Pregenerated sensors for MSL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052915Ensembl transcript IDs: ENSMUST00000037915.9, ENSMUST00000037930.13, ENSMUST00000107485.8, ENSMUST00000107487.10, ENSMUST00000126969.2
Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCCTGAGAACGTCTCTTCCCACAGTGGCAATGCCATTCTCGCATaGTCAGCAGATGGGCCAACCACACACCCTACATACCTTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: APENVSSHSGNAILA*SADGPTTHPTYLGF Trigger: GAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCATCTGCTGAGCATGCGAGAATGGCATTGCCACTGTGGGAAGAGACGTTCTCAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR TCA 90 bp | TGTTGGGGGTGGGAAGGAACTTCAGTTACCCATCAACTAAGAAAGTaGACCAGCTGCACGTCTCCTCCCACATGCCACTGTCACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: CWGWEGTSVTHQLRK*TSCTSPPTCHCHRA Trigger: TGCTCTGTGACAGTGGCATGTGGGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCTTCCCACCCCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR TCA 90 bp | TTCTGTCACAGAGAGACCACGCTCCTAAGCAGATGGAGTTACAAGTaGAAACCCAGAGCCACACACACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: FCHRETTLLSRWSYK*KPRATHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTTCACTTGTAACTCCATCTGCTTAGGAGCGTGGTCTCTCTGTGACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR TCA 90 bp | TGGGCTACTGCAATCCAAGTGAACTCTCCACATCTTAGAACCTTGTaGAGTGCAGTAAAGGAAGACTGTCGGTCTTTGGCAGATTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: WATAIQVNSPHLRTL*SAVKEDCRSLADSS Trigger: GGAGGAATCTGCCAAAGACCGACAGTCTTCCTTTACTGCACTTCACAAGGTTCTAAGATGTGGAGAGTTCACTTGGATTGCAGTAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR GCA 90 bp | ATAAAGTTCATTAGGTACAACTGTTTGTTTCAAGCTGTAGACATCTaGCAGGCAGAGGAAGCATATCCTTCCATACCCTACCCCCGGCCC | + |
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Preference number: 1 (lower is better) Translates to: IKFIRYNCLFQAVDI*QAEEAYPSIPYPRP Trigger: GGGCCGGGGGTAGGGTATGGAAGGATATGCTTCCTCTGCCTGGCAGATGTCTACAGCTTGAAACAAACAGTTGTACCTAATGAACTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR GCA 90 bp | GAGAACACCCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTaGAGGAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCATTTC | + |
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Preference number: 1 (lower is better) Translates to: ENTQRPPSQVSHNIN*RNSRARQSVSSMHF Trigger: GAAATGCATAGAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR CCA 90 bp | ACCAAAGCAATAGAATCCACTTCAGTCCTGCCAGATAGCACCTCATaGATTCCTCTCAGTCTAGCAAAAACAGGATCTGAGGACTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: TKAIESTSVLPDSTS*IPLSLAKTGSEDSS Trigger: AGAGGAGTCCTCAGATCCTGTTTTTGCTAGACTGAGAGGAATCCATGAGGTGCTATCTGGCAGGACTGAAGTGGATTCTATTGCTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR CCA 90 bp | CACACCCTACATACCTTGGCTTCTCCTCTAAAAGTGCTAATAATTTaGGGCCATGTTCTCTTCAAGGATAAGAGCCCTACCCTTCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: HTLHTLASPLKVLII*GHVLFKDKSPTLLE Trigger: CTCTAGAAGGGTAGGGCTCTTATCCTTGAAGAGAACATGGCCCCAAATTATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR GCA 90 bp | CACATCTCCCAGTGTTGTGAGCAGACACATACATTGAGCACATTTTaGTGTAATTCCATCTATTTGCAATGCCTGCACAGTGTCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: HISQCCEQTHTLSTF*CNSIYLQCLHSVCL Trigger: GAGACAGACACTGTGCAGGCATTGCAAATAGATGGAATTACAGCAAAATGTGCTCAATGTATGTGTCTGCTCACAACACTGGGAGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR TCA 90 bp | TTACTGGCAAACACATCTCCCAGTGTTGTGAGCAGACACATACATTaGGCACATTTTGCTGTAATTCCATCTATTTGCAATGCCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: LLANTSPSVVSRHIH*AHFAVIPSICNACT Trigger: TGTGCAGGCATTGCAAATAGATGGAATTACAGCAAAATGTGCTCAATGTATGTGTCTGCTCACAACACTGGGAGATGTGTTTGCCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR CCA 90 bp | TACAAAGGAGAATTAAGAGCAGCAAGATCATCCAAGAACACTACATaGACTGCTGGAATAATTCCTTTCAAAGTCAAACCCAGGGAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: YKGELRAARSSKNTT*TAGIIPFKVKPREQ Trigger: TTGCTCCCTGGGTTTGACTTTGAAAGGAATTATTCCAGCAGTCCATGTAGTGTTCTTGGATGATCTTGCTGCTCTTAATTCTCCTTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR CCA 90 bp | ACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGGTTACAAGTGGCCCCTaGGACCCCCAAGTCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: TTPTLFRRRTREARGQGRVTSGP*DPQVSP Trigger: GGGGGAGACTTGGGGGTCCCAGGGGCCACTTGTAAC...CCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR CAA 90 bp | CAGGGAGGCACGGGGTCAGGGCAGGCACAGCTCCTACAGGAAGGGTaGCTCCATCTTAGACACGCTAATGAAGAGCCCTTTACCCCGTTA | + |
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Preference number: 2 (lower is better) Translates to: QGGTGSGQAQLLQEG*LHLRHANEEPFTPL Trigger: TAACGGGGTAAAGGGCTCTTCATTAGCGTGTCTAAGATGGAGCAACCCTTCCTGTAGGAGCTGTGCCTGCCCTGACCCCGTGCCTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR-3UTR CCA 90 bp | GACCACGCTCCTAAGCAGATGGAGTTACAAGTGAAAACCCAGAGCCACACACACGTTACAAGTGGCCCCTaGGACCCCCAAGTCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: DHAPKQMELQVKTQSHTHVTSGP*DPQVSP Trigger: GGGGGAGACTTGGGGGTCCCAGGGGCCACTTGTAAC...GTGTGTGTGGCTCTGGGTTTTCACTTGTAACTCCATCTGCTTAGGAGCGTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCAGAGCCACACACACACACACACACACACACACACACACACACACACACATGCTACAACTATCTaGAGACAGGCTACCGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KTQSHTHTHTHTHTHTHTHATTI*RQATAS Trigger: GCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTCACCCCAGCCTCCTCAGCATCCCCAAACCAAAGGACATCTAGGAGAGGACAAACATCTTCTTTGTTaGGGGTGGGAAGGAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: LSPQPPQHPQTKGHLGEDKHLLC*GWEGTS Trigger: TGAAGTTCCTTCCCACCCCCAACAAAGAAGATGTTT...GTCCTCTCCTAGATGTCCTTTGGTTTGGGGATGCTGAGGAGGCTGGGGTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR GCA 90 bp | CCCAACCAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGTCACACAATATCAATTaGAGGAACAGTCGTGCACGG | + |
|
Preference number: 2 (lower is better) Translates to: PNQKLPLAPENTQRPPSQSHNIN*RNSRAR Trigger: CCGTGCACGACTGTTCCTGCAATTGATATTGTGTGA...CTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTGGTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR CAA 90 bp | TTCTCGCATGCTCAGCAGATGGGCCAACCACACACCCTACATACCTaGGCTTCTCCTCTAAAAGTGCTAATAATTTGGGGCCATGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FSHAQQMGQPHTLHT*ASPLKVLIIWGHVL Trigger: GAGAACATGGCCCCAAATTATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCATCTGCTGAGCATGCGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGGCCAACCACACACCCTACATACCTTGGCTTCTCCTCTAAAAGTGCTAATAACAGGGATCTTACACTaGGACCAAAGTGGCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: MGQPHTLHTLASPLKVLITGILH*DQSGLG Trigger: TCCCAGGCCACTTTGGTCTCAGTGTAAGATCCCTGT...TATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR TCA 90 bp | GAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACTCACACGTGTTAGCGTaGCCGCCACCACTAGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: EQSCTAKCKFYAFHSTENSHVLA*PPPLGK Trigger: TTTACCTAGTGGTGGCGGTCACGCTAACACGTGTGA...GTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACGACTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAACAACCAATGGGCTACTGCAATCCAAGTGAACTCTCCACATCTTAGAACCATTACCATTGGCCCCTaGGAACACCCAAAGACCACC | + |
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Preference number: 2 (lower is better) Translates to: MNNQWATAIQVNSPHLRTITIGP*EHPKTT Trigger: GGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAAT...GGTTCTAAGATGTGGAGAGTTCACTTGGATTGCAGTAGCCCATTGGTTGTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCAGGGCCTCTCTTTCTGCTGAAGACTGAATCTCACAGTGTTGTACCCCACTCTCTCGGAACAGCATaGTACAACTATCTGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SAGPLFLLKTESHSVVPHSLGTA*YNYLKT Trigger: TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGA...GTGGGGTACAACACTGTGAGATTCAGTCTTCAGCAGAAAGAGAGGCCCTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTTGTGATGAGCAACTTACTGGCAAACACATCTCCCAGTGTTGTGAGCAGTCTATTTGCAATGCCTaGACAGTGTCTGTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: CSCDEQLTGKHISQCCEQSICNA*TVSVSG Trigger: GCCAGAGACAGACACTGTGCAGGCATTGCAAATAGA...CTGCTCACAACACTGGGAGATGTGTTTGCCAGTAAGTTGCTCATCACAAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCACACATACAGGTCTCTaGTATTCTCTCGGAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSTHTGL*YSLGTA Trigger: TGCTGTTCCGAGAGAATAGCAGAGACCTGTATGTGT...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTACAAGTGAAAACCCAGAGCCACACACACACACACACACACACACACACTGCTTCATTACTTCATaGTATTCCTCGGGCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: GVTSENPEPHTHTHTHTHCFITS*YSSGPK Trigger: TTTAGGGCCCGAGGAATAGCATGAAGTAATGAAGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTTCACTTGTAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR TCA 90 bp | CCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTGCACGGCAAAGCAGACACATACATTaGGCACATTTTGCTGTAATT | + |
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Preference number: 2 (lower is better) Translates to: PPSQVSHNINCRNSRARQSRHIH*AHFAVI Trigger: AATTACAGCAAAATGTGCTCAATGTATGTGTCTGCT...TTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCTCTCTCGGAACAGCATaGTACAACTATCTGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSSLGTA*YNYLKT Trigger: TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGA...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAACTAGTTGGAAACTTACAACGTCTCCTCCCACATaGCACTGTCACAGAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SPNESSIGLALLTSWKLTTSPPT*HCHRAV Trigger: AACTGCTCTGTGACAGTGGCATGTGGGAGGAGACGT...TGTAAGTTTCCAACTAGTTAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR-3UTR GCA 90 bp | GAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACTTCTTTCAGAGGGCATaGAAGTTGCCGGAGATTACA | + |
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Preference number: 2 (lower is better) Translates to: EQSCTAKCKFYAFHSTENFFQRA*KLPEIT Trigger: TGTAATCTCCGGCAACTTGCATGCCCTCTGAAAGAA...GTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACGACTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTTACAAGTGAAAACCCAGAGCCACACACACACACACACACACACACACACCACTACATGGACTGCTaGAATAATTCCTTTCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: GVTSENPEPHTHTHTHTHHYMDC*NNSFQS Trigger: ACTTTGAAAGGAATTATTCCAGCAGTCCATGTAGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTTCACTTGTAACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR CAA 90 bp | CTTACTGGCAAACACATCTCCCAGTGTTGTGAGCAGACACATACATaGAGCACATTTTGCTGTAATTCCATCTATTTGCAATGCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LTGKHISQCCEQTHT*STFCCNSIYLQCLH Trigger: GTGCAGGCATTGCAAATAGATGGAATTACAGCAAAATGTGCTCAATGTATGTGTCTGCTCACAACACTGGGAGATGTGTTTGCCAGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR-3UTR CCA 90 bp | TATCTTTTCAGTAACAAAACAAGGGCAGGAGATGGGAAACAAGATGGTTCGTGTCTTCTTTGTTGGGGGTaGGAAGGAACTTCAGTTACC | + |
