAAGCTAGCTTaGGGATCAGCTGTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLHLVSPCLTWAVLSQAGDKLA*GSAVGS Trigger: AGAACCCACAGCTGATCCTCAAGCTAGCTTATCTCC...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTAGTGGCTTCCAAGTTTaGCTGCAAATTAGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVSGFQV*LQIRTA Trigger: TGCTGTCCTAATTTGCAGCCAAACTTGGAAGCCACT...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTGTGTCAAACACAGAGTaGAGGATGAATCTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVVSNTE*RMNLKV Trigger: AACCTTCAGATTCATCCTTCACTCTGTGTTTGACAC...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTGGCTTGGATTTAGAGTaGGATTTCTTGGATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVGLDLE*DFLDPC Trigger: ACATGGATCCAAGAAATCTCACTCTAAATCCAAGCC...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | AATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATAAAGTACAGTCTTGCTaGTCTTGGGTGTCGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQGPHILMSTLSILPTSHKVQSC*SWVSCL Trigger: GAGGCACGACACCCAAGATCAGCAAGACTGTACTTT...ATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | AGAAATGGTATTATGTCAGCACAAAGGTTGAGCTGGACACATCAGCTTTTCAACTTCTGGCACCGCAAATaGCTCCAGCTTCTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNGIMSAQRLSWTHQLFNFWHRK*LQLLLP Trigger: GGGGAGAAGAAGCTGGAGGCATTTGCGGTGCCAGAA...GTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | CTCCATGTCTTTGTGAGGCGAGTAACCATCATTGAACATGCTGTGTGCCAAACCCGTGCCAGTGTCGTCTaGGTTATATATTCACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHVFVRRVTIIEHAVCQTRASVV*VIYSHS Trigger: ACTGTGTGAATATATAACCCAGACGACACTGGCACG...GGTTTGGCACACAGCATGTTCAATGATGGTTACTCGCCTCACAAAGACATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCATCAACTTTGCTACCTTaGGAGTTGCTGCTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: FSLHLVSPCLTWAVLSQASTLLP*ELLLYM Trigger: CATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGA...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | CTCCATGTCTTTGTGAGGCGAGTAACCATCATTGAACATGCTGTGTGCCAAACCCTTGGTAGGGCTTCCTaGCATAAAATGATGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHVFVRRVTIIEHAVCQTLGRAS*HKMMTR Trigger: CCTAGTCATCATTTTATGCCAGGAAGCCCTACCAAG...GGTTTGGCACACAGCATGTTCAATGATGGTTACTCGCCTCACAAAGACATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CAA 72 bp | TGGATCGTTTTCGATTCAACTTTGCTACCTTGGGAGTaGCTGCTGTACATGATAACCCATGAAGTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WIVFDSTLLPWE*LLYMITHEVQG Trigger: GCCCTGCACTTCATGGGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR GCA 90 bp | CTCCATGTCTTTGTGAGGCGAGTAACCATCATTGAACATGCTGTGTGCCAAACCACTGCTCATAGTCTTTaGACCAGCTACATGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHVFVRRVTIIEHAVCQTTAHSL*TSYMKV Trigger: AACCTTCATGTAGCTGGTGCAAAGACTATGAGCAGT...GGTTTGGCACACAGCATGTTCAATGATGGTTACTCGCCTCACAAAGACATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCAGCTTCCAAGTTTGGCTaGAAATTAGGACAGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FSLHLVSPCLTWAVLSQAASKFG*KLGQQT Trigger: AGTTTGCTGTCCTAATTTGCAGCCAAACTTGGAAGC...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCATTTTCGATTCAACTTTaGTACCTTGGGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLHLVSPCLTWAVLSQAFSIQL*YLGSCC Trigger: GCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAA...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | CATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGCATCAAGAAACAATGGAGCACAAGTCAGTaGCTACCGTGTCACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HTNVHFVYIADLPCIKKQWSTSQ*LPCHRQ Trigger: CTGTCTGTGACACGGTAGCCACTGACTTGTGCTCCA...TTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | CATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGCATCAAGAAACAAAGATGCCCCCAGTGTTaGGCCTCGGATAATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTNVHFVYIADLPCIKKQRCPQC*ASDNGR Trigger: TCTACCATTATCCGAGGCCCAACACTGGGGGCATCT...TTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | TCAATGGCAATAAGTATAATGCATAAGTCTGGGCACATTTGGGGCATTATTCCACGTGTCACAGACAGGTaGCAGGTTGTCAGACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SMAISIMHKSGHIWGIIPRVTDR*QVVRQI Trigger: GATCTGTCTGACAACCTGCCACCTGTCTGTGACACG...TGGAATAATGCCCCAAATGTGCCCAGACTTATGCATTATACTTATTGCCATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CAA 72 bp | CAAGGCCCTCACATACTAATGTCCACTTTGTCTATATaGCCGACCTCCCATGCATCAAGAAACAAAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QGPHILMSTLSI*PTSHASRNKVI Trigger: GATCACTTTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CAA 72 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTaGTCTATATTGCCGACCTCCCATGCATCAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QINQGPHILMST*SILPTSHASRN Trigger: GTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCATTTGCACCAGCTACATaGAGGTTTCATCATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLHLVSPCLTWAVLSQAFAPAT*RFHHHF Trigger: AAAATGATGATGAAACCTTCATGTAGCTGGTGCAAA...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | CTGAACTTTCTCACTGTCACTTTCAGATCTGGATCGTTTTCGATTCAACTTTGCGGTGGAGTTGGTGGGTaGAATAGGATCTTGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LNFLTVTFRSGSFSIQLCGGVGG*NRILKQ Trigger: TTGCTTCAAGATCCTATTGCACCCACCAACTCCACC...GCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGACAGTGAGAAAGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR GCA 90 bp | TCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGACTGGTGCTGGTACTTaGGTTACGCACAGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLAILQINQGPHILMSTLTGAGT*VTHSNA Trigger: AGCATTGCTGTGCGTAACGCAAGTACCAGCACCAGT...CAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | ATCGTTTTCGATTCAACTTTGCTACCTTGGGAGTTGCTGCTGTACATGATAACCACTGAGGTCTCTGGCTaGAGGTGCATCAAGATTATA | + |
|
Preference number: 4 (lower is better) Translates to: IVFDSTLLPWELLLYMITTEVSG*RCIKII Trigger: TATAATCTTGATGCACCTCCAGCCAGAGACCTCAGT...GGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| 3UTR CAA 72 bp | TGTCACTTTCAGATCTGGATCGTTTTCGATTCAACTTaGCTACCTTGGGAGTTGCTGCTGTACATGATAACC | + |
|
Preference number: 4 (lower is better) Translates to: CHFQIWIVFDST*LPWELLLYMIT Trigger: GGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGATCCAGATCTGAAAGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR TCA 90 bp | GCAATTAGGTACTCCATGAATTTTAAGATACTAGGAAAGTTTGGGAGATTTGCAGTACATGATAACCCATaGAGTGCAGGGCTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AIRYSMNFKILGKFGRFAVHDNP*SAGLVD Trigger: GTCCACCAGCCCTGCACTTCATGGGTTATCATGTAC...TGCAAATCTCCCAAACTTTCCTAGTATCTTAAAATTCATGGAGTACCTAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTCCTGGCATAAAATGATGACTAGGCATCTTTTCCTTTACTGCTTTGTCTGCCTTTACAAGTTTTaGAGACATAGTGTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RASWHKMMTRHLFLYCFVCLYKF*RHSVGR Trigger: CCTGCCAACACTATGTCTGCAAAACTTGTAAAGGCA...GACAAAGCAGTAAAGGAAAAGATGCCTAGTCATCATTTTATGCCAGGAAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR GCA 90 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCAGCAATTCACTAGGATaGTTAACTGCTTGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QINQGPHILMSTLSILPTSNSLG*LTACSP Trigger: AGGAGAACAAGCAGTTAAGCATCCTAGTGAATTGCT...GGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | TCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGGTCCATTGGATACAGTaGCTTCCAAGTTTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAILQINQGPHILMSTLVHWIQ*LPSLAA Trigger: TGCAGCCAAACTTGGAAGCCACTGTATCCAATGGAC...CAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CAA 72 bp | ATGCTTTTAGTAGATAAAAGTACAGTCTTGCTGATCTaGGGTGTCGTGCCTCCATTGGGAACAGTTGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: MLLVDKSTVLLI*GVVPPLGTVAI Trigger: TATAGCAACTGTTCCCAATGGAGGCACGACACCCAAGATCAGCAAGACTGTACTTTTATCTACTAAAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGGGTGCAATAGGATCTTaGAGCAAATGTCCGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLAILQINQGPHILMSTLGAIGS*SKCPQT Trigger: TGTTTGCGGACATTTGCTTCAAGATCCTATTGCACC...CAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | AGAAATGGTATTATGTCAGCACAAAGGTTGAGCTGGACACATCAGCTTTTCAACCTCCTCACAAAACAATaGTCCGTCATTAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNGIMSAQRLSWTHQLFNLLTKQ*SVIKQS Trigger: GCTTTGCTTAATGACGGATCATTGTTTTGTGAGGAG...GTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTGCTTTACATGCAAGAGCATCTAAAGAAGATCCTCCGAGCTTTAGACCTAGAAATTGGAAGTGGCTaGACTTTCTCACTGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FVLYMQEHLKKILRALDLEIGSG*TFSLSL Trigger: AAGTGACAGTGAGAAAGTTCAGCCACTTCCAATTTC...TAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGCTCTTGCATGTAAAGCACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTGCTTTACATGCAAGAGCATCTAAAGAAGATCCTCCGAGCTTTAGACCTAAGAACACTTGGATTTTaGGTAGCACGCCCACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: FVLYMQEHLKKILRALDLRTLGF*VARPHL Trigger: TAAATGTGGGCGTGCTACTCAAAATCCAAGTGTTCT...TAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGCTCTTGCATGTAAAGCACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | CATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGCATCAAGAAACAATGCCTTTACAAGTTTTaGAGACATAGTGTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTNVHFVYIADLPCIKKQCLYKF*RHSVGR Trigger: CCTGCCAACACTATGTCTGCAAAACTTGTAAAGGCA...TTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCTTTACATGCAAGAGCATCTAAAGAAGATCCTCCGAGCTTTAGACCTAACTAGGATGCTTAACTaGTTGTTCTCCTCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVLYMQEHLKKILRALDLTRMLN*LFSSNC Trigger: GCAGTTTGAGGAGAACAAGCAGTTAAGCATCCTAGT...TAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGCTCTTGCATGTAAAGCACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | AGAAATGGTATTATGTCAGCACAAAGGTTGAGCTGGACACATCAGCTTTTCAACGTTGAAGAGAGATTTTaGTTTCCCGCTTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNGIMSAQRLSWTHQLFNVEERF*FPASQS Trigger: TGACTGTGAAGCGGGAAAGCAAAATCTCTCTTCAAC...GTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | AGAAATGGTATTATGTCAGCACAAAGGTTGAGCTGGACACATCAGCTTTTCAACGGTAGAAATTGGAAGTaGCTGAACTTTCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNGIMSAQRLSWTHQLFNGRNWK*LNFLTV Trigger: GACAGTGAGAAAGTTCAGCCACTTCCAATTTCTACC...GTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | CAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCGATAATGGTAGAAATTaGAAGTGGCTGAACTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QINQGPHILMSTLSILPTDNGRN*KWLNFL Trigger: GAGAAAGTTCAGCCACTTCCAATTTCTACCATTATC...GGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | TCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCACTTTGTTCTATTATATCCCGTaGCAGTGTCGTCTGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLAILQINQGPHILMSTLFYYIP*QCRLGY Trigger: ATAACCCAGACGACACTGGCACGGGATATAATAGAA...CAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | CATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGCATCAAGAAACAATCCATTGGGAACAGTTaGTATAGGTTGAAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HTNVHFVYIADLPCIKKQSIGNS*YRLKRD Trigger: ATCTCTCTTCAACCTATAGCAACTGTTCCCAATGGA...TTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | AATTCATCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCGCATGTAAGAACACTTaGATTTTGAGTAGCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSSLAILQINQGPHILMSACKNT*ILSSTP Trigger: GGGCGTGCTACTCAAAATCCAAGTGTTCTTACATGC...GGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGATGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR TCA 90 bp | CATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGCATCAAGAAACAAACCAAATCTATCTATTaGAAGCCCATTGTAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTNVHFVYIADLPCIKKQTKSIY*KPIVSR Trigger: CCTACTTACAATGGGCTTTCAATAGATAGATTTGGT...TTGTTTCTTGATGCATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | GCAATTAGGTACTCCATGAATTTTAAGATACTAGGAAAGTTTGGGAGATTTGCAAGATATCAATACCTGTaGAGCACAAGTCAGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AIRYSMNFKILGKFGRFARYQYL*STSQWL Trigger: TAGCCACTGACTTGTGCTCCACAGGTATTGATATCT...TGCAAATCTCCCAAACTTTCCTAGTATCTTAAAATTCATGGAGTACCTAATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR GCA 90 bp | TATCTTCCCCATAAAGTTAGTAGGAGGAAGTACATTAAACTGAAACAGTTTGTGAGAAGAACAGTCAACTaGTTCTATTATATCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLPHKVSRRKYIKLKQFVRRTVN*FYYIPC Trigger: GCACGGGATATAATAGAAGCAGTTGACTGTTCTTCT...CACAAACTGTTTCAGTTTAATGTACTTCCTCCTACTAACTTTATGGGGAAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CCA 90 bp | TATCTTCCCCATAAAGTTAGTAGGAGGAAGTACATTAAACTGAAACAGTTTGTGTATCATCATGTGTACTaGCAGCCAAAAATGTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLPHKVSRRKYIKLKQFVYHHVY*QPKMSL Trigger: TAACGACATTTTTGGCTGCCAGTACACATGATGATA...CACAAACTGTTTCAGTTTAATGTACTTCCTCCTACTAACTTTATGGGGAAGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| 3UTR CAA 72 bp | AGAGAAACTTGTGCTAAAAACAACCTGAATTCATCATaGGCAATATTACAGATCAATCAAGGCCCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: RETCAKNNLNSS*AILQINQGPHI Trigger: TATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGATGAATTCAGGTTGTTTTTAGCACAAGTTTCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTGTAGCAAGGGCAGCGTaGGCCGCGGCATGTAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVVARAA*AAACKN Trigger: GTTCTTACATGCCGCGGCCAACGCTGCCCTTGCTAC...