Pregenerated sensors for MSH6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005370Ensembl transcript IDs: ENSMUST00000005503.5, ENSMUST00000234756.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGCGCGGAGGAGGAGGCCCTCCGCAGCCCTCCGTTGAGATCCTTTaGCTCCGGCGACGAGGCGGATACCGCCGCGGACCGGGACCCGGG | + |
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Preference number: 5 (lower is better) Translates to: LRGGGGPPQPSVEIL*LRRRGGYRRGPGPG Trigger: CCCGGGTCCCGGTCCGCGGCGGTATCCGCCTCGTCGCCGGAGGCAAAGGATCTCAACGGAGGGCTGCGGAGGGCCTCCTCCTCCGCGCAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | GAGGCACGGCCTGCGCGGAGGAGGAGGCCCTCCGCAGCCCTCCGTTaGGATCCTTTGCCTCCGGCGACGAGGCGGATACCGCCGCGGACC | + |
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Preference number: 5 (lower is better) Translates to: EARPARRRRPSAALR*DPLPPATRRIPPRT Trigger: GGTCCGCGGCGGTATCCGCCTCGTCGCCGGAGGCAAAGGATCTCAACGGAGGGCTGCGGAGGGCCTCCTCCTCCGCGCAGGCCGTGCCTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | CAGAGGCAGCGGCACCTTGGCGTGAGGCCTCGGCCGCGGCCTTCTTaGTGTCGCCGAGTGCCGGGGACTTGGGGAAGAAGCTGTACAAGG | + |
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Preference number: 5 (lower is better) Translates to: QRQRHLGVRPRPRPS*CRRVPGTWGRSCTR Trigger: CCTTGTACAGCTTCTTCCCCAAGTCCCCGGCACTCGGCGACACCAAGAAGGCCGCGGCCGAGGCCTCACGCCAAGGTGCCGCTGCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | ACCAAATCACCTGGTGAGAAGTCACAAGAACTGGGAGGCACGGCCTaGGCGGAGGAGGAGGCCCTCCGCAGCCCTCCGTTGAGATCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TKSPGEKSQELGGTA*AEEEALRSPPLRSF Trigger: AAAGGATCTCAACGGAGGGCTGCGGAGGGCCTCCTCCTCCGCGCAGGCCGTGCCTCCCAGTTCTTGTGACTTCTCACCAGGTGATTTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | GAGCAACCATGGCTCTCTTCCGCTTTGGAGCGCCTTTGCCAAAGGTaGCTAGGTCCTCACTATCGCTGTCCCCAACTCCACTGCTCGCGT | + |
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Preference number: 5 (lower is better) Translates to: EQPWLSSALERLCQR*LGPHYRCPQLHCSR Trigger: ACGCGAGCAGTGGAGTTGGGGACAGCGATAGTGAGGACCTAGGCACCTTTGGCAAAGGCGCTCCAAAGCGGAAGAGAGCCATGGTTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | GTCCACCCTGAGCAACCATGGCTCTCTTCCGCTTTGGAGCGCCTTTaGCAAAGGTGCCTAGGTCCTCACTATCGCTGTCCCCAACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: VHPEQPWLSSALERL*QRCLGPHYRCPQLH Trigger: GTGGAGTTGGGGACAGCGATAGTGAGGACCTAGGCACCTTTGGCAAAGGCGCTCCAAAGCGGAAGAGAGCCATGGTTGCTCAGGGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | ACATCGCGCCTCCATCATTTCTGGAGTCTCGGTCTGCTCCACTCGTaGTACCTTATAGCCCTTCTGCACCAAGGAATCCGAGAACCGGCC | + |
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Preference number: 5 (lower is better) Translates to: TSRLHHFWSLGLLHS*YLIALLHQGIREPA Trigger: GGCCGGTTCTCGGATTCCTTGGTGCAGAAGGGCTATAAGGTAGCACGAGTGGAGCAGACCGAGACTCCAGAAATGATGGAGGCGCGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | TGGCTTGAATTCTACATCAGAGCCACCAATGTCACTCTCCGAGTCTaGGATGACCCGTCGCTTCTTGACTTGCCGGCTGCTTCGCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: WLEFYIRATNVTLRV*DDPSLLDLPAASPR Trigger: CCTAGGCGAAGCAGCCGGCAAGTCAAGAAGCGACGGGTCATCTCAGACTCGGAGAGTGACATTGGTGGCTCTGATGTAGAATTCAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | CCGGTCTTCCGAGCCTTCTCATGGTCAAAGGCTGTGTCCCATCGCTaGAGTTCTGCAGTCAGGTCAGGAAAGCGGCCTTTAGGACTTTTT | + |
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Preference number: 5 (lower is better) Translates to: PVFRAFSWSKAVSHR*SSAVRSGKRPLGLF Trigger: AAAAAGTCCTAAAGGCCGCTTTCCTGACCTGACTGCAGAACTGCAGCGATGGGACACAGCCTTTGACCATGAGAAGGCTCGGAAGACCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | CTTGGACACGTGTGCCATTTTCCGACATCGCGCCTCCATCATTTCTaGAGTCTCGGTCTGCTCCACTCGTGCTACCTTATAGCCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LGHVCHFPTSRLHHF*SLGLLHSCYLIALL Trigger: CAGAAGGGCTATAAGGTAGCACGAGTGGAGCAGACCGAGACTCCAGAAATGATGGAGGCGCGATGTCGGAAAATGGCACACGTGTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | GGGGCACAGAGCCACTGTTTTAAGAGCCGCTTGCCAAAGGGCGTATaGCAAGTATCCAATCTCTCTAGCAGGGTCCCTTCAGTAGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GAQSHCFKSRLPKGV*QVSNLSSRVPSVEP