Pregenerated sensors for MSI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069769Ensembl transcript IDs: ENSMUST00000092794.12, ENSMUST00000107908.2, ENSMUST00000107909.8, ENSMUST00000144699.8
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTGGGGGAGCTTGCCAGTGTGTCTCTTGTTCAGTGTGCTTACCTaGAGCCTGCCCGCTTCGCTACTCTCTCTCTGGCTGGCTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: RWGSLPVCLLFSVLT*SLPASLLSLWLAGF Trigger: AAAGCCAGCCAGCCAGAGAGAGAGTAGCGAAGCGGGCAGGCTGCAGGTAAGCACACTGAACAAGAGACACACTGGCAAGCTCCCCCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR TCA 90 bp | AAAGTGAATGGAGAAAGGGTGTATTCTCGCAGGCTTATCCACGCCTaGCCCACGGGTTCCCCCGTCTGGGGACAGGGTGAAGAGAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: KVNGERVYSRRLIHA*PTGSPVWGQGEERG Trigger: GCCTCTCTCTTCACCCTGTCCCCAGACGGGGGAACCCGTGGGTCAGGCGTGGATAAGCCTGCGAGAATACACCCTTTCTCCATTCACTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR GCA 90 bp | GGAGCTTGCCAGTGTGTCTCTTGTTCAGTGTGCTTACCTGCAGCCTaGCCGCTTCGCTACTCTCTCTCTGGCTGGCTGGCTTTTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: GACQCVSCSVCLPAA*PLRYSLSGWLAFAF Trigger: GAAGGCAAAAGCCAGCCAGCCAGAGAGAGAGTAGCGAAGCGGGCAGGCTGCAGGTAAGCACACTGAACAAGAGACACACTGGCAAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR GCA 90 bp | GGACGTCACCTAAACAAAGGGCCACTCAGAAACTTCGCCCAGTCTTaGCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAA | + |
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Preference number: 1 (lower is better) Translates to: GRHLNKGPLRNFAQS*LDIQVCSHSETAME Trigger: TTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTGTTTAGGTGACGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR CCA 90 bp | TTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGAAAGAACGGCTaGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LLVLNCILFAVRKNG*GKKSQSWIAESSGL Trigger: CAACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTTCTTTCTCACAGCGAAGAGGATACAATTCAGCACCAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
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| 3UTR TCA 90 bp | ACGTTTAAAAGCTGTTGTCTTATATTACAGCAGGTAGCCGATGGGTaGGATGAGATGTGTCAACCCTCAATCCAAGTGTGCCACCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: TFKSCCLILQQVADG*DEMCQPSIQVCHLW Trigger: CCAGAGGTGGCACACTTGGATTGAGGGTTGACACATCTCATCTCACCCATCGGCTACCTGCTGTAATATAAGACAACAGCTTTTAAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR GCA 90 bp | GCGGACAGAAGAGTAATTAGCCAGTGCCCTTGTGAGACACTGACTTaGTGGGAATCGAGTCTCTCTCTCTCTTTGTTGTTGTTTCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: ADRRVISQCPCETLT*WESSLSLSLLLFLK Trigger: TTTAAGAAACAACAACAAAGAGAGAGAGAGACTCGATTCCCAGCAAGTCAGTGTCTCACAAGGGCACTGGCTAATTACTCTTCTGTCCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR CCA 90 bp | GACAGAAGAGTAATTAGCCAGTGCCCTTGTGAGACACTGACTTGCTaGGAATCGAGTCTCTCTCTCTCTTTGTTGTTGTTTCTTAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: DRRVISQCPCETLTC*ESSLSLSLLLFLKV Trigger: TACTTTAAGAAACAACAACAAAGAGAGAGAGAGACTCGATTCCCAGCAAGTCAGTGTCTCACAAGGGCACTGGCTAATTACTCTTCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR CCA 90 bp | GTGCAGCAGCTCATTGTAATAAATGTCGCGTTCAGTGCCTCACACTaGCTGTGCCTTAAGTACCAAATTTATAAACGTAACAATTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: VQQLIVINVAFSASH*LCLKYQIYKRNNLK Trigger: TTTTAAATTGTTACGTTTATAAATTTGGTACTTAAGGCACAGCCAGTGTGAGGCACTGAACGCGACATTTATTACAATGAGCTGCTGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR TCA 90 bp | TTTGGAGACTTGTCGTGTGAAGATGCTTCTGCGCTATCCCGTCTGTaGATGTCTACATTAGTCTACTTGTTAGTAAAATTTATAAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: FGDLSCEDASALSRL*MSTLVYLLVKFIKV Trigger: TACTTTTATAAATTTTACTAACAAGTAGACTAATGTAGACATTCACAGACGGGATAGCGCAGAAGCATCTTCACACGACAAGTCTCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR CAA 90 bp | CGCTTTCTGCTCTCGCTGAGGTGGGGGAGCTTGCCAGTGTGTCTCTaGTTCAGTGTGCTTACCTGCAGCCTGCCCGCTTCGCTACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RFLLSLRWGSLPVCL*FSVLTCSLPASLLS Trigger: AGAGAGTAGCGAAGCGGGCAGGCTGCAGGTAAGCACACTGAACAAGAGACACACTGGCAAGCTCCCCCACCTCAGCGAGAGCAGAAAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATAGAGCGTTCTATGAGGTaGTGGGAGTGTGGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: AHATQEHTHRLHTGWHSIERSMR*WECGGD Trigger: ATCTCCCCCACACTCCCATCACCTCATAGAACGCTC...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR CCA 90 bp | TCCACCTCCCCTCTAGGGAGGAGAGGACCTTGGGGTCTCAGGCAGATGGATCTGCTTCTGTTGTTGTACTaGCTTCATCGAGGTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: STSPLGRRGPWGLRQMDLLLLLY*LHRGSL Trigger: GAGGGAACCTCGATGAAGCCAGTACAACAACAGAAG...CAGATCCATCTGCCTGAGACCCCAAGGTCCTCTCCTCCCTAGAGGGGAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATAAACTTCGCCCAGTCTTaGCTGGACATCCAGGTATGC | + |
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Preference number: 2 (lower is better) Translates to: AHATQEHTHRLHTGWHSINFAQS*LDIQVC Trigger: GCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTT...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATAAACATTCACTGGCCGTaGATTGCTGTGCAGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: AHATQEHTHRLHTGWHSINIHWP*IAVQWN Trigger: GTTCCACTGCACAGCAATTCACGGCCAGTGAATGTT...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGGCTGGGGACAGGACATCAGCAACGCGGACAGAAGAGTAATTAGCCAGGAGACGTCACAAAAATaGACGGCTAGAGAGTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: DRGWGQDISNADRRVISQETSQK*TARESV Trigger: AACAGACTCTCTAGCCGTTCATTTTTGTGACGTCTC...CTGGCTAATTACTCTTCTGTCCGCGTTGCTGATGTCCTGTCCCCAGCCCCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR CAA 90 bp | TTTCTCCCCCAGGGAAGGTCAGAGGAGGGGGTCCCACATTCGCTATaGAGCTTAACTGAAACAAAGACAAAGATGGACACCAGTGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: FLPQGRSEEGVPHSL*SLTETKTKMDTSAE Trigger: TTCAGCACTGGTGTCCATCTTTGTCTTTGTTTCAGTTAAGCTCAATAGCGAATGTGGGACCCCCTCCTCTGACCTTCCCTGGGGGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGGTGGGGGTCCAGGTCTaGGGACGTCACCTAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: KALIGKEDPQNTAVLTLLVGVQV*GRHLNK Trigger: TTTGTTTAGGTGACGTCCTCAGACCTGGACCCCCAC...CAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATAAGACCTTGGGTTAGTTaGAACCACATCAAATCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AHATQEHTHRLHTGWHSIRPWVS*NHIKSA Trigger: TGCTGATTTGATGTGGTTTCAACTAACCCAAGGTCT...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGGCTGGGGACAGGACATCAGCAACGCGGACAGAAGAGTAATTAGCCAGCTCTCTGATGATACTTaGAGCACTGAGGTATCAAAA | + |
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Preference number: 2 (lower is better) Translates to: DRGWGQDISNADRRVISQLSDDT*STEVSK Trigger: TTTTGATACCTCAGTGCTGCAAGTATCATCAGAGAG...CTGGCTAATTACTCTTCTGTCCGCGTTGCTGATGTCCTGTCCCCAGCCCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATAGCCTCACACTGGCTGTaGCTTAAGTACCAAATTTAT | + |
