Pregenerated sensors for MSH5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007035Ensembl transcript IDs: ENSMUST00000007250.14, ENSMUST00000097338.11, ENSMUST00000172491.2, ENSMUST00000172536.2, ENSMUST00000174026.8, ENSMUST00000174556.8, ENSMUST00000174603.8
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGAAGCCCAGCCTGGGCCGCTGTGTGGGAGGCGTGGCTGGCACTaGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: QEAQPGPLCGRRGWH*RRLGKAGRRRQGLP Trigger: GGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCCACGCCTCCCACACAGCGGCCCAGGCTGGGCTTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR CCA 90 bp | GTGGGTCAGGAAGCCCAGCCTGGGCCGCTGTGTGGGAGGCGTGGCTaGCACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGT | + |
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Preference number: 1 (lower is better) Translates to: VGQEAQPGPLCGRRG*HWRRLGKAGRRRQG Trigger: ACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCCACGCCTCCCACACAGCGGCCCAGGCTGGGCTTCCTGACCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR CCA 90 bp | ACCCGAGTCAAGACCGAAGCCCGTGCCAGCACCTGGCACTGCAGCTaGTACATCAACAGGGTCTCCTGGTCCCGGATCTCGCAGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TRVKTEARASTWHCS*YINRVSWSRISQCR Trigger: CCTGCACTGCGAGATCCGGGACCAGGAGACCCTGTTGATGTACCAGCTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTGACTCGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR GCA 90 bp | TCCAATACCCGAGTCAAGACCGAAGCCCGTGCCAGCACCTGGCACTaGAGCTGGTACATCAACAGGGTCTCCTGGTCCCGGATCTCGCAG | + |
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Preference number: 1 (lower is better) Translates to: SNTRVKTEARASTWH*SWYINRVSWSRISQ Trigger: CTGCGAGATCCGGGACCAGGAGACCCTGTTGATGTACCAGCTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTGACTCGGGTATTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR CCA 90 bp | GCAAGGTCCAATACCCGAGTCAAGACCGAAGCCCGTGCCAGCACCTaGCACTGCAGCTGGTACATCAACAGGGTCTCCTGGTCCCGGATC | + |
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Preference number: 1 (lower is better) Translates to: ARSNTRVKTEARAST*HCSWYINRVSWSRI Trigger: GATCCGGGACCAGGAGACCCTGTTGATGTACCAGCTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTGACTCGGGTATTGGACCTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR CCA 90 bp | AGGGAGAGTAATGCGGTCTCGAATAGCCGTAGTCCCGGGCAGCACTaGCAAGAGCCAACAGGACGTCCAGGCGGGAGGCAAGGTCCAATA | + |
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Preference number: 1 (lower is better) Translates to: RESNAVSNSRSPGQH*QEPTGRPGGRQGPI Trigger: TATTGGACCTTGCCTCCCGCCTGGACGTCCTGTTGGCTCTTGCCAGTGCTGCCCGGGACTACGGCTATTCGAGACCGCATTACTCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR CCA 90 bp | GAACAAGGCTCAGGAAGTTGGTGGCTACAAAGACGTGGGGGCAGCTaGGTCCCAGTGCTAGCCAGTGACGGAGCACAGCAGCCAGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: EQGSGSWWLQRRGGS*VPVLASDGAQQPEV Trigger: CACTTCTGGCTGCTGTGCTCCGTCACTGGCTAGCACTGGGACCCAGCTGCCCCCACGTCTTTGTAGCCACCAACTTCCTGAGCCTTGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR TCA 90 bp | AGGTGGAGAGGCCGAGGGAGATGGATTCGCAGCTGTGAATTCGAGTaGAGATGGCGTCGATTACCCCAATCTCGGCCTCCTCTGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RWRGRGRWIRSCEFE*RWRRLPQSRPPLQA Trigger: TGCCTGCAGAGGAGGCCGAGATTGGGGTAATCGACGCCATCTTCACTCGAATTCACAGCTGCGAATCCATCTCCCTCGGCCTCTCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR TCA 90 bp | GTCCAGCTCCTTGGTCCGGGCGCTACGATAGTGCAGCTTGTCCTCTaGGAGAAACTGGGTGCAAGGAGTCCAAACTCTGGGCTTGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: VQLLGPGATIVQLVL*EKLGARSPNSGLVV Trigger: GACAACAAGCCCAGAGTTTGGACTCCTTGCACCCAGTTTCTCTCAGAGGACAAGCTGCACTATCGTAGCGCCCGGACCAAGGAGCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR GCA 90 bp | GCTGGCTTGCAACTCACAGAGACCCACCTGCCTCTGTCTCCAGAGTaGATGAAGTCCAGCCCCTCAATCTCAAAGTCACTAGCTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: AGLQLTETHLPLSPE*MKSSPSISKSLAST Trigger: GGTGGAAGCTAGTGACTTTGAGATTGAGGGGCTGGACTTCATGCACTCTGGAGACAGAGGCAGGTGGGTCTCTGTGAGTTGCAAGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR GCA 90 bp | AATTCGAGTGAAGATGGCGTCGATTACCCCAATCTCGGCCTCCTCTaGAGGCACGAAACTGCCCACCAGGGCCATGAAAGTGATCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: NSSEDGVDYPNLGLL*RHETAHQGHESDQA Trigger: GGCTTGATCACTTTCATGGCCCTGGTGGGCAGTTTCGTGCCTGCAGAGGAGGCCGAGATTGGGGTAATCGACGCCATCTTCACTCGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR TCA 90 bp | TCAATCATGAAGGTGGAGAGGCCGAGGGAGATGGATTCGCAGCTGTaGATTCGAGTGAAGATGGCGTCGATTACCCCAATCTCGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SIMKVERPREMDSQL*IRVKMASITPISAS Trigger: GGAGGCCGAGATTGGGGTAATCGACGCCATCTTCACTCGAATTCACAGCTGCGAATCCATCTCCCTCGGCCTCTCCACCTTCATGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR GCA 90 bp | ACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTaGTCTGTGGCATTGTTCACTGCTTTCGCCACCTGGTTGAGATCA | + |
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Preference number: 1 (lower is better) Translates to: TELVPFPNSSIRTSE*SVALFTAFATWLRS Trigger: TGATCTCAACCAGGTGGCGAAAGCAGTGAACAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR GCA 90 bp | TGCAGGCACGAAACTGCCCACCAGGGCCATGAAAGTGATCAAGCCTaGTTGAGATATATGCTTTTCCCTGAGGAGTTGGGCCCAGTGATG | + |
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Preference number: 1 (lower is better) Translates to: CRHETAHQGHESDQA*LRYMLFPEELGPVM Trigger: CATCACTGGGCCCAACTCCTCAGGGAAAAGCATATATCTCAAGCAGGCTTGATCACTTTCATGGCCCTGGTGGGCAGTTTCGTGCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR GCA 90 bp | GGCACGAAACTGCCCACCAGGGCCATGAAAGTGATCAAGCCTACCTaGTTGAGATATATGCTTTTCCCTGAGGAGTTGGGCCCAGTGATG | + |
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Preference number: 1 (lower is better) Translates to: GTKLPTRAMKVIKPT*LRYMLFPEELGPVM Trigger: CATCACTGGGCCCAACTCCTCAGGGAAAAGCATATATCTCAAGCAGGTAGGCTTGATCACTTTCATGGCCCTGGTGGGCAGTTTCGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
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| 3UTR TCA 90 bp | GGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTaGTGGGTTTCCCACTGCGGATCAAGTCTGAGACCTCTTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GSFPFGSSSEAHSWP*WVSHCGSSLRPLCH Trigger: GTGGCAAAGAGGTCTCAGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR TCA 90 bp | GCCAACAAAACAGCGGCCTTACCTTGTAGAGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACTTCATGCGTTTCAGAATCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: ANKTAALPCRGPASH*PWCGTTSCVSESEA Trigger: TGCCTCTGATTCTGAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCCTCTACAAGGTAAGGCCGCTGTTTTGTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR TCA 90 bp | CATGAAAGTGATCAAGCCTACCTGCTTGAGATATATGCTTTTCCCTaGGGAGTTGGGCCCAGTGATGACTTTGACCCTGCCCTGGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: HESDQAYLLEIYAFP*GVGPSDDFDPALVP Trigger: GGGGACCAGGGCAGGGTCAAAGTCATCACTGGGCCCAACTCCTCAGGGAAAAGCATATATCTCAAGCAGGTAGGCTTGATCACTTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
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| 3UTR CCA 90 bp | GGGTTGATTTCATCCAGAACTCTCTGGAGAAGCTTTAGGCTCTCGTaGTCTGGGGCATCTGGCATGAAGTGGATAGTGGAGTCACTAGTG | + |
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Preference number: 1 (lower is better) Translates to: GLISSRTLWRSFRLS*SGASGMKWIVESLV Trigger: CACTAGTGACTCCACTATCCACTTCATGCCAGATGCCCCAGACCACGAGAGCCTAAAGCTTCTCCAGAGAGTTCTGGATGAAATCAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR CCA 90 bp | TCCCTTAGCTCCCGGGTTGGACGTGTAAACCACAGCCTGGAGGGTTaGGATGGGAAGGTTACAAGTCACTTCTTCTCTCATCTTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: SLSSRVGRVNHSLEG*DGKVTSHFFSHLDF Trigger: AAAGTCAAGATGAGAGAAGAAGTGACTTGTAACCTTCCCATCCCAACCCTCCAGGCTGTGGTTTACACGTCCAACCCGGGAGCTAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR GCA 90 bp | GGAATGGAAAGAAGGAAGCCAATCACTCCACATGAGACCTATGGATaGATTCATGAGCAGCTGTCCTGCCCTCCAGCGTTGAAAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GMERRKPITPHETYG*IHEQLSCPPALKGF Trigger: AAAGCCTTTCAACGCTGGAGGGCAGGACAGCTGCTCATGAATGCATCCATAGGTCTCATGTGGAGTGATTGGCTTCCTTCTTTCCATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR CCA 90 bp | GTTACAAGTCACTTCTTCTCTCATCTTGACTTTGCTTGGGGAGCGTaGTACTGTATACCTGAGCAGCTTCTGTCCCCACTTACAGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: VTSHFFSHLDFAWGA*YCIPEQLLSPLTAA Trigger: TGCCGCTGTAAGTGGGGACAGAAGCTGCTCAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTGACTTGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR CCA 90 bp | TCCAGTTTTAGAAACGTATCCACCAGTGCCTGGCAGTTTTCCATTTaGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SSFRNVSTSAWQFSI*FLLRSSFVALMGFP Trigger: TGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATACGTTTCTAAAACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR CCA 90 bp | GATGGGAAGGTTACAAGTCACTTCTTCTCTCATCTTGACTTTGCTTaGGGAGCGTGGTACTGTATACCTGAGCAGCTTCTGTCCCCACTT | + |
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Preference number: 1 (lower is better) Translates to: DGKVTSHFFSHLDFA*GAWYCIPEQLLSPL Trigger: AAGTGGGGACAGAAGCTGCTCAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTGACTTGTAACCTTCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR CAA 90 bp | AGCCTGGGCCGCTGTGTGGGAGGCGTGGCTGGCACTGGCGACGCCTaGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCCATCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SLGRCVGGVAGTGDA*AKLVEEDKVFPILT Trigger: TGTGAGGATGGGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCCACGCCTCCCACACAGCGGCCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR GCA 90 bp | CCAATCTCGGCCTCCTCTGCAGGCACGAAACTGCCCACCAGGGCCATGAAAGTGCAAGACCGAAGCCCGTaGCAGCACCTGGCACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PISASSAGTKLPTRAMKVQDRSP*QHLALQ Trigger: CTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTG...CACTTTCATGGCCCTGGTGGGCAGTTTCGTGCCTGCAGAGGAGGCCGAGATTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGACGGAGCACAGCAGCCAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTAGTCCCGGGCAGCACTaGCAAGAGCCAACAGGACGT | + |