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS GCA 90 bp | CGCACAGCAATGCTAGTCACATTAATGCCCAAAGTGAGCCTGGTCTaGTCCAAGGCCTTTTCTGGCACCGCAAATGCCTCCAGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTAMLVTLMPKVSLV*SKAFSGTANASSFF Trigger: GAAGAAGCTGGAGGCATTTGCGGTGCCAGAAAAGGCCTTGGAGCAGACCAGGCTCACTTTGGGCATTAATGTGACTAGCATTGCTGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTCACTGGTGCTGGTACTaGCGTTACGCACAGCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVHWCWY*RYAQQC Trigger: GCATTGCTGTGCGTAACGCAAGTACCAGCACCAGTG...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS CCA 90 bp | CACATTAATGCCCAAAGTGAGCCTGGTCTGCTCCAAGGCCTTTTCTaGCACCGCAAATGCCTCCAGCTTCTTCTCCCCATTGGCCATATA | + |
|
Preference number: 5 (lower is better) Translates to: HINAQSEPGLLQGLF*HRKCLQLLLPIGHI Trigger: TATATGGCCAATGGGGAGAAGAAGCTGGAGGCATTTGCGGTGCCAGAAAAGGCCTTGGAGCAGACCAGGCTCACTTTGGGCATTAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTTGTTGGCAGGTGGAGTaGGTGGGTGCAATAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVCWQVE*VGAIGS Trigger: AGATCCTATTGCACCCACCAACTCCACCTGCCAACA...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCATTTGCAGACATAGTGTaGGCAGGTGGAGTTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSLHLVSPCLTWAVLSQAFADIV*AGGVGG Trigger: CCCACCAACTCCACCTGCCAACACTATGTCTGCAAA...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS CCA 90 bp | GTTAGAGTAGCAAGGGCAGCGTTGGCCGCGGCATGTAAGAACACTTaGATTTTGAGTAGCACGCCCACATTTACATCCTTTCTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRVARAALAAACKNT*ILSSTPTFTSFLFL Trigger: CAGGAAAAGAAAGGATGTAAATGTGGGCGTGCTACTCAAAATCCAAGTGTTCTTACATGCCGCGGCCAACGCTGCCCTTGCTACTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTGTGCTCTCTCAAGCAACTGACTAGGACCTCCCATCAACAGAATGTTTTCAACTTTGCTACCTaGGGAGTTGCTGCTGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: PGLCSLKQLTRTSHQQNVFNFAT*GVAAVH Trigger: ATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAA...AACATTCTGTTGATGGGAGGTCCTAGTCAGTTGCTTGAGAGAGCACAGCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | TCACTAGGATGCTTAACTGCTTGTTCTCCTCAAACTGCTCATAGTCTTTGCACCTTTGCAGACATAGTGTaGGCAGGTGGAGTTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGCLTACSPQTAHSLCTFADIV*AGGVGG Trigger: CCCACCAACTCCACCTGCCAACACTATGTCTGCAAA...GGTGCAAAGACTATGAGCAGTTTGAGGAGAACAAGCAGTTAAGCATCCTAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCATTGCTACCTTGGGAGTaGCTGCTGTACATGATAACC | + |
|
Preference number: 5 (lower is better) Translates to: FSLHLVSPCLTWAVLSQALLPWE*LLYMIT Trigger: GGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAA...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | AATCAAGGCCCTCACATACTAATGTCCACTTTGTCTATATTGCCGACCTCCCATGGTGTCGTGCCTCCATaGGGAACAGTTGCTATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NQGPHILMSTLSILPTSHGVVPP*GTVAIG Trigger: ACCTATAGCAACTGTTCCCAATGGAGGCACGACACC...ATGGGAGGTCGGCAATATAGACAAAGTGGACATTAGTATGTGAGGGCCTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS GCA 90 bp | TTTACAAGTTTTGCAGACATAGTGTTGGCAGGTGGAGTTGGTGGGTaGAATAGGATCTTGAAGCAAATGTCCGCAAACACAGCACGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FTSFADIVLAGGVGG*NRILKQMSANTARE Trigger: CTCTCGTGCTGTGTTTGCGGACATTTGCTTCAAGATCCTATTGCACCCACCAACTCCACCTGCCAACACTATGTCTGCAAAACTTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | ATCGTTTTCGATTCAACTTTGCTACCTTGGGAGTTGCTGCTGTACATGATAACCTGTTGGCAGGTGGAGTaGGTGGGTGCAATAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: IVFDSTLLPWELLLYMITCWQVE*VGAIGS Trigger: AGATCCTATTGCACCCACCAACTCCACCTGCCAACA...GGTTATCATGTACAGCAGCAACTCCCAAGGTAGCAAAGTTGAATCGAAAACGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGGTATTATGTCAGCACAAAGGTTGAGCTGGACACATCAGCTTTTCAACACAGTCTTGCTGATCTaGGGTGTCGTGCCTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RNGIMSAQRLSWTHQLFNTVLLI*GVVPPL Trigger: CAATGGAGGCACGACACCCAAGATCAGCAAGACTGT...GTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCTTTACATGCAAGAGCATCTAAAGAAGATCCTCCGAGCTTTAGACCTACTGTGGGTTCTGAAGTaGAAGGTAAAGGGGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FVLYMQEHLKKILRALDLLWVLK*KVKGNV Trigger: CACATTCCCCTTTACCTTCAACTTCAGAACCCACAG...TAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGCTCTTGCATGTAAAGCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTACACCTAGTCAGTCCTTGTTTAACCTGGGCTGTGCTCTCTCAAGCAAACAGTTGCTATAGGTaGAAGAGAGATTTTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLHLVSPCLTWAVLSQANSCYR*KRDFAF Trigger: GAAAGCAAAATCTCTCTTCAACCTATAGCAACTGTT...TGCTTGAGAGAGCACAGCCCAGGTTAAACAAGGACTGACTAGGTGTAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCTTTACATGCAAGAGCATCTAAAGAAGATCCTCCGAGCTTTAGACCTAGGCCATATAGGAGTTTaGGCAGCCACGACATATACA | + |
|
Preference number: 5 (lower is better) Translates to: FVLYMQEHLKKILRALDLGHIGV*AATTYT Trigger: TGTATATGTCGTGGCTGCCAAAACTCCTATATGGCC...TAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGCTCTTGCATGTAAAGCACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCTTTACATGCAAGAGCATCTAAAGAAGATCCTCCGAGCTTTAGACCTATTTTTGTACACAGTCTaGGTAGGGCTTCCTGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: FVLYMQEHLKKILRALDLFLYTV*VGLPGI Trigger: TATGCCAGGAAGCCCTACCAAGACTGTGTACAAAAA...TAGGTCTAAAGCTCGGAGGATCTTCTTTAGATGCTCTTGCATGTAAAGCACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTCCTGGCATAAAATGATGACTAGGCATCTTTTCCTTTACTGCTTTGTCGGGTGCAATAGGATCTaGAAGCAAATGTCCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RASWHKMMTRHLFLYCFVGCNRI*KQMSFK Trigger: TTTGAAGGACATTTGCTTCAAGATCCTATTGCACCC...GACAAAGCAGTAAAGGAAAAGATGCCTAGTCATCATTTTATGCCAGGAAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGGTATTATGTCAGCACAAAGGTTGAGCTGGACACATCAGCTTTTCAACACACGTCAATTGTATTaGGATGTTCAGGTGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNGIMSAQRLSWTHQLFNTRQLY*DVQVKG Trigger: TCCCTTCACCTGAACATCCAAATACAATTGACGTGT...GTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTGCTGACATAATACCATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | TATCTTCCCCATAAAGTTAGTAGGAGGAAGTACATTAAACTGAAACAGTTTGTGGGGTGCAATAGGATCTaGAAGCAAATGTCCGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YLPHKVSRRKYIKLKQFVGCNRI*KQMSAN Trigger: GTTTGCGGACATTTGCTTCAAGATCCTATTGCACCC...CACAAACTGTTTCAGTTTAATGTACTTCCTCCTACTAACTTTATGGGGAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | GCAATTAGGTACTCCATGAATTTTAAGATACTAGGAAAGTTTGGGAGATTTGCAGATAAAAGTACAGTCTaGCTGATCTTGGGTGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AIRYSMNFKILGKFGRFADKSTV*LILGVV Trigger: CACGACACCCAAGATCAGCAAGACTGTACTTTTATC...TGCAAATCTCCCAAACTTTCCTAGTATCTTAAAATTCATGGAGTACCTAATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | AATTCATCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCTATTACACACGTCAATaGTATTTGGATGTTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSSLAILQINQGPHILMSYYTRQ*YLDVQV Trigger: CACCTGAACATCCAAATACAATTGACGTGTGTAATA...GGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGATGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS-3UTR CAA 90 bp | AATTCATCATTGGCAATATTACAGATCAATCAAGGCCCTCACATACTAATGTCCAGCAAACTTCTGTATTaGAAACAGTTTCTAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSLAILQINQGPHILMSSKLLY*KQFLSC Trigger: GCAGCTTAGAAACTGTTTCAAATACAGAAGTTTGCT...GGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCAATGATGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS CCA 72 bp | GCCCAAAGTGAGCCTGGTCTGCTCCAAGGCCTTTTCTaGCACCGCAAATGCCTCCAGCTTCTTCTCCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: AQSEPGLLQGLF*HRKCLQLLLPI Trigger: AATGGGGAGAAGAAGCTGGAGGCATTTGCGGTGCCAGAAAAGGCCTTGGAGCAGACCAGGCTCACTTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS GCA 72 bp | CCTGGTCTGCTCCAAGGCCTTTTCTGGCACCGCAAATaGCTCCAGCTTCTTCTCCCCATTGGCCATATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLLQGLFWHRK*LQLLLPIGHIG Trigger: TCCTATATGGCCAATGGGGAGAAGAAGCTGGAGGCATTTGCGGTGCCAGAAAAGGCCTTGGAGCAGACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS TCA 72 bp | TGTTGGCAGGTGGAGTTGGTGGGTGCAATAGGATCTTaGAGCAAATGTCCGCAAACACAGCACGAGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CWQVELVGAIGS*SKCPQTQHERD Trigger: GTCCCTCTCGTGCTGTGTTTGCGGACATTTGCTTCAAGATCCTATTGCACCCACCAACTCCACCTGCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS CAA 72 bp | GTGTTGGCAGGTGGAGTTGGTGGGTGCAATAGGATCTaGAAGCAAATGTCCGCAAACACAGCACGAGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLAGGVGGCNRI*KQMSANTAREG Trigger: TCCCTCTCGTGCTGTGTTTGCGGACATTTGCTTCAAGATCCTATTGCACCCACCAACTCCACCTGCCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS CAA 90 bp | GTAGCAAGGGCAGCGTTGGCCGCGGCATGTAAGAACACTTGGATTTaGAGTAGCACGCCCACATTTACATCCTTTCTTTTCCTGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VARAALAAACKNTWI*SSTPTFTSFLFLGL Trigger: AAGCCCCAGGAAAAGAAAGGATGTAAATGTGGGCGTGCTACTCAAAATCCAAGTGTTCTTACATGCCGCGGCCAACGCTGCCCTTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS CCA 72 bp | GCAAGGGCAGCGTTGGCCGCGGCATGTAAGAACACTTaGATTTTGAGTAGCACGCCCACATTTACATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARAALAAACKNT*ILSSTPTFTSF Trigger: AAAGGATGTAAATGTGGGCGTGCTACTCAAAATCCAAGTGTTCTTACATGCCGCGGCCAACGCTGCCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||
| CDS CAA 90 bp | GCAGACATAGTGTTGGCAGGTGGAGTTGGTGGGTGCAATAGGATCTaGAAGCAAATGTCCTTCAAACCATCTGTTGTAGAACCTGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ADIVLAGGVGGCNRI*KQMSFKPSVVEPGA Trigger: TGCCCCAGGTTCTACAACAGATGGTTTGAAGGACATTTGCTTCAAGATCCTATTGCACCCACCAACTCCACCTGCCAACACTATGTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189616.2 |
||
| CDS GCA 72 bp | TTTGCAGACATAGTGTTGGCAGGTGGAGTTGGTGGGTaGAATAGGATCTTGAAGCAAATGTCCGCAAACACA | + |
|
Preference number: 6 (lower is better) Translates to: FADIVLAGGVGG*NRILKQMSANT Trigger: TGTGTTTGCGGACATTTGCTTCAAGATCCTATTGCACCCACCAACTCCACCTGCCAACACTATGTCTGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085177.5 |
||