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Preference number: 2 (lower is better) Translates to: AHATQEHTHRLHTGWHSIASHWL*LKYQIY Trigger: ATAAATTTGGTACTTAAGGCACAGCCAGTGTGAGGC...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTATTACAGTCTCAGAACTaGTACCAAAAATGGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SLCPPPAPRITTSIQCVLLQSQN*YQKWRV Trigger: TACTCTCCATTTTTGGTACCAGTTCTGAGACTGTAA...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR CAA 90 bp | CTATTACATATGGAATTCCGAGTTTATAACACCATGAATGGCAGATaGGCTAGCCCACGCTACTCAAGAGCACACTCACAGACTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LLHMEFRVYNTMNGR*ASPRYSRAHSQTPH Trigger: GTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGCTAGCCAATCTGCCATTCATGGTGTTATAAACTCGGAATTCCATATGTAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAAATGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGTGGGGGTCCAGGTCTaGGGACGTCACCTAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: YQKWRVTSPSQHPLKARTVGVQV*GRHLNK Trigger: TTTGTTTAGGTGACGTCCTCAGACCTGGACCCCCAC...TGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCATTTTTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR CCA 90 bp | TCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAAACTGGTACCAAAAATaGAGAGTAACATCACCATCT | + |
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Preference number: 2 (lower is better) Translates to: SMPTSRSAYHNFDSVCAKNWYQK*RVTSPS Trigger: AGATGGTGATGTTACTCTCCATTTTTGGTACCAGTT...TTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTTCGCTGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCAAGAAAAGCCAGAGCTaGATTGCAGAAAGCTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: HLRWVIYCSALLVLNCILKKSQS*IAESSG Trigger: CCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTT...GAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCAGCGAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGAATCAAAAAACTTCGCCCAGTCTTaGCTGGACATCCAGGTATGC | + |
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Preference number: 2 (lower is better) Translates to: WRVTSPSQHPLKARTESKNFAQS*LDIQVC Trigger: GCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTT...TTTTGATTCTGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCACTACCAAATGTGATTaGGGGAGATTTAAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ANCMSLLQHKIESMPTSRTTKCD*GRFKRR Trigger: TCTCCTTTTAAATCTCCCTCAATCACATTTGGTAGT...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCAACTGGTACCAAAAATaGAGAGTAACATCACCATCT | + |
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Preference number: 2 (lower is better) Translates to: ANCMSLLQHKIESMPTSRNWYQK*RVTSPS Trigger: AGATGGTGATGTTACTCTCCATTTTTGGTACCAGTT...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCTTACAGTCTCAGAACTaGTACCAAAAATGGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: ANCMSLLQHKIESMPTSRLQSQN*YQKWRV Trigger: TACTCTCCATTTTTGGTACCAGTTCTGAGACTGTAA...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR CAA 90 bp | CTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATaGCCGAAAATAGATATACTTAGGTTAACAAAGAGACGTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LIGKEDPQNTAVLTL*PKIDILRLTKRRHK Trigger: TTTGTGACGTCTCTTTGTTAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | ATATTAAGCTGGGTGACTACCAGACTAAGTCAAAAATCACTACCAAATGTGATTAGCCGATGGGTGAGATaGGATGTGTCAACCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: ILSWVTTRLSQKSLPNVISRWVR*DVSTLN Trigger: ATTGAGGGTTGACACATCTCATCTCACCCATCGGCT...AATCACATTTGGTAGTGATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGAATCAAAAACTACCAAATGTGATTaGGGGAGATTTAAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: WRVTSPSQHPLKARTESKTTKCD*GRFKRR Trigger: TCTCCTTTTAAATCTCCCTCAATCACATTTGGTAGT...TTTTGATTCTGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR TCA 72 bp | CGCCTGACCCACGGGTTCCCCCGTCTGGGGACAGGGTaGAGAGAGAGGCAGAATATCCTAGGACCCTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: RLTHGFPRLGTG*RERQNILGPFG Trigger: TCCAAAGGGTCCTAGGATATTCTGCCTCTCTCTTCACCCTGTCCCCAGACGGGGGAACCCGTGGGTCAGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR TCA 72 bp | GGAGAAAGGGTGTATTCTCGCAGGCTTATCCACGCCTaGCCCACGGGTTCCCCCGTCTGGGGACAGGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: GERVYSRRLIHA*PTGSPVWGQGE Trigger: TTCACCCTGTCCCCAGACGGGGGAACCCGTGGGTCAGGCGTGGATAAGCCTGCGAGAATACACCCTTTCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR TCA 72 bp | GGGGTGGAGGCATCTCCACCAGCCCCACATCCAGGCTaGAATAGGGAGGGAACCAGGAGTCAACTGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GVEASPPAPHPG*NREGTRSQLLL Trigger: GAGCAGCAGTTGACTCCTGGTTCCCTCCCTATTTCAGCCTGGATGTGGGGCTGGTGGAGATGCCTCCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR CCA 72 bp | GAAGGCCACGAACCACATATGCAGAGGCTCCTGGGGTaGAGGCATCTCCACCAGCCCCACATCCAGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: EGHEPHMQRLLG*RHLHQPHIQAE Trigger: TTCAGCCTGGATGTGGGGCTGGTGGAGATGCCTCCACCCCAGGAGCCTCTGCATATGTGGTTCGTGGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR GCA 72 bp | CAGGCTGAAATAGGGAGGGAACCAGGAGTCAACTGCTaGTCCACCTCCCCTCTAGGGAGGAGAGGACCTTGG | + |
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Preference number: 3 (lower is better) Translates to: QAEIGREPGVNC*STSPLGRRGPW Trigger: CCAAGGTCCTCTCCTCCCTAGAGGGGAGGTGGAGCAGCAGTTGACTCCTGGTTCCCTCCCTATTTCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR GCA 72 bp | GGTGGGGGAGCTTGCCAGTGTGTCTCTTGTTCAGTGTaGTTACCTGCAGCCTGCCCGCTTCGCTACTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GGGACQCVSCSV*LPAACPLRYSL Trigger: GAGAGAGTAGCGAAGCGGGCAGGCTGCAGGTAAGCACACTGAACAAGAGACACACTGGCAAGCTCCCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR TCA 72 bp | CAGGACTGGGCTGAGCTGTTCGCTTTCTGCTCTCGCTaGGGTGGGGGAGCTTGCCAGTGTGTCTCTTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: QDWAELFAFCSR*GGGACQCVSCS Trigger: TGAACAAGAGACACACTGGCAAGCTCCCCCACCTCAGCGAGAGCAGAAAGCGAACAGCTCAGCCCAGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR GCA 72 bp | ATCCAGGCTGAAATAGGGAGGGAACCAGGAGTCAACTaGTGCTCCACCTCCCCTCTAGGGAGGAGAGGACCT | + |
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Preference number: 3 (lower is better) Translates to: IQAEIGREPGVN*CSTSPLGRRGP Trigger: AGGTCCTCTCCTCCCTAGAGGGGAGGTGGAGCAGCAGTTGACTCCTGGTTCCCTCCCTATTTCAGCCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR GCA 72 bp | CAGTGTGTCTCTTGTTCAGTGTGCTTACCTGCAGCCTaGCCGCTTCGCTACTCTCTCTCTGGCTGGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: QCVSCSVCLPAA*PLRYSLSGWLA Trigger: AGCCAGCCAGCCAGAGAGAGAGTAGCGAAGCGGGCAGGCTGCAGGTAAGCACACTGAACAAGAGACACACTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR GCA 72 bp | CCCGCTTCGCTACTCTCTCTCTGGCTGGCTGGCTTTTaGCTTCCTTGGAGGATCTGGCTACTAAAGCACATT | + |
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Preference number: 3 (lower is better) Translates to: PASLLSLWLAGF*LPWRIWLLKHI Trigger: AATGTGCTTTAGTAGCCAGATCCTCCAAGGAAGGCAAAAGCCAGCCAGCCAGAGAGAGAGTAGCGAAGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCAAACTTCGCCCAGTCTaGCCTGGACATCCAGGTATG | + |