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Preference number: 2 (lower is better) Translates to: SDGAQQPEVPGHPPSWSPSPGQH*QEPTGR Trigger: ACGTCCTGTTGGCTCTTGCCAGTGCTGCCCGGGACT...AGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGGCTGCTGTGCTCCGTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCGGCCTCCTCTGCAGGCACGAAACTGCCCACCAGGGCCATGAAAGTGATCTCCCGGATCTCGCAGTaGAGGTCTCCCAGCAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: ISASSAGTKLPTRAMKVISRISQ*RSPSSV Trigger: CACGCTGCTGGGAGACCTGCACTGCGAGATCCGGGA...GATCACTTTCATGGCCCTGGTGGGCAGTTTCGTGCCTGCAGAGGAGGCCGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR-3UTR CCA 90 bp | CCAATCTCGGCCTCCTCTGCAGGCACGAAACTGCCCACCAGGGCCATGAAAGTGAGTCCCGGGCAGCACTaGCAAGAGCCAACAGGACGT | + |
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Preference number: 2 (lower is better) Translates to: PISASSAGTKLPTRAMKVSPGQH*QEPTGR Trigger: ACGTCCTGTTGGCTCTTGCCAGTGCTGCCCGGGACT...CACTTTCATGGCCCTGGTGGGCAGTTTCGTGCCTGCAGAGGAGGCCGAGATTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCTCCTGGTCCCGGATCTCGCAGTGCAGGTCTCCCAGCAGCGTGTCCAGCCTGAGAGAAACTGGGTaGAAGGAGTCCAAACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RVSWSRISQCRSPSSVSSLRETG*KESKLW Trigger: CCAGAGTTTGGACTCCTTGCACCCAGTTTCTCTCAG...GCTGGACACGCTGCTGGGAGACCTGCACTGCGAGATCCGGGACCAGGAGACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATCCACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGTCACAGAGACCCACCTaGCTCTGTCTCCAGAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: AIHRVGPLPEFIDQDQRVSQRPT*LCLQSA Trigger: TGCACTCTGGAGACAGAGGCAGGTGGGTCTCTGTGA...CACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTGGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR CAA 90 bp | TTGAGATATATGCTTTTCCCTGAGGAGTTGGGCCCAGTGATGACTTaGACCCTGCCCTGGTCCCCACCACAGTCCGTGGAGTTGGGCACG | + |
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Preference number: 2 (lower is better) Translates to: LRYMLFPEELGPVMT*TLPWSPPQSVELGT Trigger: CGTGCCCAACTCCACGGACTGTGGTGGGGACCAGGGCAGGGTCAAAGTCATCACTGGGCCCAACTCCTCAGGGAAAAGCATATATCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTCGCCACCTGGTTGAGATCAATCATGAAGGTGGAGAGGCCGAGGGAGATGGTGCAGCTTGTCCTCTaGGAGAAACTGGGTGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: AFATWLRSIMKVERPREMVQLVL*EKLGAR Trigger: CCTTGCACCCAGTTTCTCTCAGAGGACAAGCTGCAC...CATCTCCCTCGGCCTCTCCACCTTCATGATTGATCTCAACCAGGTGGCGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGAGGCGTGGCTGGCACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGATTCTATAGTCCTGGCTaGCTTGCAACTCACAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: CGRRGWHWRRLGKAGRRRFYSPG*LATHRD Trigger: GTCTCTGTGAGTTGCAAGCCAGCCAGGACTATAGAA...TCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCCACGCCTCCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGCGGATCAAGTCTCTATGGATGCATTCATaGGCAGCTGTCCTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLRSSFVALMGFPLRIKSLWMHS*AAVLPS Trigger: GGAGGGCAGGACAGCTGCTCATGAATGCATCCATAG...AGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| 3UTR-3UTR CCA 90 bp | TATCCACCAGTGCCTGGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGGCCACGAGCAATGAGTaGGTCAGGAAGCCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: YPPVPGSFPFGSSSEAHSATSNE*VRKPSL Trigger: CAGGCTGGGCTTCCTGACCCACTCATTGCTCGTGGC...CGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR CAA 90 bp | CAGGGGCAGGGAGATACTAAGAGTGAGGCTCTCCTAGGCTATACCTaGATGCCAACAAAACAGCGGCCTTACCTTGTAGAGGACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: QGQGDTKSEALLGYT*MPTKQRPYLVEDLP Trigger: TGGCAGGTCCTCTACAAGGTAAGGCCGCTGTTTTGTTGGCATCAAGGTATAGCCTAGGAGAGCCTCACTCTTAGTATCTCCCTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACCAGCGAGTGCTCTGTGGCATTGTTCACTGCTTTCGCCACCTGGTTGAGAATATATGCTTTTCCCTaGGGAGTTGGGCCCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: RTSECSVALFTAFATWLRIYAFP*GVGPSD Trigger: ATCACTGGGCCCAACTCCTCAGGGAAAAGCATATAT...TCTCAACCAGGTGGCGAAAGCAGTGAACAATGCCACAGAGCACTCGCTGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR CAA 90 bp | TGGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTaGATGGGTTTCCCACTGCGGATCAAGTCTGAGACCTCTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: WQFSIWFLLRSSFVA*MGFPLRIKSETSLP Trigger: TGGCAAAGAGGTCTCAGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGATGGATTCGCAGCTGTaGATTCGAGTGAAGATGGCG | + |
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Preference number: 2 (lower is better) Translates to: SIWFLLRSSFVALMGFPLMDSQL*IRVKMA Trigger: CGCCATCTTCACTCGAATTCACAGCTGCGAATCCAT...CAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACCAGCGAGTGCTCTGTGGCATTGTTCACTGCTTTCGCCACCTGGTTGAGATCAAGCCTACCTGCTTaGGATATATGCTTTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RTSECSVALFTAFATWLRSSLPA*DICFSL Trigger: CAGGGAAAAGCATATATCTCAAGCAGGTAGGCTTGA...TCTCAACCAGGTGGCGAAAGCAGTGAACAATGCCACAGAGCACTCGCTGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
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| 3UTR-3UTR CCA 90 bp | TATCCACCAGTGCCTGGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGAGAGGCCGAGGGAGATaGATTCGCAGCTGTGAATTC | + |
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Preference number: 2 (lower is better) Translates to: YPPVPGSFPFGSSSEAHSRGRGR*IRSCEF Trigger: GAATTCACAGCTGCGAATCCATCTCCCTCGGCCTCT...CGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCAGTGAGTAAAGTGTGGCATGGTGTCCCAAGAGAAGAAGGTCTAGACACAAGCTTTAGGCTCTCGTaGTCTGGGGCATCTGGCATG | + |
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Preference number: 2 (lower is better) Translates to: PSVSKVWHGVPREEGLDTSFRLS*SGASGM Trigger: CATGCCAGATGCCCCAGACCACGAGAGCCTAAAGCT...TGTGTCTAGACCTTCTTCTCTTGGGACACCATGCCACACTTTACTCACTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR CAA 90 bp | GTTGGGATGGGAAGGTTACAAGTCACTTCTTCTCTCATCTTGACTTaGCTTGGGGAGCGTGGTACTGTATACCTGAGCAGCTTCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VGMGRLQVTSSLILT*LGERGTVYLSSFCP Trigger: GGGACAGAAGCTGCTCAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTGACTTGTAACCTTCCCATCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| 3UTR CAA 90 bp | TGGAGGGTTGGGATGGGAAGGTTACAAGTCACTTCTTCTCTCATCTaGACTTTGCTTGGGGAGCGTGGTACTGTATACCTGAGCAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: WRVGMGRLQVTSSLI*TLLGERGTVYLSSF Trigger: GAAGCTGCTCAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTGACTTGTAACCTTCCCATCCCAACCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGTCCTCTGAGAGAAACTaGGTGCAAGGAGTCCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: SIWFLLRSSFVALMGFPLSSERN*VQGVQT Trigger: AGTTTGGACTCCTTGCACCCAGTTTCTCTCAGAGGA...CAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR CAA 90 bp | TTGTTTTGTTTTGGGACAGGATTTCATTCTATAGTCCTGGCTGGCTaGCAACTCACAGAGACCCACCTGCCTCTGTCTCCAGAGTGCATG | + |
|
Preference number: 2 (lower is better) Translates to: LFCFGTGFHSIVLAG*QLTETHLPLSPECM Trigger: CATGCACTCTGGAGACAGAGGCAGGTGGGTCTCTGTGAGTTGCAAGCCAGCCAGGACTATAGAATGAAATCCTGTCCCAAAACAAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGGCACAAGACACAATGTaGAAACTGAGAACTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SIWFLLRSSFVALMGFPLAQDTM*KLRTLQ Trigger: CTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGC...CAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGACAACTTCATGCGTTTCAGAATCAGAGGCACATTCTTGATGTGGCTCAGGTTGTACACCGAGGGGTaGGACTCACTCTTGAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: WDNFMRFRIRGTFLMWLRLYTEG*DSLLKI Trigger: GATTTTCAAGAGTGAGTCTCACCCCTCGGTGTACAA...CCTGAGCCACATCAAGAATGTGCCTCTGATTCTGAAACGCATGAAGTTGTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGACAACTTCATGCGTTTCAGAATCAGAGGCACATTCTTGATGTGGCTCAGGTCATCCAGAACTCTCTaGAGAAGCTTTAGGCTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: WDNFMRFRIRGTFLMWLRSSRTL*RSFRLS Trigger: CGAGAGCCTAAAGCTTCTCCAGAGAGTTCTGGATGA...CCTGAGCCACATCAAGAATGTGCCTCTGATTCTGAAACGCATGAAGTTGTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGTAGTTTCCGGAAAGGAGACGCTGTTTGCTTATCTCTGGACCAAAATCCAGCATCTGGCATGAAGTaGATAGTGGAGTCACTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RSSFRKGDAVCLSLDQNPASGMK*IVESLV Trigger: CACTAGTGACTCCACTATCCACTTCATGCCAGATGC...TGGATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTTTCCGGAAACTACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAAACATTTTTGCTATTTCTGCAACACAGAGTTTAAAGGAACCATCAGTGAGGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACT | + |
|
