Pregenerated sensors for MSH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024151Ensembl transcript IDs: ENSMUST00000024967.14, ENSMUST00000172855.2, ENSMUST00000174703.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTTTTCAAAGTGCACGTCATTTGGAATAAATGCAACTTCATCTTaGACTTCAACACAAGCATGCCTGGAGGCTTTCAATATAATTCTC | + |
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Preference number: 1 (lower is better) Translates to: SFSKCTSFGINATSS*TSTQACLEAFNIIL Trigger: GAGAATTATATTGAAAGCCTCCAGGCATGCTTGTGTTGAAGTTCAAGATGAAGTTGCATTTATTCCAAATGACGTGCACTTTGAAAAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174703.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAACTTCATCTTGAACTTCAACACAAGCATGCCTGGAGGCTTTCAATATAATTGGCTCTACGTAGCCTaGGGAAATATTGACAATTTC | + |
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Preference number: 2 (lower is better) Translates to: CNFILNFNTSMPGGFQYNWLYVA*GNIDNF Trigger: GAAATTGTCAATATTTCCTCAGGCTACGTAGAGCCA...ATTATATTGAAAGCCTCCAGGCATGCTTGTGTTGAAGTTCAAGATGAAGTTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174703.2 |
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| 3UTR TCA 72 bp | AAGTGCACGTCATTTGGAATAAATGCAACTTCATCTTaGACTTCAACACAAGCATGCCTGGAGGCTTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: KCTSFGINATSS*TSTQACLEAFN Trigger: ATTGAAAGCCTCCAGGCATGCTTGTGTTGAAGTTCAAGATGAAGTTGCATTTATTCCAAATGACGTGCACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174703.2 |
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| CDS-3UTR GCA 90 bp | CCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCACTGTCAGAGGCGCACCGTGGTaGTCGGCTTCTCCGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: PRTAHSKGELPRARPPTVRGAPW*SASPAC Trigger: GCATGCCGGAGAAGCCGAGCACCACGGTGCGCCTCT...GACAGTGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGTCACGCCCTGGGTCTTaGACACCTCGCGGGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TLPDAARPGSSGEHYPEQSRPGS*TPRGPP Trigger: TGGCGGCCCGCGAGGTGTTCAAGACCCAGGGCGTGA...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | CCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCACTGTCGCCGCGCCTTCCAACTaGAGCGTCTCCTTAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRTAHSKGELPRARPPTVAAPSN*SVSLGC Trigger: GCAGCCTAAGGAGACGCTGCAGTTGGAAGGCGCGGC...GACAGTGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | TTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGCACAAATGCGGCCAGAGACTaGGAGCCAGTGGTGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FRMLLGQVPVGSTTQNSTNAARD*EPVVSS Trigger: TGAAGACACCACTGGCTCTCAGTCTCTGGCCGCATT...TGTGCTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | TTCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGAGACGCCTTTCAGTTaGCTGTCACCAGCCCCGACT | + |
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Preference number: 4 (lower is better) Translates to: FQWGALPRTAHSKGELPRETPFS*LSPAPT Trigger: AGTCGGGGCTGGTGACAGTCAACTGAAAGGCGTCTC...ACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | TTCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTTCGGCTTCTCCGGCATaGCCTCAAAGAAGCGCACGA | + |
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Preference number: 4 (lower is better) Translates to: FQWGALPRTAHSKGELPRSASPA*PQRSAR Trigger: TCGTGCGCTTCTTTGAGGGCATGCCGGAGAAGCCGA...ACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | CCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCACTGTCCCTCTCTGGATAACCTaGCTCAGTTTCCCCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: PRTAHSKGELPRARPPTVPLWIT*LSFPMS Trigger: AGACATGGGGAAACTGAGGCAGGTTATCCAGAGAGG...GACAGTGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | TCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGTACTTGATCACGCCCTaGGTCTTGAACACCTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: SSGEHYPEQHTVKVSSPVYLITP*VLNTSR Trigger: CCGCGAGGTGTTCAAGACCCAGGGCGTGATCAAGTA...CACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | GGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCGGATGCAATCCACAATaGACACTTCTGCCGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: