Pregenerated sensors for MSI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054256Ensembl transcript IDs: ENSMUST00000067168.9, ENSMUST00000131079.8, ENSMUST00000136586.6, ENSMUST00000150779.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTaGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCTACCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GLLRRRCPNPLAGSV*SSVSCRLGRSCYLL Trigger: GAGGAGGTAGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR GCA 90 bp | GGACAGGCAGTAGCGGTCCAAGTGGCAGCCAAGGGGCTGGGCTGCTaGGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: GQAVAVQVAAKGLGC*GGGVPIPLLAQSGP Trigger: AGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGACCGCTACTGCCTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR GCA 90 bp | GAAGGACAGAGAGGGGCTGACAGCAGGCACGACTCAGCCCTGCCATaGCAGGTCTCACCTCATGTTCACACCCTGAGCCCCCGTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: EGQRGADSRHDSALP*QVSPHVHTLSPRLP Trigger: GGGGAGACGGGGGCTCAGGGTGTGAACATGAGGTGAGACCTGGCATGGCAGGGCTGAGTCGTGCCTGCTGTCAGCCCCTCTCTGTCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| 3UTR GCA 90 bp | GGAGGGCCTGAGAGTATGGGCCTGCCTGTGGCCAGAGCTGAGGTCTaGAACCTTACAGTAACGGTGTCTGAGGAAGAAGGGTCAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: GGPESMGLPVARAEV*NLTVTVSEEEGSET Trigger: TGTCTCTGACCCTTCTTCCTCAGACACCGTTACTGTAAGGTTGCAGACCTCAGCTCTGGCCACAGGCAGGCCCATACTCTCAGGCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCAGTCAGCTGCAGGCTaGGGCGCTCCTGCTACCTCC | + |
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Preference number: 2 (lower is better) Translates to: WQPRGWAAAAEVSQSPCWQSAAG*GAPATS Trigger: GGAGGTAGCAGGAGCGCCCCAGCCTGCAGCTGACTG...CCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCATGGTCCTCAGTCAGCTaGAGGCTGGGGCGCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SQGAGLLRRRCPNPLAGSWSSVS*RLGRSC Trigger: GCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCA...TGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCCAGTCAGCTGCAGGCTaGGGCGCTCCTGCTACCTCC | + |
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Preference number: 2 (lower is better) Translates to: KWQPRGWAAAAEVSQSPCQSAAG*GAPATS Trigger: GGAGGTAGCAGGAGCGCCCCAGCCTGCAGCTGACTG...GCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGGGGCCAGGAGGGGCCTTTGGAGAGCCAATTCCTTCCCAGCAGTGGCTCTAGTGTCCCAATCCCCTTaGTGGCTCAGTCTGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AGARRGLWRANSFPAVALVSQSP*WLSLVL Trigger: GAGGACCAGACTGAGCCAGCAAGGGGATTGGGACAC...TAGAGCCACTGCTGGGAAGGAATTGGCTCTCCAAAGGCCCCTCCTGGCCCCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGCGAGAGAAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACTGGCAGCCAAGGGGCTaGGCTGCTGCGGCGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: WEREKRQGLNRRLVGEPDWQPRG*AAAAEV Trigger: CACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCA...GTCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTTCTCTCGCTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCAACCTTACAGTAACGGTGTCTGAGGAAGAAGGGTCAGAGACAGGGAGATCCCAATCCCCTTGCTaGCTCAGTCTGGTCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VCNLTVTVSEEEGSETGRSQSPC*LSLVLS Trigger: ACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGA...TCTCCCTGTCTCTGACCCTTCTTCCTCAGACACCGTTACTGTAAGGTTGCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| 3UTR GCA 72 bp | GCAGTAGCGGTCCAAGTGGCAGCCAAGGGGCTGGGCTaGTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: AVAVQVAAKGLG*CGGGVPIPLLA Trigger: AGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGACCGCTACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR CCA 72 bp | CGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTaGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: RRRCPNPLAGSV*SSVSCRLGRSC Trigger: GCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR CCA 72 bp | TGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTaGCTCAGTCTGGTCCTCAGTCAGCTGCAGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: WAAAAEVSQSPC*LSLVLSQLQAG Trigger: CCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGGCCAGGAGGGGCCTTTGGAGAGCCAATTCCTTCCCAGCAGTGGCTCTAGGGGTGTCCCAATCCCCTaGCTGGCTCAGTCTGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: GGQEGPLESQFLPSSGSRGVPIP*LAQSGP Trigger: AGGACCAGACTGAGCCAGCAAGGGGATTGGGACACC...CCTAGAGCCACTGCTGGGAAGGAATTGGCTCTCCAAAGGCCCCTCCTGGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| 3UTR GCA 72 bp | GAGAGTATGGGCCTGCCTGTGGCCAGAGCTGAGGTCTaGAACCTTACAGTAACGGTGTCTGAGGAAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: ESMGLPVARAEV*NLTVTVSEEEG Trigger: CCCTTCTTCCTCAGACACCGTTACTGTAAGGTTGCAGACCTCAGCTCTGGCCACAGGCAGGCCCATACTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | CCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCCCTCGAACTACAGCTaGCGCCGCCGCTGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PRGWAAAAEVSQSPCWLSPSNYS*RRRCRR Trigger: GCGGCGGCAGCGGCGGCGGCAGCTGTAGTTCGAGGG...ACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR TCA 90 bp | GGACAGGCAGTAGCGGTCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAAGACCTGCCCCGGGCTaGGCCTGTCGGGGACATCAC | + |
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Preference number: 4 (lower is better) Translates to: GQAVAVQVAAKGLGCCGGRPAPG*ACRGHH Trigger: GTGATGTCCCCGACAGGCTCAGCCCGGGGCAGGTCT...TCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGACCGCTACTGCCTGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | GTAGCGGTCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAAGCCCCCTGTGCGGCTaGGAGTGGAACCTGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VAVQVAAKGLGCCGGGVPSPLCG*EWNLEG Trigger: CCCCTCCAGGTTCCACTCCCAGCCGCACAGGGGGCT...TGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGACCGCTAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGCCATTCCGTAGGGCATaGCCCGAGACCTGCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RGWAAAAEVSQSPCWLSLPFRRA*PETCPG Trigger: CCCGGGGCAGGTCTCGGGTCATGCCCTACGGAATGG...CAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | GCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCAGTCCCTCGAACTACAGCTaGCGCCGCCGCTGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AAAAEVSQSPCWLSLVLSPSNYS*RRRCRR Trigger: GCGGCGGCAGCGGCGGCGGCAGCTGTAGTTCGAGGG...ACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | GGACAGGCAGTAGCGGTCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGACCCCGGAGTCCTGGTTaGCTGCCCCGTAGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GQAVAVQVAAKGLGCCGGPRSPG*LPRRAQ Trigger: CTGAGCTCTACGGGGCAGCCAACCAGGACTCCGGGG...TCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGACCGCTACTGCCTGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | GTAGCGGTCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCACTGTGCGGCTGGGAGTaGAACCTGGAGGGGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VAVQVAAKGLGCCGGGVPLCGWE*NLEGEP Trigger: TGGCTCCCCCTCCAGGTTCCACTCCCAGCCGCACAG...TGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGACCGCTAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | TCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTAGCCCCCTGTGCGGCTaGGAGTGGAACCTGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SKWQPRGWAAAAEVSQSPSPLCG*EWNLSL Trigger: GAGGGACAGGTTCCACTCCCAGCCGCACAGGGGGCT...AGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067168.9 |
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| CDS-3UTR CCA 90 bp | TCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTCGTAGAGCTCAGCCATaGGGCCGGGGCTTGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SKWQPRGWAAAAEVSQSPRRAQP*GRGLWS Trigger: GGACCACAAGCCCCGGCCCCATGGCTGAGCTCTACG...AGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | GGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTTGGAGTCGAGCTCGTaGCGCGATTGCGCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: GAGLLRRRCPNPLAGSVWLESSS*RDCAST Trigger: AGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAA...CCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | GGACAGGCAGTAGCGGTCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGAGTCCTGGTTGGCTaGCCCGTAGAGCTCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GQAVAVQVAAKGLGCCGGGVLVG*PVELSH