Preference number: 2 (lower is better) Translates to: CKHFCYFCNTEFKGTISEGPASH*PWCGTT Trigger: AGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCC...CTCACTGATGGTTCCTTTAAACTCTGTGTTGCAGAAATAGCAAAAATGTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGGAAAGTGATCAAGCCTaGTTGAGATATATGCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SIWFLLRSSFVALMGFPLESDQA*LRYMLF Trigger: GAAAAGCATATATCTCAAGCAGGCTTGATCACTTTC...CAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR-3UTR GCA 90 bp | AACGAATACAAACTTCTTGAATCCCAGGATAGGGACGCCAACATCATAGTCTTCAAAGGAGACGCTGTTTaGTTATCTCTGGACCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NEYKLLESQDRDANIIVFKGDAV*LSLDQN Trigger: ATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTTT...GAAGACTATGATGTTGGCGTCCCTATCCTGGGATTCAAGAAGTTTGTATTCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAAACATTTTTGCTATTTCTGCAACACAGAGTTTAAAGGAACCATCAGTGAGCTGTTTGCTTATCTCTaGACCAAAATCCACGCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CKHFCYFCNTEFKGTISELFAYL*TKIHAW Trigger: CCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAG...CTCACTGATGGTTCCTTTAAACTCTGTGTTGCAGAAATAGCAAAAATGTTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR GCA 72 bp | CGAGTCAAGACCGAAGCCCGTGCCAGCACCTGGCACTaGAGCTGGTACATCAACAGGGTCTCCTGGTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: RVKTEARASTWH*SWYINRVSWSR Trigger: CCGGGACCAGGAGACCCTGTTGATGTACCAGCTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTGACTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR CCA 72 bp | AATGCGGTCTCGAATAGCCGTAGTCCCGGGCAGCACTaGCAAGAGCCAACAGGACGTCCAGGCGGGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NAVSNSRSPGQH*QEPTGRPGGRQ Trigger: TTGCCTCCCGCCTGGACGTCCTGTTGGCTCTTGCCAGTGCTGCCCGGGACTACGGCTATTCGAGACCGCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR GCA 72 bp | TACATCAACAGGGTCTCCTGGTCCCGGATCTCGCAGTaGAGGTCTCCCAGCAGCGTGTCCAGCTCCTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: YINRVSWSRISQ*RSPSSVSSSLV Trigger: GACCAAGGAGCTGGACACGCTGCTGGGAGACCTGCACTGCGAGATCCGGGACCAGGAGACCCTGTTGATGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR CCA 72 bp | AATACCCGAGTCAAGACCGAAGCCCGTGCCAGCACCTaGCACTGCAGCTGGTACATCAACAGGGTCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NTRVKTEARAST*HCSWYINRVSW Trigger: CCAGGAGACCCTGTTGATGTACCAGCTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTGACTCGGGTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR GCA 72 bp | GAAGATGGCGTCGATTACCCCAATCTCGGCCTCCTCTaGAGGCACGAAACTGCCCACCAGGGCCATGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: EDGVDYPNLGLL*RHETAHQGHES Trigger: ACTTTCATGGCCCTGGTGGGCAGTTTCGTGCCTGCAGAGGAGGCCGAGATTGGGGTAATCGACGCCATCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR TCA 72 bp | GGCCGAGGGAGATGGATTCGCAGCTGTGAATTCGAGTaGAGATGGCGTCGATTACCCCAATCTCGGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRGRWIRSCEFE*RWRRLPQSRPP Trigger: AGGAGGCCGAGATTGGGGTAATCGACGCCATCTTCACTCGAATTCACAGCTGCGAATCCATCTCCCTCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR TCA 72 bp | CGTGGCCTTGATGGGTTTCCCACTGCGGATCAAGTCTaGGACCTCTTTGCCACGAGCAATGAGTGGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGLDGFPTADQV*DLFATSNEWVR Trigger: CCTGACCCACTCATTGCTCGTGGCAAAGAGGTCTCAGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR GCA 72 bp | GTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTaGTCTGTGGCATTGTTCACTGCTTTCGCCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPFPNSSIRTSE*SVALFTAFATW Trigger: CCAGGTGGCGAAAGCAGTGAACAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGATCAAGTCTGAGACCTCTTTGCCACGAGCAATGAGTGGGTCAGGAAGCCCACTTTTCCCTGAGGAGTaGGGCCCAGTGATGACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RIKSETSLPRAMSGSGSPLFPEE*GPVMTL Trigger: CAAAGTCATCACTGGGCCCAACTCCTCAGGGAAAAG...TGGGCTTCCTGACCCACTCATTGCTCGTGGCAAAGAGGTCTCAGACTTGATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR TCA 72 bp | CTGCCCACCAGGGCCATGAAAGTGATCAAGCCTGCTTaGGATATATGCTTTTCCCTGAGGAGTTGGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPTRAMKVIKPA*DICFSLRSWAQ Trigger: CTGGGCCCAACTCCTCAGGGAAAAGCATATATCTCAAGCAGGCTTGATCACTTTCATGGCCCTGGTGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR TCA 72 bp | AAGGTGGAGAGGCCGAGGGAGATGGATTCGCAGCTGTaGATTCGAGTGAAGATGGCGTCGATTACCCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: KVERPREMDSQL*IRVKMASITPI Trigger: GATTGGGGTAATCGACGCCATCTTCACTCGAATTCACAGCTGCGAATCCATCTCCCTCGGCCTCTCCACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR TCA 72 bp | CCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTaGTGGGTTTCCCACTGCGGATCAAGTCTGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: PFGSSSEAHSWP*WVSHCGSSLRP Trigger: AGGTCTCAGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR TCA 72 bp | ACAGCGGCCTTACCTTGTAGAGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACTTCATGCGTTTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TAALPCRGPASH*PWCGTTSCVSE Trigger: TTCTGAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCCTCTACAAGGTAAGGCCGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR GCA 72 bp | AGAAGGAAGCCAATCACTCCACATGAGACCTATGGATaGATTCATGAGCAGCTGTCCTGCCCTCCAGCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RRKPITPHETYG*IHEQLSCPPAL Trigger: CAACGCTGGAGGGCAGGACAGCTGCTCATGAATGCATCCATAGGTCTCATGTGGAGTGATTGGCTTCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR GCA 72 bp | CAACTCACAGAGACCCACCTGCCTCTGTCTCCAGAGTaGATGAAGTCCAGCCCCTCAATCTCAAAGTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: QLTETHLPLSPE*MKSSPSISKSL Trigger: TAGTGACTTTGAGATTGAGGGGCTGGACTTCATGCACTCTGGAGACAGAGGCAGGTGGGTCTCTGTGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR CCA 72 bp | TCATCCAGAACTCTCTGGAGAAGCTTTAGGCTCTCGTaGTCTGGGGCATCTGGCATGAAGTGGATAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSRTLWRSFRLS*SGASGMKWIVE Trigger: CTCCACTATCCACTTCATGCCAGATGCCCCAGACCACGAGAGCCTAAAGCTTCTCCAGAGAGTTCTGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCAATAGTCCTGGCTGGCTaGCAACTCACAGAGACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FSIWFLLRSSFVALMGFPIVLAG*QLTETH Trigger: GTGGGTCTCTGTGAGTTGCAAGCCAGCCAGGACTAT...TGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGTGGGACAACTTCATGCGTTTCAGAATCAGAGGCACATTCTTGATGTGGCCACAGCCTGGAGGGTaGGGATGGGAAGGTTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVWDNFMRFRIRGTFLMWPQPGG*GWEGYK Trigger: CTTGTAACCTTCCCATCCCAACCCTCCAGGCTGTGG...CCACATCAAGAATGTGCCTCTGATTCTGAAACGCATGAAGTTGTCCCACACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCAGTCACTGACCTTGGTGTGGGACAACTTCATGCGTTTCAGAATCAGAGGATAGCCTCATCCTGTTaGGCACTTGTGACAACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPVTDLGVGQLHAFQNQRIASSC*ALVTTD Trigger: GTCTGTTGTCACAAGTGCCAAACAGGATGAGGCTAT...CCTCTGATTCTGAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGACTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR TCA 72 bp | TTATCTCTGGACCAAAATCCACGCTTGGCAGAAGTATaGTTTCAGGTCCCTTTGGCTCTCTGTGCTCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLDQNPRLAEV*FQVPLALCAPR Trigger: CCGAGGAGCACAGAGAGCCAAAGGGACCTGAAATCATACTTCTGCCAAGCGTGGATTTTGGTCCAGAGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172491.2 ENSMUST00000174556.8 |
||
| 3UTR CCA 72 bp | TTGTTTTGGGACAGGATTTCATTCTATAGTCCTGGCTaGCTTGCAACTCACAGAGACCCACCTGCCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LFWDRISFYSPG*LATHRDPPASV Trigger: GACAGAGGCAGGTGGGTCTCTGTGAGTTGCAAGCCAGCCAGGACTATAGAATGAAATCCTGTCCCAAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR CCA 72 bp | AGAAACGTATCCACCAGTGCCTGGCAGTTTTCCATTTaGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: RNVSTSAWQFSI*FLLRSSFVALM Trigger: CATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATACGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR CCA 72 bp | CACTTCTTCTCTCATCTTGACTTTGCTTGGGGAGCGTaGTACTGTATACCTGAGCAGCTTCTGTCCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: HFFSHLDFAWGA*YCIPEQLLSPL Trigger: AAGTGGGGACAGAAGCTGCTCAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR CCA 72 bp | ATAGCCTCATCCTGTTTGGCACTTGTGACAACAGACTaGGGGTTGATTTCATCCAGAACTCTCTGGAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IASSCLALVTTD*GLISSRTLWRS Trigger: GCTTCTCCAGAGAGTTCTGGATGAAATCAACCCCCAGTCTGTTGTCACAAGTGCCAAACAGGATGAGGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCCGGAAAGGAGACGCTGTTTGCTTATCTCTGGACCAAAATCCACGCTTGACAACAGACTGGGGGTaGATTTCATCCAGAACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SFRKGDAVCLSLDQNPRLTTDWG*ISSRTL Trigger: GAGAGTTCTGGATGAAATCAACCCCCAGTCTGTTGT...CAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTTTCCGGAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACTTCCTGACTAATGAAAATGTCCAGGTCCAGGGTGGGATCCTCCAAGTCCAAACTCTGGGCTTGTaGTCTCTTGGTTTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QHFLTNENVQVQGGILQVQTLGL*SLGFCF Trigger: AAAACAAAAACCAAGAGACAACAAGCCCAGAGTTTG...GACTTGGAGGATCCCACCCTGGACCTGGACATTTTCATTAGTCAGGAAGTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGTGGGACAACTTCATGCGTTTCAGAATCAGAGGCACATTCTTGATGTGGTTACAGCGGCATCTGTaGAGGATTCCAAAAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVWDNFMRFRIRGTFLMWLQRHL*RIPKRL Trigger: CAGCCTTTTTGGAATCCTCAACAGATGCCGCTGTAA...CCACATCAAGAATGTGCCTCTGATTCTGAAACGCATGAAGTTGTCCCACACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR TCA 72 bp | GAGGAAAAGGATTTTCTCAGTAGCAGTCATGGAGTCTaGGATGAAGGAGTAGTTTCCGGAAAGGAGACGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEKDFLSSSHGV*DEGVVSGKETL Trigger: CAGCGTCTCCTTTCCGGAAACTACTCCTTCATCTCAGACTCCATGACTGCTACTGAGAAAATCCTTTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172491.2 ENSMUST00000174556.8 |
||
| 3UTR TCA 72 bp | TCCTTCAGCCCACTGGCTACTTTGTACACCGAGGGGTaGGACTCACTCTTGAAAATCTGTAGAACGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: SFSPLATLYTEG*DSLLKICRTNT Trigger: TGTATTCGTTCTACAGATTTTCAAGAGTGAGTCTCACCCCTCGGTGTACAAAGTAGCCAGTGGGCTGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR CCA 72 bp | TCCAAGTCCAGTTTTAGAAACGTATCCACCAGTGCCTaGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SKSSFRNVSTSA*QFSIWFLLRSS Trigger: TGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATACGTTTCTAAAACTGGACTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| 3UTR CCA 72 bp | ACGCTGTTTGCTTATCTCTGGACCAAAATCCACGCTTaGCAGAAGTATGATTTCAGGTCCCTTTGGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLFAYLWTKIHA*QKYDFRSLWLS Trigger: AGAGAGCCAAAGGGACCTGAAATCATACTTCTGCCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172491.2 ENSMUST00000174556.8 |