GEHYPEQHTVKVSSPVHAGCNPQ*TLLPTH Trigger: GTGAGTCGGCAGAAGTGTCCATTGTGGATTGCATCC...GGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | GGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCACTCTGCCTCAGTTCTaGATCCTCGACAAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GEHYPEQHTVKVSSPVHATLPQF*ILDKSF Trigger: GAAGCTTTTGTCGAGGATTCAGAACTGAGGCAGAGT...GGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | TTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGCACACTTTGGTTGCTGACCTaGGGATGGAAGCAGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FRMLLGQVPVGSTTQNSTLWLLT*GWKQSP Trigger: TGGAGACTGCTTCCATCCTCAGGTCAGCAACCAAAG...TGTGCTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | GGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCGACTCGAGCAAGGATaGAATCCACAATGGACACTT | + |
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Preference number: 4 (lower is better) Translates to: GEHYPEQHTVKVSSPVHARLEQG*NPQWTL Trigger: AAGTGTCCATTGTGGATTGCATCCTTGCTCGAGTCG...GGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGGCAGTAAAGGGCACCTaGTTGACCTTCGACAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TLPDAARPGSSGEHYPEQAVKGT*LTFDRN Trigger: GTTCCTGTCGAAGGTCAAGCAGGTGCCCTTTACTGC...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | AGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACCTATCCATGAGCGGCTaGTTGATCCACTGGTTAACC | + |
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Preference number: 4 (lower is better) Translates to: SGEHYPEQHTVKVSSPVHLSMSG*LIHWLT Trigger: GGTTAACCAGTGGATCAAGCAGCCGCTCATGGATAG...GTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTACGAAGAGGCGCACCGTaGTGCTCGGCTTCTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: KFSIVLTVARPHLNSTQLRRGAP*CSASPA Trigger: TGCCGGAGAAGCCGAGCACCACGGTGCGCCTCTTCG...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | AGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACTCCTTTGGTCCAATCTaGATCAGAAGAGCCTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: SGEHYPEQHTVKVSSPVHSFGPI*IRRASR Trigger: TCTCGAGGCTCTTCTGATTCAGATTGGACCAAAGGA...GTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | CACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCAACTTCATGTACTGGCTaGAGTCAAAAGTGGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: HYPEQHTVKVSSPVHAHPTSCTG*SQKWPV Trigger: AACTGGCCACTTTTGACTTCAGCCAGTACATGAAGT...TGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGGGATGTCCACTGTGCTaGAGTTCTTGTTGTTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: TLPDAARPGSSGEHYPEQGCPLC*SSCCCE Trigger: TTCGCAACAACAAGAACTTCAGCACAGTGGACATCC...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | GGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCATAATTTTCTCACCTTaGTCTCTTTCCAGGCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: GEHYPEQHTVKVSSPVHAIIFSP*SLSRQR Trigger: ACGCTGCCTGGAAAGAGAGCAAGGTGAGAAAATTAT...GGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGAGAATCCCTCCTCTCTaGATAACCTGCCTCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLPDAARPGSSGEHYPEQRIPPL*ITCLSF Trigger: GAAACTGAGGCAGGTTATCCAGAGAGGAGGGATTCT...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | AAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACGAGACTGAGAGCCAGTaGTGTCTTCAACAGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: KHFRMLLGQVPVGSTTQNETESQ*CLQQNP Trigger: AGGGTTCTGTTGAAGACACCACTGGCTCTCAGTCTC...GTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | TTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGCACAAGGATGTCTTCAAACTaGGAAAGATTGCCGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: FRMLLGQVPVGSTTQNSTRMSSN*ERLPGE Trigger: TTCTCCCGGCAATCTTTCTCAGTTTGAAGACATCCT...TGTGCTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | TTCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGATGAAACTGCAACCTaGTTCTCCATCTCTGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FQWGALPRTAHSKGELPRDETAT*FSISGR Trigger: CCTACCAGAGATGGAGAATCAGGTTGCAGTTTCATC...ACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | CCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCACTGTCTCGTGGTTTTCCACCTaGTCCATATCTAAAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PRTAHSKGELPRARPPTVSWFST*SISKVV Trigger: AACAACTTTAGATATGGATCAGGTGGAAAACCACGA...GACAGTGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | CACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCATTCCTTTCTCCAAGATaGCTGGTCGTACATAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HYPEQHTVKVSSPVHAHPFLSPR*LVVHKE Trigger: TTCCTTATGTACGACCAGTCATCTTGGAGAAAGGAA...TGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | CACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCAACAATCACCCCGGTCTaGCGAATGTATGTTGATTTA | + |
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Preference number: 4 (lower is better) Translates to: HYPEQHTVKVSSPVHAHPTITPV*RMYVDL Trigger: TAAATCAACATACATTCGTCAGACCGGGGTGATTGT...TGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGGGGAGAAGCCTTAAATaGCAGATACCACTCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: TLPDAARPGSSGEHYPEQGRSLK*QIPLIL Trigger: GAGAATGAGTGGTATCTGGCATTTAAGGCTTCTCCC...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | AAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGGAGTCACAAAAACTaGCAACAACAGTGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KHFRMLLGQVPVGSTTQNRSHKN*QQQCLV Trigger: CACCAGGCACTGTTGTTGGCAGTTTTTGTGACTCCT...GTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGAATGGGTGGCAAACATaGAAAAGGCACCAATCTTCG | + |
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Preference number: 4 (lower is better) Translates to: TLPDAARPGSSGEHYPEQNGWQT*KRHQSS Trigger: CGAAGATTGGTGCCTTTTGCATGTTTGCCACCCATT...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | TCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGTTTCTCCAAGATGACTaGTCGTACATAAGGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: SSGEHYPEQHTVKVSSPVFLQDD*SYIRNG Trigger: CCCGTTCCTTATGTACGACCAGTCATCTTGGAGAAA...CACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | AGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACACAAAACACCCGATTTaGGCCATGAGTACAATCACC | + |
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Preference number: 4 (lower is better) Translates to: SGEHYPEQHTVKVSSPVHTKHPI*AMSTIT Trigger: GGTGATTGTACTCATGGCCCAAATCGGGTGTTTTGT...GTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | TTCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTAACGCCAACGGAAGCTaGCATGTCATTGTTACCAAA | + |
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Preference number: 4 (lower is better) Translates to: FQWGALPRTAHSKGELPRNANGS*HVIVTK Trigger: TTTGGTAACAATGACATGTCAGCTTCCGTTGGCGTT...ACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | CACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCACTTTCAGTAACCGGTTaGGATCCTGATAAATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HYPEQHTVKVSSPVHAHPLSVTG*DPDKCL Trigger: AAGACATTTATCAGGATCTCAACCGGTTACTGAAAG...TGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR GCA 90 bp | CACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCAACTTCAACACAAGCATaGCTGGAGGCTTTCAATATA | + |
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Preference number: 4 (lower is better) Translates to: HYPEQHTVKVSSPVHAHPTSTQA*LEAFNI Trigger: TATATTGAAAGCCTCCAGGCATGCTTGTGTTGAAGT...TGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGACTTCAACTCGATACTaGCGAACCAGAAGAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: TLPDAARPGSSGEHYPEQTSTRY*RTRRRS Trigger: AGATCTTCTTCTGGTTCGCCAGTATCGAGTTGAAGT...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | AAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACTCTTCAACAGAACCCTaGAAAAGGTTGAGGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: KHFRMLLGQVPVGSTTQNSSTEP*KRLRAL Trigger: TAGAGCCCTCAACCTTTTCCAGGGTTCTGTTGAAGA...GTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | TTCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTCTGACGAATGTATGTTaGTTTACCTCCCATATTGGG | + |