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Preference number: 2 (lower is better) Translates to: YLFSNKTRAGDGKQDGSCLLCWG*EGTSVT Trigger: GGTAACTGAAGTTCCTTCCCACCCCCAACAAAGAAG...ACACGAACCATCTTGTTTCCCATCTCCTGCCCTTGTTTTGTTACTGAAAAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR-3UTR TCA 90 bp | AAACGAATAAAGTTCATTAGGTACAACTGTTTGTTTCAAGCTGTAGACATCTGCCATGCTACAACTATCTaGAGACAGGCTACCGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KRIKFIRYNCLFQAVDICHATTI*RQATAS Trigger: GCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATG...GCAGATGTCTACAGCTTGAAACAAACAGTTGTACCTAATGAACTTTATTCGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR-3UTR GCA 90 bp | AAACGAATAAAGTTCATTAGGTACAACTGTTTGTTTCAAGCTGTAGACATCTGCACACATACAGGTCTCTaGTATTCTCTCGGAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: KRIKFIRYNCLFQAVDICTHTGL*YSLGTA Trigger: TGCTGTTCCGAGAGAATAGCAGAGACCTGTATGTGT...GCAGATGTCTACAGCTTGAAACAAACAGTTGTACCTAATGAACTTTATTCGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTTCTCTCGGAACAGCATaGTACAACTATCTGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: QSKENKTNIKGGWKGITSSLGTA*YNYLKT Trigger: TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGA...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| 3UTR CCA 72 bp | CCACAGTGGCAATGCCATTCTCGCATGCTCAGCAGATaGGCCAACCACACACCCTACATACCTTGGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: PQWQCHSRMLSR*ANHTPYIPWLL Trigger: GAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCATCTGCTGAGCATGCGAGAATGGCATTGCCACTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR GCA 72 bp | AACGTCTCTTCCCACAGTGGCAATGCCATTCTCGCATaGTCAGCAGATGGGCCAACCACACACCCTACATAC | + |
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Preference number: 3 (lower is better) Translates to: NVSSHSGNAILA*SADGPTTHPTY Trigger: GTATGTAGGGTGTGTGGTTGGCCCATCTGCTGAGCATGCGAGAATGGCATTGCCACTGTGGGAAGAGACGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR CCA 72 bp | GGAGAAGTCCCCTTTCTCTCTACATCCTCGCTGAGGTaGTTTATGGCAGCTTCTGTCACAGAGAGACCACGC | + |
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Preference number: 3 (lower is better) Translates to: GEVPFLSTSSLR*FMAASVTERPR Trigger: GCGTGGTCTCTCTGTGACAGAAGCTGCCATAAACCACCTCAGCGAGGATGTAGAGAGAAAGGGGACTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR TCA 72 bp | TGGGAAGGAACTTCAGTTACCCATCAACTAAGAAAGTaGACCAGCTGCACGTCTCCTCCCACATGCCACTGT | + |
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Preference number: 3 (lower is better) Translates to: WEGTSVTHQLRK*TSCTSPPTCHC Trigger: ACAGTGGCATGTGGGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR TCA 72 bp | CTCATGGATTCCTCTCAGTCTAGCAAAAACAGGATCTaGGGACTCCTCTGTGTAGGGCAGAAACCTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: LMDSSQSSKNRI*GLLCVGQKPGG Trigger: ACCACCAGGTTTCTGCCCTACACAGAGGAGTCCTCAGATCCTGTTTTTGCTAGACTGAGAGGAATCCATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR GCA 72 bp | CAAAGACCACCCTCCCAGGTTTCACACAATATCAATTaGAGGAACAGTCGTGCACGGCAAAGTGTAAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: QRPPSQVSHNIN*RNSRARQSVSS Trigger: AGAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR CCA 72 bp | CAGGATCTGAGGACTCCTCTGTGTAGGGCAGAAACCTaGTGGTTAAATCTGTTAACCCATACCCAAATTAGG | + |
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Preference number: 3 (lower is better) Translates to: QDLRTPLCRAET*WLNLLTHTQIR Trigger: CCTAATTTGGGTATGGGTTAACAGATTTAACCACCAGGTTTCTGCCCTACACAGAGGAGTCCTCAGATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR-3UTR CAA 90 bp | GAACACCCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTGTAATTCCATCTATTaGCAATGCCTGCACAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: EHPKTTLPGFTQYQLQEQCNSIY*QCLHSV Trigger: GACACTGTGCAGGCATTGCAAATAGATGGAATTACA...CTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGGGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| 3UTR CCA 72 bp | ATAGAATCCACTTCAGTCCTGCCAGATAGCACCTCATaGATTCCTCTCAGTCTAGCAAAAACAGGATCTGAG | + |
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Preference number: 3 (lower is better) Translates to: IESTSVLPDSTS*IPLSLAKTGSE Trigger: CTCAGATCCTGTTTTTGCTAGACTGAGAGGAATCCATGAGGTGCTATCTGGCAGGACTGAAGTGGATTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR GCA 72 bp | ATTAGGTACAACTGTTTGTTTCAAGCTGTAGACATCTaGCAGGCAGAGGAAGCATATCCTTCCATACCCTAC | + |
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Preference number: 3 (lower is better) Translates to: IRYNCLFQAVDI*QAEEAYPSIPY Trigger: GTAGGGTATGGAAGGATATGCTTCCTCTGCCTGGCAGATGTCTACAGCTTGAAACAAACAGTTGTACCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR CCA 72 bp | CATACCTTGGCTTCTCCTCTAAAAGTGCTAATAATTTaGGGCCATGTTCTCTTCAAGGATAAGAGCCCTACC | + |
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Preference number: 3 (lower is better) Translates to: HTLASPLKVLII*GHVLFKDKSPT Trigger: GGTAGGGCTCTTATCCTTGAAGAGAACATGGCCCCAAATTATTAGCACTTTTAGAGGAGAAGCCAAGGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| 3UTR CCA 72 bp | GATCTGAGGACTCCTCTGTGTAGGGCAGAAACCTGGTaGTTAAATCTGTTAACCCATACCCAAATTAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: DLRTPLCRAETW*LNLLTHTQIRN Trigger: ATTCCTAATTTGGGTATGGGTTAACAGATTTAACCACCAGGTTTCTGCCCTACACAGAGGAGTCCTCAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| 3UTR GCA 72 bp | CAGTGTTGTGAGCAGACACATACATTGAGCACATTTTaGTGTAATTCCATCTATTTGCAATGCCTGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: QCCEQTHTLSTF*CNSIYLQCLHS Trigger: ACTGTGCAGGCATTGCAAATAGATGGAATTACAGCAAAATGTGCTCAATGTATGTGTCTGCTCACAACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| 3UTR CCA 72 bp | GAATTAAGAGCAGCAAGATCATCCAAGAACACTACATaGACTGCTGGAATAATTCCTTTCAAAGTCAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: ELRAARSSKNTT*TAGIIPFKVKP Trigger: GGGTTTGACTTTGAAAGGAATTATTCCAGCAGTCCATGTAGTGTTCTTGGATGATCTTGCTGCTCTTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| 3UTR CCA 72 bp | AATGAGAGCTCTATCGGTTTAGCACTGTTAACTAGTTaGAAACTTACACTCCCAATCTCTTTTCTAAACATC | + |
|
Preference number: 3 (lower is better) Translates to: NESSIGLALLTS*KLTLPISFLNI Trigger: GATGTTTAGAAAAGAGATTGGGAGTGTAAGTTTCCAACTAGTTAACAGTGCTAAACCGATAGAGCTCTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| 3UTR CCA 72 bp | ATTAAAACAACAACAACAACAACAACAACAACAATCTaGCCCAATCTTTCTAGCTATATCCCCATCCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: IKTTTTTTTTTI*PNLSSYIPIPK Trigger: CTTAGGGATGGGGATATAGCTAGAAAGATTGGGCCAGATTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CCA 90 bp | CCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCACAGCTCGAGGCGGTGGCAGCTaGGGGAGCCGCCCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHYSEGAPGRHGVRAGTARGGGS*GSRPTL Trigger: AAGGGTGGGGCGGCTCCCCCAGCTGCCACCGCCTCG...AGCTGTGCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | CCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCACAGCTGGGCCGCGGCCGCCTTaGACACTGCGGATCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PHYSEGAPGRHGVRAGTAGPRPP*TLRISW Trigger: CCATGAGATCCGCAGTGTTCAAGGCGGCCGCGGCCC...AGCTGTGCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | GGTGAAACCTACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGATGGGCAGCACCGCCTaGTACTTGGGCCGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GETYYTHTIQKAHQGGTGMGSTA*YLGRGL Trigger: CAGCCCCCGGCCCAAGTATCAGGCGGTGCTGCCCAT...CCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGTAGGTTTCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | CCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCACAGCTTCCACTCCGGCCACATaGGAAAGGCTTGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHYSEGAPGRHGVRAGTASTPAT*ERLGRQ Trigger: CTGCCTTCCAAGCCTTTCTCATGTGGCCGGAGTGGA...AGCTGTGCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGAAAACCCTTCTTTCAGAGGGCATGCAAGTTGCCGGAGATTACACCCCCGCAGCCAGCGCCGGCTaGGACTGGCTCCCCGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQKTLLSEGMQVAGDYTPAASAG*DWLPAD Trigger: ATCGGCGGGGAGCCAGTCGCAGCCGGCGCTGGCTGC...GGGGGTGTAATCTCCGGCAACTTGCATGCCCTCTGAAAGAAGGGTTTTCTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAAACCTACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCCATCTGCCCTCACTaGCCGCCAGGGTCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GETYYTHTIQKAHQGGTGSICPH*PPGSQQ Trigger: CTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGA...CCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGTAGGTTTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | TATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCACAGCTCCTACATCCACTCCGGCCACATaGGAAAGGCTTGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSEGAPGRHGVRAGTAPTSTPAT*ERLGRQ Trigger: CTGCCTTCCAAGCCTTTCTCATGTGGCCGGAGTGGA...TGTAGGAGCTGTGCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCACAGCTTCCTTGAGCTTACGATaGCGGGGGAGGAAATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHYSEGAPGRHGVRAGTASLSLR*RGRKWA Trigger: AGCCCATTTCCTCCCCCGGCATCGTAAGCTCAAGGA...AGCTGTGCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCTCCTTCTCCTTGGCCTaGAACTGCTGCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHPHYSEGAPGRHGVRAGSFSLA*NCCCCC Trigger: ACAGCAGCAGCAGCAGTTGCAGGCCAAGGAGAAGGA...GCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | GGTGAAACCTACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGGCAGAAGGATCTGTTTaGGGCAGGCGGCCTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GETYYTHTIQKAHQGGTGAEGSV*GRRPDW Trigger: CCAGTCAGGCCGCCTGCCTCAAACAGATCCTTCTGC...CCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGTAGGTTTCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CCACCCCAAATCTCTACCTCACCACCAAAAGTTTGGCTAATAGGATCAAGCCCCGCAGCCAGCGCCGGCTaGGACTGGCTCCCCGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPQISTSPPKVWLIGSSPAASAG*DWLPAD Trigger: ATCGGCGGGGAGCCAGTCGCAGCCGGCGCTGGCTGC...GGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGGTAGAGATTTGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | TATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCACAGCTCCTACATTGGCCTGCAACTGCTaGTGCTGCTGTTCGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSEGAPGRHGVRAGTAPTLACNC*CCCSMR Trigger: CCTCATCGAACAGCAGCAGCAGCAGTTGCAGGCCAA...TGTAGGAGCTGTGCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTGCCGAGGCGGTGGCAGCTaGGGGAGCCGCCCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKTTLPGFTQYQLQEQSCRGGGS*GSRPTL Trigger: AAGGGTGGGGCGGCTCCCCCAGCTGCCACCGCCTCG...GCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTATTCCTCGGGCCCTAAAGTTCACGGTGAAACCTACTACACCCACACTACGAGGCGGTGGCAGCTaGGGGAGCCGCCCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HAIPRALKFTVKPTTPTLRGGGS*GSRPTL Trigger: AAGGGTGGGGCGGCTCCCCCAGCTGCCACCGCCTCG...TAGTGTGGGTGTAGTAGGTTTCACCGTGAACTTTAGGGCCCGAGGAATAGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCCACATGTGCCGGGGGAGGAAATaGGCTTCGGCCGCCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSYPSTKKVNQLHVSSHMCRGRK*ASAAPD Trigger: GTCCGGGGCGGCCGAAGCCCATTTCCTCCCCCGGCA...CATGTGGGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | ACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAGGGCCGCGGCCGCCTTaGACACTGCGGATCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TDSGMPSPNESSIGLALLGPRPP*TLRISW Trigger: CCATGAGATCCGCAGTGTTCAAGGCGGCCGCGGCCC...TAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACATGGGCAGCACCGCCTaGTACTTGGGCCGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGKALPVNDNRHEGTGHMGSTA*YLGRGL Trigger: CAGCCCCCGGCCCAAGTATCAGGCGGTGCTGCCCAT...