Trigger: ATGGCTGAGCTCTACGGGGCAGCCAACCAGGACTCC...TCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGACCGCTACTGCCTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | AAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTCCCCGGAGTCCTGGTTaGCTGCCCCGTAGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KGLGCCGGGVPIPLLAQSPRSPG*LPRRAQ Trigger: CTGAGCTCTACGGGGCAGCCAACCAGGACTCCGGGG...AGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | GGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTGCTGGGAGTGGAACCTaGAGGGGGAGCCATCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GLGCCGGGVPIPLLAQSGAGSGT*RGSHRP Trigger: TGGACGATGGCTCCCCCTCCAGGTTCCACTCCCAGC...ACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | AGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGGAGTCCTGGTTGGCTaGCCCGTAGAGCTCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RGWAAAAEVSQSPCWLSLGVLVG*PVELSH Trigger: ATGGCTGAGCTCTACGGGGCAGCCAACCAGGACTCC...CAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | TGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCCTTCCTGCGTGGTCTaGCAACTGAGTCCTCCGATG | + |
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Preference number: 4 (lower is better) Translates to: WQPRGWAAAAEVSQSPCWPSCVV*QLSPPM Trigger: CATCGGAGGACTCAGTTGGCAGACCACGCAGGAAGG...CCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | AGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGTCGCGCAGCCCTTCCTaGGTGGTCTGCCAACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RGWAAAAEVSQSPCWLSLSRSPS*VVCQLS Trigger: ACTCAGTTGGCAGACCACGCAGGAAGGGCTGCGCGA...CAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | TGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGTTCACCTCCCCGAACTaGCCGAAGTATTCGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WQPRGWAAAAEVSQSPCWFTSPN*PKYSRS Trigger: GCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAA...CCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGGGCTGGCGTAGGTCGTaGCTTGGAACCCTGGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: QVAAKGLGCCGGGVPIPLGWRRS*LGTLGN Trigger: GTTACCCAGGGTTCCAAGCCACGACCTACGCCAGCC...CAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | CCTTGCTGGCTCAGTCTGGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCTACGTAGAGCTCAGCCATaGGGCCGGGGCTTGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PCWLSLVLSQLQAGALLLRRAQP*GRGLWS Trigger: GGACCACAAGCCCCGGCCCCATGGCTGAGCTCTACG...TAGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAGCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGTTCACCTCCCCGAACTaGCCGAAGTATTCGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGWAAAAEVSQSPCWLSLFTSPN*PKYSRS Trigger: GCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAA...CAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | GGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGCGTGGCTTGGAACCCTaGGTAACCCAGCATCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: GAGLLRRRCPNPLAGSVWRGLEP*VTQHPN Trigger: ATTGGGATGCTGGGTTACCCAGGGTTCCAAGCCACG...CCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCGGCTGGCGTAGGTCGTaGCTTGGAACCCTGGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: WAAAAEVSQSPCWLSLVLGWRRS*LGTLGN Trigger: GTTACCCAGGGTTCCAAGCCACGACCTACGCCAGCC...GAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGCTGTGTAACTCCGGCTaGCGTAGGTCGTGGCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGWAAAAEVSQSPCWLSLLCNSG*RRSWLG Trigger: TCCAAGCCACGACCTACGCCAGCCGGAGTTACACAG...CAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | TCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTCTGTGTAACTCCGGCTaGCGTAGGTCGTGGCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SKWQPRGWAAAAEVSQSPLCNSG*RRSWLG Trigger: TCCAAGCCACGACCTACGCCAGCCGGAGTTACACAG...AGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | CCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGTGCGGCTGGGAGTaGAACCTGTCCCTCGAACTA | + |