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Preference number: 4 (lower is better) Translates to: FQWGALPRTAHSKGELPRLTNVC*FTSHIG Trigger: CCCAATATGGGAGGTAAATCAACATACATTCGTCAG...ACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | AAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTACCCGATTTGGGCCATaGGTACAATCACCCCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KIQHSAHSCPSPFKQHPATRFGP*VQSPRS Trigger: AGACCGGGGTGATTGTACTCATGGCCCAAATCGGGT...AGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | ACTAAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAAAGCAGTAAGTTCATaGAAATGGGTGGCAAACATG | + |
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Preference number: 4 (lower is better) Translates to: TKHFRMLLGQVPVGSTTQKAVSS*KWVANM Trigger: CATGTTTGCCACCCATTTTCATGAACTTACTGCTTT...CTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | TCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGTTAACAGTTGGTATTTaGTTGGCCAAAGCAGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: SSGEHYPEQHTVKVSSPVLTVGI*LAKAVS Trigger: ACTTACTGCTTTGGCCAACCAAATACCAACTGTTAA...CACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | AAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTTTCGCTGCTTGTCTCTaGAATTTCTTGGCAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: KIQHSAHSCPSPFKQHPAFAACL*NFLASR Trigger: CCGGCTTGCCAAGAAATTCCAGAGACAAGCAGCGAA...AGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CCA 90 bp | TTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGCACAAAAGTGCACGTCATTTaGAATAAATGCAACTTCATC | + |
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Preference number: 4 (lower is better) Translates to: FRMLLGQVPVGSTTQNSTKVHVI*NKCNFI Trigger: GATGAAGTTGCATTTATTCCAAATGACGTGCACTTT...TGTGCTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR TCA 90 bp | ATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCCAGCATTTCAGCCATaGATGTGGAGACGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKFSIVLTVARPHLNSTQPAFQP*MWRRLS Trigger: TGAAAGGCGTCTCCACATTCATGGCTGAAATGCTGG...CTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CCA 90 bp | ATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGAAGCCTAGCTTCCTCTaGGTGGAATCCACATACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKFSIVLTVARPHLNSTQKPSFL*VESTYP Trigger: TGGGTATGTGGATTCCACCCAGAGGAAGCTAGGCTT...CTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CCA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTAGAAGAGCCTCGAGATTaGAGAACTGATCATTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KFSIVLTVARPHLNSTQLEEPRD*RTDHSR Trigger: CCGAGAATGATCAGTTCTCCAATCTCGAGGCTCTTC...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CCA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTATTAACAATGGCATCCTaGGCCTCTTCATACTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KFSIVLTVARPHLNSTQLLTMAS*ASSYSP Trigger: AGGCGAGTATGAAGAGGCCCAGGATGCCATTGTTAA...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR TCA 90 bp | ATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGTCTCCAGGCCATCCATaGCTTCTCTTAGTTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKFSIVLTVARPHLNSTQSPGHP*LLLVHS Trigger: TGAGTGAACTAAGAGAAGTCATGGATGGCCTGGAGA...CTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CCA 90 bp | TATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCACTAGCTTCCTCTGGGTaGAATCCACATACCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: YKIQHSAHSCPSPFKQHPLASSG*NPHTQL Trigger: GAGTTGGGTATGTGGATTCCACCCAGAGGAAGCTAG...TGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CCA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTATCCAACTTCATGTACTaGCTGAAGTCAAAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KFSIVLTVARPHLNSTQLSNFMY*LKSKVA Trigger: GGCCACTTTTGACTTCAGCCAGTACATGAAGTTGGA...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR TCA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTATGGCTCTACGTAGCCTaGGGAAATATTGACAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFSIVLTVARPHLNSTQLWLYVA*GNIDNF Trigger: GAAATTGTCAATATTTCCTCAGGCTACGTAGAGCCA...