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | GGTGAAACCTACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGGCTGCTGCTGTTCGATaGGGTCCAATTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GETYYTHTIQKAHQGGTGAAAVR*GPIAAE Trigger: TTCTGCTGCAATTGGACCTCATCGAACAGCAGCAGC...CCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGTAGGTTTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | TATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGCACAGCTCCTACAAGGAACAGCCAAGACTaGAGTTTCTCCTGCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: YSEGAPGRHGVRAGTAPTRNSQD*SFSCNT Trigger: AGTGTTGCAGGAGAAACTTCAGTCTTGGCTGTTCCT...TGTAGGAGCTGTGCCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | AATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCTATTCTCTCAGCTCTCTTCCTGCTaGCCGGGGGCCGCCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDNRHEGTGHTYRSLLFSQLSSC*PGAAPA Trigger: AGCCGGGGCGGCCCCCGGGCAGCAGGAAGAGAGCTG...AGAGAATAGCAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAGCACCGCCTGATACTTaGGCCGGGGGCTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDSGMPSPNESSIGLALLAPPDT*AGGCSQ Trigger: CTGGCTGCAGCCCCCGGCCCAAGTATCAGGCGGTGC...TAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGGTTTCATCCATCTGCCCTCACTaGCCGCCAGGGTCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKLPLAPENTQRPPSQVSSICPH*PPGSQQ Trigger: CTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGA...TGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR TCA 90 bp | ACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGTGTTCCCTGATCCTCTaGATATCCCATCGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTPTLFRRRTREARGQGRCSLIL*ISHRFL Trigger: GAGAAAACGATGGGATATTCAGAGGATCAGGGAACA...CCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATATCAATTGCAGGAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCACAGCTCTCTTCCTGCTaGCCGGGGGCCGCCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQYQLQEQSCTAKCKFYAQLSSC*PGAAPA Trigger: AGCCGGGGCGGCCCCCGGGCAGCAGGAAGAGAGCTG...TGCATAGAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACATGCCGGGGGAGGAAATaGGCTTCGGCCGCCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HTGLCYSLGTACYNYLKTCRGRK*ASAAPD Trigger: GTCCGGGGCGGCCGAAGCCCATTTCCTCCCCCGGCA...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCTCCATCTGCCCTCACTaGCCGCCAGGGTCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSSICPH*PPGSQQ Trigger: CTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGA...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| 3UTR CAA 72 bp | ACGGGGTCAGGGCAGGCACAGCTCCTACAGGAAGGGTaGCTCCATCTTAGACACGCTAATGAAGAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSGQAQLLQEG*LHLRHANEEPF Trigger: AAAGGGCTCTTCATTAGCGTGTCTAAGATGGAGCAACCCTTCCTGTAGGAGCTGTGCCTGCCCTGACCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | CGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACCCTTCTTATGGGCAGCACCGCCTaGTACTTGGGCCGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RARQSVSSMHFTAQKTLLMGSTA*YLGRGL Trigger: CAGCCCCCGGCCCAAGTATCAGGCGGTGCTGCCCAT...AAGAAGGGTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGGTTTCAGCAGAAGGATCTGTTTaGGGCAGGCGGCCTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLPLAPENTQRPPSQVSAEGSV*GRRPDW Trigger: CCAGTCAGGCCGCCTGCCTCAAACAGATCCTTCTGC...TGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR GCA 90 bp | AAACCTACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGCAATGGCCGTCCAAATaGTACAACAGGCAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPTTPTLFRRRTREARGQQWPSK*YNRQEG Trigger: CCCTTCTTGCCTGTTGTAGCATTTGGACGGCCATTG...CTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGTAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCTCCTCAGCATCCCCAAACCAAAGGACATCTAGGAGAGGACATAACCTCTGGATCTCCAACCTaGAACGGCTTCGCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPPQHPQTKGHLGEDITSGSPT*NGFAHP Trigger: TGGATGAGCGAAGCCGTTGCAGGTTGGAGATCCAGA...GGTTATGTCCTCTCCTAGATGTCCTTTGGTTTGGGGATGCTGAGGAGGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | CCCAACCAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGTCCTTGAGCTTACGATaGCGGGGGAGGAAATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNQKLPLAPENTQRPPSQSLSLR*RGRKWA Trigger: AGCCCATTTCCTCCCCCGGCATCGTAAGCTCAAGGA...CTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTGGTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAAACCTGGTGGTTAAATCTGTTAACCCATACCCAAATTAGGAATCTGACAGCAGCCAGCGCCGGCTaGGACTGGCTCCCCGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AETWWLNLLTHTQIRNLTAASAG*DWLPAD Trigger: ATCGGCGGGGAGCCAGTCGCAGCCGGCGCTGGCTGC...TGTCAGATTCCTAATTTGGGTATGGGTTAACAGATTTAACCACCAGGTTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAATGCCATTCTCGCATGCTCAGCAGATGGGCCAACCACACACCCTACATATCCTTGGCCTGCAACTaGTGCTGCTGCTGTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: WQCHSRMLSRWANHTPYISLACN*CCCCSM Trigger: CATCGAACAGCAGCAGCAGCAGTTGCAGGCCAAGGA...TATGTAGGGTGTGTGGTTGGCCCATCTGCTGAGCATGCGAGAATGGCATTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | CCCAACCAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGTCCTTCTCCTTGGCCTaGAACTGCTGCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNQKLPLAPENTQRPPSQSFSLA*NCCCCC Trigger: ACAGCAGCAGCAGCAGTTGCAGGCCAAGGAGAAGGA...CTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTGGTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | ACACAATATCAATTGCAGGAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCATGCCGGGGGAGGAAATaGGCTTCGGCCGCCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TQYQLQEQSCTAKCKFYACRGRK*ASAAPD Trigger: GTCCGGGGCGGCCGAAGCCCATTTCCTCCCCCGGCA...TGCATAGAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCAAATCTCTACCTCACCACCAAAAGTTTGGCTAATAGGATCAAGCCCCGGCTTGTTTAGTAGCTaGGGGCGGACAGGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQISTSPPKVWLIGSSPGLFSS*GRTGQG Trigger: CCCTTGCCCTGTCCGCCCCCAGCTACTAAACAAGCC...GGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGGTAGAGATTTGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGGTTTCAGGCTTGTTTAGTAGCTaGGGGCGGACAGGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLPLAPENTQRPPSQVSGLFSS*GRTGQG Trigger: CCCTTGCCCTGTCCGCCCCCAGCTACTAAACAAGCC...TGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACCCTTCTTGCACCGCCTGATACTTaGGCCGGGGGCTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RARQSVSSMHFTAQKTLLAPPDT*AGGCSQ Trigger: CTGGCTGCAGCCCCCGGCCCAAGTATCAGGCGGTGC...AAGAAGGGTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGGTTTCATCCACTCCGGCCACATaGGAAAGGCTTGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKLPLAPENTQRPPSQVSSTPAT*ERLGRQ Trigger: CTGCCTTCCAAGCCTTTCTCATGTGGCCGGAGTGGA...TGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR TCA 90 bp | ATCTCCCAGTGTTGTGAGCAGACACATACATTGAGCACATTTTGCTGTAATTCCGGGCCGCGGCCGCCTTaGACACTGCGGATCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISQCCEQTHTLSTFCCNSGPRPP*TLRISW Trigger: CCATGAGATCCGCAGTGTTCAAGGCGGCCGCGGCCC...GGAATTACAGCAAAATGTGCTCAATGTATGTGTCTGCTCACAACACTGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR TCA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCGCAGAAGGATCTGTTTaGGGCAGGCGGCCTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSAEGSV*GRRPDW Trigger: CCAGTCAGGCCGCCTGCCTCAAACAGATCCTTCTGC...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | TGGCAATGCCATTCTCGCATGCTCAGCAGATGGGCCAACCACACACCCTACATAGCTGCTGCTGTTCGATaGGGTCCAATTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WQCHSRMLSRWANHTPYIAAAVR*GPIAAE Trigger: TTCTGCTGCAATTGGACCTCATCGAACAGCAGCAGC...TATGTAGGGTGTGTGGTTGGCCCATCTGCTGAGCATGCGAGAATGGCATTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | GCACAGAAAACCCTTCTTTCAGAGGGCATGCAAGTTGCCGGAGATTACACCCCCTCCCTCTTCACCAGCTaGATCCGCCTTTCCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: AQKTLLSEGMQVAGDYTPSLFTS*IRLSIR Trigger: ACGTATGGAAAGGCGGATGCAGCTGGTGAAGAGGGA...GGGGGTGTAATCTCCGGCAACTTGCATGCCCTCTGAAAGAAGGGTTTTCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGTCTGGTGCTCTTGTGATGAGCAACTTACTGGCAAACACATCTCCCAGTCCTTGGCCTGCAACTaGTGCTGCTGCTGTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQVWCSCDEQLTGKHISQSLACN*CCCCSM Trigger: CATCGAACAGCAGCAGCAGCAGTTGCAGGCCAAGGA...CTGGGAGATGTGTTTGCCAGTAAGTTGCTCATCACAAGAGCACCAGACTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CCCAACCAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGAGACCGGGGCTTTTCTaGGGTTTCTTGGCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNQKLPLAPENTQRPPSQRPGLF*GFLAPQ Trigger: TTGAGGAGCCAAGAAACCCCAGAAAAGCCCCGGTCT...CTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTGGTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CATGACAGAGACATCTCTACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTGCTTTCTCCTTGGGGTaGGTGCTGGGTCCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDRDISTDSGMPSPNESSAFSLG*VLGPFW Trigger: CCAAAAGGGACCCAGCACCCACCCCAAGGAGAAAGC...AGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGTAGAGATGTCTCTGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | AAAACCCAGAGCCACACACACACACACACACACACACACACACACACACACACAAGAAGGCTTTCTCCTTaGGGTGGGTGCTGGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTQSHTHTHTHTHTHTHTRRLSP*GGCWVP Trigger: AGGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAGGCTTGTTTAGTAGCTaGGGGCGGACAGGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDSGMPSPNESSIGLALLGLFSS*GRTGQG Trigger: CCCTTGCCCTGTCCGCCCCCAGCTACTAAACAAGCC...TAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCTCCTCAGCATCCCCAAACCAAAGGACATCTAGGAGAGGACATAACCAGAGGCTCTACTGAGTaGTCCCTCCAAGAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PQPPQHPQTKGHLGEDITRGSTE*SLQEGT Trigger: TGTTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCT...GGTTATGTCCTCTCCTAGATGTCCTTTGGTTTGGGGATGCTGAGGAGGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR TCA 90 bp | CCACCCCAAATCTCTACCTCACCACCAAAAGTTTGGCTAATAGGATCAAGCCCCTTCCTACAGGTCCGGTaGGGTGTGTGCTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQISTSPPKVWLIGSSPFLQVR*GVCFFW Trigger: CCAGAAGAAGCACACACCTCACCGGACCTGTAGGAA...GGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGGTAGAGATTTGGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CCACCCCAAATCTCTACCTCACCACCAAAAGTTTGGCTAATAGGATCAAGCCCCTTGGCCTGCAACTGCTaGTGCTGCTGTTCGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQISTSPPKVWLIGSSPLACNC*CCCSMR Trigger: CCTCATCGAACAGCAGCAGCAGCAGTTGCAGGCCAA...GGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGGTAGAGATTTGGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CCAGTGAATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCTATTGGAAGGCAGAGCCTaGGAGGTCTCGCAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVNDNRHEGTGHTYRSLLLEGRA*EVSQSS Trigger: GGAGCTTTGCGAGACCTCCCAGGCTCTGCCTTCCAA...TAGCAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATTCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCCACATGAGAAGGCTTTCTCCTTaGGGTGGGTGCTGGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSYPSTKKVNQLHVSSHMRRLSP*GGCWVP Trigger: AGGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCT...CATGTGGGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCGGTGATGGGGGAGGCTaGTGCCAACGACACAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LCYSLGTACYNYLKTGYRGDGGG*CQRHKY Trigger: GTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACC...GCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTTCCTACAGGTCCGGTaGGGTGTGTGCTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGLCYSLGTACYNYLKTGFLQVR*GVCFFW Trigger: CCAGAAGAAGCACACACCTCACCGGACCTGTAGGAA...GCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | CCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTGCGCTGCTGCTGTTCGATaGGGTCCAATTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PKTTLPGFTQYQLQEQSCAAAVR*GPIAAE Trigger: TTCTGCTGCAATTGGACCTCATCGAACAGCAGCAGC...GCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTCAGCTCTCTTCCTGCTaGCCGGGGGCCGCCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSQLSSC*PGAAPA Trigger: AGCCGGGGCGGCCCCCGGGCAGCAGGAAGAGAGCTG...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTTTGGCCTGCAACTGCTaGTGCTGCTGTTCGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQRPPSQVSHNINCRNSRLACNC*CCCSMR Trigger: CCTCATCGAACAGCAGCAGCAGCAGTTGCAGGCCAA...ACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGAGAAGGCTTTCTCCTTaGGGTGGGTGCTGGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVNDNRHEGTGHTYRSLRRLSP*GGCWVP Trigger: AGGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCT...CAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAGGTGATGGGGGAGGCTaGTGCCAACGACACAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TDSGMPSPNESSIGLALLGDGGG*CQRHKY Trigger: GTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACC...TAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTGGTGATGGGGGAGGCTaGTGCCAACGACACAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TQRPPSQVSHNINCRNSRGDGGG*CQRHKY Trigger: GTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACC...ACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCAGCAGGTGTGTGCTTCTTCTaGATCTCCAACCTGCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSRNSMLQLSEDRLPPAGVCFF*ISNLQR Trigger: CCGTTGCAGGTTGGAGATCCAGAAGAAGCACACACC...TGCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACATCCACTCCGGCCACATaGGAAAGGCTTGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTGLCYSLGTACYNYLKTSTPAT*ERLGRQ Trigger: CTGCCTTCCAAGCCTTTCTCATGTGGCCGGAGTGGA...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | CCACCCCAAATCTCTACCTCACCACCAAAAGTTTGGCTAATAGGATCAAGCCCCTTCTCCTGCAACACTTaGTGGCATCAGACACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPQISTSPPKVWLIGSSPFSCNT*WHQTPC Trigger: GCAAGGTGTCTGATGCCATCAAGTGTTGCAGGAGAA...GGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGGTAGAGATTTGGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTCCCTCTTCACCAGCTaGATCCGCCTTTCCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLCYSLGTACYNYLKTGSLFTS*IRLSIR Trigger: ACGTATGGAAAGGCGGATGCAGCTGGTGAAGAGGGA...GCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCAATGGCCGTCCAAATaGTACAACAGGCAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCYSLGTACYNYLKTGYRQWPSK*YNRQEG Trigger: CCCTTCTTGCCTGTTGTAGCATTTGGACGGCCATTG...GCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CCAGTGAATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCTATCTGGATCTCCAACCTaGAACGGCTTCGCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVNDNRHEGTGHTYRSLLSGSPT*NGFAHP Trigger: TGGATGAGCGAAGCCGTTGCAGGTTGGAGATCCAGA...TAGCAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATTCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACAGACCGGGGCTTTTCTaGGGTTTCTTGGCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EDGKALPVNDNRHEGTGHRPGLF*GFLAPQ Trigger: TTGAGGAGCCAAGAAACCCCAGAAAAGCCCCGGTCT...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCAGACCGGGGCTTTTCTaGGGTTTCTTGGCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGLCYSLGTACYNYLKTGRPGLF*GFLAPQ Trigger: TTGAGGAGCCAAGAAACCCCAGAAAAGCCCCGGTCT...GCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCAGACCGGGGCTTTTCTaGGGTTTCTTGGCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSRPGLF*GFLAPQ Trigger: TTGAGGAGCCAAGAAACCCCAGAAAAGCCCCGGTCT...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGCTTTCTCCTTGGGGTaGGTGCTGGGTCCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTGLCYSLGTACYNYLKTAFSLG*VLGPFW Trigger: CCAAAAGGGACCCAGCACCCACCCCAAGGAGAAAGC...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | GAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACGCTTTCTCCTTGGGGTaGGTGCTGGGTCCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSCTAKCKFYAFHSTENAFSLG*VLGPFW Trigger: CCAAAAGGGACCCAGCACCCACCCCAAGGAGAAAGC...GTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACGACTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAGGTGTGTGCTTCTTCTaGATCTCCAACCTGCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: TDSGMPSPNESSIGLALLGVCFF*ISNLQR Trigger: CCGTTGCAGGTTGGAGATCCAGAAGAAGCACACACC...TAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCCTATCTCCTTCTCCTTaGCCTGCAACTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLCYSLGTACYNYLKTGLSPSP*PATAAA Trigger: AGCAGCAGCAGTTGCAGGCCAAGGAGAAGGAGATAG...GCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTCTATCTCCTTCTCCTTaGCCTGCAACTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQRPPSQVSHNINCRNSRLSPSP*PATAAA Trigger: AGCAGCAGCAGTTGCAGGCCAAGGAGAAGGAGATAG...ACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| 3UTR CAA 72 bp | GCTCAGCAGATGGGCCAACCACACACCCTACATACCTaGGCTTCTCCTCTAAAAGTGCTAATAATTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQQMGQPHTLHT*ASPLKVLIIWG Trigger: GCCCCAAATTATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCATCTGCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCAACCACACACCCTACATACCTTGGCTTCTCCTCTAAAAGTGCTAATACCCTGGAGCAGCTTGTaGCTTTCCTTCTCGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: MGQPHTLHTLASPLKVLIPWSSL*LSFSLS Trigger: GGATAACGAGAAGGAAAGGCACAAGCTGCTCCAGGG...TATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCGATGGGGGAGGCTGGTaGCAACGACACAAATACATT | + |
|
Preference number: 4 (lower is better) Translates to: TGLCYSLGTACYNYLKTGDGGGW*QRHKYI Trigger: AATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATC...GCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | AATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCTATTCTCTTCCTTGGCCTGCAACTaGTGCTGCTGCTGTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NDNRHEGTGHTYRSLLFSSLACN*CCCCSM Trigger: CATCGAACAGCAGCAGCAGCAGTTGCAGGCCAAGGA...AGAGAATAGCAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCCCAGTGTTGTGAGCAGACACATACATTGAGCACATTTTGCTGTAATTCCAGAAGGCTTTCTCCTTaGGGTGGGTGCTGGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISQCCEQTHTLSTFCCNSRRLSP*GGCWVP Trigger: AGGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCT...GGAATTACAGCAAAATGTGCTCAATGTATGTGTCTGCTCACAACACTGGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCAGAGGCTCTACTGAGTaGTCCCTCCAAGAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LCYSLGTACYNYLKTGYRRGSTE*SLQEGI Trigger: AATTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCT...GCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGCCAACCACACACCCTACATACCTTGGCTTCTCCTCTAAAAGTGCTAATAGGTGTGTGCTTCTTCTaGATCTCCAACCTGCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: MGQPHTLHTLASPLKVLIGVCFF*ISNLQR Trigger: CCGTTGCAGGTTGGAGATCCAGAAGAAGCACACACC...TATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTGCACCGCCTGATACTTaGGCCGGGGGCTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSAPPDT*AGGCSQ Trigger: CTGGCTGCAGCCCCCGGCCCAAGTATCAGGCGGTGC...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| 3UTR CAA 72 bp | CCAAAGACCACCCTCCCAGGTTTCACACAATATCAATaGCAGGAACAGTCGTGCACGGCAAAGTGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKTTLPGFTQYQ*QEQSCTAKCKF Trigger: GAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR TCA 90 bp | CTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCAGCATGTTCCCTGATCCTCTaGATATCCCATCGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSRNSMLQLSEDRLPPACSLIL*ISHRFL Trigger: GAGAAAACGATGGGATATTCAGAGGATCAGGGAACA...TGCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | TTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCAATGGCCGTCCAAATaGTACAACAGGCAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVNDNRHEGTGHTYRSLQWPSK*YNRQEG Trigger: CCCTTCTTGCCTGTTGTAGCATTTGGACGGCCATTG...CAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | TCACACAATATCAATTGCAGGAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGTTATACTCTTCCATCTaGCCTCACTGGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHNINCRNSRARQSVSSMLYSSI*PHWPPG Trigger: CCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAA...CATAGAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCCACATGTCGCAAAGCTCCGGCTaGCGCTCCAATTTAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSYPSTKKVNQLHVSSHMSQSSG*RSNLIF Trigger: GAAAATTAAATTGGAGCGCCAGCCGGAGCTTTGCGA...CATGTGGGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACTCGCAAAGCTCCGGCTaGCGCTCCAATTTAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDGKALPVNDNRHEGTGHSQSSG*RSNLIF Trigger: GAAAATTAAATTGGAGCGCCAGCCGGAGCTTTGCGA...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CCCAACCAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGAAACAGTTTCTGATATaGAACCACAGGGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNQKLPLAPENTQRPPSQKQFLI*NHRVPL Trigger: AAGAGGAACCCTGTGGTTCCATATCAGAAACTGTTT...CTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTGGTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR GCA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGATGGGGGAGGCTGGTaGCAACGACACAAATACATT | + |