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Preference number: 4 (lower is better) Translates to: PRGWAAAAEVSQSPCWLSLCGWE*NLSLEL Trigger: TAGTTCGAGGGACAGGTTCCACTCCCAGCCGCACAG...ACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067168.9 |
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| CDS-3UTR CCA 90 bp | GGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTTATCCACCCCCGCCTaGTCCATGAAAGTGACGAAG | + |
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Preference number: 4 (lower is better) Translates to: GAGLLRRRCPNPLAGSVWLSTPA*SMKVTK Trigger: CTTCGTCACTTTCATGGACCAGGCGGGGGTGGATAA...CCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | CCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTTGGGGTCAATTGTTTTaGAGTCGAGCTCGTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: PRGWAAAAEVSQSPCWLSWGQLF*SRARAA Trigger: CGCGGCACGAGCTCGACTCCAAAACAATTGACCCCA...ACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR TCA 90 bp | GGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGCCTCGCTCTCAAACGTaGCAAATCCAAACCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GAGLLRRRCPNPLAGSVWPRSQT*QIQTLC Trigger: ACAGAGGGTTTGGATTTGTCACGTTTGAGAGCGAGG...CCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR TCA 90 bp | GGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTTCCCAATACCCAGCATaGAGGCATCCATTCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GLGCCGGGVPIPLLAQSGSQYPA*RHPFRR Trigger: CCTACGGAATGGATGCCTTCATGCTGGGTATTGGGA...ACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR GCA 90 bp | GCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCAGTAGCTCGTGCCGCGATTaGGCCAGCACTTTATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AAAAEVSQSPCWLSLVLSSSCRD*ASTLST Trigger: GGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCT...ACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGCGAGAGAAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACCATTCCGTAGGGCATaGCCCGAGACCTGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGAREETRSEQEVSRGARPFRRA*PETCPG Trigger: CCCGGGGCAGGTCTCGGGTCATGCCCTACGGAATGG...TCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTTCTCTCGCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGAATCCAAACCCTCTGTaGCTGTTGGTGGTTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAGLLRRRCPNPLAGSVWNPNPL*LLVVLS Trigger: CGACAAAACCACCAACAGGCACAGAGGGTTTGGATT...CCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCTGGCTCAGTCTGGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCTTTATCCACCCCCGCCTaGTCCATGAAAGTGACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLAQSGPQSAAGWGAPALSTPA*SMKVTK Trigger: CTTCGTCACTTTCATGGACCAGGCGGGGGTGGATAA...AGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAGCAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTATCACCTCCTTTGGCTaGGCTTTCTTGCATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PRGWAAAAEVSQSPCWLSITSFG*AFLHST Trigger: GGTGGAATGCAAGAAAGCCCAGCCAAAGGAGGTGAT...ACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCATCACCTCCTTTGGCTaGGCTTTCTTGCATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KWQPRGWAAAAEVSQSPCITSFG*AFLHST Trigger: GGTGGAATGCAAGAAAGCCCAGCCAAAGGAGGTGAT...GCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGCCAGGAGGGGCCTTTGGAGAGCCAATTCCTTCCCAGCAGTGGCTCTAGGCGTGGCTTGGAACCCTaGGTAACCCAGCATCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGQEGPLESQFLPSSGSRRGLEP*VTQHPN Trigger: ATTGGGATGCTGGGTTACCCAGGGTTCCAAGCCACG...CCTAGAGCCACTGCTGGGAAGGAATTGGCTCTCCAAAGGCCCCTCCTGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCCCTCGCTCTCAAACGTaGCAAATCCAAACCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WAAAAEVSQSPCWLSLVLPRSQT*QIQTLC Trigger: ACAGAGGGTTTGGATTTGTCACGTTTGAGAGCGAGG...GAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGCCAGGAGGGGCCTTTGGAGAGCCAATTCCTTCCCAGCAGTGGCTCTAGGAGTGGTACCCATTGGTaGAGGCTGTGGCAATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGQEGPLESQFLPSSGSRSGTHW*RLWQSR Trigger: CCTTGATTGCCACAGCCTTCACCAATGGGTACCACT...CCTAGAGCCACTGCTGGGAAGGAATTGGCTCTCCAAAGGCCCCTCCTGGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGAGGAAAGGCCACCTTaGGGTCAATTGTTTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQGAGLLRRRCPNPLAGSEERPP*GQLFWS Trigger: ACTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTC...TGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTCTCTGTGCCTGTTGGTaGTTTTGTCGAACATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKWQPRGWAAAAEVSQSPLCACW*FCRTSA Trigger: TGCTGATGTTCGACAAAACCACCAACAGGCACAGAG...AGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGCGAGAGAAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGAGCCATCGTCCAGGGGTaGGAGCCTGTCCCTCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VGAREETRSEQEVSRGARAIVQG*EPVPRT Trigger: AGTTCGAGGGACAGGCTCTCACCCCTGGACGATGGC...TCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTTCTCTCGCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGTTGGCTGGGCTTTCTTaGATTCCACCATTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WQPRGWAAAAEVSQSPCWLAGLS*IPPFCC Trigger: ACAACAAAATGGTGGAATGCAAGAAAGCCCAGCCAA...CCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCAGTAATCCAAACCCTCTGTaGCTGTTGGTGGTTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AAAAEVSQSPCWLSLVLSNPNPL*LLVVLS Trigger: CGACAAAACCACCAACAGGCACAGAGGGTTTGGATT...ACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTGGCTCAGTCTGGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCTAGAGGAAAGGCCACCTTaGGGTCAATTGTTTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCWLSLVLSQLQAGALLLEERPP*GQLFWS Trigger: ACTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTC...TAGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | GCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCAGTCTCTGTGCCTGTTGGTaGTTTTGTCGAACATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAAAEVSQSPCWLSLVLSLCACW*FCRTSA Trigger: TGCTGATGTTCGACAAAACCACCAACAGGCACAGAG...ACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGCCACCATTTTGTTGTTaGTTTCATGGAAGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RGWAAAAEVSQSPCWLSLPPFCC*FHGSGS Trigger: AGATCCACTTCCATGAAATCAACAACAAAATGGTGG...CAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCCCACCATTTTGTTGTTaGTTTCATGGAAGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: WAAAAEVSQSPCWLSLVLPPFCC*FHGSGS Trigger: AGATCCACTTCCATGAAATCAACAACAAAATGGTGG...GAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR GCA 90 bp | GCGAGAGAAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACATGAGAGCTCGTGCCGCGATTaGGCCAGCACTTTATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AREETRSEQEVSRGARHESSCRD*ASTLST Trigger: GGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCT...CTCATGTCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTTCTCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | TGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGTTGTTGTTGATTTCATaGAAGTGGATCTCACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: WQPRGWAAAAEVSQSPCWLLLIS*KWISQT Trigger: AGTTTGTGAGATCCACTTCCATGAAATCAACAACAA...CCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACATGAGGGGGCTGTCCCAATACCCAGCATaGAGGCATCCATTCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRQGLNRRLVGEPDMRGLSQYPA*RHPFRR Trigger: CCTACGGAATGGATGCCTTCATGCTGGGTATTGGGA...CAGCCCCCTCATGTCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGCGAGAGAAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGAAGTGGTACCCATTGGTaGAGGCTGTGGCAATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGAREETRSEQEVSRGARSGTHW*RLWQSR Trigger: CCTTGATTGCCACAGCCTTCACCAATGGGTACCACT...TCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTTCTCTCGCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGACCGGAGGAGAGGGCAGATCTGGTGTGGGGGTAGGGCAACTGGCTAATTTGTTGTTGATTTCATaGAAGTGGATCTCACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GQTGGEGRSGVGVGQLANLLLIS*KWISQT Trigger: AGTTTGTGAGATCCACTTCCATGAAATCAACAACAA...ATTAGCCAGTTGCCCTACCCCCACACCAGATCTGCCCTCTCCTCCGGTCTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACATGAGGGGGCTGTTGGCTGGGCTTTCTTaGATTCCACCATTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRQGLNRRLVGEPDMRGLLAGLS*IPPFCC Trigger: ACAACAAAATGGTGGAATGCAAGAAAGCCCAGCCAA...CAGCCCCCTCATGTCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS TCA 90 bp | GTGCGGCTGGGAGTGGAACCTGGAGGGGGAGCCATCGTCCAGGGGTaGGAGCCTGTCCCTCGAACTACAGCTGCCGCCGCCGCTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRLGVEPGGGAIVQG*EPVPRTTAAAAAAA Trigger: GGCGGCAGCGGCGGCGGCAGCTGTAGTTCGAGGGACAGGCTCTCACCCCTGGACGATGGCTCCCCCTCCAGGTTCCACTCCCAGCCGCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136586.6 ENSMUST00000150779.8 |