||
| 3UTR CCA 72 bp | GTTACAAGTCACTTCTTCTCTCATCTTGACTTTGCTTaGGGAGCGTGGTACTGTATACCTGAGCAGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VTSHFFSHLDFA*GAWYCIPEQLL Trigger: CAGAAGCTGCTCAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTGACTTGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR TCA 72 bp | CCGCCATGCTCCCACCACAATAATGGACAGAACCTTTaGACTGTAAGCGAGGCCCATTTAAATGTTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PPCSHHNNGQNL*TVSEAHLNVFL Trigger: AAGAAAAACATTTAAATGGGCCTCGCTTACAGTTCAAAGGTTCTGTCCATTATTGTGGTGGGAGCATGGCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR GCA 72 bp | AGAGGAGTAATTGCACTATTCACCTGCAAACATTTTTaGTATTTCTGCAACACAGAGTTTAAAGGAACCATC | + |
|
Preference number: 3 (lower is better) Translates to: RGVIALFTCKHF*YFCNTEFKGTI Trigger: GATGGTTCCTTTAAACTCTGTGTTGCAGAAATAGCAAAAATGTTTGCAGGTGAATAGTGCAATTACTCCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| CDS-3UTR GCA 90 bp | AGTGACGGAGCACAGCAGCCAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGGATCTCGCAGTaGAGGTCTCCCAGCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDGAQQPEVPGHPPSWSPSRISQ*RSPSSV Trigger: CACGCTGCTGGGAGACCTGCACTGCGAGATCCGGGA...AGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGGCTGCTGTGCTCCGTCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTTGCCACGAGCAATGAGTGGGTCAGGAAGCCCAGCCTGGGCCGCTGTGGAGGGCTGGGGAAGCTaGCTGAGGGGATTCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPRAMSGSGSPAWAAVEGWGS*LRGFRI Trigger: GATCCGGAATCCCCTCAGCCAGCTTCCCCAGCCCTC...CACAGCGGCCCAGGCTGGGCTTCCTGACCCACTCATTGCTCGTGGCAAAGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR GCA 90 bp | ATCAACAGGGTCTCCTGGTCCCGGATCTCGCAGTGCAGGTCTCCCAGCAGCGTGTCCTGGGGACTTCACTaGTCCCCTGCACTCGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: INRVSWSRISQCRSPSSVSWGLH*SPALAH Trigger: GTGAGCGAGTGCAGGGGAGCAGTGAAGTCCCCAGGA...CACGCTGCTGGGAGACCTGCACTGCGAGATCCGGGACCAGGAGACCCTGTTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAAGGTCCAATACCCGAGTCAAGACCGAAGCCCGTGCCAGCACCTGGCAGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: GGKVQYPSQDRSPCQHLAGPASH*PWCGTT Trigger: AGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCC...TGCCAGGTGCTGGCACGGGCTTCGGTCTTGACTCGGGTATTGGACCTTGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCGGGAGGCAAGGTCCAATACCCGAGTCAAGACCGAAGCCCGTGCCAGCAGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGRQGPIPESRPKPVPAVDDTA*GDARVQ Trigger: CTGGACTCTCGCATCCCCTCATGCAGTGTCATCTAC...TGCTGGCACGGGCTTCGGTCTTGACTCGGGTATTGGACCTTGCCTCCCGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | AGCACAGCAGCCAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGAATCAAGTGCCCGGACCGTaGGGACACAGTCAAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: STAARSARPSTELVPFPNQVPGP*GHSQRE Trigger: TTCCCTTTGACTGTGTCCTCACGGTCCGGGCACTTG...ATTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGGCTGCTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGTAGTCCCGGGCAGCACTGGCAAGAGCCAACAGGACGTCCAGGCGGGAGGTTGTACACCGAGGGGTaGGACTCACTCTTGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SRSPGQHWQEPTGRPGGRLYTEG*DSLLKI Trigger: GATTTTCAAGAGTGAGTCTCACCCCTCGGTGTACAA...CCTCCCGCCTGGACGTCCTGTTGGCTCTTGCCAGTGCTGCCCGGGACTACGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGGAGGCGTGGCTGGCACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGAGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: CGRRGWHWRRLGKAGRRRGPASH*PWCGTT Trigger: AGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCC...TCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCCACGCCTCCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGACTTTGACCCTGCCCTGGTCCCCACCACAGTCCGTGGAGTTGGGCACGGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMTLTLPWSPPQSVELGTVDDTA*GDARVQ Trigger: CTGGACTCTCGCATCCCCTCATGCAGTGTCATCTAC...CGTGCCCAACTCCACGGACTGTGGTGGGGACCAGGGCAGGGTCAAAGTCATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCGAGTGAAGATGGCGTCGATTACCCCAATCTCGGCCTCCTCTGCAGGCACGGAGGGCTGGGGAAGCTaGCTGAGGGGATTCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IRVKMASITPISASSAGTEGWGS*LRGFRI Trigger: GATCCGGAATCCCCTCAGCCAGCTTCCCCAGCCCTC...CGTGCCTGCAGAGGAGGCCGAGATTGGGGTAATCGACGCCATCTTCACTCGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGCGGATCTTGGGGGCTGAGGGCTaGGGAAGCTGGCTGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WFLLRSSFVALMGFPLRILGAEG*GSWLRG Trigger: TCCCCTCAGCCAGCTTCCCCAGCCCTCAGCCCCCAA...GATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGAGACCTCTTTGCCACGAGCAATGAGTGGGTCAGGAAGCCCAGCCTGGGCCCGTGCCAGCACCTaGCACTGCAGCTGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: KSETSLPRAMSGSGSPAWARAST*HCSWYI Trigger: GATGTACCAGCTGCAGTGCCAGGTGCTGGCACGGGC...CCAGGCTGGGCTTCCTGACCCACTCATTGCTCGTGGCAAAGAGGTCTCAGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| 3UTR CAA 72 bp | AGCACAGCAGCCAGAAGTGCCAGGCCATCCACCGAGTaGGTCCCCTTCCCGAATTCATCGATCAGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STAARSARPSTE*VPFPNSSIRTS Trigger: GCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGGCTGCTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTTCTTCGACTCAGGAACTTGAGCAGTCCTCCAAGTGCCCGGACCGTGAGGGAGGGCTGGGGAAGCTaGCTGAGGGGATTCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILLRLRNLSSPPSARTVREGWGS*LRGFRI Trigger: GATCCGGAATCCCCTCAGCCAGCTTCCCCAGCCCTC...CCTCACGGTCCGGGCACTTGGAGGACTGCTCAAGTTCCTGAGTCGAAGAAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| CDS-3UTR CCA 90 bp | CACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTAGTCCCGGGCAGCACTaGCAAGAGCCAACAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: HRVGPLPEFIDQDQRVLCSPGQH*QEPTGR Trigger: ACGTCCTGTTGGCTCTTGCCAGTGCTGCCCGGGACT...ACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCGTGGCTGGCACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAATCAGAGGCACATTCTTaGTGTGGCTCAGGAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRGWHWRRLGKAGRRRQSEAHS*CGSGVG Trigger: ACCGACTCCTGAGCCACATCAAGAATGTGCCTCTGA...TTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCCACGCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGACTTTGACCCTGCCCTGGTCCCCACCACAGTCCGTGGAGTTGGGCACGTTCTCCAGCTCCTTCTaGGCAACTTCAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VMTLTLPWSPPQSVELGTFSSSF*ATSVRK Trigger: CTTCCTCACTGAAGTTGCTCAGAAGGAGCTGGAGAA...CGTGCCCAACTCCACGGACTGTGGTGGGGACCAGGGCAGGGTCAAAGTCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTTCCCCATCCTCACAAGTCTCCATGGTCAAATACTGCACCAGGGGTCCTCCCGGATCTCGCAGTaGAGGTCTCCCAGCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVFPILTSLHGQILHQGSSRISQ*RSPSSV Trigger: CACGCTGCTGGGAGACCTGCACTGCGAGATCCGGGA...GGACCCCTGGTGCAGTATTTGACCATGGAGACTTGTGAGGATGGGGAAGACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTGGCATTGTTACTTTGACCCTGCCCTaGTCCCCACCACAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLPEFIDQDQRVLCGIVTLTLP*SPPQSV Trigger: CACGGACTGTGGTGGGGACCAGGGCAGGGTCAAAGT...AACAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGCCAACAGGACGTCCAGGCGGGAGGCAAGGTCCAATACCCGAGTCAAGTCCTGGGCAATGTCCTaGAAAAGCTGGATGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARANRTSRREARSNTRVKSWAMS*KSWMDC Trigger: ACAGTCCATCCAGCTTTTTCAGGACATTGCCCAGGA...CTTGACTCGGGTATTGGACCTTGCCTCCCGCCTGGACGTCCTGTTGGCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | GAAACGTATCCACCAGTGCCTGGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTTTGGGGGCTGAGGGCTaGGGAAGCTGGCTGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETYPPVPGSFPFGSSSEALGAEG*GSWLRG Trigger: TCCCCTCAGCCAGCTTCCCCAGCCCTCAGCCCCCAA...AGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATACGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTCCCCATCCTCACAAGTCTCCATGGTCAAATACTGCACCAGGGGTCCTTGGCGTGTCCAGCTCCTTaGTCCGGGCGCTACGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFPILTSLHGQILHQGSLACPAP*SGRYDS Trigger: ACTATCGTAGCGCCCGGACCAAGGAGCTGGACACGC...CAAGGACCCCTGGTGCAGTATTTGACCATGGAGACTTGTGAGGATGGGGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | ATCTCGGCCTCCTCTGCAGGCACGAAACTGCCCACCAGGGCCATGAAAGTGATCCGCTTGGCAGAAGTATaGTTTCAGGTCCCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISASSAGTKLPTRAMKVIRLAEV*FQVPLA Trigger: AGCCAAAGGGACCTGAAATCATACTTCTGCCAAGCG...GATCACTTTCATGGCCCTGGTGGGCAGTTTCGTGCCTGCAGAGGAGGCCGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGCGGATCAAGTCTGAGACCCAAGTGCCCGGACCGTaGGGACACAGTCAAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSSFVALMGFPLRIKSETQVPGP*GHSQRE Trigger: TTCCCTTTGACTGTGTCCTCACGGTCCGGGCACTTG...GGTCTCAGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGAATTCATCGGCATCAGGAAGAACTaGATGACATCCAGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSQKCQAIHRVGPLPEFIGIRKN*MTSSRE Trigger: TTCCCGACTGGATGTCATTCAGTTCTTCCTGATGCC...GATGAATTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGGCACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCGTGCAGCTTGTCCTCTaGGAGAAACATGAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GWHWRRLGKAGRRRQGLPVQLVL*EKHEVQ Trigger: CTGGACTTCATGTTTCTCTCAGAGGACAAGCTGCAC...GGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGCAGCCAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGAATGTGGGACAACTTCATaGGTTTCAGAATCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHSSQKCQAIHRVGPLPECGTTS*VSESEA Trigger: TGCCTCTGATTCTGAAACGCATGAAGTTGTCCCACA...TTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGGCTGCTGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CCA 90 bp | AGTTTCCGGAAAGGAGACGCTGTTTGCTTATCTCTGGACCAAAATCCACGCTTGTTGGGGGCTGAGGGCTaGGGAAGCTGGCTGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFRKGDAVCLSLDQNPRLLGAEG*GSWLRG Trigger: TCCCCTCAGCCAGCTTCCCCAGCCCTCAGCCCCCAA...CAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTTTCCGGAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172491.2 ENSMUST00000174556.8 |