|
Preference number: 4 (lower is better) Translates to: HTGLCYSLGTACYNYLKTDGGGW*QRHKYI Trigger: AATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATC...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | GAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACGATGGGGGAGGCTGGTaGCAACGACACAAATACATT | + |
|
Preference number: 4 (lower is better) Translates to: EQSCTAKCKFYAFHSTENDGGGW*QRHKYI Trigger: AATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATC...GTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACGACTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR GCA 90 bp | TATCTTTTCAGTAACAAAACAAGGGCAGGAGATGGGAAACAAGATGGTTCGTGTTCCTTGAGCTTACGATaGCGGGGGAGGAAATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLFSNKTRAGDGKQDGSCSLSLR*RGRKWA Trigger: AGCCCATTTCCTCCCCCGGCATCGTAAGCTCAAGGA...ACACGAACCATCTTGTTTCCCATCTCCTGCCCTTGTTTTGTTACTGAAAAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | TATCTTTTCAGTAACAAAACAAGGGCAGGAGATGGGAAACAAGATGGTTCGTGTTTATACTCTTCCATCTaGCCTCACTGGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLFSNKTRAGDGKQDGSCLYSSI*PHWPPG Trigger: CCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAA...ACACGAACCATCTTGTTTCCCATCTCCTGCCCTTGTTTTGTTACTGAAAAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAACTAGTTGGAAACTTACATTATACTCTTCCATCTaGCCTCACTGGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPNESSIGLALLTSWKLTLYSSI*PHWPPG Trigger: CCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAA...TGTAAGTTTCCAACTAGTTAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTCGATGAGGTCCAATTaGAGCAGAAGGATCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGLCYSLGTACYNYLKTGSMRSN*SRRICL Trigger: CAAACAGATCCTTCTGCTGCAATTGGACCTCATCGA...GCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | TTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGTCGCAAAGCTCCGGCTaGCGCTCCAATTTAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPVNDNRHEGTGHTYRSLSQSSG*RSNLIF Trigger: GAAAATTAAATTGGAGCGCCAGCCGGAGCTTTGCGA...CAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR TCA 90 bp | AAAACCCAGAGCCACACACACACACACACACACACACACACACACACACACACATTTACAAACAGTTTCTaGTATGGAACCACAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQSHTHTHTHTHTHTHTFTNSF*YGTTGF Trigger: GAACCCTGTGGTTCCATATCAGAAACTGTTTGTAAA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR TCA 90 bp | GGAGTTACAAGTGAAAACCCAGAGCCACACACACACACACACACACACACACACTTTTGCATGCCTCTTTaGAAATACACTGTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTSENPEPHTHTHTHTHFCMPL*KYTVIQ Trigger: CTGGATGACAGTGTATTTTCAAAGAGGCATGCAAAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTTCACTTGTAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR TCA 90 bp | CTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCAGCATTTTGCATGCCTCTTTaGAAATACACTGTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSRNSMLQLSEDRLPPAFCMPL*KYTVIQ Trigger: CTGGATGACAGTGTATTTTCAAAGAGGCATGCAAAA...TGCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | GCAGAAACCTGGTGGTTAAATCTGTTAACCCATACCCAAATTAGGAATCTGACATCCCTCTTCACCAGCTaGATCCGCCTTTCCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: AETWWLNLLTHTQIRNLTSLFTS*IRLSIR Trigger: ACGTATGGAAAGGCGGATGCAGCTGGTGAAGAGGGA...TGTCAGATTCCTAATTTGGGTATGGGTTAACAGATTTAACCACCAGGTTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAACTAGTTGGAAACTTACATCCCTCTTCACCAGCTaGATCCGCCTTTCCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: SPNESSIGLALLTSWKLTSLFTS*IRLSIR Trigger: ACGTATGGAAAGGCGGATGCAGCTGGTGAAGAGGGA...TGTAAGTTTCCAACTAGTTAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACCCTTCTTTCGCAAAGCTCCGGCTaGCGCTCCAATTTAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RARQSVSSMHFTAQKTLLSQSSG*RSNLIF Trigger: GAAAATTAAATTGGAGCGCCAGCCGGAGCTTTGCGA...AAGAAGGGTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR CCA 90 bp | CCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTGCACGGCAATTCTGTATTTCCAAATaGGGTTTTCCTTTTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSQVSHNINCRNSRARQFCISK*GFPFVS Trigger: GGACACAAAAGGAAAACCCCATTTGGAAATACAGAA...TTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR CCA 90 bp | AAAACCCAGAGCCACACACACACACACACACACACACACACACACACACACACAAAACAGTTTCTGATATaGAACCACAGGGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTQSHTHTHTHTHTHTHTKQFLI*NHRVPL Trigger: AAGAGGAACCCTGTGGTTCCATATCAGAAACTGTTT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCCAAATCTCTACCTCACCACCAAAAGTTTGGCTAATAGGATCAAGCCCCAAACAGTTTCTGATATaGAACCACAGGGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPQISTSPPKVWLIGSSPKQFLI*NHRVPL Trigger: AAGAGGAACCCTGTGGTTCCATATCAGAAACTGTTT...GGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGGTAGAGATTTGGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGTCTGGTGCTCTTGTGATGAGCAACTTACTGGCAAACACATCTCCCAGACAAATACATTTCTGTaGTGGAAAGGTACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQVWCSCDEQLTGKHISQTNTFL*WKGTAN Trigger: ATTTGCCGTACCTTTCCACCACAGAAATGTATTTGT...CTGGGAGATGTGTTTGCCAGTAAGTTGCTCATCACAAGAGCACCAGACTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR TCA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACATGTTCCCTGATCCTCTaGATATCCCATCGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTGLCYSLGTACYNYLKTCSLIL*ISHRFL Trigger: GAGAAAACGATGGGATATTCAGAGGATCAGGGAACA...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTTGGCCTCATTAAAACAACAACAACAACAACAACAACAACAATCTGGCCCGATGGGGGAGGCTGGTaGCAACGACACAAATACATT | + |
|
Preference number: 4 (lower is better) Translates to: TVGLIKTTTTTTTTTIWPDGGGW*QRHKYI Trigger: AATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATC...GGGCCAGATTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTAATGAGGCCAACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACAGCTCCAGTTTTGCATaGCTCTTTGAAAATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGKALPVNDNRHEGTGHSSSFA*LFENTL Trigger: CAGTGTATTTTCAAAGAGGCATGCAAAACTGGAGCT...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS-3UTR CCA 90 bp | CTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCTTCTGTATTTCCAAATaGGGTTTTCCTTTTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCYSLGTACYNYLKTGYRFCISK*GFPFVS Trigger: GGACACAAAAGGAAAACCCCATTTGGAAATACAGAA...GCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTGCTTTCTCCTTGGGGTaGGTGCTGGGTCCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSAFSLG*VLGPFW Trigger: CCAAAAGGGACCCAGCACCCACCCCAAGGAGAAAGC...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCAATACATTTCTGTGGTaGAAAGGTACGGCAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCYSLGTACYNYLKTGYRNTFLW*KGTANL Trigger: AAGATTTGCCGTACCTTTCCACCACAGAAATGTATT...GCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGGTTTCAAATACATTTCTGTGGTaGAAAGGTACGGCAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLPLAPENTQRPPSQVSNTFLW*KGTANL Trigger: AAGATTTGCCGTACCTTTCCACCACAGAAATGTATT...TGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTTTCCTACAGGTCCGGTaGGGTGTGTGCTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSFLQVR*GVCFFW Trigger: CCAGAAGAAGCACACACCTCACCGGACCTGTAGGAA...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCAACCACACACCCTACATACCTTGGCTTCTCCTCTAAAAGTGCTAATAAGCTCCAGTTTTGCATaGCTCTTTGAAAATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: MGQPHTLHTLASPLKVLISSSFA*LFENTL Trigger: CAGTGTATTTTCAAAGAGGCATGCAAAACTGGAGCT...TATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR GCA 90 bp | ACACAATATCAATTGCAGGAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGCATCGATGAGGTCCAATTaGAGCAGAAGGATCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TQYQLQEQSCTAKCKFYASMRSN*SRRICL Trigger: CAAACAGATCCTTCTGCTGCAATTGGACCTCATCGA...TGCATAGAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR GCA 90 bp | AAACGAATAAAGTTCATTAGGTACAACTGTTTGTTTCAAGCTGTAGACATCTGCTCCTTCTCCTTGGCCTaGAACTGCTGCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRIKFIRYNCLFQAVDICSFSLA*NCCCCC Trigger: ACAGCAGCAGCAGCAGTTGCAGGCCAAGGAGAAGGA...GCAGATGTCTACAGCTTGAAACAAACAGTTGTACCTAATGAACTTTATTCGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTTCTGTATTTCCAAATaGGGTTTTCCTTTTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGLCYSLGTACYNYLKTGFCISK*GFPFVS Trigger: GGACACAAAAGGAAAACCCCATTTGGAAATACAGAA...GCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | CCAGTGAATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCTAAATACATTTCTGTGGTaGAAAGGTACGGCAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVNDNRHEGTGHTYRSLLNTFLW*KGTANL Trigger: AAGATTTGCCGTACCTTTCCACCACAGAAATGTATT...TAGCAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATTCACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CCA 90 bp | TATCTTTTCAGTAACAAAACAAGGGCAGGAGATGGGAAACAAGATGGTTCGTGTAGAGGCTCTACTGAGTaGTCCCTCCAAGAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: YLFSNKTRAGDGKQDGSCRGSTE*SLQEGI Trigger: AATTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCT...ACACGAACCATCTTGTTTCCCATCTCCTGCCCTTGTTTTGTTACTGAAAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107487.10 |
||