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Preference number: 3 (lower is better) Translates to: MPTSRSAYHNFDSVCAKVKLRPV*PGHPGM Trigger: CATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTT...GACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR GCA 72 bp | CTAAACAAAGGGCCACTCAGAAACTTCGCCCAGTCTTaGCTGGACATCCAGGTATGCTCTCATAGTGAGACG | + |
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Preference number: 3 (lower is better) Translates to: LNKGPLRNFAQS*LDIQVCSHSET Trigger: CGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTGTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| 3UTR GCA 72 bp | GACATCAGCAACGCGGACAGAAGAGTAATTAGCCAGTaGCCTTGTGAGACACTGACTTGCTGGGAATCGAGT | + |
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Preference number: 3 (lower is better) Translates to: DISNADRRVISQ*PCETLTCWESS Trigger: ACTCGATTCCCAGCAAGTCAGTGTCTCACAAGGGCACTGGCTAATTACTCTTCTGTCCGCGTTGCTGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
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| 3UTR CCA 72 bp | ATGGGGACAGAGTGTGAGGCTGTTTGGTTTTCCCAATaGGTGAGAAGAAGGCCACGAACCACATATGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MGTECEAVWFSQ*VRRRPRTTYAE Trigger: CTCTGCATATGTGGTTCGTGGCCTTCTTCTCACCCATTGGGAAAACCAAACAGCCTCACACTCTGTCCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATCTTCGCTGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTAAAGCCAGAGCTGGATaGCAGAAAGCTCCGGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSLGYLLLGIIGAELYPKARAG*QKAPGC Trigger: GCAACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTT...AGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCAGCGAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| 3UTR TCA 72 bp | TTGTCTTATATTACAGCAGGTAGCCGATGGGTGAGATaGGATGTGTCAACCCTCAATCCAAGTGTGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: LSYITAGSRWVR*DVSTLNPSVPP Trigger: AGGTGGCACACTTGGATTGAGGGTTGACACATCTCATCTCACCCATCGGCTACCTGCTGTAATATAAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| 3UTR GCA 72 bp | AGAGTAATTAGCCAGTGCCCTTGTGAGACACTGACTTaGTGGGAATCGAGTCTCTCTCTCTCTTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RVISQCPCETLT*WESSLSLSLLL Trigger: CAACAACAAAGAGAGAGAGAGACTCGATTCCCAGCAAGTCAGTGTCTCACAAGGGCACTGGCTAATTACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| 3UTR CCA 72 bp | CTCATTGTAATAAATGTCGCGTTCAGTGCCTCACACTaGCTGTGCCTTAAGTACCAAATTTATAAACGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LIVINVAFSASH*LCLKYQIYKRN Trigger: GTTACGTTTATAAATTTGGTACTTAAGGCACAGCCAGTGTGAGGCACTGAACGCGACATTTATTACAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| 3UTR TCA 72 bp | TTGTCGTGTGAAGATGCTTCTGCGCTATCCCGTCTGTaGATGTCTACATTAGTCTACTTGTTAGTAAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: LSCEDASALSRL*MSTLVYLLVKF Trigger: AAATTTTACTAACAAGTAGACTAATGTAGACATTCACAGACGGGATAGCGCAGAAGCATCTTCACACGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| 3UTR GCA 72 bp | GTAATAAATGTCGCGTTCAGTGCCTCACACTGGCTGTaGCTTAAGTACCAAATTTATAAACGTAACAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: VINVAFSASHWL*LKYQIYKRNNL Trigger: TAAATTGTTACGTTTATAAATTTGGTACTTAAGGCACAGCCAGTGTGAGGCACTGAACGCGACATTTATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| 3UTR TCA 72 bp | AGCCGCCATTTGAACATTGTGAGACCTTGGGTTAGTTaGAACCACATCAAATCAGCAAAAATAAAAGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRHLNIVRPWVS*NHIKSAKIKVN Trigger: ATTTACTTTTATTTTTGCTGATTTGATGTGGTTTCAACTAACCCAAGGTCTCACAATGTTCAAATGGCGGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TCCACGCCTGACCCACGGGTTCCCCCGTCTGGGGACAGGGTGAAGAGAGAGGCAGCTGCCCGAGGTGCCTaGGCTCCCATTTGCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: STPDPRVPPSGDRVKREAAARGA*APICLH Trigger: ATGGAGGCAAATGGGAGCCCAGGCACCTCGGGCAGC...TGCCTCTCTCTTCACCCTGTCCCCAGACGGGGGAACCCGTGGGTCAGGCGTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGGGCTGGGGACAGGACATCAGCAACGCGGACAGAAGAGTAATTAGCCAGGGGAGTCGTTGGCGCTaGCCGAGGTGCCTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRGWGQDISNADRRVISQGSRWR*PRCLGS Trigger: GGAGCCCAGGCACCTCGGGCAGCGCCAACGACTCCC...CTGGCTAATTACTCTTCTGTCCGCGTTGCTGATGTCCTGTCCCCAGCCCCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAAGCGCCTGCAGGTCCTGGGCTGTTaGCCCCCGGGAAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWTSRYALIVRRQWKRLQVLGC*PPGSLR Trigger: CCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTG...CAGGCGCTTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAGGGAGTCGTTGGCGCTaGCCGAGGTGCCTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCPPPAPRITTSIQCVLGSRWR*PRCLGS Trigger: GGAGCCCAGGCACCTCGGGCAGCGCCAACGACTCCC...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTACAGGTCCTGGGCTGTTaGCCCCCGGGAAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCPPPAPRITTSIQCVLQVLGC*PPGSLR Trigger: CCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTG...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCGCCGGAGCCCGGCTGTaGGCTGGCCGCGCTTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPPPAPRITTSIQCVLKSAGARL*AGRAYV Trigger: TACATAAGCGCGGCCAGCCCACAGCCGGGCTCCGGC...GGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAAGGTCCAGCTATGCCGTaGCCGAAGCCGGAGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQGPAMP*PKPEPG Trigger: GCCGGGCTCCGGCTTCGGCCACGGCATAGCTGGACC...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGCGGGCCGCGCCGGGTTaGAGCCTGATCCTCGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRNFAQSCLDIQVCSHSERAAPG*SLILEP Trigger: CGGCTCGAGGATCAGGCTCCAACCCGGCGCGGCCCG...CTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAAGCGCCTGTGGCGCTGCCCGAGGTaGCTGGGCTCCCATTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAWTSRYALIVRRQWKRLWRCPR*LGSHLP Trigger: AGGCAAATGGGAGCCCAGGCACCTCGGGCAGCGCCA...CAGGCGCTTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TCCACCTCCCCTCTAGGGAGGAGAGGACCTTGGGGTCTCAGGCAGATGGATCTGATTTTACCGGGGTCGTaGTGGGAGTCGTTGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STSPLGRRGPWGLRQMDLILPGS*WESLAL Trigger: CAGCGCCAACGACTCCCAGCACGACCCCGGTAAAAT...CAGATCCATCTGCCTGAGACCCCAAGGTCCTCTCCTCCCTAGAGGGGAGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAACGTGCTGGGAGTCGTTaGCGCTGCCCGAGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQRAGSR*RCPRCL Trigger: CAGGCACCTCGGGCAGCGCCAACGACTCCCAGCACG...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCCAGATCGCATCCATGGTGTATaGCAGCCCCCGGGCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSRSAYHNFDSVCAKVPDRIHGV*QPPGPA Trigger: GGCCGGGCCCGGGGGCTGCCATACACCATGGATGCG...ATCTGGGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATAATCGGCGACAGGTCCTaGGCTGTTGGCCCCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHATQEHTHRLHTGWHSIIGDRS*AVGPRE Trigger: TTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGAT...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | AATCCAAGTGTGCCACCTCTGGTTGGGATGAGGAGTGAGGCTGGTGGGGGTCCAAGCCCGGCTGTGGGCTaGCCGCGCTTATGTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSVPPLVGMRSEAGGGPSPAVG*PRLCNS Trigger: GGAATTACATAAGCGCGGCCAGCCCACAGCCGGGCT...TGGACCCCCACCAGCCTCACTCCTCATCCCAACCAGAGGTGGCACACTTGGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAAGCGCCTGAGCCGCTGCCACAGCTaGCGCTGCCACTGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LAWTSRYALIVRRQWKRLSRCHS*RCHWSI Trigger: TATGGACCAGTGGCAGCGGCAGCTGTGGCAGCGGCT...CAGGCGCTTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | AACGGCTGGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTTGCCCGGACCGTGGTCCATGTaGGTTTCCAGGAGCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NGWGKKSQSWIAESSGLPGPWSM*VSRSLP Trigger: AGGGAGGCTCCTGGAAACGCACATGGACCACGGTCC...GGGCAACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTACTCCGGAGTCCTGGCTaGCAGGGCCGTAGAGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCPPPAPRITTSIQCVLLRSPG*QGRRDR Trigger: CCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAG...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCCACTGGTCCATAAGCTaGCGCCGGGAAGCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPPPAPRITTSIQCVLKSHWSIS*RREAWE Trigger: TTCCCAGGCTTCCCGGCGGCAGCTTATGGACCAGTG...GGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGTTACCGGGGTCGTGCTaGGAGTCGTTGGCGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNFAQSCLDIQVCSHSELPGSC*ESLALP Trigger: GGGCAGCGCCAACGACTCCCAGCACGACCCCGGTAA...CTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAACTCCGGAGTCCTGGCTaGCAGGGCCGTAGAGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SMPTSRSAYHNFDSVCAKLRSPG*QGRRDR Trigger: CCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAG...TTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | ACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGCCGAAGGTCCAGCTATGCCGTaGCCGAAGCCGGAGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: THRKGRPSKHGRPYLIAEGPAMP*PKPEPG Trigger: GCCGGGCTCCGGCTTCGGCCACGGCATAGCTGGACC...TTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR TCA 90 bp | AACGGCTGGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTTGCCCTCTAAGGCTATCTGGTaGGGTCTGCCAGCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NGWGKKSQSWIAESSGLPSKAIW*GLPAQS Trigger: GGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGA...GGGCAACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCATTTTACCGGGGTCGTaGTGGGAGTCGTTGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPPPAPRITTSIQCVLKSILPGS*WESLAL Trigger: CAGCGCCAACGACTCCCAGCACGACCCCGGTAAAAT...GGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGCCACAGCTGCCGCTaGCACTGGTCCATAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQCHSCR*HWSISC Trigger: GCAGCTTATGGACCAGTGGCAGCGGCAGCTGTGGCA...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAAGCCGCTGCCACAGCTaGCGCTGCCACTGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SMPTSRSAYHNFDSVCAKSRCHS*RCHWSI Trigger: TATGGACCAGTGGCAGCGGCAGCTGTGGCAGCGGCT...TTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAAGCGCCTGTCTAAGGCTATCTGGTaGGGTCTGCCAGCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAWTSRYALIVRRQWKRLSKAIW*GLPAQS Trigger: GGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGA...CAGGCGCTTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAACACTGGTCCATAAGCTaGCGCCGGGAAGCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SMPTSRSAYHNFDSVCAKHWSIS*RREAWE Trigger: TTCCCAGGCTTCCCGGCGGCAGCTTATGGACCAGTG...TTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | ACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGCCGAATTACCGGGGTCGTGCTaGGAGTCGTTGGCGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: THRKGRPSKHGRPYLIAELPGSC*ESLALP Trigger: GGGCAGCGCCAACGACTCCCAGCACGACCCCGGTAA...TTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAAGCCCGGCTGTGGGCTaGCCGCGCTTATGTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMPTSRSAYHNFDSVCAKSPAVG*PRLCNS Trigger: GGAATTACATAAGCGCGGCCAGCCCACAGCCGGGCT...TTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCGCTGCCCGAGGTGCCTaGGCTCCCATTTGCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ANCMSLLQHKIESMPTSRAARGA*APICLH Trigger: ATGGAGGCAAATGGGAGCCCAGGCACCTCGGGCAGC...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTTCGCTGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTGGGAGTCGTTGGCGCTaGCCGAGGTGCCTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLGYLLLGIIGAELYPGSRWR*PRCLGS Trigger: GGAGCCCAGGCACCTCGGGCAGCGCCAACGACTCCC...AGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCAGCGAAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCTACACTTGCTGGGTCTaGGAAGGTGACGAAACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPPPAPRITTSIQCVLKSYTCWV*EGDETE Trigger: TTCGGTTTCGTCACCTTCGCAGACCCAGCAAGTGTA...GGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATATACACTTGCTGGGTCTaGGAAGGTGACGAAACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHATQEHTHRLHTGWHSIYTCWV*EGDETE Trigger: TTCGGTTTCGTCACCTTCGCAGACCCAGCAAGTGTA...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACGCTACTCAAGAGCACACTCACAGACTCCACACAGGGTGGCACAGTATAAAGCCAAACCCTCTGTaGCTGTTGGTGGTTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AHATQEHTHRLHTGWHSIKPNPL*LLVVLS Trigger: CGACAAAACCACCAACAGGCACAGAGGGTTTGGCTT...TATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGCGTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAAATCCGGGGTAGCCTCTaGCATAGGTTGCCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQIRGSL*HRLPQS Trigger: ACTTTGTGGCAACCTATGGCAGAGGCTACCCCGGAT...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCTCAAAGGTCCAGCTATaGCGTGGCCGAAGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ANCMSLLQHKIESMPTSRSKVQL*RGRSRS Trigger: GCTCCGGCTTCGGCCACGGCATAGCTGGACCTTTGA...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGCGTGCTGGGAGTCGTTaGCGCTGCCCGAGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVIYCSALLVLNCILFAVRAGSR*RCPRCL Trigger: CAGGCACCTCGGGCAGCGCCAACGACTCCCAGCACG...CACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAGCCTCTTGTCCCAGGTaGGAACATGACTTCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCPPPAPRITTSIQCVLASCPR*EHDFFR Trigger: CCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGC...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGTGGCGCTGCCCGAGGTaGCTGGGCTCCCATTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVIYCSALLVLNCILFAVWRCPR*LGSHLP Trigger: AGGCAAATGGGAGCCCAGGCACCTCGGGCAGCGCCA...CACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCCAGATCTATCTGGTGAGGTCTaGCAGCTCAGTCCACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: TSRSAYHNFDSVCAKVPDLSGEV*QLSPPI Trigger: TATCGGTGGACTGAGCTGGCAGACCTCACCAGATAG...ATCTGGGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGAACGGCTGGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTTACACTTGCTGGGTCTaGGAAGGTGACGAAACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERTAGVRKARAGLQKAPGYTCWV*EGDETE Trigger: TTCGGTTTCGTCACCTTCGCAGACCCAGCAAGTGTA...ACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | TCCACCTCCCCTCTAGGGAGGAGAGGACCTTGGGGTCTCAGGCAGATGGATCTGTCTACCTTGCCAAACTaGTCGAAATACTGCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: STSPLGRRGPWGLRQMDLSTLPN*SKYCFT Trigger: TGTAAAGCAGTATTTCGAGCAGTTTGGCAAGGTAGA...CAGATCCATCTGCCTGAGACCCCAAGGTCCTCTCCTCCCTAGAGGGGAGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAAAAGCCAAACCCTCTGTaGCTGTTGGTGGTTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQKPNPL*LLVVLS Trigger: CGACAAAACCACCAACAGGCACAGAGGGTTTGGCTT...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGAAACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGATCCGGGGTAGCCTCTaGCATAGGTTGCCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRNFAQSCLDIQVCSHSEIRGSL*HRLPQS Trigger: ACTTTGTGGCAACCTATGGCAGAGGCTACCCCGGAT...CTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGTTACCGGGGTCGTGCTaGGAGTCGTTGGCGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WVIYCSALLVLNCILFAVLPGSC*ESLALP Trigger: GGGCAGCGCCAACGACTCCCAGCACGACCCCGGTAA...CACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR TCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCTCTAAGGCTATCTGGTaGGGTCTGCCAGCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANCMSLLQHKIESMPTSRSKAIW*GLPAQS Trigger: GGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGA...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGAACGGCTGGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTCGCTCGACGAGGAAATaGAACTTTTGGGTCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: ERTAGVRKARAGLQKAPGRSTRK*NFWVNR Trigger: ACGATTGACCCAAAAGTTGCATTTCCTCGTCGAGCG...ACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | AATCCAAGTGTGCCACCTCTGGTTGGGATGAGGAGTGAGGCTGGTGGGGGTCCAATTTGTAAAGGCCGTTaGAATCAAAGGTCCAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NPSVPPLVGMRSEAGGGPICKGR*NQRSSY Trigger: ATAGCTGGACCTTTGATTGCAACGGCCTTTACAAAT...TGGACCCCCACCAGCCTCACTCCTCATCCCAACCAGAGGTGGCACACTTGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | CATCTTCGCTGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCGCTGCCCGAGGTGCCTaGGCTCCCATTTGCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLRWVIYCSALLVLNCILAARGA*APICLH Trigger: ATGGAGGCAAATGGGAGCCCAGGCACCTCGGGCAGC...GAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCAGCGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAAGCGCCTGTTGGGTCAATCGTCTTaGAATCTAACTCATGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWTSRYALIVRRQWKRLLGQSS*NLTHGG Trigger: CCCACCATGAGTTAGATTCCAAGACGATTGACCCAA...CAGGCGCTTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGAATCAAAAGCCGGAGCCCGGCTGTaGGCTGGCCGCGCTTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: WRVTSPSQHPLKARTESKAGARL*AGRAYV Trigger: TACATAAGCGCGGCCAGCCCACAGCCGGGCTCCGGC...TTTTGATTCTGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGGAGGCAGCCCGAGCTTaGACCGTGGTCCATGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WVIYCSALLVLNCILFAVEAARA*TVVHVR Trigger: ACGCACATGGACCACGGTCCAAGCTCGGGCTGCCTC...CACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR TCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCTCCCAGGTGGGAACATaGCTTCTTTCGGCTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANCMSLLQHKIESMPTSRSQVGT*LLSAEL Trigger: AAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGA...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGCCGAACTATCTGGTGAGGTCTaGCAGCTCAGTCCACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: THRKGRPSKHGRPYLIAELSGEV*QLSPPI Trigger: TATCGGTGGACTGAGCTGGCAGACCTCACCAGATAG...TTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATACTTTATCTACACTTaGTGGGTCTGCGAAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQYFIYT*WVCEGD Trigger: GTCACCTTCGCAGACCCAGCAAGTGTAGATAAAGTA...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | AATCCAAGTGTGCCACCTCTGGTTGGGATGAGGAGTGAGGCTGGTGGGGGTCCAAACTGCTCGAAATACTaGTTTACATCTTCCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: NPSVPPLVGMRSEAGGGPNCSKY*FTSSTT Trigger: AGTAGTGGAAGATGTAAAGCAGTATTTCGAGCAGTT...TGGACCCCCACCAGCCTCACTCCTCATCCCAACCAGAGGTGGCACACTTGGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATCGCATCCTCTACCTTaGCAAACTGCTCGAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQSHPLP*QTARNT Trigger: AGTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGA...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCGCCTCTTGTCCCAGGTaGGAACATGACTTCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ANCMSLLQHKIESMPTSRASCPR*EHDFFR Trigger: CCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGC...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | ATATTAAGCTGGGTGACTACCAGACTAAGTCAAAAATCACTACCAAATGTGATTCGCATCCATGGTGTATaGCAGCCCCCGGGCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSWVTTRLSQKSLPNVIRIHGV*QPPGPA Trigger: GGCCGGGCCCGGGGGCTGCCATACACCATGGATGCG...AATCACATTTGGTAGTGATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGAATCAAAAATCGGCGACAGGTCCTaGGCTGTTGGCCCCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WRVTSPSQHPLKARTESKIGDRS*AVGPRE Trigger: TTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGAT...TTTTGATTCTGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR TCA 90 bp | TTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGAAAGAACTGGGTCTGCGAAGGTaGCGAAACCGAAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLGIIGAELYPLRCEKELGLRR*RNRSLW Trigger: CCAGAGGCTTCGGTTTCGTCACCTTCGCAGACCCAG...TTCTTTCTCACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAACTCATGGTGGGGCTaGCCTAATACTTTATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SLCPPPAPRITTSIQCVLNSWWG*PNTLST Trigger: TGTAGATAAAGTATTAGGTCAGCCCCACCATGAGTT...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGTCCCCATGCCAAGCATaGACGCATCCATGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KALIGKEDPQNTAVLTLLSPCQA*THPWCM Trigger: CATACACCATGGATGCGTTCATGCTTGGCATGGGGA...CAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCCAGATTCGCATCCTCTACCTTaGCAAACTGCTCGAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: TSRSAYHNFDSVCAKVPDSHPLP*QTARNT Trigger: AGTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGA...ATCTGGGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAAAACACGGCCGTCCTTACCTTATTGCCGAAAATAGATATACTTAGGTTATCAAAGGTCCAGCTATaGCGTGGCCGAAGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQNTAVLTLLPKIDILRLSKVQL*RGRSRS Trigger: GCTCCGGCTTCGGCCACGGCATAGCTGGACCTTTGA...TAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR TCA 90 bp | TCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAATGACTTCTTTCGGCTaGGCTTTCTTACATTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: SMPTSRSAYHNFDSVCAKMTSFG*AFLHST Trigger: GGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCAT...TTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTTCGCTGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTATTTTACCGGGGTCGTaGTGGGAGTCGTTGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLGYLLLGIIGAELYPILPGS*WESLAL Trigger: CAGCGCCAACGACTCCCAGCACGACCCCGGTAAAAT...AGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCAGCGAAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGGTGACCATCTTAGGTTaGGCTCGACGAGGAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KALIGKEDPQNTAVLTLLVTILG*ARRGNA Trigger: TGCATTTCCTCGTCGAGCGCAACCTAAGATGGTCAC...CAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAAGCGCCTGAACTGCTCGAAATACTaGTTTACATCTTCCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: LAWTSRYALIVRRQWKRLNCSKY*FTSSTT Trigger: AGTAGTGGAAGATGTAAAGCAGTATTTCGAGCAGTT...CAGGCGCTTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TACCAAAAATGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACATGCCACAGCTGCCGCTaGCACTGGTCCATAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YQKWRVTSPSQHPLKARTCHSCR*HWSISC Trigger: GCAGCTTATGGACCAGTGGCAGCGGCAGCTGTGGCA...TGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCATTTTTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCGCCCAGTCTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAAATTTGTAAAGGCCGTTaGAATCAAAGGTCCAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSLAWTSRYALIVRRQICKGR*NQRSSY Trigger: ATAGCTGGACCTTTGATTGCAACGGCCTTTACAAAT...TTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGCGCTCGACGAGGAAATaGAACTTTTGGGTCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: KALIGKEDPQNTAVLTLLRSTRK*NFWVNR Trigger: ACGATTGACCCAAAAGTTGCATTTCCTCGTCGAGCG...CAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| 3UTR CAA 72 bp | ATGGAATTCCGAGTTTATAACACCATGAATGGCAGATaGGCTAGCCCACGCTACTCAAGAGCACACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MEFRVYNTMNGR*ASPRYSRAHSQ Trigger: CTGTGAGTGTGCTCTTGAGTAGCGTGGGCTAGCCAATCTGCCATTCATGGTGTTATAAACTCGGAATTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAGCTGGGTGACTACCAGACTAAGTCAAAAATCACTACCAAATGTGATTCTGGGTCTGCGAAGGTaGCGAAACCGAAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSWVTTRLSQKSLPNVILGLRR*RNRSLW Trigger: CCAGAGGCTTCGGTTTCGTCACCTTCGCAGACCCAG...AATCACATTTGGTAGTGATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGAAAGAACTATCTGGTGAGGTCTaGCAGCTCAGTCCACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LLLGIIGAELYPLRCEKELSGEV*QLSPPI Trigger: TATCGGTGGACTGAGCTGGCAGACCTCACCAGATAG...TTCTTTCTCACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGAATCAAAAGCCTCTGCCATAGGTTaGCACAAAGTTGGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRVTSPSQHPLKARTESKASAIG*HKVGVA Trigger: GGCTACCCCAACTTTGTGGCAACCTATGGCAGAGGC...TTTTGATTCTGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGTTTATCTACACTTGCTaGGTCTGCGAAGGTGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: KALIGKEDPQNTAVLTLLFIYTC*VCEGDE Trigger: TTCGTCACCTTCGCAGACCCAGCAAGTGTAGATAAA...CAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGAAAGCCAACCTTTTTCTaGTCACCTGAGGCAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VIYCSALLVLNCILFAVRKPTFF*SPEAAR Trigger: TCGGGCTGCCTCAGGTGACCAGAAAAAGGTTGGCTT...TCTCACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGAACTCATGGTGGGGCTaGCCTAATACTTTATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: KALIGKEDPQNTAVLTLLNSWWG*PNTLST Trigger: TGTAGATAAAGTATTAGGTCAGCCCCACCATGAGTT...CAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAAAACACGGCCGTCCTTACCTTATTGCCGAAAATAGATATACTTAGGTTAGTGACCATCTTAGGTTaGGCTCGACGAGGAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQNTAVLTLLPKIDILRLVTILG*ARRGNA Trigger: TGCATTTCCTCGTCGAGCGCAACCTAAGATGGTCAC...TAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACTGTATGTCACTTCTACAACACAAAATAGAGTCTATGCCCACCTCCCGCAGGAAATGCAACTTTTaGGTCAATCGTCTTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ANCMSLLQHKIESMPTSRRKCNF*VNRLGI Trigger: GATTCCAAGACGATTGACCCAAAAGTTGCATTTCCT...GCGGGAGGTGGGCATAGACTCTATTTTGTGTTGTAGAAGTGACATACAGTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAGCTGGGTGACTACCAGACTAAGTCAAAAATCACTACCAAATGTGATTGCCTCTGCCATAGGTTaGCACAAAGTTGGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSWVTTRLSQKSLPNVIASAIG*HKVGVA Trigger: GGCTACCCCAACTTTGTGGCAACCTATGGCAGAGGC...AATCACATTTGGTAGTGATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | CATCTTCGCTGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTTATCTACACTTGCTaGGTCTGCGAAGGTGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLRWVIYCSALLVLNCILFIYTC*VCEGDE Trigger: TTCGTCACCTTCGCAGACCCAGCAAGTGTAGATAAA...GAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCAGCGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTTTGGGTCAATCGTCTTaGAATCTAACTCATGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGYLLLGIIGAELYPLRCLGQSS*NLTHGG Trigger: CCCACCATGAGTTAGATTCCAAGACGATTGACCCAA...ACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR TCA 90 bp | ATATTAAGCTGGGTGACTACCAGACTAAGTCAAAAATCACTACCAAATGTGATTTCCCCATGCCAAGCATaGACGCATCCATGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ILSWVTTRLSQKSLPNVISPCQA*THPWCM Trigger: CATACACCATGGATGCGTTCATGCTTGGCATGGGGA...AATCACATTTGGTAGTGATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGAAAGAATACTTTATCTACACTTaGTGGGTCTGCGAAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGIIGAELYPLRCEKEYFIYT*WVCEGD Trigger: GTCACCTTCGCAGACCCAGCAAGTGTAGATAAAGTA...TTCTTTCTCACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAAAACACGGCCGTCCTTACCTTATTGCCGAAAATAGATATACTTAGGTTATACTTTATCTACACTTaGTGGGTCTGCGAAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQNTAVLTLLPKIDILRLYFIYT*WVCEGD Trigger: GTCACCTTCGCAGACCCAGCAAGTGTAGATAAAGTA...TAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TACCAAAAATGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACACGCTCGACGAGGAAATaGAACTTTTGGGTCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: YQKWRVTSPSQHPLKARTRSTRK*NFWVNR Trigger: ACGATTGACCCAAAAGTTGCATTTCCTCGTCGAGCG...TGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCATTTTTGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR TCA 90 bp | TTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGAAAGAAAACTCATGGTGGGGCTaGCCTAATACTTTATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLGIIGAELYPLRCEKENSWWG*PNTLST Trigger: TGTAGATAAAGTATTAGGTCAGCCCCACCATGAGTT...TTCTTTCTCACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CCA 90 bp | TACCAAAAATGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACATTTATCTACACTTGCTaGGTCTGCGAAGGTGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: YQKWRVTSPSQHPLKARTFIYTC*VCEGDE Trigger: TTCGTCACCTTCGCAGACCCAGCAAGTGTAGATAAA...TGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCATTTTTGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTATTTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGGAAATGCAACTTTTaGGTCAATCGTCTTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: WVIYCSALLVLNCILFAVRKCNF*VNRLGI Trigger: GATTCCAAGACGATTGACCCAAAAGTTGCATTTCCT...CACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAAATAACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| 3UTR CAA 72 bp | AAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATaGCCGAAAATAGATATACTTAGGTTAACAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEDPQNTAVLTL*PKIDILRLTKR Trigger: TCTCTTTGTTAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR GCA 90 bp | TACCAAAAATGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACATCTACCTTGCCAAACTaGTCGAAATACTGCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YQKWRVTSPSQHPLKARTSTLPN*SKYCFT Trigger: TGTAAAGCAGTATTTCGAGCAGTTTGGCAAGGTAGA...TGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCATTTTTGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CCA 90 bp | ATATTAAGCTGGGTGACTACCAGACTAAGTCAAAAATCACTACCAAATGTGATTTTGGGTCAATCGTCTTaGAATCTAACTCATGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSWVTTRLSQKSLPNVILGQSS*NLTHGG Trigger: CCCACCATGAGTTAGATTCCAAGACGATTGACCCAA...AATCACATTTGGTAGTGATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | TCCACCTCCCCTCTAGGGAGGAGAGGACCTTGGGGTCTCAGGCAGATGGATCTGCCGGGCCGCGCCGGGTaGGAGCCTGATCCTCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: STSPLGRRGPWGLRQMDLPGRAG*EPDPRA Trigger: GGCTCGAGGATCAGGCTCCAACCCGGCGCGGCCCGG...CAGATCCATCTGCCTGAGACCCCAAGGTCCTCTCCTCCCTAGAGGGGAGGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS CCA 90 bp | GTGGGCTGGCCGCGCTTATGTAATTCCCCACTCCGGAGTCCTGGCTaGCAGGGCCGTAGAGATCGGCGACAGGTCCTGGGCTGTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGWPRLCNSPLRSPG*QGRRDRRQVLGCWP Trigger: GGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAATTACATAAGCGCGGCCAGCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | AACGGCTGGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTTGCCCTCGTGCTGGGAGTCGTaGGCGCTGCCCGAGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NGWGKKSQSWIAESSGLPSCWES*ALPEVP Trigger: AGGCACCTCGGGCAGCGCCAACGACTCCCAGCACGA...GGGCAACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGGGCTGGGGACAGGACATCAGCAACGCGGACAGAAGAGTAATTAGCCAGTCGTGCTGGGAGTCGTaGGCGCTGCCCGAGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DRGWGQDISNADRRVISQSCWES*ALPEVP Trigger: AGGCACCTCGGGCAGCGCCAACGACTCCCAGCACGA...CTGGCTAATTACTCTTCTGTCCGCGTTGCTGATGTCCTGTCCCCAGCCCCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS CCA 90 bp | AGAGCCGGGAAGAGGGCAGCAGAGTCTGACAAGCCAACCTTTTTCTaGTCACCTGAGGCAGCCCGAGCTTGGACCGTGGTCCATGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RAGKRAAESDKPTFF*SPEAARAWTVVHVR Trigger: ACGCACATGGACCACGGTCCAAGCTCGGGCTGCCTCAGGTGACCAGAAAAAGGTTGGCTTGTCAGACTCTGCTGCCCTCTTCCCGGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CAA 90 bp | AATCCAAGTGTGCCACCTCTGGTTGGGATGAGGAGTGAGGCTGGTGGGGGTCCAAGCCTCTGCCATAGGTaGCCACAAAGTTGGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NPSVPPLVGMRSEAGGGPSLCHR*PQSWGS Trigger: GCTACCCCAACTTTGTGGCAACCTATGGCAGAGGCT...TGGACCCCCACCAGCCTCACTCCTCATCCCAACCAGAGGTGGCACACTTGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | ACTCATAGGAAAGGAAGACCCTCAAAACACGGCCGTCCTTACCTTATTGCCGAATCGTGCTGGGAGTCGTaGGCGCTGCCCGAGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: THRKGRPSKHGRPYLIAESCWES*ALPEVP Trigger: AGGCACCTCGGGCAGCGCCAACGACTCCCAGCACGA...TTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | TCCACGCCTGACCCACGGGTTCCCCCGTCTGGGGACAGGGTGAAGAGAGAGGCAGAGGAAATGCAACTTTaGGGTCAATCGTCTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: STPDPRVPPSGDRVKREAEEMQL*GQSSWN Trigger: ATTCCAAGACGATTGACCCAAAAGTTGCATTTCCTC...TGCCTCTCTCTTCACCCTGTCCCCAGACGGGGGAACCCGTGGGTCAGGCGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107909.8 |
||
| CDS TCA 90 bp | GCTTGGACCGTGGTCCATGTGCGTTTCCAGGAGCCTCCCTGCTCTTaGCTCTTAGGTTGCGCTCGACGAGGAAATGCAACTTTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWTVVHVRFQEPPCS*LLGCARRGNATFGS Trigger: TGACCCAAAAGTTGCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAGCAGGGAGGCTCCTGGAAACGCACATGGACCACGGTCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCCTGGACATCCAGGTATGCTCTCATAGTGAGACGGCAATGGAAGCGCCTGTGTGACCATCTTAGGTaGCGCTCGACGAGGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LAWTSRYALIVRRQWKRLCDHLR*RSTRKC Trigger: GCATTTCCTCGTCGAGCGCAACCTAAGATGGTCACA...CAGGCGCTTCCATTGCCGTCTCACTATGAGAGCATACCTGGATGTCCAGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTATGTGACCATCTTAGGTaGCGCTCGACGAGGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCPPPAPRITTSIQCVLCDHLR*RSTRKC Trigger: GCATTTCCTCGTCGAGCGCAACCTAAGATGGTCACA...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAACGGCTGGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTCTCTTGACTCTTAGGTaGCGCTCGACGAGGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: ERTAGVRKARAGLQKAPGLLTLR*RSTRKC Trigger: GCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAG...ACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCCTTCCACTACTGTGTTaGCAGACAATCCTCCTACGA | + |
|
Preference number: 5 (lower is better) Translates to: CPPPAPRITTSIQCVLKSLPLLC*QTILLR Trigger: TCGTAGGAGGATTGTCTGCAAACACAGTAGTGGAAG...GGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| CDS-3UTR CAA 90 bp | AGTCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTACGCGCCAAAATTCGGTaGAGCACTGTAGCTATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLCPPPAPRITTSIQCVLRAKIR*STVAIQ Trigger: CTGAATAGCTACAGTGCTCAACCGAATTTTGGCGCG...TAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092794.12 |
||
| CDS-3UTR CAA 90 bp | TCTATGCCCACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAATCGCATCCTCTACCTaGCCAAACTGCTCGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SMPTSRSAYHNFDSVCAKIASST*PNCSKY Trigger: GTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGAT...TTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| CDS-3UTR CAA 90 bp | ACCTCCCGCTCCGCGTATCACAACTTCGATTCAGTGTGTGCTAAAGTCCCAGATTTTGGGTCAATCGTCTaGGAATCTAACTCATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRSAYHNFDSVCAKVPDFGSIV*ESNSWW Trigger: CCACCATGAGTTAGATTCCAAGACGATTGACCCAAA...ATCTGGGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAACGGCTGGGGTAAGAAAAGCCAGAGCTGGATTGCAGAAAGCTCCGGGTGAGGAAATGCAACTTTaGGGTCAATCGTCTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERTAGVRKARAGLQKAPGEEMQL*GQSSWN Trigger: ATTCCAAGACGATTGACCCAAAAGTTGCATTTCCTC...ACCCGGAGCTTTCTGCAATCCAGCTCTGGCTTTTCTTACCCCAGCCGTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS TCA 90 bp | GCAACTTTTGGGTCAATCGTCTTGGAATCTAACTCATGGTGGGGCTaGCCTAATACTTTATCTACACTTGCTGGGTCTGCGAAGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: ATFGSIVLESNSWWG*PNTLSTLAGSAKVT Trigger: CGTCACCTTCGCAGACCCAGCAAGTGTAGATAAAGTATTAGGTCAGCCCCACCATGAGTTAGATTCCAAGACGATTGACCCAAAAGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092794.12 ENSMUST00000107908.2 ENSMUST00000107909.8 ENSMUST00000144699.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAAAACACGGCCGTCCTTACCTTATTGCCGAAAATAGATATACTTAGGTTAAGCCTCTGCCATAGGTaGCCACAAAGTTGGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQNTAVLTLLPKIDILRLSLCHR*PQSWGS Trigger: GCTACCCCAACTTTGTGGCAACCTATGGCAGAGGCT...TAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAAAACACGGCCGTCCTTACCTTATTGCCGAAAATAGATATACTTAGGTTACTTCCACTACTGTGTTaGCAGACAATCCTCCTACGA | + |