Trigger: TGGCTCTACTGAAGGGACCCTGCTAGAGAGATTGGATACTTGCCATACGCCCTTTGGCAAGCGGCTCTTAAAACAGTGGCTCTGTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | AACCCTGCTTTTGGAGTGATGAGTCCGGTCTTCCGAGCCTTCTCATaGTCAAAGGCTGTGTCCCATCGCTGCAGTTCTGCAGTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: NPAFGVMSPVFRAFS*SKAVSHRCSSAVRS Trigger: TGACCTGACTGCAGAACTGCAGCGATGGGACACAGCCTTTGACCATGAGAAGGCTCGGAAGACCGGACTCATCACTCCAAAAGCAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | CGTGATACCAAACAGTGGGTCCACTACTGTCGTTACCTCCTCCACTaGCGTGGGTCTGGGATTCAGAATTCTGAGGGGCAGAAAAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: RDTKQWVHYCRYLLH*RGSGIQNSEGQKKR Trigger: GCGCTTTTTCTGCCCCTCAGAATTCTGAATCCCAGACCCACGTCAGTGGAGGAGGTAACGACAGTAGTGGACCCACTGTTTGGTATCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | GCTGAGCCTGTTTCCTTCTTCAGACTTTTCCTTCTAAGTCCACCCTaGGCAACCATGGCTCTCTTCCGCTTTGGAGCGCCTTTGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: AEPVSFFRLFLLSPP*ATMALFRFGAPLPK Trigger: CTTTGGCAAAGGCGCTCCAAAGCGGAAGAGAGCCATGGTTGCTCAGGGTGGACTTAGAAGGAAAAGTCTGAAGAAGGAAACAGGCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | GAGAGCCAATTCACTCTCCTCGCCTGGTGTCAACCCAACAGAATCTaGCTCCGAGGTCATTCCTTTAAGCACCAGAGGCAGCACTGTACT | + |
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Preference number: 5 (lower is better) Translates to: ESQFTLLAWCQPNRI*LRGHSFKHQRQHCT Trigger: AGTACAGTGCTGCCTCTGGTGCTTAAAGGAATGACCTCGGAGTCAGATTCTGTTGGGTTGACACCAGGCGAGGAGAGTGAATTGGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | CTTGACTTGCCGGCTGCTTCGCCTAGGCCCCTGAACACTGGGCTGTaGTTCTTCTTCACTCTCGTTGTAATTATCCTCTTCACTCTTATC | + |
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Preference number: 5 (lower is better) Translates to: LDLPAASPRPLNTGL*FFFTLVVIILFTLI Trigger: GATAAGAGTGAAGAGGATAATTACAACGAGAGTGAAGAAGAAGCACAGCCCAGTGTTCAGGGGCCTAGGCGAAGCAGCCGGCAAGTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005503.5 ENSMUST00000234756.2 |
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| CDS GCA 90 bp | CCTGCAAATCTCCCTTCTCACCACTCTATCAAACTTGGACACGTGTaGCATTTTCCGACATCGCGCCTCCATCATTTCTGGAGTCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: PANLPSHHSIKLGHV*HFPTSRLHHFWSLG Trigger: ACCGAGACTCCAGAAATGATGGAGGCGCGATGTCGGAAAATGGCACACGTGTCCAAGTTTGATAGAGTGGTGAGAAGGGAGATTTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | TCCTACCGATTCCCCAGTAGACTATGCTCTTACAGCCAAGCCGACTaGGCTGTTTGTCTAAGTACTCCAGGAGGCTCTGTTCATTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SYRFPSRLCSYSQAD*AVCLSTPGGSVHSL Trigger: GAGAGAATGAACAGAGCCTCCTGGAGTACTTAGACAAACAGCGCAGTCGGCTTGGCTGTAAGAGCATAGTCTACTGGGGAATCGGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | AGGCACAGTAAGACATCCAACACTGCAATGCACTCTACAGCAGACTaGCAGTCCTTGTGGTTCTTGTCGAAGTTACAGAACAAGCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: RHSKTSNTAMHSTAD*QSLWFLSKLQNKRR Trigger: GCGGCGCTTGTTCTGTAACTTCGACAAGAACCACAAGGACTGGCAGTCTGCTGTAGAGTGCATTGCAGTGTTGGATGTCTTACTGTGCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | ACAGTGGCGGTCATCCGAAAACTGGCCGATGAAAAACTTGCCCAGTaGAGTGTCCACAAAGCAAACACCATACACACGAGTGTGACCAGA | + |
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Preference number: 5 (lower is better) Translates to: TVAVIRKLADEKLAQ*SVHKANTIHTSVTR Trigger: TCTGGTCACACTCGTGTGTATGGTGTTTGCTTTGTGGACACTTCACTGGGCAAGTTTTTCATCGGCCAGTTTTCGGATGACCGCCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | CTCTCTGATGTCAGCAAGTGCTTGGTCATAATCAGAGTCAAACCCTaGTTTTGGAGTGATGAGTCCGGTCTTCCGAGCCTTCTCATGGTC | + |
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Preference number: 5 (lower is better) Translates to: LSDVSKCLVIIRVKP*FWSDESGLPSLLMV Trigger: GACCATGAGAAGGCTCGGAAGACCGGACTCATCACTCCAAAAGCAGGGTTTGACTCTGATTATGACCAAGCACTTGCTGACATCAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | GCCACTAGCGTCCTAAATCTGGAACAGTGGCGGTCATCCGAAAACTaGCCGATGAAAAACTTGCCCAGTGAAGTGTCCACAAAGCAAACA | + |