| 3UTR CAA 72 bp | GTTTGGCTAATAGGATCAAGCCCCACTAAGGAATCCTaGAAAAGTGACATGACAGAGACATCTCTACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VWLIGSSPTKES*KSDMTETSLQT Trigger: AGTCTGTAGAGATGTCTCTGTCATGTCACTTTTCAAGGATTCCTTAGTGGGGCTTGATCCTATTAGCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAAGCTCCAGTTTTGCATaGCTCTTTGAAAATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HTGLCYSLGTACYNYLKTSSSFA*LFENTL Trigger: CAGTGTATTTTCAAAGAGGCATGCAAAACTGGAGCT...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTTCTGGATCTCCAACCTaGAACGGCTTCGCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSSGSPT*NGFAHP Trigger: TGGATGAGCGAAGCCGTTGCAGGTTGGAGATCCAGA...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR GCA 90 bp | TACCTTGGCTTCTCCTCTAAAAGTGCTAATAATTTGGGGCCATGTTCTCTTCAATCGATGAGGTCCAATTaGAGCAGAAGGATCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLGFSSKSANNLGPCSLQSMRSN*SRRICL Trigger: CAAACAGATCCTTCTGCTGCAATTGGACCTCATCGA...TTGAAGAGAACATGGCCCCAAATTATTAGCACTTTTAGAGGAGAAGCCAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTCTATCTCCTTCTCCTTaGCCTGCAACTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSLSPSP*PATAAA Trigger: AGCAGCAGCAGTTGCAGGCCAAGGAGAAGGAGATAG...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CCA 90 bp | AATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCTATTCTCTTTCTGTATTTCCAAATaGGGTTTTCCTTTTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDNRHEGTGHTYRSLLFSFCISK*GFPFVS Trigger: GGACACAAAAGGAAAACCCCATTTGGAAATACAGAA...AGAGAATAGCAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS-3UTR CCA 90 bp | TCATTACTTCATGCTATTCCTCGGGCCCTAAAGTTCACGGTGAAACCTACTACAAATACATTTCTGTGGTaGAAAGGTACGGCAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLHAIPRALKFTVKPTTNTFLW*KGTANL Trigger: AAGATTTGCCGTACCTTTCCACCACAGAAATGTATT...TGTAGTAGGTTTCACCGTGAACTTTAGGGCCCGAGGAATAGCATGAAGTAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CCA 90 bp | AATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGCTATTCTCTACAAATACATTTCTGTaGTGGAAAGGTACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NDNRHEGTGHTYRSLLFSTNTFL*WKGTAN Trigger: ATTTGCCGTACCTTTCCACCACAGAAATGTATTTGT...AGAGAATAGCAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS-3UTR TCA 90 bp | TCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAACTAGTTGGAAACTTACATTTTGCATGCCTCTTTaGAAATACACTGTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPNESSIGLALLTSWKLTFCMPL*KYTVIQ Trigger: CTGGATGACAGTGTATTTTCAAAGAGGCATGCAAAA...TGTAAGTTTCCAACTAGTTAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CCA 90 bp | TCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAACTAGTTGGAAACTTACAACAAATACATTTCTGTaGTGGAAAGGTACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPNESSIGLALLTSWKLTTNTFL*WKGTAN Trigger: ATTTGCCGTACCTTTCCACCACAGAAATGTATTTGT...TGTAAGTTTCCAACTAGTTAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| 3UTR CAA 72 bp | AGAAACAACACAGGTCAGAGTAGGAGCACTAAACAGTaGGCCTCATTAAAACAACAACAACAACAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RNNTGQSRSTKQ*ASLKQQQQQQQ Trigger: TTGTTGTTGTTGTTGTTGTTGTTTTAATGAGGCCAACTGTTTAGTGCTCCTACTCTGACCTGTGTTGTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| CDS-3UTR CCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTAAACAGTTTCTGATATaGAACCACAGGGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSKQFLI*NHRVPL Trigger: AAGAGGAACCCTGTGGTTCCATATCAGAAACTGTTT...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS-3UTR CCA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTACAAATACATTTCTGTaGTGGAAAGGTACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSKENKTNIKGGWKGITSTNTFL*WKGTAN Trigger: ATTTGCCGTACCTTTCCACCACAGAAATGTATTTGT...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS GCA 90 bp | AGCCCGTCTGAATGGGCAGCACCGCCTGATACTTGGGCCGGGGGCTaGAGCCAGCGCCGGCTGCGACTGGCTCCCCGCCGATGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSEWAAPPDTWAGG*SQRRLRLAPRRCRL Trigger: AAGCCGGCATCGGCGGGGAGCCAGTCGCAGCCGGCGCTGGCTGCAGCCCCCGGCCCAAGTATCAGGCGGTGCTGCCCATTCAGACGGGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS GCA 90 bp | CAGCACCGCCTGATACTTGGGCCGGGGGCTGCAGCCAGCGCCGGCTaGGACTGGCTCCCCGCCGATGCCGGCTTGTTTAGTAGCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QHRLILGPGAAASAG*DWLPADAGLFSSWG Trigger: CCCCCAGCTACTAAACAAGCCGGCATCGGCGGGGAGCCAGTCGCAGCCGGCGCTGGCTGCAGCCCCCGGCCCAAGTATCAGGCGGTGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS GCA 90 bp | AGCCGCCGCCACCCCCGAGAGGGCTCTTCCTTATACTCTTCCATCTaGCCTCACTGGCCGCCAGGGTCCCAGCAGTGGCGGTGGGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SRRHPREGSSLYSSI*PHWPPGSQQWRWAR Trigger: TCGCGCCCACCGCCACTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAAGGAAGAGCCCTCTCGGGGGTGGCGGCGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS CCA 90 bp | TTATACTCTTCCATCTGCCCTCACTGGCCGCCAGGGTCCCAGCAGTaGCGGTGGGCGCGAGGGGTGGTGGCCCGGGCAGAGGTAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYSSICPHWPPGSQQ*RWARGVVARAEVVV Trigger: CACCACTACCTCTGCCCGGGCCACCACCCCTCGCGCCCACCGCCACTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS CCA 90 bp | CACCCCCGAGAGGGCTCTTCCTTATACTCTTCCATCTGCCCTCACTaGCCGCCAGGGTCCCAGCAGTGGCGGTGGGCGCGAGGGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HPREGSSLYSSICPH*PPGSQQWRWARGVV Trigger: CACCACCCCTCGCGCCCACCGCCACTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAAGGAAGAGCCCTCTCGGGGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS TCA 90 bp | ATGAGGTCCAATTGCAGCAGAAGGATCTGTTTGAGGCAGGCGGCCTaGCTGGAGGCTCCCGAGCCGCCGCCACCCCCGAGAGGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MRSNCSRRICLRQAA*LEAPEPPPPPRGLF Trigger: GAAGAGCCCTCTCGGGGGTGGCGGCGGCTCGGGAGCCTCCAGTCAGGCCGCCTGCCTCAAACAGATCCTTCTGCTGCAATTGGACCTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | GAGAACACCCAAAGACCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACGGGGGCCCCGGCTCCTaGAGCTTACGATGCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ENTQRPPSQVSHNINCRNGGPGS*SLRCRG Trigger: CCCCCGGCATCGTAAGCTCAAGGAGCCGGGGCCCCC...GTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR CAA 90 bp | ACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAGGGGGCCCCGGCTCCTaGAGCTTACGATGCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TDSGMPSPNESSIGLALLGGPGS*SLRCRG Trigger: CCCCCGGCATCGTAAGCTCAAGGAGCCGGGGCCCCC...TAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | GCACAGAAAACCCTTCTTTCAGAGGGCATGCAAGTTGCCGGAGATTACACCCCCCAGGGCGTAGGCTCTTaGGCCGCCGCCACCACGATA | + |
|
Preference number: 5 (lower is better) Translates to: AQKTLLSEGMQVAGDYTPQGVGS*AAATTI Trigger: TATCGTGGTGGCGGCGGCCAAAGAGCCTACGCCCTG...GGGGGTGTAATCTCCGGCAACTTGCATGCCCTCTGAAAGAAGGGTTTTCTGTGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR CAA 90 bp | ACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGGGCAGGAATGGGGTTTTCCTTTaGTGTCCCTTTCCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TTPTLFRRRTREARGQGRNGVFL*CPFPLR Trigger: CCGGAGTGGAAAGGGACACAAAAGGAAAACCCCATT...CCTGCCCTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS CCA 90 bp | CCCTTTCCACTCCGGCCACATGAGAAAGGCTTGGAAGGCAGAGCCTaGGAGGTCTCGCAAAGCTCCGGCTGGCGCTCCAATTTAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFPLRPHEKGLEGRA*EVSQSSGWRSNLIF Trigger: GAAAATTAAATTGGAGCGCCAGCCGGAGCTTTGCGAGACCTCCCAGGCTCTGCCTTCCAAGCCTTTCTCATGTGGCCGGAGTGGAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | CCACCCTCCCAGGTTTCACACAATATCAATTGCAGGAACAGTCGTGCACGGCAAGAGAAGGCTTTCTCCTaGGGGTGGGTGCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPSQVSHNINCRNSRARQEKAFS*GWVLGP Trigger: GGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCTC...TTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGAAACCTGGGAGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR CAA 90 bp | ACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTATCGGTTTAGCACTGTTAGGGGCCGCGGCCGCCTaGAACACTGCGGATCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TDSGMPSPNESSIGLALLGAAAA*NTADLM Trigger: CATGAGATCCGCAGTGTTCAAGGCGGCCGCGGCCCC...TAACAGTGCTAAACCGATAGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | CATGCTATTCCTCGGGCCCTAAAGTTCACGGTGAAACCTACTACACCCACACTACAGGGCGTAGGCTCTTaGGCCGCCGCCACCACGATA | + |
|
Preference number: 5 (lower is better) Translates to: HAIPRALKFTVKPTTPTLQGVGS*AAATTI Trigger: TATCGTGGTGGCGGCGGCCAAAGAGCCTACGCCCTG...TAGTGTGGGTGTAGTAGGTTTCACCGTGAACTTTAGGGCCCGAGGAATAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | AAACCTACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGTCTATCTCCTTCTCCTaGGCCTGCAACTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KPTTPTLFRRRTREARGQSISFS*ACNCCC Trigger: GCAGCAGCAGTTGCAGGCCAAGGAGAAGGAGATAGA...CTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGTAGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | CATGACAGAGACATCTCTACAGACTCTGGCATGCCATCCCCAAATGAGAGCTCTGAGAAGGCTTTCTCCTaGGGGTGGGTGCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HDRDISTDSGMPSPNESSEKAFS*GWVLGP Trigger: GGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCTC...AGAGCTCTCATTTGGGGATGGCATGCCAGAGTCTGTAGAGATGTCTCTGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACCAGGGCGTAGGCTCTTaGGCCGCCGCCACCACGATA | + |
|
Preference number: 5 (lower is better) Translates to: EDGKALPVNDNRHEGTGHQGVGS*AAATTI Trigger: TATCGTGGTGGCGGCGGCCAAAGAGCCTACGCCCTG...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS CCA 90 bp | GCCTTTCCATACGTTCAATCCGAGCAAGGAGCTTGTTTCTGTTCGTaGTCGTCGTCTGTGCTGCTAGGGATGGAATCAGGGCCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFPYVQSEQGACFCS*SSSVLLGMESGPPD Trigger: GTCAGGAGGCCCTGATTCCATCCCTAGCAGCACAGACGACGACCACGAACAGAAACAAGCTCCTTGCTCGGATTGAACGTATGGAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037930.13 |
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| CDS-3UTR CAA 90 bp | AAACCTACTACACCCACACTATTCAGAAGGCGCACCAGGGAGGCACGGGGTCAGAATGGGGTTTTCCTTTaGTGTCCCTTTCCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KPTTPTLFRRRTREARGQNGVFL*CPFPLR Trigger: CCGGAGTGGAAAGGGACACAAAAGGAAAACCCCATT...CTGACCCCGTGCCTCCCTGGTGCGCCTTCTGAATAGTGTGGGTGTAGTAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | CGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACCCTTCTTGGGGCCGCGGCCGCCTaGAACACTGCGGATCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RARQSVSSMHFTAQKTLLGAAAA*NTADLM Trigger: CATGAGATCCGCAGTGTTCAAGGCGGCCGCGGCCCC...AAGAAGGGTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR CAA 90 bp | TACCTTGGCTTCTCCTCTAAAAGTGCTAATAATTTGGGGCCATGTTCTCTTCAAGGGGGCCCCGGCTCCTaGAGCTTACGATGCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLGFSSKSANNLGPCSLQGGPGS*SLRCRG Trigger: CCCCCGGCATCGTAAGCTCAAGGAGCCGGGGCCCCC...TTGAAGAGAACATGGCCCCAAATTATTAGCACTTTTAGAGGAGAAGCCAAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| CDS GCA 90 bp | TCCTACAGGTCCGGTGAGGTGTGTGCTTCTTCTGGATCTCCAACCTaGAACGGCTTCGCTCATCCAACCAGGGTAGTTCAAAGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SYRSGEVCASSGSPT*NGFAHPTRVVQSSV Trigger: CACAGAACTTTGAACTACCCTGGTTGGATGAGCGAAGCCGTTGCAGGTTGGAGATCCAGAAGAAGCACACACCTCACCGGACCTGTAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | TTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACACATACAGGTCTCTGGAGAAGGCTTTCTCCTaGGGGTGGGTGCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPVNDNRHEGTGHTYRSLEKAFS*GWVLGP Trigger: GGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCTC...CAGAGACCTGTATGTGTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS GCA 90 bp | TGGAGCAGCTTGTGCCTTTCCTTCTCGTTATCCCTCTTCACCAGCTaGATCCGCCTTTCCATACGTTCAATCCGAGCAAGGAGCGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: WSSLCLSFSLSLFTS*IRLSIRSIRARSVS Trigger: AGATACGCTCCTTGCTCGGATTGAACGTATGGAAAGGCGGATGCAGCTGGTGAAGAGGGATAACGAGAAGGAAAGGCACAAGCTGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | CCCAACCAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGAATGGGGTTTTCCTTTaGTGTCCCTTTCCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PNQKLPLAPENTQRPPSQNGVFL*CPFPLR Trigger: CCGGAGTGGAAAGGGACACAAAAGGAAAACCCCATT...CTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTGGTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