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| CDS-3UTR CCA 90 bp | TGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGCGGATCAGCTTTAGGCTCTCGTaGTCTGGGGCATCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WFLLRSSFVALMGFPLRISFRLS*SGASGM Trigger: CATGCCAGATGCCCCAGACCACGAGAGCCTAAAGCT...GATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGAGACCTCTTTGCCACGAGCAATGAGTGGGTCAGGAAGCCCAGCCTGGCGCTTGGCAGAAGTATaGTTTCAGGTCCCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSETSLPRAMSGSGSPAWRLAEV*FQVPLA Trigger: AGCCAAAGGGACCTGAAATCATACTTCTGCCAAGCG...CCAGGCTGGGCTTCCTGACCCACTCATTGCTCGTGGCAAAGAGGTCTCAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR GCA 90 bp | AAATGTCCAGGTCCAGGGTGGGATCCTCCAAGTCCAGTTTTAGAAACGTATCCACAAGACCGAAGCCCGTaGCAGCACCTGGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCPGPGWDPPSPVLETYPQDRSP*QHLALQ Trigger: CTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTG...TGGATACGTTTCTAAAACTGGACTTGGAGGATCCCACCCTGGACCTGGACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAGACGCTGTTTGCTTATCTCTGGACCAAAATCCACGCTTGGCAGAAGTATTTGGGGGCTGAGGGCTaGGGAAGCTGGCTGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KETLFAYLWTKIHAWQKYLGAEG*GSWLRG Trigger: TCCCCTCAGCCAGCTTCCCCAGCCCTCAGCCCCCAA...ATACTTCTGCCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172491.2 ENSMUST00000174556.8 |
||
| CDS-3UTR CCA 90 bp | GCCATCCACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGGCATCTGGCATGAAGTaGATAGTGGAGTCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AIHRVGPLPEFIDQDQRVASGMK*IVESLV Trigger: CACTAGTGACTCCACTATCCACTTCATGCCAGATGC...CACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTGGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGTGGGATCCTCCAAGTCCAGTTTTAGAAACGTATCCACCAGTGCCTGGGGCACATTCTTGATGTaGCTCAGGAGTCGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVGSSKSSFRNVSTSAWGTFLM*LRSRCS Trigger: GCTGCACCGACTCCTGAGCCACATCAAGAATGTGCC...CCAGGCACTGGTGGATACGTTTCTAAAACTGGACTTGGAGGATCCCACCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| 3UTR CAA 72 bp | CTCCCGGGTTGGACGTGTAAACCACAGCCTGGAGGGTaGGGATGGGAAGGTTACAAGTCACTTCTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGWTCKPQPGG*GWEGYKSLLLS Trigger: TGAGAGAAGAAGTGACTTGTAACCTTCCCATCCCAACCCTCCAGGCTGTGGTTTACACGTCCAACCCGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTGGCATTGTTCTCCAGCTCCTTCTaGGCAACTTCAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPFPNSSIRTSECSVALFSSSF*ATSVRK Trigger: CTTCCTCACTGAAGTTGCTCAGAAGGAGCTGGAGAA...CAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR GCA 90 bp | GCCATCCACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGTGTGGGACAACTTCATaGGTTTCAGAATCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIHRVGPLPEFIDQDQRVCGTTS*VSESEA Trigger: TGCCTCTGATTCTGAAACGCATGAAGTTGTCCCACA...CACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTGGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | CACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTGCATCTGGCATGAAGTaGATAGTGGAGTCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRVGPLPEFIDQDQRVLCASGMK*IVESLV Trigger: CACTAGTGACTCCACTATCCACTTCATGCCAGATGC...ACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | CACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTTCATCCAGAACTCTCTaGAGAAGCTTTAGGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HRVGPLPEFIDQDQRVLCSSRTL*RSFRLS Trigger: CGAGAGCCTAAAGCTTCTCCAGAGAGTTCTGGATGA...ACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTCCAGGTCCAGGGTGGGATCCTCCAAGTCCAGTTTTAGAAACGTATCCAGCGTGTCCAGCTCCTTaGTCCGGGCGCTACGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCPGPGWDPPSPVLETYPACPAP*SGRYDS Trigger: ACTATCGTAGCGCCCGGACCAAGGAGCTGGACACGC...TGGATACGTTTCTAAAACTGGACTTGGAGGATCCCACCCTGGACCTGGACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGCCTGGGCCGCTGTGTaGGAGGCGTGGCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKAWAAV*EAWLAL Trigger: CAGTGCCAGCCACGCCTCCCACACAGCGGCCCAGGC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATGGGTTTCCCACTGCGGATCAAGTCTGAGACCTCTTTGCCACGAGCAATGAGTAGAGGCCGAGGGAGATaGATTCGCAGCTGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGFPLRIKSETSLPRAMSRGRGR*IRSCLR Trigger: TCTCAAGCAGCTGCGAATCCATCTCCCTCGGCCTCT...ACTCATTGCTCGTGGCAAAGAGGTCTCAGACTTGATCCGCAGTGGGAAACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| 3UTR CAA 72 bp | TCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTaGATGGGTTTCCCACTGCGGATCAAGTCTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SIWFLLRSSFVA*MGFPLRIKSET Trigger: GGTCTCAGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCATCCTCACAAGTCTCCATGGTCAAATACTGCACCAGGGGTCCTTGCGGCGGTGAGACTCACTCTTaGAAATCTGTAGAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSSQVSMVKYCTRGPCGGETHS*KSVERC Trigger: ACAGCGTTCTACAGATTTTCAAGAGTGAGTCTCACC...GCCGCAAGGACCCCTGGTGCAGTATTTGACCATGGAGACTTGTGAGGATGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGCGGATCTTGTACACCGAGGGGTaGGACTCACTCTTGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLRSSFVALMGFPLRILYTEG*DSLLKI Trigger: GATTTTCAAGAGTGAGTCTCACCCCTCGGTGTACAA...GATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | AATCATGAAGGTGGAGAGGCCGAGGGAGATGGATTCGCAGCTGTGAATTCGAGTTCAGAGGCACATTCTTaGTGTGGCTCAGGAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHEGGEAEGDGFAAVNSSSEAHS*CGSGVG Trigger: ACCGACTCCTGAGCCACATCAAGAATGTGCCTCTGA...ACTCGAATTCACAGCTGCGAATCCATCTCCCTCGGCCTCTCCACCTTCATGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCCTGGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTCCTGGGCAATGTCCTaGAAAAGCTGGATGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVPGSFPFGSSSEAHSWPSWAMS*KSWMDC Trigger: ACAGTCCATCCAGCTTTTTCAGGACATTGCCCAGGA...AGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCCATCCTCATATATGCTTTTCCCTaGGGAGTTGGGCCCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGDALAKLVEEDKVFPILIYAFP*GVGPSD Trigger: ATCACTGGGCCCAACTCCTCAGGGAAAAGCATATAT...GAGGATGGGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGTGCAGCTTGTCCTCATaGAGTCCAGCCCCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SIWFLLRSSFVALMGFPLCSLSS*SPAPQS Trigger: AGATTGAGGGGCTGGACTTCATGAGGACAAGCTGCA...CAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | CGCTGTTTGCTTATCTCTGGACCAAAATCCACGCTTGGCAGAAGTATGATTTCAGAGGGCTGGGGAAGCTaGCTGAGGGGATTCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RCLLISGPKSTLGRSMISEGWGS*LRGFRI Trigger: GATCCGGAATCCCCTCAGCCAGCTTCCCCAGCCCTC...TGAAATCATACTTCTGCCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172491.2 ENSMUST00000174556.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGAATTCATCGATCACTGTTTGCTTATCTCTaGACCAAAATCCACGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEVPGHPPSWSPSRIHRSLFAYL*TKIHAW Trigger: CCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAG...TGATCGATGAATTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCCATCCTCTCACTGACCTTGGTGTaGGACAACTTCATGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGDALAKLVEEDKVFPILSLTLV*DNFMRF Trigger: GAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGA...GAGGATGGGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCAGGAAGCCCAGCCTaGGCCGCTGTGTGGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSGSPA*AAVWEA Trigger: CGCCTCCCACACAGCGGCCCAGGCTGGGCTTCCTGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | GTCTTCCCCATCCTCACAAGTCTCCATGGTCAAATACTGCACCAGGGGTCCTTGAGCAGTCATGGAGTCTaGGATGAAGGAGTAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFPILTSLHGQILHQGSLSSHGV*DEGVVS Trigger: GGAAACTACTCCTTCATCTCAGACTCCATGACTGCT...CAAGGACCCCTGGTGCAGTATTTGACCATGGAGACTTGTGAGGATGGGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCAGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSIWFLLRSSFVALMGFPVDDTA*GDARVQ Trigger: CTGGACTCTCGCATCCCCTCATGCAGTGTCATCTAC...TGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATTGGGGGCTGAGGGCTaGGGAAGCTGGCTGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKLGAEG*GSWLRG Trigger: TCCCCTCAGCCAGCTTCCCCAGCCCTCAGCCCCCAA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGTAATGCGGTCTCGAATAGCCGTAGTCCCGGGCAGCACTGGCAAGAGTCTATGCTCACCAGATaGGTCAATACAAACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RESNAVSNSRSPGQHWQESMLTR*VNTNFL Trigger: CAAGAAGTTTGTATTGACCCATCTGGTGAGCATAGA...CTCTTGCCAGTGCTGCCCGGGACTACGGCTATTCGAGACCGCATTACTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTCCCCATCCTCACAAGTCTCCATGGTCAAATACTGCACCAGGGGTCCTTCACTGACCTTGGTGTaGGACAACTTCATGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSPSSQVSMVKYCTRGPSLTLV*DNFMRF Trigger: GAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGA...AGGACCCCTGGTGCAGTATTTGACCATGGAGACTTGTGAGGATGGGGAAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| 3UTR CAA 72 bp | TTTGGGACAGGATTTCATTCTATAGTCCTGGCTGGCTaGCAACTCACAGAGACCCACCTGCCTCTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FGTGFHSIVLAG*QLTETHLPLSP Trigger: TGGAGACAGAGGCAGGTGGGTCTCTGTGAGTTGCAAGCCAGCCAGGACTATAGAATGAAATCCTGTCCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| CDS-3UTR TCA 90 bp | TATCCACCAGTGCCTGGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGGGCATCAGGAAGAACTaGATGACATCCAGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YPPVPGSFPFGSSSEAHSGIRKN*MTSSRE Trigger: TTCCCGACTGGATGTCATTCAGTTCTTCCTGATGCC...CGAATGAGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACCCAGTGCTAGCCAGTaGCGGAGCACAGCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKPSASQ*RSTAAR