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Preference number: 5 (lower is better) Translates to: ATSVLNLEQWRSSEN*PMKNLPSEVSTKQT Trigger: TGTTTGCTTTGTGGACACTTCACTGGGCAAGTTTTTCATCGGCCAGTTTTCGGATGACCGCCACTGTTCCAGATTTAGGACGCTAGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | GATGTCAGCAAGTGCTTGGTCATAATCAGAGTCAAACCCTGCTTTTaGAGTGATGAGTCCGGTCTTCCGAGCCTTCTCATGGTCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: DVSKCLVIIRVKPCF*SDESGLPSLLMVKG Trigger: GCCTTTGACCATGAGAAGGCTCGGAAGACCGGACTCATCACTCCAAAAGCAGGGTTTGACTCTGATTATGACCAAGCACTTGCTGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | ACATCCAACACTGCAATGCACTCTACAGCAGACTGCCAGTCCTTGTaGTTCTTGTCGAAGTTACAGAACAAGCGCCGCATGCAGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TSNTAMHSTADCQSL*FLSKLQNKRRMQSF Trigger: AAAGGACTGCATGCGGCGCTTGTTCTGTAACTTCGACAAGAACCACAAGGACTGGCAGTCTGCTGTAGAGTGCATTGCAGTGTTGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | GAATCTCTAACTGGTAACGGTTCCTACCGATTCCCCAGTAGACTATaGTCTTACAGCCAAGCCGACTGCGCTGTTTGTCTAAGTACTCCA | + |
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Preference number: 5 (lower is better) Translates to: ESLTGNGSYRFPSRL*SYSQADCAVCLSTP Trigger: TGGAGTACTTAGACAAACAGCGCAGTCGGCTTGGCTGTAAGAGCATAGTCTACTGGGGAATCGGTAGGAACCGTTACCAGTTAGAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | GAGGGGCAGAAAAAGCGCTCAAGGTACTCTTGGTTTCTGAGAGAATaGGAGTTGCTCGTTTGGCTGAGCCTGTTTCCTTCTTCAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: EGQKKRSRYSWFLRE*ELLVWLSLFPSSDF Trigger: AAAGTCTGAAGAAGGAAACAGGCTCAGCCAAACGAGCAACTCCCATTCTCTCAGAAACCAAGAGTACCTTGAGCGCTTTTTCTGCCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 90 bp | GGGATTCAGAATTCTGAGGGGCAGAAAAAGCGCTCAAGGTACTCTTaGTTTCTGAGAGAATGGGAGTTGCTCGTTTGGCTGAGCCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: GIQNSEGQKKRSRYS*FLREWELLVWLSLF Trigger: AAACAGGCTCAGCCAAACGAGCAACTCCCATTCTCTCAGAAACCAAGAGTACCTTGAGCGCTTTTTCTGCCCCTCAGAATTCTGAATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | TTGCTAACCCAGCCCCTTGTTGGGCTGTCATCAAAGAACTGTACATaGACACGGACAGATTTCCCTTTCTTCCGGATGAACGTTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: LLTQPLVGLSSKNCT*TRTDFPFFRMNVPS Trigger: TGATGGAACGTTCATCCGGAAGAAAGGGAAATCTGTCCGTGTTCATGTACAGTTCTTTGATGACAGCCCAACAAGGGGCTGGGTTAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005503.5 ENSMUST00000234756.2 |
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| CDS TCA 90 bp | CAGCCGTGTCTTTACTTAAGGCCTCATCTGCACGTTGCATTGCTCTaGGTATCTCAGACTTTGAACTGTAGAAATGACCTCCCTTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: QPCLYLRPHLHVALL*VSQTLNCRNDLPFG Trigger: CCCAAAAGGGAGGTCATTTCTACAGTTCAAAGTCTGAGATACTCAGAGCAATGCAACGTGCAGATGAGGCCTTAAGTAAAGACACGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005503.5 ENSMUST00000234756.2 |
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| CDS TCA 90 bp | TGCGCTGTTTGTCTAAGTACTCCAGGAGGCTCTGTTCATTCTCTCTaGTGTCAGCAAGTGCTTGGTCATAATCAGAGTCAAACCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: CAVCLSTPGGSVHSL*CQQVLGHNQSQTLL Trigger: AAGCAGGGTTTGACTCTGATTATGACCAAGCACTTGCTGACATCAGAGAGAATGAACAGAGCCTCCTGGAGTACTTAGACAAACAGCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | TCTGTGTCCCTTCTGAATAACCTCCTCCGGGAGATTAGCAAGCCTTaGTGCATTAAAGCCATAGCTCTTAGGACAAGCTCCCTTAATGAA | + |
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Preference number: 5 (lower is better) Translates to: SVSLLNNLLREISKP*CIKAIALRTSSLNE Trigger: TTCATTAAGGGAGCTTGTCCTAAGAGCTATGGCTTTAATGCAGCAAGGCTTGCTAATCTCCCGGAGGAGGTTATTCAGAAGGGACACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | TGCTCATCTCTTCTCTTTTCTGGCTTAAGCCATTCTAAAGTTTCGTaGTACCAAACAGTGGGTCCACTACTGTCGTTACCTCCTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: CSSLLFSGLSHSKVS*YQTVGPLLSLPPPL Trigger: CAGTGGAGGAGGTAACGACAGTAGTGGACCCACTGTTTGGTATCACGAAACTTTAGAATGGCTTAAGCCAGAAAAGAGAAGAGATGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 90 bp | GTCTTAGTGGCATCCCAAAATTGGGAACCTGGTATGAGACCTTCCTaGAGACAAGATGACAGTGAACCCTTTAGGACAGTTTTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VLVASQNWEPGMRPS*RQDDSEPFRTVLVS Trigger: AGAGACCAAAACTGTCCTAAAGGGTTCACTGTCATCTTGTCTTCAGGAAGGTCTCATACCAGGTTCCCAATTTTGGGATGCCACTAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 90 bp | GTGTCCCTTCTGAATAACCTCCTCCGGGAGATTAGCAAGCCTTGCTaGATTAAAGCCATAGCTCTTAGGACAAGCTCCCTTAATGAATTT | + |