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| CDS-3UTR CAA 90 bp | CCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCCATGGGGCCGGGGCTaGTGGTCCCTAGGAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRGWAAAAEVSQSPCWLSPWGRG*WSLGSP Trigger: GGGGCTTCCTAGGGACCACAAGCCCCGGCCCCATGG...ACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGGCAGCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCCATGGGGCCGGGGCTaGTGGTCCCTAGGAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QVAAKGLGCCGGGVPIPLPWGRG*WSLGSP Trigger: GGGGCTTCCTAGGGACCACAAGCCCCGGCCCCATGG...CAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGCTGCCACTTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CAA 90 bp | GCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGGGCGTAGGTCGTGGCTaGGAACCCTGGGTAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AKGLGCCGGGVPIPLLAQGVGRG*EPWVTQ Trigger: CTGGGTTACCCAGGGTTCCAAGCCACGACCTACGCC...CTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGGAGCTCGTGCCGCGATaGCGCCAGCACTTTATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AKGLGCCGGGVPIPLLAQELVPR*RQHFIH Trigger: GTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTC...CTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGGCGTAGGTCGTGGCTaGGAACCCTGGGTAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGWAAAAEVSQSPCWLSLGVGRG*EPWVTQ Trigger: CTGGGTTACCCAGGGTTCCAAGCCACGACCTACGCC...CAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS CCA 90 bp | GGGCCCATAAGCCGTGAGAGGGATAGCTGTGAGCTCGGGGAGGACTaGGGCGCTCGGGAGAGGGCTCCGCTCTACACGGAATTCGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPISRERDSCELGED*GARERAPLYTEFGE Trigger: TTCCCCGAATTCCGTGTAGAGCGGAGCCCTCTCCCGAGCGCCCCAGTCCTCCCCGAGCTCACAGCTATCCCTCTCACGGCTTATGGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCAGTCTGGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCTACCTCCGAGCTCGTGCCGCGATaGCGCCAGCACTTTATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAQSGPQSAAGWGAPATSELVPR*RQHFIH Trigger: GTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTC...GGAGGTAGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTTGGGGTCAATTGTTTaGGAGTCGAGCTCGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGLLRRRCPNPLAGSVWLGSIV*ESSSCR Trigger: GCGGCACGAGCTCGACTCCAAAACAATTGACCCCAA...CCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCAAACCCCTGGATCTTTaGGTCAGGGGGTCCCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: WAAAAEVSQSPCWLSLVLKPLDL*VRGSRI Trigger: GATGCGGGACCCCCTGACCAAAAGATCCAGGGGTTT...GAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS CCA 90 bp | GTCAGGGGGTCCCGCATCACCAGACACTCTTTCACCTCCCCGAACTaGCCGAAGTATTCGCGCAGCCCTTCCTGCGTGGTCTGCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VRGSRITRHSFTSPN*PKYSRSPSCVVCQL Trigger: CAGTTGGCAGACCACGCAGGAAGGGCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAAAGAGTGTCTGGTGATGCGGGACCCCCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGGCTGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTCCACCTTGGGGTCAATaGTTTTGGAGTCGAGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KGLGCCGGGVPIPLLAQSPPWGQ*FWSRAR Trigger: ACGAGCTCGACTCCAAAACAATTGACCCCAAGGTGG...AGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCAGCCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCAGTCTGGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCTACCTCCCGAGGAAAGGCCACCTaGGGGTCAATTGTTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAQSGPQSAAGWGAPATSRGKAT*GSIVLE Trigger: CTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTCG...GGAGGTAGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS CCA 90 bp | GGAACTGGTAGGTGTAACCAGGGGCAAGGCCTGTGTAACTCCGGCTaGCGTAGGTCGTGGCTTGGAACCCTGGGTAACCCAGCATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTGRCNQGQGLCNSG*RRSWLGTLGNPASQ Trigger: TTGGGATGCTGGGTTACCCAGGGTTCCAAGCCACGACCTACGCCAGCCGGAGTTACACAGGCCTTGCCCCTGGTTACACCTACCAGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000136586.6 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCAGTGGGACATCACCTCCTTaGGCTGGGCTTTCTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAEVSQSPCWLSLVLSGTSPP*AGLSCI Trigger: AATGCAAGAAAGCCCAGCCAAAGGAGGTGATGTCCC...ACTGAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | GCGGGGGCCAGGAGGGGCCTTTGGAGAGCCAATTCCTTCCCAGCAGTGGCTCTAGGGACATCACCTCCTTaGGCTGGGCTTTCTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: AGARRGLWRANSFPAVALGTSPP*AGLSCI Trigger: AATGCAAGAAAGCCCAGCCAAAGGAGGTGATGTCCC...TAGAGCCACTGCTGGGAAGGAATTGGCTCTCCAAAGGCCCCTCCTGGCCCCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTGCTGGCTCAGTCTGGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCTTTTGGCTGGGCTTTCTaGCATTCCACCATTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLAQSGPQSAAGWGAPAFGWAF*HSTILL Trigger: CAACAAAATGGTGGAATGCAAGAAAGCCCAGCCAAA...AGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCAGACTGAGCCAGCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGCTGCGGCGGAGGTGTCCCAATCCCCTTGCTGGCTCAGTCTGGTCCTCTTTGGCTGGGCTTTCTaGCATTCCACCATTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WAAAAEVSQSPCWLSLVLFGWAF*HSTILL Trigger: CAACAAAATGGTGGAATGCAAGAAAGCCCAGCCAAA...GAGGACCAGACTGAGCCAGCAAGGGGATTGGGACACCTCCGCCGCAGCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCGAGAGAAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACAAACCCCTGGATCTTTaGGTCAGGGGGTCCCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: WEREKRQGLNRRLVGEPDKPLDL*VRGSRI Trigger: GATGCGGGACCCCCTGACCAAAAGATCCAGGGGTTT...GTCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTTCTCTCGCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCGAGAGAAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACCCACCTTGGGGTCAATaGTTTTGGAGTCGAGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WEREKRQGLNRRLVGEPDPPWGQ*FWSRAR Trigger: ACGAGCTCGACTCCAAAACAATTGACCCCAAGGTGG...GTCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTTCTCTCGCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGACAAGGTCTGAACAGGAGGTTAGTAGGGGAGCCAGACATGAGGGGGCTGCGAGGAAAGGCCACCTaGGGGTCAATTGTTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: KRQGLNRRLVGEPDMRGLRGKAT*GSIVLE Trigger: CTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTCG...CAGCCCCCTCATGTCTGGCTCCCCTACTAACCTCCTGTTCAGACCTTGTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067168.9 ENSMUST00000150779.8 |
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| CDS CCA 90 bp | TTTGGCTGGGCTTTCTTGCATTCCACCATTTTGTTGTTGATTTCATaGAAGTGGATCTCACAAACTTTCTCTACGATGTCCTCGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FGWAFLHSTILLLIS*KWISQTFSTMSSLS Trigger: TGAGAGCGAGGACATCGTAGAGAAAGTTTGTGAGATCCACTTCCATGAAATCAACAACAAAATGGTGGAATGCAAGAAAGCCCAGCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000136586.6 ENSMUST00000150779.8 |
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| CDS TCA 72 bp | GGAGTGGAACCTGGAGGGGGAGCCATCGTCCAGGGGTaGGAGCCTGTCCCTCGAACTACAGCTGCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GVEPGGGAIVQG*EPVPRTTAAAA Trigger: GGCGGCGGCAGCTGTAGTTCGAGGGACAGGCTCTCACCCCTGGACGATGGCTCCCCCTCCAGGTTCCACTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136586.6 ENSMUST00000150779.8 |
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| CDS CAA 72 bp | TGCGTGGTCTGCCAACTGAGTCCTCCGATGAACATCTaGCAGGGGTCGTGCGGCGAGTCCGGGGAGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: CVVCQLSPPMNI*QGSCGESGEAR Trigger: CCTCGCCTCCCCGGACTCGCCGCACGACCCCTGCAAGATGTTCATCGGAGGACTCAGTTGGCAGACCACGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150779.8 |