Trigger: TCTGGCTGCTGTGCTCCGTCACTGGCTAGCACTGGG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGAGACCTCTTTGCCACGAGCAATGAGTGGGTCAGGAAGCCCAGCCTGGAAAGGAGACGCTGTTTaGTTATCTCTGGACCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSETSLPRAMSGSGSPAWKGDAV*LSLDQN Trigger: ATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTTT...CCAGGCTGGGCTTCCTGACCCACTCATTGCTCGTGGCAAAGAGGTCTCAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCCATCAAGTGTCTTGATCTATaGTCACCAGATGGGTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GTGDALAKLVEEDKVFPIKCLDL*SPDGSI Trigger: TATTGACCCATCTGGTGAGCATAGATCAAGACACTT...GATGGGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCCCGGATCTCGCAGTaGAGGTCTCCCAGCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSRISQ*RSPSSV Trigger: CACGCTGCTGGGAGACCTGCACTGCGAGATCCGGGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACAAGACCGAAGCCCGTaGCAGCACCTGGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKQDRSP*QHLALQ Trigger: CTGCAGTGCCAGGTGCTGGCACGGGCTTCGGTCTTG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGAGGGCTGGGGAAGCTaGCTGAGGGGATTCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKEGWGS*LRGFRI Trigger: GATCCGGAATCCCCTCAGCCAGCTTCCCCAGCCCTC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATGAAAATGTCCAGGTCCAGGGTGGGATCCTCCAAGTCCAGTTTTAGAAACGTAAGCTTTAGGCTCTCGTaGTCTGGGGCATCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: MKMSRSRVGSSKSSFRNVSFRLS*SGASGM Trigger: CATGCCAGATGCCCCAGACCACGAGAGCCTAAAGCT...TACGTTTCTAAAACTGGACTTGGAGGATCCCACCCTGGACCTGGACATTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTGGCATTGTTCACTGCTTTTCATCCAGAACTCTCTaGAGAAGCTTTAGGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PEFIDQDQRVLCGIVHCFSSRTL*RSFRLS Trigger: CGAGAGCCTAAAGCTTCTCCAGAGAGTTCTGGATGA...AAAGCAGTGAACAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGCCCGTGCCAGCACCTaGCACTGCAGCTGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKARAST*HCSWYI Trigger: GATGTACCAGCTGCAGTGCCAGGTGCTGGCACGGGC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| 3UTR CAA 72 bp | AATTCATCGATCAGGACCAGCGAGTGCTCTGTGGCATaGTTCACTGCTTTCGCCACCTGGTTGAGATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: NSSIRTSECSVA*FTAFATWLRSI Trigger: GATTGATCTCAACCAGGTGGCGAAAGCAGTGAACAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | AATCATGAAGGTGGAGAGGCCGAGGGAGATGGATTCGCAGCTGTGAATTCGAGTGGTGAGACTCACTCTTaGAAATCTGTAGAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHEGGEAEGDGFAAVNSSGETHS*KSVERC Trigger: ACAGCGTTCTACAGATTTTCAAGAGTGAGTCTCACC...ACTCGAATTCACAGCTGCGAATCCATCTCCCTCGGCCTCTCCACCTTCATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTGGCATTGAAAGGAGACGCTGTTTaGTTATCTCTGGACCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVPFPNSSIRTSECSVALKGDAV*LSLDQN Trigger: ATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTTT...CAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGCGGATCAAGTCTACCAAAATCCACGCTTaGCAGAAGTATGATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRSSFVALMGFPLRIKSTKIHA*QKYDFR Trigger: CCTGAAATCATACTTCTGCCAAGCGTGGATTTTGGT...AGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | CGGATCAAGTCTGAGACCTCTTTGCCACGAGCAATGAGTGGGTCAGGAAGCCCATCTATGCTCACCAGATaGGTCAATACAAACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIKSETSLPRAMSGSGSPSMLTR*VNTNFL Trigger: CAAGAAGTTTGTATTGACCCATCTGGTGAGCATAGA...TGGGCTTCCTGACCCACTCATTGCTCGTGGCAAAGAGGTCTCAGACTTGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGCGTGTCCAGCTCCTTaGTCCGGGCGCTACGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKACPAP*SGRYDS Trigger: ACTATCGTAGCGCCCGGACCAAGGAGCTGGACACGC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAGTCCCGGGCAGCACTaGCAAGAGCCAACAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSPGQH*QEPTGR Trigger: ACGTCCTGTTGGCTCTTGCCAGTGCTGCCCGGGACT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAACTTTGACCCTGCCCTaGTCCCCACCACAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKTLTLP*SPPQSV Trigger: CACGGACTGTGGTGGGGACCAGGGCAGGGTCAAAGT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGCCACGAGCAATGAGTaGGTCAGGAAGCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKATSNE*VRKPSL Trigger: CAGGCTGGGCTTCCTGACCCACTCATTGCTCGTGGC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| 3UTR CAA 72 bp | GGAAGGTTACAAGTCACTTCTTCTCTCATCTTGACTTaGCTTGGGGAGCGTGGTACTGTATACCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQVTSSLILT*LGERGTVYLSS Trigger: GCTGCTCAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTGACTTGTAACCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| 3UTR CAA 72 bp | GGGATGGGAAGGTTACAAGTCACTTCTTCTCTCATCTaGACTTTGCTTGGGGAGCGTGGTACTGTATACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GMGRLQVTSSLI*TLLGERGTVYL Trigger: CAGGTATACAGTACCACGCTCCCCAAGCAAAGTCAAGATGAGAGAAGAAGTGACTTGTAACCTTCCCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACAAGTGCCCGGACCGTaGGGACACAGTCAAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKQVPGP*GHSQRE Trigger: TTCCCTTTGACTGTGTCCTCACGGTCCGGGCACTTG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKGPASH*PWCGTT Trigger: AGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATGAAAATGTCCAGGTCCAGGGTGGGATCCTCCAAGTCCAGTTTTAGAAACGTATTCTCCAGCTCCTTCTaGGCAACTTCAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MKMSRSRVGSSKSSFRNVFSSSF*ATSVRK Trigger: CTTCCTCACTGAAGTTGCTCAGAAGGAGCTGGAGAA...TACGTTTCTAAAACTGGACTTGGAGGATCCCACCCTGGACCTGGACATTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACTTTGCCACGAGCAATaGGTGGGTCAGGAAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKLCHEQ*VGQEAQ Trigger: CTGGGCTTCCTGACCCACTCATTGCTCGTGGCAAAG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAATCTCGGCCTCCTCTaGAGGCACGAAACTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKNLGLL*RHETAH Trigger: GTGGGCAGTTTCGTGCCTGCAGAGGAGGCCGAGATT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKVDDTA*GDARVQ Trigger: CTGGACTCTCGCATCCCCTCATGCAGTGTCATCTAC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000174026.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAGCTTTAGGCTCTCGTaGTCTGGGGCATCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSFRLS*SGASGM Trigger: CATGCCAGATGCCCCAGACCACGAGAGCCTAAAGCT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | TTTTCCATTTGGTTCCTCCTCAGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGTTTGCTTATCTCTaGACCAAAATCCACGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSIWFLLRSSFVALMGFPLFAYL*TKIHAW Trigger: CCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAG...TGGGAAACCCATCAAGGCCACGAATGAGCTTCTGAGGAGGAACCAAATGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGGCACATTCTTGATGTaGCTCAGGAGTCGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKGTFLM*LRSRCS Trigger: GCTGCACCGACTCCTGAGCCACATCAAGAATGTGCC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| 3UTR CAA 72 bp | AGCTTCCCTAGAAATCGAGTCATAGCCTCATCCTGTTaGGCACTTGTGACAACAGACTGGGGGTTGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPRNRVIASSC*ALVTTDWGLIS Trigger: TGAAATCAACCCCCAGTCTGTTGTCACAAGTGCCAAACAGGATGAGGCTATGACTCGATTTCTAGGGAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCAGAGGCACATTCTTaGTGTGGCTCAGGAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSEAHS*CGSGVG Trigger: ACCGACTCCTGAGCCACATCAAGAATGTGCCTCTGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGCGGGCAGCACTTCCTaGCTAATGAAAATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKAGSTS*LMKMSR Trigger: CCTGGACATTTTCATTAGTCAGGAAGTGCTGCCCGC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAGAGGCCGAGGGAGATaGATTCGCAGCTGTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKRGRGR*IRSCEF Trigger: GAATTCACAGCTGCGAATCCATCTCCCTCGGCCTCT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACGCTTGGCAGAAGTATaGTTTCAGGTCCCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKRLAEV*FQVPLA Trigger: AGCCAAAGGGACCTGAAATCATACTTCTGCCAAGCG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGGCATCAGGAAGAACTaGATGACATCCAGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKGIRKN*MTSSRE Trigger: TTCCCGACTGGATGTCATTCAGTTCTTCCTGATGCC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCCTGGGCAATGTCCTaGAAAAGCTGGATGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSWAMS*KSWMDC Trigger: ACAGTCCATCCAGCTTTTTCAGGACATTGCCCAGGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATTCTCCAGCTCCTTCTaGGCAACTTCAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKFSSSF*ATSVRK Trigger: CTTCCTCACTGAAGTTGCTCAGAAGGAGCTGGAGAA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000174026.