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Preference number: 5 (lower is better) Translates to: VSLLNNLLREISKPC*IKAIALRTSSLNEF Trigger: AAATTCATTAAGGGAGCTTGTCCTAAGAGCTATGGCTTTAATGCAGCAAGGCTTGCTAATCTCCCGGAGGAGGTTATTCAGAAGGGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | CCGCGGGAAGCGGAGGCTCCAGAGGCAGCGGCACCTTaGCGTGAGGCCTCGGCCGCGGCCTTCTTGGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: PREAEAPEAAAP*REASAAAFLVS Trigger: CGACACCAAGAAGGCCGCGGCCGAGGCCTCACGCCAAGGTGCCGCTGCCTCTGGAGCCTCCGCTTCCCGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | GGAGGCACGGCCTGCGCGGAGGAGGAGGCCCTCCGCAGCCCTCCGTaGAGATCCTTTGCCTCCGGCGACGAGGCGGATACCGCCGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: GGTACAEEEALRSPP*RSFASGDEADTAAD Trigger: GTCCGCGGCGGTATCCGCCTCGTCGCCGGAGGCAAAGGATCTCAACGGAGGGCTGCGGAGGGCCTCCTCCTCCGCGCAGGCCGTGCCTCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | GGAGGAGGCCCTCCGCAGCCCTCCGTTGAGATCCTTTaGCTCCGGCGACGAGGCGGATACCGCCGCGGACCG | + |
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Preference number: 6 (lower is better) Translates to: GGGPPQPSVEIL*LRRRGGYRRGP Trigger: CGGTCCGCGGCGGTATCCGCCTCGTCGCCGGAGGCAAAGGATCTCAACGGAGGGCTGCGGAGGGCCTCCTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | CCTGCGCGGAGGAGGAGGCCCTCCGCAGCCCTCCGTTaGGATCCTTTGCCTCCGGCGACGAGGCGGATACCG | + |
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Preference number: 6 (lower is better) Translates to: PARRRRPSAALR*DPLPPATRRIP Trigger: CGGTATCCGCCTCGTCGCCGGAGGCAAAGGATCTCAACGGAGGGCTGCGGAGGGCCTCCTCCTCCGCGCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | GCCTGCGCGGAGGAGGAGGCCCTCCGCAGCCCTCCGTaGAGATCCTTTGCCTCCGGCGACGAGGCGGATACC | + |
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Preference number: 6 (lower is better) Translates to: ACAEEEALRSPP*RSFASGDEADT Trigger: GGTATCCGCCTCGTCGCCGGAGGCAAAGGATCTCAACGGAGGGCTGCGGAGGGCCTCCTCCTCCGCGCAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | CCAGAGGCAGCGGCACCTTGGCGTGAGGCCTCGGCCGCGGCCTTCTaGGTGTCGCCGAGTGCCGGGGACTTGGGGAAGAAGCTGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: PEAAAPWREASAAAF*VSPSAGDLGKKLYK Trigger: CTTGTACAGCTTCTTCCCCAAGTCCCCGGCACTCGGCGACACCAAGAAGGCCGCGGCCGAGGCCTCACGCCAAGGTGCCGCTGCCTCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | GCCGCGGCCTTCTTGGTGTCGCCGAGTGCCGGGGACTaGGGGAAGAAGCTGTACAAGGTGCTTTGTCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AAAFLVSPSAGD*GKKLYKVLCRD Trigger: GTCCCGACAAAGCACCTTGTACAGCTTCTTCCCCAAGTCCCCGGCACTCGGCGACACCAAGAAGGCCGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | CCGCGGCCTTCTTGGTGTCGCCGAGTGCCGGGGACTTaGGGAAGAAGCTGTACAAGGTGCTTTGTCGGGACA | + |
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Preference number: 6 (lower is better) Translates to: PRPSWCRRVPGT*GRSCTRCFVGT Trigger: TGTCCCGACAAAGCACCTTGTACAGCTTCTTCCCCAAGTCCCCGGCACTCGGCGACACCAAGAAGGCCGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | TGGCTCTCTTCCGCTTTGGAGCGCCTTTGCCAAAGGTaGCTAGGTCCTCACTATCGCTGTCCCCAACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: WLSSALERLCQR*LGPHYRCPQLH Trigger: GTGGAGTTGGGGACAGCGATAGTGAGGACCTAGGCACCTTTGGCAAAGGCGCTCCAAAGCGGAAGAGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | CGAGCCTTCTCATGGTCAAAGGCTGTGTCCCATCGCTaGAGTTCTGCAGTCAGGTCAGGAAAGCGGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RAFSWSKAVSHR*SSAVRSGKRPL Trigger: TAAAGGCCGCTTTCCTGACCTGACTGCAGAACTGCAGCGATGGGACACAGCCTTTGACCATGAGAAGGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | TTCTACATCAGAGCCACCAATGTCACTCTCCGAGTCTaGGATGACCCGTCGCTTCTTGACTTGCCGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FYIRATNVTLRV*DDPSLLDLPAA Trigger: AGCAGCCGGCAAGTCAAGAAGCGACGGGTCATCTCAGACTCGGAGAGTGACATTGGTGGCTCTGATGTAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | AAACAGTGGGTCCACTACTGTCGTTACCTCCTCCACTaGCGTGGGTCTGGGATTCAGAATTCTGAGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KQWVHYCRYLLH*RGSGIQNSEGQ Trigger: CTGCCCCTCAGAATTCTGAATCCCAGACCCACGTCAGTGGAGGAGGTAACGACAGTAGTGGACCCACTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | GCTGCCACCACTTCCTCATCCCTGGGGTACAAGAATTaGGGAACTCTTCAGGCACATACAGTGTGGTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: AATTSSSLGYKN*GTLQAHTVWWG Trigger: ACCCCACCACACTGTATGTGCCTGAAGAGTTCCTCAATTCTTGTACCCCAGGGATGAGGAAGTGGTGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | CCGGCTGCTTCGCCTAGGCCCCTGAACACTGGGCTGTaGTTCTTCTTCACTCTCGTTGTAATTATCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PAASPRPLNTGL*FFFTLVVIILF Trigger: GAAGAGGATAATTACAACGAGAGTGAAGAAGAAGCACAGCCCAGTGTTCAGGGGCCTAGGCGAAGCAGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005503.5 ENSMUST00000234756.2 |
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| CDS CCA 72 bp | TTTGGAGTGATGAGTCCGGTCTTCCGAGCCTTCTCATaGTCAAAGGCTGTGTCCCATCGCTGCAGTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FGVMSPVFRAFS*SKAVSHRCSSA Trigger: TGCAGAACTGCAGCGATGGGACACAGCCTTTGACCATGAGAAGGCTCGGAAGACCGGACTCATCACTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | AGCTGCCACCACTTCCTCATCCCTGGGGTACAAGAATaGAGGAACTCTTCAGGCACATACAGTGTGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCHHFLIPGVQE*RNSSGTYSVVG Trigger: CCCCACCACACTGTATGTGCCTGAAGAGTTCCTCAATTCTTGTACCCCAGGGATGAGGAAGTGGTGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | TTCACTCTCCTCGCCTGGTGTCAACCCAACAGAATCTaGCTCCGAGGTCATTCCTTTAAGCACCAGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FTLLAWCQPNRI*LRGHSFKHQRQ Trigger: CTGCCTCTGGTGCTTAAAGGAATGACCTCGGAGTCAGATTCTGTTGGGTTGACACCAGGCGAGGAGAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | CTCCATCATTTCTGGAGTCTCGGTCTGCTCCACTCGTaGTACCTTATAGCCCTTCTGCACCAAGGAATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LHHFWSLGLLHS*YLIALLHQGIR Trigger: TCGGATTCCTTGGTGCAGAAGGGCTATAAGGTAGCACGAGTGGAGCAGACCGAGACTCCAGAAATGATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | CTCATGGTCAAAGGCTGTGTCCCATCGCTGCAGTTCTaGAGTCAGGTCAGGAAAGCGGCCTTTAGGACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LMVKGCVPSLQF*SQVRKAAFRTF Trigger: AAAAGTCCTAAAGGCCGCTTTCCTGACCTGACTGCAGAACTGCAGCGATGGGACACAGCCTTTGACCATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | CACCAAGGAATCCGAGAACCGGCCAAACGCAATCTCTaGAAAACCAGAATGGGCCCAGTTGCCCTTCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: HQGIREPAKRNL*KTRMGPVALHE Trigger: TTCATGAAGGGCAACTGGGCCCATTCTGGTTTTCCAGAGATTGCGTTTGGCCGGTTCTCGGATTCCTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | GTGTGCCATTTTCCGACATCGCGCCTCCATCATTTCTaGAGTCTCGGTCTGCTCCACTCGTGCTACCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: VCHFPTSRLHHF*SLGLLHSCYLI Trigger: TATAAGGTAGCACGAGTGGAGCAGACCGAGACTCCAGAAATGATGGAGGCGCGATGTCGGAAAATGGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | GGCAGCTTCTTTAAGAGGTCTGCAACTTCAGTGACCTaGTCAGGCACGGCCATCAGATCTTCCACCGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GSFFKRSATSVT*SGTAIRSSTAS Trigger: AGATGCGGTGGAAGATCTGATGGCCGTGCCTGACAAGGTCACTGAAGTTGCAGACCTCTTAAAGAAGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | CCACTGCTCGCGTCATCACTGCTTCCTTCCTGCTTAGTGTCTGGCTaGAATTCTACATCAGAGCCACCAATGTCACTCTCCGAGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLASSLLPSCLVSG*NSTSEPPMSLSESE Trigger: CTCAGACTCGGAGAGTGACATTGGTGGCTCTGATGTAGAATTCAAGCCAGACACTAAGCAGGAAGGAAGCAGTGATGACGCGAGCAGTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | TCAAGGTCTGGCAGCTTCTTTAAGAGGTCTGCAACTTCAGTGACCTaGTCAGGCACGGCCATCAGATCTTCCACCGCATCTAGACGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRSGSFFKRSATSVT*SGTAIRSSTASRRS Trigger: TGACCGTCTAGATGCGGTGGAAGATCTGATGGCCGTGCCTGACAAGGTCACTGAAGTTGCAGACCTCTTAAAGAAGCTGCCAGACCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | GAGAACCGGCCAAACGCAATCTCTGGAAAACCAGAATGGGCCCAGTaGCCCTTCATGAATATCAGCCCCAGCTCACTGACTCCAATAACA | + |