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| CDS-3UTR CAA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGAGAAGGCTTTCTCCTaGGGGTGGGTGCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HTGLCYSLGTACYNYLKTEKAFS*GWVLGP Trigger: GGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCTC...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS-3UTR CAA 90 bp | GCAGAAACCTGGTGGTTAAATCTGTTAACCCATACCCAAATTAGGAATCTGACAGGGGCCGCGGCCGCCTaGAACACTGCGGATCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: AETWWLNLLTHTQIRNLTGAAAA*NTADLM Trigger: CATGAGATCCGCAGTGTTCAAGGCGGCCGCGGCCCC...TGTCAGATTCCTAATTTGGGTATGGGTTAACAGATTTAACCACCAGGTTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
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| CDS-3UTR CAA 90 bp | CCACCCCAAATCTCTACCTCACCACCAAAAGTTTGGCTAATAGGATCAAGCCCCTCTATCTCCTTCTCCTaGGCCTGCAACTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPQISTSPPKVWLIGSSPSISFS*ACNCCC Trigger: GCAGCAGCAGTTGCAGGCCAAGGAGAAGGAGATAGA...GGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGGTAGAGATTTGGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
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| CDS TCA 90 bp | ATACATTTCTGTGGTGGAAAGGTACGGCAAATCTTCCATCTCACTTaGGAAGGCTTTCTCCTTGGGGTGGGTGCTGGGTCCCTTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IHFCGGKVRQIFHLT*EGFLLGVGAGSLLG Trigger: CCCCAAAAGGGACCCAGCACCCACCCCAAGGAGAAAGCCTTCTCAAGTGAGATGGAAGATTTGCCGTACCTTTCCACCACAGAAATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
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| CDS GCA 90 bp | TGGAGCAGCTTGTGCCTTTCCTTCTCGTTATCCCTCTTCACCAGCTaGATCCGCCTTTCCATACGTTCAATCCGAGCAAGGAGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WSSLCLSFSLSLFTS*IRLSIRSIRARSLF Trigger: AAACAAGCTCCTTGCTCGGATTGAACGTATGGAAAGGCGGATGCAGCTGGTGAAGAGGGATAACGAGAAGGAAAGGCACAAGCTGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037930.13 |
||
| CDS CCA 90 bp | TTCTTTGGAGAGGATTCCCGTAATGGTAACGGTGATGGGGGAGGCTaGTGCCAACGACACAAATACATTTCTGTGGTGGAAAGGTACGGC | + |
|
Preference number: 5 (lower is better) Translates to: FFGEDSRNGNGDGGG*CQRHKYISVVERYG Trigger: GCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCTCTCCAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
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| CDS GCA 90 bp | TTTGGAGAGGATTCCCGTAATGGTAACGGTGATGGGGGAGGCTGGTaGCAACGACACAAATACATTTCTGTGGTGGAAAGGTACGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FGEDSRNGNGDGGGW*QRHKYISVVERYGK Trigger: TTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCTCTCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
||
| CDS CCA 90 bp | ACGGTGATGGGGGAGGCTGGTGCCAACGACACAAATACATTTCTGTaGTGGAAAGGTACGGCAAATCTTCCATCTCACTTGAGAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVMGEAGANDTNTFL*WKGTANLPSHLRRL Trigger: AAGCCTTCTCAAGTGAGATGGAAGATTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
||
| CDS-3UTR CAA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACATCCGAGCAAGGAGCTaGTTTCTGTTCGTGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: EDGKALPVNDNRHEGTGHIRARS*FLFVVV Trigger: GACGACCACGAACAGAAACAAGCTCCTTGCTCGGAT...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037930.13 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCAATGGGGTTTTCCTTTaGTGTCCCTTTCCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LCYSLGTACYNYLKTGYRNGVFL*CPFPLR Trigger: CCGGAGTGGAAAGGGACACAAAAGGAAAACCCCATT...GCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | CTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCAGCACAGTCTCCTCCTTCTTaGGAGAGGATTCCCGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: LFSRNSMLQLSEDRLPPAQSPPS*ERIPVM Trigger: CATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTG...TGCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGGTTTCACAGTCTCCTCCTTCTTaGGAGAGGATTCCCGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: QKLPLAPENTQRPPSQVSQSPPS*ERIPVM Trigger: CATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTG...TGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CAA 90 bp | CATGCTATTCCTCGGGCCCTAAAGTTCACGGTGAAACCTACTACACCCACACTACAGTCTCCTCCTTCTTaGGAGAGGATTCCCGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: HAIPRALKFTVKPTTPTLQSPPS*ERIPVM Trigger: CATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTG...TAGTGTGGGTGTAGTAGGTTTCACCGTGAACTTTAGGGCCCGAGGAATAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS CCA 90 bp | GTGATGGGGGAGGCTGGTGCCAACGACACAAATACATTTCTGTGGTaGAAAGGTACGGCAAATCTTCCATCTCACTTGAGAAGGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VMGEAGANDTNTFLW*KGTANLPSHLRRLS Trigger: AGAAAGCCTTCTCAAGTGAGATGGAAGATTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
||
| CDS-3UTR CAA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACCAGTCTCCTCCTTCTTaGGAGAGGATTCCCGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: EDGKALPVNDNRHEGTGHQSPPS*ERIPVM Trigger: CATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTG...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCCCCTCCAAGAAGGAATaGCTACAGTCTCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSPSKKE*LQSPPS Trigger: AGAAGGAGGAGACTGTAGCAATTCCTTCTTGGAGGG...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | CTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCAGCACTTTTCTGGGGTTTCTaGGCTCCTCAATTCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSRNSMLQLSEDRLPPALFWGF*APQFTF Trigger: AAACGTGAATTGAGGAGCCAAGAAACCCCAGAAAAG...TGCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTACCATTGGCCCCTGAGAACACCCAAAGACCACCCTCCCAGGTTTCACTTTTCTGGGGTTTCTaGGCTCCTCAATTCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QKLPLAPENTQRPPSQVSLFWGF*APQFTF Trigger: AAACGTGAATTGAGGAGCCAAGAAACCCCAGAAAAG...TGAAACCTGGGAGGGTGGTCTTTGGGTGTTCTCAGGGGCCAATGGTAATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CAA 90 bp | CTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCAGCAAAATGTCTGAAGGATTaGGGTCCCTTAGAGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LFSRNSMLQLSEDRLPPAKCLKD*GPLEAL Trigger: TAGAGCCTCTAAGGGACCCAAATCCTTCAGACATTT...TGCTGGCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | TCACACAATATCAATTGCAGGAACAGTCGTGCACGGCAAAGTGTAAGTTCTATGTCTATCTCCTTCTCCTaGGCCTGCAACTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHNINCRNSRARQSVSSMSISFS*ACNCCC Trigger: GCAGCAGCAGTTGCAGGCCAAGGAGAAGGAGATAGA...CATAGAACTTACACTTTGCCGTGCACGACTGTTCCTGCAATTGATATTGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGCCAACCACACACCCTACATACCTTGGCTTCTCCTCTAAAAGTGCTAATAATGGCATCAGACACCTaGCTACAGTCTCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MGQPHTLHTLASPLKVLIMASDT*LQSPPS Trigger: AGAAGGAGGAGACTGTAGCAAGGTGTCTGATGCCAT...TATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGTTGGCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CAA 90 bp | CATACAGGTCTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACACCCTCCAAGAAGGAATaGCTACAGTCTCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTGLCYSLGTACYNYLKTPSKKE*LQSPPS Trigger: AGAAGGAGGAGACTGTAGCAATTCCTTCTTGGAGGG...TGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAGACCTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | GAGGATGGAAAGGCATTACCAGTGAATGATAACAGACATGAGGGCACAGGTCACAAATGTCTGAAGGATTaGGGTCCCTTAGAGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: EDGKALPVNDNRHEGTGHKCLKD*GPLEAL Trigger: TAGAGCCTCTAAGGGACCCAAATCCTTCAGACATTT...GTGACCTGTGCCCTCATGTCTGTTATCATTCACTGGTAATGCCTTTCCATCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCAAATGTCTGAAGGATTaGGGTCCCTTAGAGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSKCLKD*GPLEAL Trigger: TAGAGCCTCTAAGGGACCCAAATCCTTCAGACATTT...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAGAGCCACACACACACACACACACACACACACACACACACACACACACGTCTAGCTCCAGTTTaGCATGCCTCTTTGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: KTQSHTHTHTHTHTHTHTRLAPV*HASLKI Trigger: TATTTTCAAAGAGGCATGCAAAACTGGAGCTAGACG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTGGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTATTCTCTCGGAACAGCATGCTACAACTATCTGAAGACAGGCTACCGCCGTCTAGCTCCAGTTTaGCATGCCTCTTTGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: LCYSLGTACYNYLKTGYRRLAPV*HASLKI Trigger: TATTTTCAAAGAGGCATGCAAAACTGGAGCTAGACG...GCGGTAGCCTGTCTTCAGATAGTTGTAGCATGCTGTTCCGAGAGAATAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | AGGAACTTCAGTTACCCATCAACTAAGAAAGTGAACCAGCTGCACGTCTCCTCCTTCGATGAGGTCCAATaGCAGCAGAAGGATCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RNFSYPSTKKVNQLHVSSFDEVQ*QQKDLF Trigger: AAACAGATCCTTCTGCTGCAATTGGACCTCATCGAA...GGAGGAGACGTGCAGCTGGTTCACTTTCTTAGTTGATGGGTAACTGAAGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS TCA 90 bp | TTCTGGGGTTTCTTGGCTCCTCAATTCACGTTTACAAACAGTTTCTaGTATGGAACCACAGGGTTCCTCTTTAATGGGAGAGTGCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FWGFLAPQFTFTNSF*YGTTGFLFNGRVLR Trigger: CCTAAGCACTCTCCCATTAAAGAGGAACCCTGTGGTTCCATATCAGAAACTGTTTGTAAACGTGAATTGAGGAGCCAAGAAACCCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | CGTGCACGGCAAAGTGTAAGTTCTATGCATTTCACAGCACAGAAAACCCTTCTTTTCGATGAGGTCCAATaGCAGCAGAAGGATCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RARQSVSSMHFTAQKTLLFDEVQ*QQKDLF Trigger: AAACAGATCCTTCTGCTGCAATTGGACCTCATCGAA...AAGAAGGGTTTTCTGTGCTGTGAAATGCATAGAACTTACACTTTGCCGTGCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107485.8 |
||
| CDS TCA 90 bp | TCATCTGGCTCAGGGAAAAATGAGGTAACCTCAGGCTCAGATTCCTaGATTCCTTTCTTTTTATACATTCTGAGCTGCAGTCGCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSGSGKNEVTSGSDS*IPFFLYILSCSRCK Trigger: TTTACAGCGACTGCAGCTCAGAATGTATAAAAAGAAAGGAATTCAGGAATCTGAGCCTGAGGTTACCTCATTTTTCCCTGAGCCAGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCTAAACATCTTCTTTGTTGGGGGTGGGAAGGAACTTCAGTTACCCATCCGTCTAGCTCCAGTTTaGCATGCCTCTTTGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: SFLNIFFVGGGKELQLPIRLAPV*HASLKI Trigger: TATTTTCAAAGAGGCATGCAAAACTGGAGCTAGACG...GATGGGTAACTGAAGTTCCTTCCCACCCCCAACAAAGAAGATGTTTAGAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000107487.10 |
||
| CDS-3UTR CAA 90 bp | GCAGAAACCTGGTGGTTAAATCTGTTAACCCATACCCAAATTAGGAATCTGACATTCGATGAGGTCCAATaGCAGCAGAAGGATCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AETWWLNLLTHTQIRNLTFDEVQ*QQKDLF Trigger: AAACAGATCCTTCTGCTGCAATTGGACCTCATCGAA...TGTCAGATTCCTAATTTGGGTATGGGTTAACAGATTTAACCACCAGGTTTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037915.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTAAAGAAAACAAAACTAATATAAAGGGAGGATGGAAAGGCATTACCAGTCTTTTCTGGGGTTTCTaGGCTCCTCAATTCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QSKENKTNIKGGWKGITSLFWGF*APQFTF Trigger: AAACGTGAATTGAGGAGCCAAGAAACCCCAGAAAAG...ACTGGTAATGCCTTTCCATCCTCCCTTTATATTAGTTTTGTTTTCTTTACTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS CCA 72 bp | TGCCCTCACTGGCCGCCAGGGTCCCAGCAGTGGCGGTaGGCGCGAGGGGTGGTGGCCCGGGCAGAGGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CPHWPPGSQQWR*ARGVVARAEVV Trigger: CACTACCTCTGCCCGGGCCACCACCCCTCGCGCCCACCGCCACTGCTGGGACCCTGGCGGCCAGTGAGGGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