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGTGCAGCTTGTCCTCTaGGAGAAACATGAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKVQLVL*EKHEVQ Trigger: CTGGACTTCATGTTTCTCTCAGAGGACAAGCTGCAC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAATGGATTCGCAGCTGTaGATTCGAGTGAAGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKMDSQL*IRVKMA Trigger: CGCCATCTTCACTCGAATTCACAGCTGCGAATCCAT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATGTGGCATTGTTCACTaGTTTCGCCACCTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKCGIVH*FRHLVE Trigger: CTCAACCAGGTGGCGAAAGCAGTGAACAATGCCACA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAATCAGGACCAGCGAGTaGTCTGTGGCATTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKIRTSE*SVALFT Trigger: AGTGAACAATGCCACAGAGCACTCGCTGGTCCTGAT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCCAAGTCCAGTTTTAGAAACGTATCCACCAGTGCCTGGCAGTTTTCCATTACCAAAATCCACGCTTaGCAGAAGTATGATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKSSFRNVSTSAWQFSITKIHA*QKYDFR Trigger: CCTGAAATCATACTTCTGCCAAGCGTGGATTTTGGT...AATGGAAAACTGCCAGGCACTGGTGGATACGTTTCTAAAACTGGACTTGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACCTCACAAGTCTCCATaGTCAAATACTGCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKPHKSP*SNTAPG Trigger: CCCTGGTGCAGTATTTGACCATGGAGACTTGTGAGG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAGCAGTCATGGAGTCTaGGATGAAGGAGTAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSSHGV*DEGVVS Trigger: GGAAACTACTCCTTCATCTCAGACTCCATGACTGCT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATTGTACACCGAGGGGTaGGACTCACTCTTGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKLYTEG*DSLLKI Trigger: GATTTTCAAGAGTGAGTCTCACCCCTCGGTGTACAA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAATATATGCTTTTCCCTaGGGAGTTGGGCCCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKIYAFP*GVGPSD Trigger: ATCACTGGGCCCAACTCCTCAGGGAAAAGCATATAT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGCATCTGGCATGAAGTaGATAGTGGAGTCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKASGMK*IVESLV Trigger: CACTAGTGACTCCACTATCCACTTCATGCCAGATGC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCATCCAGAACTCTCTaGAGAAGCTTTAGGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSSRTL*RSFRLS Trigger: CGAGAGCCTAAAGCTTCTCCAGAGAGTTCTGGATGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCACTGACCTTGGTGTaGGACAACTTCATGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSLTLV*DNFMRF Trigger: GAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGTATCCACCAGTGCCTaGCAGTTTTCCATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKVSTSA*QFSIWF Trigger: GAACCAAATGGAAAACTGCCAGGCACTGGTGGATAC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGGTGAGACTCACTCTTaGAAATCTGTAGAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKGETHS*KSVERC Trigger: ACAGCGTTCTACAGATTTTCAAGAGTGAGTCTCACC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCAAGCCTACCTGCTTaGGATATATGCTTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSSLPA*DICFSL Trigger: CAGGGAAAAGCATATATCTCAAGCAGGTAGGCTTGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATGTGGGACAACTTCATaGGTTTCAGAATCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKCGTTS*VSESEA Trigger: TGCCTCTGATTCTGAAACGCATGAAGTTGTCCCACA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAAACGTATCCACCAGTaGCTGGCAGTTTTCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKKRIHQ*LAVFHL Trigger: CAAATGGAAAACTGCCAGGCACTGGTGGATACGTTT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACTGTTTGCTTATCTCTaGACCAAAATCCACGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKLFAYL*TKIHAW Trigger: CCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAACCAAAATCCACGCTTaGCAGAAGTATGATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKTKIHA*QKYDFR Trigger: CCTGAAATCATACTTCTGCCAAGCGTGGATTTTGGT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAAAGGAGACGCTGTTTaGTTATCTCTGGACCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKKGDAV*LSLDQN Trigger: ATTTTGGTCCAGAGATAAGCAAACAGCGTCTCCTTT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR GCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAAGTGTCTTGATCTATaGTCACCAGATGGGTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKKCLDL*SPDGSI Trigger: TATTGACCCATCTGGTGAGCATAGATCAAGACACTT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATCTATGCTCACCAGATaGGTCAATACAAACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSTRHNVQTENSAVREKSMLTR*VNTNFL Trigger: CAAGAAGTTTGTATTGACCCATCTGGTGAGCATAGA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
||
| 3UTR CAA 72 bp | AGTCATATCAACCCAGACAAGTTAAACATGGACACATaGCACAGACAGAGGCAAACACTCCTATATATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHINPDKLNMDT*HRQRQTLLYIK Trigger: TTTGATATATAGGAGTGTTTGCCTCTGTCTGTGCAATGTGTCCATGTTTAACTTGTCTGGGTTGATATGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
||
| CDS CCA 90 bp | GCAGGTCGTCAGAGAACTCCTGGGCAATGTCCTGAAAAAGCTGGATaGACTGTGGCAGAGAACGGCAGGCATCCCTCAGGCCGAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGRQRTPGQCPEKAG*TVAENGRHPSGREH Trigger: GTGCTCTCGGCCTGAGGGATGCCTGCCGTTCTCTGCCACAGTCCATCCAGCTTTTTCAGGACATTGCCCAGGAGTTCTCTGACGACCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | AGCACAGCAGCCAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGAATACATCCAGTCGGGAATaGAGTTCCCTTAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: STAARSARPSTELVPFPNTSSRE*SSLSSR Trigger: CCGGGAGCTAAGGGAACTCAATTCCCGACTGGATGT...ATTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCACTTCTGGCTGCTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS TCA 90 bp | TGCTCCCCTGCACTCGCTCACCAGAGGGATGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAGGTTCTCCAGCTCCTTCTGAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CSPALAHQRDVDDTA*GDARVQVLQLLLSN Trigger: GTTGCTCAGAAGGAGCTGGAGAACCTGGACTCTCGCATCCCCTCATGCAGTGTCATCTACATCCCTCTGGTGAGCGAGTGCAGGGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAACATCCAGTCGGGAATaGAGTTCCCTTAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VPGHPPSWSPSRIHRSGPTSSRE*SSLSSR Trigger: CCGGGAGCTAAGGGAACTCAATTCCCGACTGGATGT...TGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | GCCAACAGGACGTCCAGGCGGGAGGCAAGGTCCAATACCCGAGTCAAGACCGAAATCAGAGGCACATTCTaGATGTGGCTCAGGAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ANRTSRREARSNTRVKTEIRGTF*MWLRSR Trigger: CCGACTCCTGAGCCACATCAAGAATGTGCCTCTGAT...TTCGGTCTTGACTCGGGTATTGGACCTTGCCTCCCGCCTGGACGTCCTGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTCATTCGTGGCCTTGATGGGTTTCCCACTGCGGATCAAGTCTGAGACCGGCCCAGTGATGACTTaGACCCTGCCCTGGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSSFVALMGFPLRIKSETGPVMT*TLPWSP Trigger: TGGGGACCAGGGCAGGGTCAAAGTCATCACTGGGCC...GGTCTCAGACTTGATCCGCAGTGGGAAACCCATCAAGGCCACGAATGAGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS TCA 90 bp | ACACTGCATGAGGGGATGCGAGAGTCCAGGTTCTCCAGCTCCTTCTaGGCAACTTCAGTGAGGAAGCTCGGAAGCCCTATCAGCCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TLHEGMRESRFSSSF*ATSVRKLGSPISLR Trigger: GCGAAGGCTGATAGGGCTTCCGAGCTTCCTCACTGAAGTTGCTCAGAAGGAGCTGGAGAACCTGGACTCTCGCATCCCCTCATGCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
||
| CDS TCA 90 bp | CCGAGGGAGATGGATTCGCAGCTGCTTGAGATATATGCTTTTCCCTaGGGAGTTGGGCCCAGTGATGACTTTGACCCTGCCCTGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PREMDSQLLEIYAFP*GVGPSDDFDPALVP Trigger: GGGGACCAGGGCAGGGTCAAAGTCATCACTGGGCCCAACTCCTCAGGGAAAAGCATATATCTCAAGCAGCTGCGAATCCATCTCCCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS CCA 90 bp | GTCAGAGAACTCCTGGGCAATGTCCTGAAAAAGCTGGATGGACTGTaGCAGAGAACGGCAGGCATCCCTCAGGCCGAGAGCACTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: VRELLGNVLKKLDGL*QRTAGIPQAESTVH Trigger: GTGTACAGTGCTCTCGGCCTGAGGGATGCCTGCCGTTCTCTGCCACAGTCCATCCAGCTTTTTCAGGACATTGCCCAGGAGTTCTCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGTGCCAGGCCATCCACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGCTTTTCCCTGAGGAGTaGGGCCCAGTGATGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QKCQAIHRVGPLPEFIDQLFPEE*GPVMTL Trigger: CAAAGTCATCACTGGGCCCAACTCCTCAGGGAAAAG...CTGATCGATGAATTCGGGAAGGGGACCAACTCGGTGGATGGCCTGGCACTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
||
| CDS TCA 90 bp | GGCCGAGAGCACTGTACACAGTCTTGTAGAGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACTTCATGCGTTTCAGAATCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GREHCTQSCRGPASH*PWCGTTSCVSESEA Trigger: TGCCTCTGATTCTGAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCCTCTACAAGACTGTGTACAGTGCTCTCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACCAGCGAGTGCTCTGTGGCATTGTTCACTGCTTTCGCCACCTGGTTGAGACAACAGACTGGGGGTaGATTTCATCCAGAACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QDQRVLCGIVHCFRHLVETTDWG*ISSRTL Trigger: GAGAGTTCTGGATGAAATCAACCCCCAGTCTGTTGT...CTCAACCAGGTGGCGAAAGCAGTGAACAATGCCACAGAGCACTCGCTGGTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGGCACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCAACGCTGTAAGTGTCTaGATCTATGCTCACCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GWHWRRLGKAGRRRQGLPNAVSV*IYAHQM Trigger: CATCTGGTGAGCATAGATCAAGACACTTACAGCGTT...GGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTGGCATTGTTTTACAGCGGCATCTGTaGAGGATTCCAAAAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLPEFIDQDQRVLCGIVLQRHL*RIPKRL Trigger: CAGCCTTTTTGGAATCCTCAACAGATGCCGCTGTAA...AACAATGCCACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
||
| CDS-3UTR CAA 90 bp | CACCGAGTTGGTCCCCTTCCCGAATTCATCGATCAGGACCAGCGAGTGCTCTGTTGGATTCGCAGCTGCTaGAGATATATGCTTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRVGPLPEFIDQDQRVLCWIRSC*RYMLFP Trigger: AGGGAAAAGCATATATCTCAAGCAGCTGCGAATCCA...ACAGAGCACTCGCTGGTCCTGATCGATGAATTCGGGAAGGGGACCAACTCGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
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| CDS TCA 90 bp | AATGGAAAGAAGGAAGCCAATCAGAGGGATGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAGGTTCTCCAGCTCCTTCTGAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: NGKKEANQRDVDDTA*GDARVQVLQLLLSN Trigger: GTTGCTCAGAAGGAGCTGGAGAACCTGGACTCTCGCATCCCCTCATGCAGTGTCATCTACATCCCTCTGATTGGCTTCCTTCTTTCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CAA 90 bp | ACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCCATCCTCGTCAATACAAACTTCTaGAATCCCAGGATAGGGACG | + |
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Preference number: 5 (lower is better) Translates to: TGDALAKLVEEDKVFPILVNTNF*NPRIGT Trigger: CGTCCCTATCCTGGGATTCAAGAAGTTTGTATTGAC...GAGGATGGGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CAA 90 bp | CACTGGCGACGCCTTGGCAAAGCTGGTAGAAGAAGACAAGGTCTTCCCCATCCTGTCAATACAAACTTCTaGAATCCCAGGATAGGGACG | + |