|
Preference number: 6 (lower is better) Translates to: ENRPNAISGKPEWAQ*PFMNISPSSLTPIT Trigger: TGTTATTGGAGTCAGTGAGCTGGGGCTGATATTCATGAAGGGCAACTGGGCCCATTCTGGTTTTCCAGAGATTGCGTTTGGCCGGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | CCTTTAGGACTTTTTGACTGCAGAGTAACAACCTGCTTGAGGGTTTaGGACGTAAAACCACCCGCGACCTCCTCCAGAAGCCCTGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PLGLFDCRVTTCLRV*DVKPPATSSRSPET Trigger: AGTCTCAGGGCTTCTGGAGGAGGTCGCGGGTGGTTTTACGTCCAAAACCCTCAAGCAGGTTGTTACTCTGCAGTCAAAAAGTCCTAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | AAGACATCCAACACTGCAATGCACTCTACAGCAGACTGCCAGTCCTaGTGGTTCTTGTCGAAGTTACAGAACAAGCGCCGCATGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KTSNTAMHSTADCQS*WFLSKLQNKRRMQS Trigger: GGACTGCATGCGGCGCTTGTTCTGTAACTTCGACAAGAACCACAAGGACTGGCAGTCTGCTGTAGAGTGCATTGCAGTGTTGGATGTCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | TCAGGCACATACAGTGTGGTGGGGTTAAATTCAGGGTaGTCGGGGCGTCTCCTGTGCTCATCTCTTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGTYSVVGLNSG*SGRLLCSSLLF Trigger: AAAGAGAAGAGATGAGCACAGGAGACGCCCCGATCACCCTGAATTTAACCCCACCACACTGTATGTGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | CTCCCTTCTCACCACTCTATCAAACTTGGACACGTGTaGCATTTTCCGACATCGCGCCTCCATCATTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSHHSIKLGHV*HFPTSRLHHFW Trigger: CCAGAAATGATGGAGGCGCGATGTCGGAAAATGGCACACGTGTCCAAGTTTGATAGAGTGGTGAGAAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | TTCCCCAGTAGACTATGCTCTTACAGCCAAGCCGACTaGGCTGTTTGTCTAAGTACTCCAGGAGGCTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FPSRLCSYSQAD*AVCLSTPGGSV Trigger: AACAGAGCCTCCTGGAGTACTTAGACAAACAGCGCAGTCGGCTTGGCTGTAAGAGCATAGTCTACTGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | ACTGGTAACGGTTCCTACCGATTCCCCAGTAGACTATaGTCTTACAGCCAAGCCGACTGCGCTGTTTGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TGNGSYRFPSRL*SYSQADCAVCL Trigger: TAGACAAACAGCGCAGTCGGCTTGGCTGTAAGAGCATAGTCTACTGGGGAATCGGTAGGAACCGTTACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | ACTGCAATGCACTCTACAGCAGACTGCCAGTCCTTGTaGTTCTTGTCGAAGTTACAGAACAAGCGCCGCATG | + |
|
Preference number: 6 (lower is better) Translates to: TAMHSTADCQSL*FLSKLQNKRRM Trigger: CATGCGGCGCTTGTTCTGTAACTTCGACAAGAACCACAAGGACTGGCAGTCTGCTGTAGAGTGCATTGCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | ATCCTGCAAATCTCCCTTCTCACCACTCTATCAAACTaGGACACGTGTGCCATTTTCCGACATCGCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILQISLLTTLSN*DTCAIFRHRAS Trigger: GGAGGCGCGATGTCGGAAAATGGCACACGTGTCCAAGTTTGATAGAGTGGTGAGAAGGGAGATTTGCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | CTTTTTGACTGCAGAGTAACAACCTGCTTGAGGGTTTaGGACGTAAAACCACCCGCGACCTCCTCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LFDCRVTTCLRV*DVKPPATSSRS Trigger: GCTTCTGGAGGAGGTCGCGGGTGGTTTTACGTCCAAAACCCTCAAGCAGGTTGTTACTCTGCAGTCAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | AACACTGCAATGCACTCTACAGCAGACTGCCAGTCCTaGTGGTTCTTGTCGAAGTTACAGAACAAGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: NTAMHSTADCQS*WFLSKLQNKRR Trigger: GCGGCGCTTGTTCTGTAACTTCGACAAGAACCACAAGGACTGGCAGTCTGCTGTAGAGTGCATTGCAGTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | GTCAGCAAGTGCTTGGTCATAATCAGAGTCAAACCCTaGTTTTGGAGTGATGAGTCCGGTCTTCCGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSKCLVIIRVKP*FWSDESGLPSL Trigger: AAGGCTCGGAAGACCGGACTCATCACTCCAAAAGCAGGGTTTGACTCTGATTATGACCAAGCACTTGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | GTCCTAAATCTGGAACAGTGGCGGTCATCCGAAAACTaGCCGATGAAAAACTTGCCCAGTGAAGTGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VLNLEQWRSSEN*PMKNLPSEVST Trigger: TGTGGACACTTCACTGGGCAAGTTTTTCATCGGCCAGTTTTCGGATGACCGCCACTGTTCCAGATTTAGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | AACACTGCAATGCACTCTACAGCAGACTGCCAGTCCTTGTGGTTCTaGTCGAAGTTACAGAACAAGCGCCGCATGCAGTCCTTTAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: NTAMHSTADCQSLWF*SKLQNKRRMQSFKD Trigger: ATCCTTAAAGGACTGCATGCGGCGCTTGTTCTGTAACTTCGACAAGAACCACAAGGACTGGCAGTCTGCTGTAGAGTGCATTGCAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | CAGCCCCTTGTTGGGCTGTCATCAAAGAACTGTACATaGACACGGACAGATTTCCCTTTCTTCCGGATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QPLVGLSSKNCT*TRTDFPFFRMN Trigger: GTTCATCCGGAAGAAAGGGAAATCTGTCCGTGTTCATGTACAGTTCTTTGATGACAGCCCAACAAGGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005503.5 ENSMUST00000234756.2 |
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| CDS TCA 72 bp | ATCTGGAACAGTGGCGGTCATCCGAAAACTGGCCGATaGAAAACTTGCCCAGTGAAGTGTCCACAAAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IWNSGGHPKTGR*KTCPVKCPQSK Trigger: TTTGCTTTGTGGACACTTCACTGGGCAAGTTTTTCATCGGCCAGTTTTCGGATGACCGCCACTGTTCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | CTGAATAACCTCCTCCGGGAGATTAGCAAGCCTTGCTaGATTAAAGCCATAGCTCTTAGGACAAGCTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LNNLLREISKPC*IKAIALRTSSL Trigger: AAGGGAGCTTGTCCTAAGAGCTATGGCTTTAATGCAGCAAGGCTTGCTAATCTCCCGGAGGAGGTTATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | CTTCTGAATAACCTCCTCCGGGAGATTAGCAAGCCTTaGTGCATTAAAGCCATAGCTCTTAGGACAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLNNLLREISKP*CIKAIALRTSS Trigger: GGAGCTTGTCCTAAGAGCTATGGCTTTAATGCAGCAAGGCTTGCTAATCTCCCGGAGGAGGTTATTCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | GTATGTCGTTTCTTCGTACATTATAGCCCTGCTGTCTaGATGGTTCTGGCTCTTCAGGGGAGACCCAACATT | + |
|
Preference number: 6 (lower is better) Translates to: VCRFFVHYSPAV*MVLALQGRPNI Trigger: AATGTTGGGTCTCCCCTGAAGAGCCAGAACCATCCAGACAGCAGGGCTATAATGTACGAAGAAACGACATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | AAGTGCTTGGTCATAATCAGAGTCAAACCCTGCTTTTaGAGTGATGAGTCCGGTCTTCCGAGCCTTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: KCLVIIRVKPCF*SDESGLPSLLM Trigger: CATGAGAAGGCTCGGAAGACCGGACTCATCACTCCAAAAGCAGGGTTTGACTCTGATTATGACCAAGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | GCGCTCAAGGTACTCTTGGTTTCTGAGAGAATGGGAGTTGCTCGTTaGGCTGAGCCTGTTTCCTTCTTCAGACTTTTCCTTCTAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALKVLLVSERMGVAR*AEPVSFFRLFLLSP Trigger: TGGACTTAGAAGGAAAAGTCTGAAGAAGGAAACAGGCTCAGCCAAACGAGCAACTCCCATTCTCTCAGAAACCAAGAGTACCTTGAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | GTACTCCAGGAGGCTCTGTTCATTCTCTCTGATGTCAGCAAGTGCTaGGTCATAATCAGAGTCAAACCCTGCTTTTGGAGTGATGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLQEALFILSDVSKC*VIIRVKPCFWSDES Trigger: GGACTCATCACTCCAAAAGCAGGGTTTGACTCTGATTATGACCAAGCACTTGCTGACATCAGAGAGAATGAACAGAGCCTCCTGGAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | CAGAAAAAGCGCTCAAGGTACTCTTGGTTTCTGAGAGAATGGGAGTaGCTCGTTTGGCTGAGCCTGTTTCCTTCTTCAGACTTTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QKKRSRYSWFLREWE*LVWLSLFPSSDFSF Trigger: GAAGGAAAAGTCTGAAGAAGGAAACAGGCTCAGCCAAACGAGCAACTCCCATTCTCTCAGAAACCAAGAGTACCTTGAGCGCTTTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | TTGGTAATGATCCTGCAAATCTCCCTTCTCACCACTCTATCAAACTaGGACACGTGTGCCATTTTCCGACATCGCGCCTCCATCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVMILQISLLTTLSN*DTCAIFRHRASIIS Trigger: AGAAATGATGGAGGCGCGATGTCGGAAAATGGCACACGTGTCCAAGTTTGATAGAGTGGTGAGAAGGGAGATTTGCAGGATCATTACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | GTCATCCGAAAACTGGCCGATGAAAAACTTGCCCAGTaGAGTGTCCACAAAGCAAACACCATACACACGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VIRKLADEKLAQ*SVHKANTIHTS Trigger: ACTCGTGTGTATGGTGTTTGCTTTGTGGACACTTCACTGGGCAAGTTTTTCATCGGCCAGTTTTCGGATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | AGGTTGTTTAATGTCACTGCGTCTAGCACCATCCGCTaGCTGGCTTTAGTAAAGACAGCCCCAGGTTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: RLFNVTASSTIR*LALVKTAPGFT Trigger: AGTAAAACCTGGGGCTGTCTTTACTAAAGCCAGTCAGCGGATGGTGCTAGACGCAGTGACATTAAACAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS GCA 72 bp | AAGACATCCAACACTGCAATGCACTCTACAGCAGACTaGCAGTCCTTGTGGTTCTTGTCGAAGTTACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KTSNTAMHSTAD*QSLWFLSKLQN Trigger: GTTCTGTAACTTCGACAAGAACCACAAGGACTGGCAGTCTGCTGTAGAGTGCATTGCAGTGTTGGATGTCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CCA 72 bp | AAAAAGCGCTCAAGGTACTCTTGGTTTCTGAGAGAATaGGAGTTGCTCGTTTGGCTGAGCCTGTTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KKRSRYSWFLRE*ELLVWLSLFPS Trigger: AGAAGGAAACAGGCTCAGCCAAACGAGCAACTCCCATTCTCTCAGAAACCAAGAGTACCTTGAGCGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | AAGGAGTGTTCGCAAGGTCTTAGTGGCATCCCAAAATaGGGAACCTGGTATGAGACCTTCCTGAAGACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KECSQGLSGIPK*GTWYETFLKTR Trigger: TCTTGTCTTCAGGAAGGTCTCATACCAGGTTCCCAATTTTGGGATGCCACTAAGACCTTGCGAACACTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | GCATCCCAAAATTGGGAACCTGGTATGAGACCTTCCTaGAGACAAGATGACAGTGAACCCTTTAGGACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASQNWEPGMRPS*RQDDSEPFRTV Trigger: AACTGTCCTAAAGGGTTCACTGTCATCTTGTCTTCAGGAAGGTCTCATACCAGGTTCCCAATTTTGGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | GTACTCTTGGTTTCTGAGAGAATGGGAGTTGCTCGTTaGGCTGAGCCTGTTTCCTTCTTCAGACTTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLLVSERMGVAR*AEPVSFFRLFL Trigger: AAGGAAAAGTCTGAAGAAGGAAACAGGCTCAGCCAAACGAGCAACTCCCATTCTCTCAGAAACCAAGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | GAGGCTCTGTTCATTCTCTCTGATGTCAGCAAGTGCTaGGTCATAATCAGAGTCAAACCCTGCTTTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: EALFILSDVSKC*VIIRVKPCFWS Trigger: ACTCCAAAAGCAGGGTTTGACTCTGATTATGACCAAGCACTTGCTGACATCAGAGAGAATGAACAGAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | CACTTTATGGTTTCAGCAAGTTCTTTAACAACCGCATaGGCTATCGCTGTCCCATCAAAAGTTGCGGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HFMVSASSLTTA*AIAVPSKVAVP Trigger: AGGCACCGCAACTTTTGATGGGACAGCGATAGCCAATGCGGTTGTTAAAGAACTTGCTGAAACCATAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 90 bp | TGGGCTTCCTTTGACTTTGAACCTGTATATGGCTTTAACATCCTTTaGCTAACCCAGCCCCTTGTTGGGCTGTCATCAAAGAACTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: WASFDFEPVYGFNIL*LTQPLVGLSSKNCT Trigger: TGTACAGTTCTTTGATGACAGCCCAACAAGGGGCTGGGTTAGCAAAAGGATGTTAAAGCCATATACAGGTTCAAAGTCAAAGGAAGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005503.5 ENSMUST00000234756.2 |
||
| CDS CAA 90 bp | AGTGTTCGACACTTTATGGTTTCAGCAAGTTCTTTAACAACCGCATaGGCTATCGCTGTCCCATCAAAAGTTGCGGTGCCTCTTCCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SVRHFMVSASSLTTA*AIAVPSKVAVPLPN Trigger: ATTAGGAAGAGGCACCGCAACTTTTGATGGGACAGCGATAGCCAATGCGGTTGTTAAAGAACTTGCTGAAACCATAAAGTGTCGAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | TGTCTAAGTACTCCAGGAGGCTCTGTTCATTCTCTCTaGTGTCAGCAAGTGCTTGGTCATAATCAGAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLSTPGGSVHSL*CQQVLGHNQSQ Trigger: TTGACTCTGATTATGACCAAGCACTTGCTGACATCAGAGAGAATGAACAGAGCCTCCTGGAGTACTTAGACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS TCA 72 bp | CTTCTCTTTTCTGGCTTAAGCCATTCTAAAGTTTCGTaGTACCAAACAGTGGGTCCACTACTGTCGTTACCT | + |
|
Preference number: 6 (lower is better) Translates to: LLFSGLSHSKVS*YQTVGPLLSLP Trigger: AGGTAACGACAGTAGTGGACCCACTGTTTGGTATCACGAAACTTTAGAATGGCTTAAGCCAGAAAAGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005503.5 |
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| CDS CAA 72 bp | TTTGACTTTGAACCTGTATATGGCTTTAACATCCTTTaGCTAACCCAGCCCCTTGTTGGGCTGTCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FDFEPVYGFNIL*LTQPLVGLSSK Trigger: CTTTGATGACAGCCCAACAAGGGGCTGGGTTAGCAAAAGGATGTTAAAGCCATATACAGGTTCAAAGTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005503.5 ENSMUST00000234756.2 |
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