|
Preference number: 5 (lower is better) Translates to: PQNTAVLTLLPKIDILRLLPLLC*QTILLR Trigger: TCGTAGGAGGATTGTCTGCAAACACAGTAGTGGAAG...TAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | TTATTGCTCGGCATTATTGGTGCTGAATTGTATCCTCTTCGCTGTGAGAAAGAATTTGGGTCAATCGTCTaGGAATCTAACTCATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLGIIGAELYPLRCEKEFGSIV*ESNSWW Trigger: CCACCATGAGTTAGATTCCAAGACGATTGACCCAAA...TTCTTTCTCACAGCGAAGAGGATACAATTCAGCACCAATAATGCCGAGCAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGAATCAAAAATCGCATCCTCTACCTaGCCAAACTGCTCGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: WRVTSPSQHPLKARTESKIASST*PNCSKY Trigger: GTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGAT...TTTTGATTCTGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGTAACATCACCATCTCAGCATCCTTTAAAAGCGAGAACAGAATCAAAAGAGGAAATGCAACTTTaGGGTCAATCGTCTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WRVTSPSQHPLKARTESKEEMQL*GQSSWN Trigger: ATTCCAAGACGATTGACCCAAAAGTTGCATTTCCTC...TTTTGATTCTGTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS GCA 72 bp | CGCTGCCACAGCTGCCGCTGCCACTGGTCCATAAGCTaGCGCCGGGAAGCCTGGGAACTGGTAGCCATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RCHSCRCHWSIS*RREAWELVAIA Trigger: AGCTATGGCTACCAGTTCCCAGGCTTCCCGGCGGCAGCTTATGGACCAGTGGCAGCGGCAGCTGTGGCAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS CCA 72 bp | CCGCGCTTATGTAATTCCCCACTCCGGAGTCCTGGCTaGCAGGGCCGTAGAGATCGGCGACAGGTCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRLCNSPLRSPG*QGRRDRRQVLG Trigger: GCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAATTACATAAGCGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
||
| CDS CAA 72 bp | CCGATAAACATTTTACCGGGGTCGTGCTGGGAGTCGTaGGCGCTGCCCGAGGTGCCTGGGCTCCCATTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PINILPGSCWES*ALPEVPGLPFA Trigger: GGCAAATGGGAGCCCAGGCACCTCGGGCAGCGCCAACGACTCCCAGCACGACCCCGGTAAAATGTTTATCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092794.12 ENSMUST00000107908.2 ENSMUST00000107909.8 |
||
| CDS CCA 72 bp | CCAACCTTTTTCTGGTCACCTGAGGCAGCCCGAGCTTaGACCGTGGTCCATGTGCGTTTCCAGGAGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PTFFWSPEAARA*TVVHVRFQEPP Trigger: GGGAGGCTCCTGGAAACGCACATGGACCACGGTCCAAGCTCGGGCTGCCTCAGGTGACCAGAAAAAGGTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS CCA 72 bp | TTTTCTGGTCACCTGAGGCAGCCCGAGCTTGGACCGTaGTCCATGTGCGTTTCCAGGAGCCTCCCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FSGHLRQPELGP*SMCVSRSLPAL Trigger: AAGAGCAGGGAGGCTCCTGGAAACGCACATGGACCACGGTCCAAGCTCGGGCTGCCTCAGGTGACCAGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS CCA 72 bp | AAGAGGGCAGCAGAGTCTGACAAGCCAACCTTTTTCTaGTCACCTGAGGCAGCCCGAGCTTGGACCGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KRAAESDKPTFF*SPEAARAWTVV Trigger: GACCACGGTCCAAGCTCGGGCTGCCTCAGGTGACCAGAAAAAGGTTGGCTTGTCAGACTCTGCTGCCCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS CAA 72 bp | CGTGGTCCATGTGCGTTTCCAGGAGCCTCCCTGCTCTaGACTCTTAGGTTGCGCTCGACGAGGAAATGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGPCAFPGASLL*TLRLRSTRKCN Trigger: GTTGCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAGCAGGGAGGCTCCTGGAAACGCACATGGACCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS CAA 90 bp | AGCTTGGACCGTGGTCCATGTGCGTTTCCAGGAGCCTCCCTGCTCTaGACTCTTAGGTTGCGCTCGACGAGGAAATGCAACTTTTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLDRGPCAFPGASLL*TLRLRSTRKCNFWV Trigger: GACCCAAAAGTTGCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAGCAGGGAGGCTCCTGGAAACGCACATGGACCACGGTCCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS CAA 90 bp | GGTCCATGTGCGTTTCCAGGAGCCTCCCTGCTCTTGACTCTTAGGTaGCGCTCGACGAGGAAATGCAACTTTTGGGTCAATCGTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPCAFPGASLLLTLR*RSTRKCNFWVNRLG Trigger: TCCAAGACGATTGACCCAAAAGTTGCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAGCAGGGAGGCTCCTGGAAACGCACATGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
||
| CDS CAA 72 bp | GCGTTTCCAGGAGCCTCCCTGCTCTTGACTCTTAGGTaGCGCTCGACGAGGAAATGCAACTTTTGGGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: AFPGASLLLTLR*RSTRKCNFWVN Trigger: ATTGACCCAAAAGTTGCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAGCAGGGAGGCTCCTGGAAACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107908.2 |
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| CDS TCA 72 bp | CTAATACTTTATCTACACTTGCTGGGTCTGCGAAGGTaGCGAAACCGAAGCCTCTGGAGCGTTTCGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LILYLHLLGLRR*RNRSLWSVSLW Trigger: CCACAACGAAACGCTCCAGAGGCTTCGGTTTCGTCACCTTCGCAGACCCAGCAAGTGTAGATAAAGTATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092794.12 ENSMUST00000107908.2 ENSMUST00000107909.8 ENSMUST00000144699.8 |
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| CDS TCA 72 bp | GGGTCAATCGTCTTGGAATCTAACTCATGGTGGGGCTaGCCTAATACTTTATCTACACTTGCTGGGTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: GSIVLESNSWWG*PNTLSTLAGSA Trigger: CGCAGACCCAGCAAGTGTAGATAAAGTATTAGGTCAGCCCCACCATGAGTTAGATTCCAAGACGATTGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092794.12 ENSMUST00000107908.2 ENSMUST00000107909.8 ENSMUST00000144699.8 |
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| CDS GCA 72 bp | TCGAACATCAGCATCGCATCCTCTACCTTGCCAAACTaGTCGAAATACTGCTTTACATCTTCCACTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SNISIASSTLPN*SKYCFTSSTTV Trigger: CACAGTAGTGGAAGATGTAAAGCAGTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGATGCTGATGTTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 |
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| CDS CAA 72 bp | GCTCGAAATACTGCTTTACATCTTCCACTACTGTGTTaGCAGACAATCCTCCTACGAAGATTTTCTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: ARNTALHLPLLC*QTILLRRFSLF Trigger: GAACAAAGAAAATCTTCGTAGGAGGATTGTCTGCAAACACAGTAGTGGAAGATGTAAAGCAGTATTTCGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 ENSMUST00000144699.8 |
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| CDS GCA 72 bp | CTCGAAATACTGCTTTACATCTTCCACTACTGTGTTTaGAGACAATCCTCCTACGAAGATTTTCTTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LEILLYIFHYCV*RQSSYEDFLCS Trigger: AGAACAAAGAAAATCTTCGTAGGAGGATTGTCTGCAAACACAGTAGTGGAAGATGTAAAGCAGTATTTCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092794.12 ENSMUST00000107909.8 ENSMUST00000144699.8 |
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