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Preference number: 5 (lower is better) Translates to: HWRRLGKAGRRRQGLPHPVNTNF*NPRIGT Trigger: CGTCCCTATCCTGGGATTCAAGAAGTTTGTATTGAC...AGGATGGGGAAGACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCCATCCTCACAAGTCTCCATGGTCAAATACTGCACCAGGGGTCCTTGCGAACGCTGTAAGTGTCTaGATCTATGCTCACCAGATG | + |
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Preference number: 5 (lower is better) Translates to: LPHPHKSPWSNTAPGVLANAVSV*IYAHQM Trigger: CATCTGGTGAGCATAGATCAAGACACTTACAGCGTT...CGCAAGGACCCCTGGTGCAGTATTTGACCATGGAGACTTGTGAGGATGGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CAA 90 bp | TTCCCACTGCGGATCAAGTCTGAGACCTCTTTGCCACGAGCAATGAGTGGGTCATTACAGCGGCATCTGTaGAGGATTCCAAAAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FPLRIKSETSLPRAMSGSLQRHL*RIPKRL Trigger: CAGCCTTTTTGGAATCCTCAACAGATGCCGCTGTAA...TGACCCACTCATTGCTCGTGGCAAAGAGGTCTCAGACTTGATCCGCAGTGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGGCCCAGTGATGACTTaGACCCTGCCCTGGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKGPVMT*TLPWSP Trigger: TGGGGACCAGGGCAGGGTCAAAGTCATCACTGGGCC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | GAAACGTATCCACCAGTGCCTGGCAGTTTTCCATTTGGTTCCTCCTCAGAAGCTACAACAGACTGGGGGTaGATTTCATCCAGAACTCTC | + |
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Preference number: 5 (lower is better) Translates to: ETYPPVPGSFPFGSSSEATTDWG*ISSRTL Trigger: GAGAGTTCTGGATGAAATCAACCCCCAGTCTGTTGT...AGCTTCTGAGGAGGAACCAAATGGAAAACTGCCAGGCACTGGTGGATACGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CAA 90 bp | ATGAAAATGTCCAGGTCCAGGGTGGGATCCTCCAAGTCCAGTTTTAGAAACGTAATCAGAGGCACATTCTaGATGTGGCTCAGGAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: MKMSRSRVGSSKSSFRNVIRGTF*MWLRSR Trigger: CCGACTCCTGAGCCACATCAAGAATGTGCCTCTGAT...TACGTTTCTAAAACTGGACTTGGAGGATCCCACCCTGGACCTGGACATTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGGCACTGGCGACGCCTaGGCAAAGCTGGTAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKGTGDA*AKLVEE Trigger: TTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAACATCCAGTCGGGAATaGAGTTCCCTTAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKTSSRE*SSLSSR Trigger: CCGGGAGCTAAGGGAACTCAATTCCCGACTGGATGT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGAGTGCTCTGTGGCATaGTTCACTGCTTTCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKECSVA*FTAFAT Trigger: GGTGGCGAAAGCAGTGAACAATGCCACAGAGCACTC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | CTGTTTGCTTATCTCTGGACCAAAATCCACGCTTGGCAGAAGTATGATTTCAGGACAACAGACTGGGGGTaGATTTCATCCAGAACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFAYLWTKIHAWQKYDFRTTDWG*ISSRTR Trigger: CCGAGTTCTGGATGAAATCAACCCCCAGTCTGTTGT...CCTGAAATCATACTTCTGCCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172491.2 |
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| CDS-3UTR CAA 90 bp | CGCTGTTTGCTTATCTCTGGACCAAAATCCACGCTTGGCAGAAGTATGATTTCAATAGCCTCATCCTGTTaGGCACTTGTGACAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RCLLISGPKSTLGRSMISIASSC*ALVTTD Trigger: GTCTGTTGTCACAAGTGCCAAACAGGATGAGGCTAT...TGAAATCATACTTCTGCCAAGCGTGGATTTTGGTCCAGAGATAAGCAAACAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172491.2 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAATCAGAGGCACATTCTaGATGTGGCTCAGGAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKIRGTF*MWLRSR Trigger: CCGACTCCTGAGCCACATCAAGAATGTGCCTCTGAT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAACTTTTCCCTGAGGAGTaGGGCCCAGTGATGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKLFPEE*GPVMTL Trigger: CAAAGTCATCACTGGGCCCAACTCCTCAGGGAAAAG...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAACAAGGCTCAGGAAGTaGGTGGCTACAAAGACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKTRLRK*VATKTW Trigger: CCACGTCTTTGTAGCCACCAACTTCCTGAGCCTTGT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGCTTTCGCCACCTGGTaGAGATCAATCATGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKAFATW*RSIMKV Trigger: CACCTTCATGATTGATCTCAACCAGGTGGCGAAAGC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAACAACAGACTGGGGGTaGATTTCATCCAGAACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKTTDWG*ISSRTL Trigger: GAGAGTTCTGGATGAAATCAACCCCCAGTCTGTTGT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAATAGCCTCATCCTGTTaGGCACTTGTGACAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKIASSC*ALVTTD Trigger: GTCTGTTGTCACAAGTGCCAAACAGGATGAGGCTAT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAATTACAGCGGCATCTGTaGAGGATTCCAAAAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKLQRHL*RIPKRL Trigger: CAGCCTTTTTGGAATCCTCAACAGATGCCGCTGTAA...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAGTCAATACAAACTTCTaGAATCCCAGGATAGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKVNTNF*NPRIGT Trigger: CGTCCCTATCCTGGGATTCAAGAAGTTTGTATTGAC...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS-3UTR CAA 90 bp | ATTCCTAGCACAAGACACAATGTGCAAACTGAGAACTCTGCAGTAAGGGAAAAAAACGCTGTAAGTGTCTaGATCTATGCTCACCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTRHNVQTENSAVREKNAVSV*IYAHQM Trigger: CATCTGGTGAGCATAGATCAAGACACTTACAGCGTT...TTTTTCCCTTACTGCAGAGTTCTCAGTTTGCACATTGTGTCTTGTGCTAGGAAT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 |
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| CDS CCA 72 bp | ATGCCCAGGTATCCCGAGCTCCACAGCACGCACAGATaGATCTCCAGGCCCCGCCATTGGGGGCTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: MPRYPELHSTHR*ISRPRHWGLRA Trigger: AGCCCTCAGCCCCCAATGGCGGGGCCTGGAGATCCATCTGTGCGTGCTGTGGAGCTCGGGATACCTGGGCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174556.8 |
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| CDS CCA 72 bp | CTCCTGGGCAATGTCCTGAAAAAGCTGGATGGACTGTaGCAGAGAACGGCAGGCATCCCTCAGGCCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLGNVLKKLDGL*QRTAGIPQAES Trigger: GCTCTCGGCCTGAGGGATGCCTGCCGTTCTCTGCCACAGTCCATCCAGCTTTTTCAGGACATTGCCCAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS TCA 72 bp | GAGGGGATGCGAGAGTCCAGGTTCTCCAGCTCCTTCTaGGCAACTTCAGTGAGGAAGCTCGGAAGCCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: EGMRESRFSSSF*ATSVRKLGSPI Trigger: GATAGGGCTTCCGAGCTTCCTCACTGAAGTTGCTCAGAAGGAGCTGGAGAACCTGGACTCTCGCATCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| CDS TCA 72 bp | GGTGGAGAGGCCGAGGGAGATGGATTCGCAGCTGCTTaGGATATATGCTTTTCCCTGAGGAGTTGGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GGEAEGDGFAAA*DICFSLRSWAQ Trigger: CTGGGCCCAACTCCTCAGGGAAAAGCATATATCTCAAGCAGCTGCGAATCCATCTCCCTCGGCCTCTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172536.2 |
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| CDS TCA 72 bp | GCACTCGCTCACCAGAGGGATGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAGGTTCTCCAGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ALAHQRDVDDTA*GDARVQVLQLL Trigger: AAGGAGCTGGAGAACCTGGACTCTCGCATCCCCTCATGCAGTGTCATCTACATCCCTCTGGTGAGCGAGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174026.8 |
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| CDS CCA 72 bp | CAGAGAACTCCTGGGCAATGTCCTGAAAAAGCTGGATaGACTGTGGCAGAGAACGGCAGGCATCCCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRTPGQCPEKAG*TVAENGRHPSG Trigger: GCCTGAGGGATGCCTGCCGTTCTCTGCCACAGTCCATCCAGCTTTTTCAGGACATTGCCCAGGAGTTCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS TCA 72 bp | AAGGAAGCCAATCAGAGGGATGTAGATGACACTGCATaGGGGGATGCGAGAGTCCAGGTTCTCCAGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KEANQRDVDDTA*GDARVQVLQLL Trigger: AAGGAGCTGGAGAACCTGGACTCTCGCATCCCCTCATGCAGTGTCATCTACATCCCTCTGATTGGCTTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS CCA 72 bp | ATAGCCTCATCCTGTTTGGCACTTGTGACAACAGACTaGGGGTTGATTTCATCCAGAACTCGGCGGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IASSCLALVTTD*GLISSRTRRAP Trigger: AGGAGCCCGCCGAGTTCTGGATGAAATCAACCCCCAGTCTGTTGTCACAAGTGCCAAACAGGATGAGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172491.2 |
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| CDS CAA 72 bp | GTGAGGAAGCTCGGAAGCCCTATCAGCCTTCGCTTCTaGGCATCTATGTCAGGGTCTATGTTAGGGAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: VRKLGSPISLRF*ASMSGSMLGRT Trigger: AGTCCTCCCTAACATAGACCCTGACATAGATGCCAAGAAGCGAAGGCTGATAGGGCTTCCGAGCTTCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| CDS CAA 90 bp | GCAACTTCAGTGAGGAAGCTCGGAAGCCCTATCAGCCTTCGCTTCTaGGCATCTATGTCAGGGTCTATGTTAGGGAGGACTGTGAAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ATSVRKLGSPISLRF*ASMSGSMLGRTVKR Trigger: TCGCTTCACAGTCCTCCCTAACATAGACCCTGACATAGATGCCAAGAAGCGAAGGCTGATAGGGCTTCCGAGCTTCCTCACTGAAGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174026.8 ENSMUST00000174603.8 |
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| CDS TCA 72 bp | CACTGTACACAGTCTTGTAGAGGACCTGCCAGTCACTaGCCTTGGTGTGGGACAACTTCATGCGTTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HCTQSCRGPASH*PWCGTTSCVSE Trigger: TTCTGAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTCCTCTACAAGACTGTGTACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
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| CDS TCA 72 bp | TGGCTACTTTGTACACCGAGGGGTGAGACTCACTCTTaGAAATCTGTAGAACGCTGTAAGTGTCTTGATCTA | + |
|
Preference number: 6 (lower is better) Translates to: WLLCTPRGETHS*KSVERCKCLDL Trigger: TAGATCAAGACACTTACAGCGTTCTACAGATTTTCAAGAGTGAGTCTCACCCCTCGGTGTACAAAGTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007250.14 ENSMUST00000097338.11 ENSMUST00000172536.2 ENSMUST00000174603.8 |
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