||
| CDS CCA 72 bp | TCCATCTGCCCTCACTGGCCGCCAGGGTCCCAGCAGTaGCGGTGGGCGCGAGGGGTGGTGGCCCGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SICPHWPPGSQQ*RWARGVVARAE Trigger: CTCTGCCCGGGCCACCACCCCTCGCGCCCACCGCCACTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS CCA 72 bp | CCCGGCTCCTTGAGCTTACGATGCCGGGGGAGGAAATaGGCTTCGGCCGCCCCGGACTCGTCCTCGGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGSLSLRCRGRK*ASAAPDSSSGP Trigger: CGGGCCCGAGGACGAGTCCGGGGCGGCCGAAGCCCATTTCCTCCCCCGGCATCGTAAGCTCAAGGAGCCGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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| CDS GCA 72 bp | CTGATACTTGGGCCGGGGGCTGCAGCCAGCGCCGGCTaGGACTGGCTCCCCGCCGATGCCGGCTTGTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LILGPGAAASAG*DWLPADAGLFS Trigger: ACTAAACAAGCCGGCATCGGCGGGGAGCCAGTCGCAGCCGGCGCTGGCTGCAGCCCCCGGCCCAAGTATCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
||
| CDS GCA 72 bp | CACCCCCGAGAGGGCTCTTCCTTATACTCTTCCATCTaGCCTCACTGGCCGCCAGGGTCCCAGCAGTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HPREGSSLYSSI*PHWPPGSQQWR Trigger: CCGCCACTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAAGGAAGAGCCCTCTCGGGGGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
||
| CDS CCA 72 bp | GAGGGCTCTTCCTTATACTCTTCCATCTGCCCTCACTaGCCGCCAGGGTCCCAGCAGTGGCGGTGGGCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: EGSSLYSSICPH*PPGSQQWRWAR Trigger: TCGCGCCCACCGCCACTGCTGGGACCCTGGCGGCCAGTGAGGGCAGATGGAAGAGTATAAGGAAGAGCCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000107485.8 ENSMUST00000107487.10 |
||
| CDS CCA 72 bp | CTCCGGCCACATGAGAAAGGCTTGGAAGGCAGAGCCTaGGAGGTCTCGCAAAGCTCCGGCTGGCGCTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LRPHEKGLEGRA*EVSQSSGWRSN Trigger: ATTGGAGCGCCAGCCGGAGCTTTGCGAGACCTCCCAGGCTCTGCCTTCCAAGCCTTTCTCATGTGGCCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 |
||
| CDS TCA 72 bp | TGTGGTGGAAAGGTACGGCAAATCTTCCATCTCACTTaGGAAGGCTTTCTCCTTGGGGTGGGTGCTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGGKVRQIFHLT*EGFLLGVGAGS Trigger: GGACCCAGCACCCACCCCAAGGAGAAAGCCTTCTCAAGTGAGATGGAAGATTTGCCGTACCTTTCCACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
||
| CDS GCA 72 bp | TCCGGTGAGGTGTGTGCTTCTTCTGGATCTCCAACCTaGAACGGCTTCGCTCATCCAACCAGGGTAGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SGEVCASSGSPT*NGFAHPTRVVQ Trigger: TTGAACTACCCTGGTTGGATGAGCGAAGCCGTTGCAGGTTGGAGATCCAGAAGAAGCACACACCTCACCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS CAA 90 bp | ACCAGCTGCATCCGCCTTTCCATACGTTCAATCCGAGCAAGGAGCTaGTTTCTGTTCGTGGTCGTCGTCTGTGCTGCTAGGGATGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: TSCIRLSIRSIRARS*FLFVVVVCAARDGI Trigger: GATTCCATCCCTAGCAGCACAGACGACGACCACGAACAGAAACAAGCTCCTTGCTCGGATTGAACGTATGGAAAGGCGGATGCAGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037930.13 |
||
| CDS CCA 72 bp | TACGTTCAATCCGAGCAAGGAGCTTGTTTCTGTTCGTaGTCGTCGTCTGTGCTGCTAGGGATGGAATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: YVQSEQGACFCS*SSSVLLGMESG Trigger: CCCTGATTCCATCCCTAGCAGCACAGACGACGACCACGAACAGAAACAAGCTCCTTGCTCGGATTGAACGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037930.13 |
||
| CDS CAA 72 bp | ATCCGCCTTTCCATACGTTCAATCCGAGCAAGGAGCTaGTTTCTGTTCGTGGTCGTCGTCTGTGCTGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRLSIRSIRARS*FLFVVVVCAAR Trigger: CCTAGCAGCACAGACGACGACCACGAACAGAAACAAGCTCCTTGCTCGGATTGAACGTATGGAAAGGCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037930.13 |
||
| CDS CAA 90 bp | CAACACTTGATGGCATCAGACACCTTGCTACAGTCTCCTCCTTCTTaGGAGAGGATTCCCGTAATGGTAACGGTGATGGGGGAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QHLMASDTLLQSPPS*ERIPVMVTVMGEAG Trigger: ACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAAGGTGTCTGATGCCATCAAGTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000126969.2 |
||
| CDS GCA 72 bp | TTGTGCCTTTCCTTCTCGTTATCCCTCTTCACCAGCTaGATCCGCCTTTCCATACGTTCAATCCGAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLSFSLSLFTS*IRLSIRSIRAR Trigger: CCTTGCTCGGATTGAACGTATGGAAAGGCGGATGCAGCTGGTGAAGAGGGATAACGAGAAGGAAAGGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 |
||
| CDS GCA 72 bp | GATTCCCGTAATGGTAACGGTGATGGGGGAGGCTGGTaGCAACGACACAAATACATTTCTGTGGTGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSRNGNGDGGGW*QRHKYISVVER Trigger: CCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
||
| CDS CCA 72 bp | GAGGATTCCCGTAATGGTAACGGTGATGGGGGAGGCTaGTGCCAACGACACAAATACATTTCTGTGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EDSRNGNGDGGG*CQRHKYISVVE Trigger: TTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
||
| CDS CCA 72 bp | TCTGAAGGATTTGGGTCCCTTAGAGGCTCTACTGAGTaGTCCCTCCAAGAAGGAATTGCTACAGTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SEGFGSLRGSTE*SLQEGIATVSS Trigger: GGAGGAGACTGTAGCAATTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCTAAGGGACCCAAATCCTTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS CAA 72 bp | CCCTCCAAGAAGGAATTGCTACAGTCTCCTCCTTCTTaGGAGAGGATTCCCGTAATGGTAACGGTGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSKKELLQSPPS*ERIPVMVTVMG Trigger: CCCCATCACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAATTCCTTCTTGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037930.13 ENSMUST00000107487.10 |
||
| CDS CAA 72 bp | CACTGTCATCCAGGTTCTCCAAAATGTCTGAAGGATTaGGGTCCCTTAGAGGCTCTACTGAGTGGTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HCHPGSPKCLKD*GPLEALLSGPS Trigger: GGAGGGACCACTCAGTAGAGCCTCTAAGGGACCCAAATCCTTCAGACATTTTGGAGAACCTGGATGACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 ENSMUST00000126969.2 |
||
| CDS CAA 72 bp | ATGGCATCAGACACCTTGCTACAGTCTCCTCCTTCTTaGGAGAGGATTCCCGTAATGGTAACGGTGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MASDTLLQSPPS*ERIPVMVTVMG Trigger: CCCCATCACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAAGGTGTCTGATGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000126969.2 |
||
| CDS GCA 72 bp | ACTGAGGGAGGGCATCCACAAAAAGGCCAACATGTGTaGCGTTTTCTCCTCTTCTCGTCTAGCTCCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TEGGHPQKGQHV*RFLLFSSSSSF Trigger: AAAACTGGAGCTAGACGAGAAGAGGAGAAAACGGCACACATGTTGGCCTTTTTGTGGATGCCCTCCCTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126969.2 |
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| CDS CCA 72 bp | GGGGAGGCTGGTGCCAACGACACAAATACATTTCTGTaGTGGAAAGGTACGGCAAATCTTCCATCTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: GEAGANDTNTFL*WKGTANLPSHL Trigger: CAAGTGAGATGGAAGATTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
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| CDS CCA 72 bp | TCTGAAGGATTTGGGTCCCTTAGAGGCTCTACTGAGTaGTCCCTCCAAGAAGGAACAGCCAAGACTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SEGFGSLRGSTE*SLQEGTAKTEV Trigger: AACTTCAGTCTTGGCTGTTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCTAAGGGACCCAAATCCTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037915.9 ENSMUST00000126969.2 |
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| CDS CCA 72 bp | GAGGCTGGTGCCAACGACACAAATACATTTCTGTGGTaGAAAGGTACGGCAAATCTTCCATCTCACTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: EAGANDTNTFLW*KGTANLPSHLR Trigger: TCTCAAGTGAGATGGAAGATTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 ENSMUST00000126969.2 |
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| CDS CAA 90 bp | TTGAAAATACACTGTCATCCAGGTTCTCCAAAATGTCTGAAGGATTaGGGTCCCTTAGAGGCTCTACTGAGTGGTCCCTCCAAGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LKIHCHPGSPKCLKD*GPLEALLSGPSKKE Trigger: TTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCTAAGGGACCCAAATCCTTCAGACATTTTGGAGAACCTGGATGACAGTGTATTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 ENSMUST00000126969.2 |
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| CDS CAA 90 bp | GCCAACATGTGTGCCGTTTTCTCCTCTTCTCGTCTAGCTCCAGTTTaGCATGCCTCTTTGAAAATACACTGTCATCCAGGTTCTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: ANMCAVFSSSRLAPV*HASLKIHCHPGSPK Trigger: TTTTGGAGAACCTGGATGACAGTGTATTTTCAAAGAGGCATGCAAAACTGGAGCTAGACGAGAAGAGGAGAAAACGGCACACATGTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126969.2 |
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| CDS CAA 72 bp | CCCATCGTTTTCTCCTCTTCTCGTCTAGCTCCAGTTTaGCATGCCTCTTTGAAAATACACTGTCATCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PIVFSSSRLAPV*HASLKIHCHPG Trigger: ACCTGGATGACAGTGTATTTTCAAAGAGGCATGCAAAACTGGAGCTAGACGAGAAGAGGAGAAAACGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS CAA 72 bp | TGTGCCGTTTTCTCCTCTTCTCGTCTAGCTCCAGTTTaGCATGCCTCTTTGAAAATACACTGTCATCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CAVFSSSRLAPV*HASLKIHCHPG Trigger: ACCTGGATGACAGTGTATTTTCAAAGAGGCATGCAAAACTGGAGCTAGACGAGAAGAGGAGAAAACGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126969.2 |
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| CDS TCA 72 bp | TGCAGTCGCTGTAAAATTCTTTGTTCCCTGATCCTCTaGATATCCCATCGTTTTCTCCTCTTCTCGTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: CSRCKILCSLIL*ISHRFLLFSSS Trigger: GCTAGACGAGAAGAGGAGAAAACGATGGGATATTCAGAGGATCAGGGAACAAAGAATTTTACAGCGACTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS TCA 72 bp | CAGCAAACTTTCAACATCATCTGGCTCAGGGAAAAATaGGGTAACCTCAGGCTCAGATTCCTGAATTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: QQTFNIIWLREK*GNLRLRFLNSF Trigger: AAAGGAATTCAGGAATCTGAGCCTGAGGTTACCTCATTTTTCCCTGAGCCAGATGATGTTGAAAGTTTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS CAA 90 bp | TCTGAATATCCCATCGTTTTCTCCTCTTCTCGTCTAGCTCCAGTTTaGCATGCCTCTTTGAAAATACACTGTCATCCAGGTTCTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SEYPIVFSSSRLAPV*HASLKIHCHPGSPK Trigger: TTTTGGAGAACCTGGATGACAGTGTATTTTCAAAGAGGCATGCAAAACTGGAGCTAGACGAGAAGAGGAGAAAACGATGGGATATTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107487.10 |
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| CDS TCA 72 bp | TTCTTGGCTCCTCAATTCACGTTTACAAACAGTTTCTaGTATGGAACCACAGGGTTCCTCTTTAATGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FLAPQFTFTNSF*YGTTGFLFNGR Trigger: TCTCCCATTAAAGAGGAACCCTGTGGTTCCATATCAGAAACTGTTTGTAAACGTGAATTGAGGAGCCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037915.9 ENSMUST00000037930.13 ENSMUST00000107485.8 ENSMUST00000107487.10 |
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