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| CDS CCA 72 bp | GGGCAAGGCCTGTGTAACTCCGGCTGGCGTAGGTCGTaGCTTGGAACCCTGGGTAACCCAGCATCCCAATAC | + |
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Preference number: 6 (lower is better) Translates to: GQGLCNSGWRRS*LGTLGNPASQY Trigger: GTATTGGGATGCTGGGTTACCCAGGGTTCCAAGCCACGACCTACGCCAGCCGGAGTTACACAGGCCTTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000136586.6 ENSMUST00000150779.8 |
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| CDS CCA 72 bp | AGGTGTAACCAGGGGCAAGGCCTGTGTAACTCCGGCTaGCGTAGGTCGTGGCTTGGAACCCTGGGTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: RCNQGQGLCNSG*RRSWLGTLGNP Trigger: TGGGTTACCCAGGGTTCCAAGCCACGACCTACGCCAGCCGGAGTTACACAGGCCTTGCCCCTGGTTACACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000136586.6 ENSMUST00000150779.8 |
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| CDS GCA 72 bp | GGGTCAATTGTTTTGGAGTCGAGCTCGTGCCGCGATTaGGCCAGCACTTTATCCACCCCCGCCTGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GSIVLESSSCRD*ASTLSTPAWSM Trigger: CATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000150779.8 |
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| CDS CCA 72 bp | TGCCGCGATTGCGCCAGCACTTTATCCACCCCCGCCTaGTCCATGAAAGTGACGAAGCCGAAACCCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: CRDCASTLSTPA*SMKVTKPKPLD Trigger: ATCCAGGGGTTTCGGCTTCGTCACTTTCATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000150779.8 |
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| CDS CAA 72 bp | AAGGCCTGTGTAACTCCGGCTGGCGTAGGTCGTGGCTaGGAACCCTGGGTAACCCAGCATCCCAATACCCAG | + |
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Preference number: 6 (lower is better) Translates to: KACVTPAGVGRG*EPWVTQHPNTQ Trigger: CTGGGTATTGGGATGCTGGGTTACCCAGGGTTCCAAGCCACGACCTACGCCAGCCGGAGTTACACAGGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000136586.6 ENSMUST00000150779.8 |
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| CDS CAA 90 bp | GTCCGAGTGACCATCTTAGGCTGTGCTCTTCGAGGAAAGGCCACCTaGGGGTCAATTGTTTTGGAGTCGAGCTCGTGCCGCGATTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: VRVTILGCALRGKAT*GSIVLESSSCRDCA Trigger: GGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTCGAAGAGCACAGCCTAAGATGGTCACTCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000150779.8 |
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| CDS CCA 72 bp | CTCTTCGAGGAAAGGCCACCTTGGGGTCAATTGTTTTaGAGTCGAGCTCGTGCCGCGATTGCGCCAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: LFEERPPWGQLF*SRARAAIAPAL Trigger: AAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTCGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000150779.8 |
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| CDS CAA 72 bp | ACCATCTTAGGCTGTGCTCTTCGAGGAAAGGCCACCTaGGGGTCAATTGTTTTGGAGTCGAGCTCGTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TILGCALRGKAT*GSIVLESSSCR Trigger: GCGGCACGAGCTCGACTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTCGAAGAGCACAGCCTAAGATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000150779.8 |
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| CDS CCA 72 bp | CGGGCTGAGCCTGTCGGGGACATCACCTCCTTTGGCTaGGCTTTCTTGCATTCCACCATTTTGTTGTTGATT | + |
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Preference number: 6 (lower is better) Translates to: RAEPVGDITSFG*AFLHSTILLLI Trigger: AATCAACAACAAAATGGTGGAATGCAAGAAAGCCCAGCCAAAGGAGGTGATGTCCCCGACAGGCTCAGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000136586.6 ENSMUST00000150779.8 |
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| CDS TCA 72 bp | CACAAACTTTCTCTACGATGTCCTCGCTCTCAAACGTaGCAAATCCAAACCCTCTGTGCCTGTTGGTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: HKLSLRCPRSQT*QIQTLCACWWF Trigger: AAACCACCAACAGGCACAGAGGGTTTGGATTTGTCACGTTTGAGAGCGAGGACATCGTAGAGAAAGTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067168.9 ENSMUST00000131079.8 ENSMUST00000136586.6 ENSMUST00000150779.8 |
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