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR GCA 90 bp | AAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTTTTATTAAGGTGGACTaGATCTTCTTCTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KIQHSAHSCPSPFKQHPAFIKVD*IFFSRP Trigger: TGGCCTGGAGAAGAAGATGCAGTCCACCTTAATAAA...AGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR TCA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTAAATGCAACTTCATCTTaGACTTCAACACAAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KFSIVLTVARPHLNSTQLNATSS*TSTQAC Trigger: GCATGCTTGTGTTGAAGTTCAAGATGAAGTTGCATT...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR TCA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTAGAGGTTCCAATGTTCTaGAATTCTTCAAGCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFSIVLTVARPHLNSTQLEVPMF*NSSSSR Trigger: TCTAGAGCTTGAAGAATTTCAGAACATTGGAACCTC...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CCA 90 bp | TATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGGCTGCTTGATCCACTaGTTAACCAATCTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKIQHSAHSCPSPFKQHPGCLIH*LTNLCP Trigger: AGGACAAAGATTGGTTAACCAGTGGATCAAGCAGCC...TGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR GCA 90 bp | ATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGGTCCTTGAGCAGTTTTaGATTTATTCAATAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IKFSIVLTVARPHLNSTQVLEQF*IYSIMR Trigger: CCGCATTATTGAATAAATGCAAAACTGCTCAAGGAC...CTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR GCA 90 bp | ACAATGGCATCCTGGGCCTCTTCATACTCGCCTTTGTTCTTAGTATATTCTTCATTTATTAAGGTGGACTaGATCTTCTTCTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMASWASSYSPLFLVYSSFIKVD*IFFSRP Trigger: TGGCCTGGAGAAGAAGATGCAGTCCACCTTAATAAA...TGAAGAATATACTAAGAACAAAGGCGAGTATGAAGAGGCCCAGGATGCCATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174703.2 |
||
| CDS-3UTR GCA 90 bp | TATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCACTTTCTCTTCCTTaGAGGTTACACGGAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKIQHSAHSCPSPFKQHPALSLP*RLHGNN Trigger: ATTATTTCCGTGTAACCTGCAAGGAAGAGAAAGTGC...TGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR TCA 90 bp | AACTTCATCTTGAACTTCAACACAAGCATGCCTGGAGGCTTTCAATATAATTCTTCTCCAGGCCATCCATaGCTTCTCTTAGTTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFILNFNTSMPGGFQYNSSPGHP*LLLVHS Trigger: TGAGTGAACTAAGAGAAGTCATGGATGGCCTGGAGA...AGAATTATATTGAAAGCCTCCAGGCATGCTTGTGTTGAAGTTCAAGATGAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174703.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTAACAATGGCATCCTGGGCCTCTTCATACTCGCCTTTGTTCTTAGTATATCGTGGTTTTCCACCTaGTCCATATCTAAAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFNNGILGLFILAFVLSISWFST*SISKVV Trigger: AACAACTTTAGATATGGATCAGGTGGAAAACCACGA...TATACTAAGAACAAAGGCGAGTATGAAGAGGCCCAGGATGCCATTGTTAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174703.2 |
||
| CDS GCA 90 bp | CGCCGCGGTCGAAGAGGCGCACCGTGGTGCTCGGCTTCTCCGGCATaGCCTCAAAGAAGCGCACGAAGCCCGCCTCGGCCGCGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRGRRGAPWCSASPA*PQRSARSPPRPRLP Trigger: TGGAAGGCGCGGCCGAGGCGGGCTTCGTGCGCTTCTTTGAGGGCATGCCGGAGAAGCCGAGCACCACGGTGCGCCTCTTCGACCGCGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS GCA 90 bp | CGTGCGCCGTGTAAAAGTCGCCGCGGTCGAAGAGGCGCACCGTGGTaGTCGGCTTCTCCGGCATGCCCTCAAAGAAGCGCACGAAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAPCKSRRGRRGAPW*SASPACPQRSARSP Trigger: CGGGCTTCGTGCGCTTCTTTGAGGGCATGCCGGAGAAGCCGAGCACCACGGTGCGCCTCTTCGACCGCGGCGACTTTTACACGGCGCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CCA 90 bp | TGCAGGGTCTTACTCCCTGCCGGCCCCATGTACTTGATCACGCCCTaGGTCTTGAACACCTCGCGGGCCGCCAGCAGCGCGTCCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CRVLLPAGPMYLITP*VLNTSRAASSASSP Trigger: CGGAGAGGACGCGCTGCTGGCGGCCCGCGAGGTGTTCAAGACCCAGGGCGTGATCAAGTACATGGGGCCGGCAGGGAGTAAGACCCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CCA 90 bp | CTCCGTGCGCCGTGTAAAAGTCGCCGCGGTCGAAGAGGCGCACCGTaGTGCTCGGCTTCTCCGGCATGCCCTCAAAGAAGCGCACGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRAPCKSRRGRRGAP*CSASPACPQRSARS Trigger: GCTTCGTGCGCTTCTTTGAGGGCATGCCGGAGAAGCCGAGCACCACGGTGCGCCTCTTCGACCGCGGCGACTTTTACACGGCGCACGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCGCCGGCCCCATGTACTaGATCACGCCCTGGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEHYPEQHTVKVSSPVHAAGPMY*ITPWVL Trigger: CAAGACCCAGGGCGTGATCAAGTACATGGGGCCGGC...GGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS-3UTR CAA 90 bp | CCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCACTGTCGTAAAGGGCACCTGCTaGACCTTCGACAGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRTAHSKGELPRARPPTVVKGTC*TFDRNS Trigger: GGAGTTCCTGTCGAAGGTCAAGCAGGTGCCCTTTAC...GACAGTGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | TTCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTCACCTCGGCTTTCAGTaGCTTCAGCTTCGCGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FQWGALPRTAHSKGELPRHLGFQ*LQLRGD Trigger: ATCTCCGCGAAGCTGAAGCAACTGAAAGCCGAGGTG...ACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS GCA 90 bp | ACCAGCCCCGACTCGAGCAAGGATGCAATCCACAATGGACACTTCTaGCGACTCACAGGGCACAAAACACCCGATTTGGGCCATGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TSPDSSKDAIHNGHF*RLTGHKTPDLGHEY Trigger: GTACTCATGGCCCAAATCGGGTGTTTTGTGCCCTGTGAGTCGGCAGAAGTGTCCATTGTGGATTGCATCCTTGCTCGAGTCGGGGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS CCA 90 bp | GTTGACTGTCACCAGCCCCGACTCGAGCAAGGATGCAATCCACAATaGACACTTCTGCCGACTCACAGGGCACAAAACACCCGATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VDCHQPRLEQGCNPQ*TLLPTHRAQNTRFG Trigger: CCCAAATCGGGTGTTTTGTGCCCTGTGAGTCGGCAGAAGTGTCCATTGTGGATTGCATCCTTGCTCGAGTCGGGGCTGGTGACAGTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS GCA 90 bp | AGACGCCTTTCAGTTGACTGTCACCAGCCCCGACTCGAGCAAGGATaGAATCCACAATGGACACTTCTGCCGACTCACAGGGCACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRLSVDCHQPRLEQG*NPQWTLLPTHRAQN Trigger: GTTTTGTGCCCTGTGAGTCGGCAGAAGTGTCCATTGTGGATTGCATCCTTGCTCGAGTCGGGGCTGGTGACAGTCAACTGAAAGGCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS TCA 90 bp | GCAGTCTCCAGCATTTCAGCCATGAATGTGGAGACGCCTTTCAGTTaGCTGTCACCAGCCCCGACTCGAGCAAGGATGCAATCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: AVSSISAMNVETPFS*LSPAPTRARMQSTM Trigger: CATTGTGGATTGCATCCTTGCTCGAGTCGGGGCTGGTGACAGTCAACTGAAAGGCGTCTCCACATTCATGGCTGAAATGCTGGAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS GCA 90 bp | ACCTGCTTGACCTTCGACAGGAACTCCAGAATAATTTTCTCACCTTaGTCTCTTTCCAGGCAGCGTCTCTTTGCAGCCGGCTCGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TCLTFDRNSRIIFSP*SLSRQRLFAAGSAS Trigger: CGAAGCCGAGCCGGCTGCAAAGAGACGCTGCCTGGAAAGAGAGCAAGGTGAGAAAATTATTCTGGAGTTCCTGTCGAAGGTCAAGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS GCA 90 bp | AGCTTCGCGGAGATGCTCTCCTCCGACATGGCAGTAAAGGGCACCTaGTTGACCTTCGACAGGAACTCCAGAATAATTTTCTCACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFAEMLSSDMAVKGT*LTFDRNSRIIFSPC Trigger: GCAAGGTGAGAAAATTATTCTGGAGTTCCTGTCGAAGGTCAAGCAGGTGCCCTTTACTGCCATGTCGGAGGAGAGCATCTCCGCGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGGAAGCTGACATGTCATaGTTACCAAACAGGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLPDAARPGSSGEHYPEQEADMS*LPNRMS Trigger: AGACATCCTGTTTGGTAACAATGACATGTCAGCTTC...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | ACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACAGATCTGTTCTCCTTTTTaGCCTTTCAGTAACCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLPDAARPGSSGEHYPEQICSPF*PFSNRL Trigger: CAACCGGTTACTGAAAGGCAAAAAAGGAGAACAGAT...CTGTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | CCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGCACGCCCACCCACTGTCCAAACTGCCCAAAATTaGAATCGTCTGATAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRTAHSKGELPRARPPTVQTAQN*NRLIRV Trigger: AACTCTTATCAGACGATTCAAATTTTGGGCAGTTTG...GACAGTGGGTGGGCGTGCACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | ACTAAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGTCCAATTTAATCTGTTaGCCAGGATCCAATCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKHFRMLLGQVPVGSTTQSNLIC*PGSNPS Trigger: GCTCGGATTGGATCCTGGCAAACAGATTAAATTGGA...CTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | TTCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGTGCTGAAGTTCTTGTaGTTGCGAAGCACTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQWGALPRTAHSKGELPRVLKFL*LRSTFS Trigger: AGAGAAAGTGCTTCGCAACAACAAGAACTTCAGCAC...ACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | AAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACGAGGACAATTCACTGTaGGTAAACTTCACGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KHFRMLLGQVPVGSTTQNEDNSL*VNFTPF Trigger: GAATGGCGTGAAGTTTACCAACAGTGAATTGTCCTC...GTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | ATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGGGAGACGCCTTTCAGTaGACTGTCACCAGCCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: IKFSIVLTVARPHLNSTQGDAFQ*TVTSPD Trigger: GTCGGGGCTGGTGACAGTCAACTGAAAGGCGTCTCC...CTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | AAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACACAGTTGGTATTTGGTaGGCCAAAGCAGTAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KHFRMLLGQVPVGSTTQNTVGIW*AKAVSS Trigger: TGAACTTACTGCTTTGGCCAACCAAATACCAACTGT...GTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGGGGAGCACTACCCAGAACAGCACACAGTAAAGGTGAGCTCCCCCGTGATTAACAGTTGGTATTaGGTTGGCCAAAGCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGEHYPEQHTVKVSSPVINSWY*VGQSSK Trigger: CTTACTGCTTTGGCCAACCAAATACCAACTGTTAAT...CACGGGGGAGCTCACCTTTACTGTGTGCTGTTCTGGGTAGTGCTCCCCACTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 90 bp | ACACTTCTGCCGACTCACAGGGCACAAAACACCCGATTTGGGCCATaGGTACAATCACCCCGGTCTGACGAATGTATGTTGATTTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLPTHRAQNTRFGP*VQSPRSDECMLIYL Trigger: GAGGTAAATCAACATACATTCGTCAGACCGGGGTGATTGTACTCATGGCCCAAATCGGGTGTTTTGTGCCCTGTGAGTCGGCAGAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 90 bp | GGTGTCTTCAACAGAACCCTGGAAAAGGTTGAGGGCTCTAACTGCTaGCATGTCCAACTTCATGTACTGGCTGAAGTCAAAAGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVFNRTLEKVEGSNC*HVQLHVLAEVKSGQ Trigger: CTGGCCACTTTTGACTTCAGCCAGTACATGAAGTTGGACATGGCAGCAGTTAGAGCCCTCAACCTTTTCCAGGGTTCTGTTGAAGACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 90 bp | AGAGGACAATTCACGAGCCCCCGGGCTGCATTTATTAAGGTGGACTaGATCTTCTTCTCCAGGCCATCCATGACTTCTCTTAGTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RGQFTSPRAAFIKVD*IFFSRPSMTSLSSL Trigger: GAGTGAACTAAGAGAAGTCATGGATGGCCTGGAGAAGAAGATGCAGTCCACCTTAATAAATGCAGCCCGGGGGCTCGTGAATTGTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174703.2 |
||
| CDS CCA 90 bp | CGAAGATCAATAAGAGGAGTCACAAAAACTGCCAACAACAGTGCCTaGTGTCTTCCTTCGTATTTCTCCAGAGCCTGGATGACGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSIRGVTKTANNSA*CLPSYFSRAWMTLG Trigger: CCCCAGCGTCATCCAGGCTCTGGAGAAATACGAAGGAAGACACCAGGCACTGTTGTTGGCAGTTTTTGTGACTCCTCTTATTGATCTTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | AAACACTTCCGGATGCTGCTAGGCCAGGTTCCAGTGGGGAGCACTACCCAGAACGTAAAACGCATTCCTTaGGTCCAATCTGAATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KHFRMLLGQVPVGSTTQNVKRIP*VQSESE Trigger: TTCTGATTCAGATTGGACCAAAGGAATGCGTTTTAC...GTTCTGGGTAGTGCTCCCCACTGGAACCTGGCCTAGCAGCATCCGGAAGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CCA 90 bp | ACTGATCATTCTCGGGGAACTCACACAAGCCTAGCTTCCTCTGGGTaGAATCCACATACCCAACTCCAACATGTCTTTGACCATCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TDHSRGTHTSLASSG*NPHTQLQHVFDHQP Trigger: TGGTTGATGGTCAAAGACATGTTGGAGTTGGGTATGTGGATTCCACCCAGAGGAAGCTAGGCTTGTGTGAGTTCCCCGAGAATGATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | AAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTTCCATGAGCGGCTGCTaGATCCACTGGTTAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KIQHSAHSCPSPFKQHPASMSGC*IHWLTN Trigger: ATTGGTTAACCAGTGGATCAAGCAGCCGCTCATGGA...AGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 90 bp | AGCTTCCTCTGGGTGGAATCCACATACCCAACTCCAACATGTCTTTaGCCATCAACCACGGCCATTTTAATACCCATAACGCCAACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFLWVESTYPTPTCL*PSTTAILIPITPTE Trigger: TTCCGTTGGCGTTATGGGTATTAAAATGGCCGTGGTTGATGGTCAAAGACATGTTGGAGTTGGGTATGTGGATTCCACCCAGAGGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 90 bp | GGCACAAAACACCCGATTTGGGCCATGAGTACAATCACCCCGGTCTaGCGAATGTATGTTGATTTACCTCCCATATTGGGACCAGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: GTKHPIWAMSTITPV*RMYVDLPPILGPVM Trigger: CATTACTGGTCCCAATATGGGAGGTAAATCAACATACATTCGTCAGACCGGGGTGATTGTACTCATGGCCCAAATCGGGTGTTTTGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CCA 90 bp | AAACGCATTCCTTTGGTCCAATCTGAATCAGAAGAGCCTCGAGATTaGAGAACTGATCATTCTCGGGGAACTCACACAAGCCTAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRIPLVQSESEEPRD*RTDHSRGTHTSLAS Trigger: GGAAGCTAGGCTTGTGTGAGTTCCCCGAGAATGATCAGTTCTCCAATCTCGAGGCTCTTCTGATTCAGATTGGACCAAAGGAATGCGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 90 bp | AGAACGAAGATCAATAAGAGGAGTCACAAAAACTGCCAACAACAGTaGCTGGTGTCTTCCTTCGTATTTCTCCAGAGCCTGGATGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTKINKRSHKNCQQQ*LVSSFVFLQSLDDA Trigger: AGCGTCATCCAGGCTCTGGAGAAATACGAAGGAAGACACCAGGCACTGTTGTTGGCAGTTTTTGTGACTCCTCTTATTGATCTTCGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | AAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTAGACTCAAAGTTCATCTaGCTAAGCACAACACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KFSIVLTVARPHLNSTQLDSKFI*LSTTLC Trigger: GCAGAGTGTTGTGCTTAGCAAGATGAACTTTGAGTC...TAGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | ATAAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCACAAAACACCCGATTaGGGCCATGAGTACAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: IKFSIVLTVARPHLNSTQHKTPD*GHEYNH Trigger: GTGATTGTACTCATGGCCCAAATCGGGTGTTTTGTG...CTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 90 bp | GATTTGGGCCATGAGTACAATCACCCCGGTCTGACGAATGTATGTTaGTTTACCTCCCATATTGGGACCAGTAATGATGTGGAACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLGHEYNHPGLTNVC*FTSHIGTSNDVEHL Trigger: CAGATGTTCCACATCATTACTGGTCCCAATATGGGAGGTAAATCAACATACATTCGTCAGACCGGGGTGATTGTACTCATGGCCCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 90 bp | CGGTTAAGGTCTGGAAACCGGCGAAGCAAATCCTCCTGTAAACTCTaGCTCAGTTCTGAATCCTCGACAAAAGCTTCCACTAAATTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RLRSGNRRSKSSCKL*LSSESSTKASTKFN Trigger: GTTAAATTTAGTGGAAGCTTTTGTCGAGGATTCAGAACTGAGGCAGAGTTTACAGGAGGATTTGCTTCGCCGGTTTCCAGACCTTAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS-3UTR CAA 90 bp | AAAATTCAGCATAGTGCTCACAGTTGCCCGTCCCCATTTAAACAGCACCCAGCTTCTGACGAATGTATGTaGATTTACCTCCCATATTGG | + |
|
Preference number: 5 (lower is better) Translates to: KIQHSAHSCPSPFKQHPASDECM*IYLPYW Trigger: CCAATATGGGAGGTAAATCAACATACATTCGTCAGA...AGCTGGGTGCTGTTTAAATGGGGACGGGCAACTGTGAGCACTATGCTGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 90 bp | ACCATCAACCACGGCCATTTTAATACCCATAACGCCAACGGAAGCTaGCATGTCATTGTTACCAAACAGGATGTCTTCAAACTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TINHGHFNTHNANGS*HVIVTKQDVFKLRK Trigger: CTTTCTCAGTTTGAAGACATCCTGTTTGGTAACAATGACATGTCAGCTTCCGTTGGCGTTATGGGTATTAAAATGGCCGTGGTTGATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 90 bp | AGTTCTAAAAACTTGATTACTGCAGATAGTGATGAAACTGCAACCTaGTTCTCCATCTCTGGTAGGGCAGCACTATTTATCTGTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSKNLITADSDETAT*FSISGRAALFICSP Trigger: AGGAGAACAGATAAATAGTGCTGCCCTACCAGAGATGGAGAATCAGGTTGCAGTTTCATCACTATCTGCAGTAATCAAGTTTTTAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS TCA 90 bp | AGATTATTAACAGTTGGTATTTGGTTGGCCAAAGCAGTAAGTTCATaGAAATGGGTGGCAAACATGCAAAAGGCACCAATCTTCGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLTVGIWLAKAVSS*KWVANMQKAPIFVA Trigger: TGCAACGAAGATTGGTGCCTTTTGCATGTTTGCCACCCATTTTCATGAACTTACTGCTTTGGCCAACCAAATACCAACTGTTAATAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 90 bp | CAAACTGCCCAAAATTTGAATCGTCTGATAAGAGTTCTAAAAACTTaGTTACTGCAGATAGTGATGAAACTGCAACCTGATTCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QTAQNLNRLIRVLKT*LLQIVMKLQPDSPS Trigger: AGATGGAGAATCAGGTTGCAGTTTCATCACTATCTGCAGTAATCAAGTTTTTAGAACTCTTATCAGACGATTCAAATTTTGGGCAGTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CCA 90 bp | AATGATGTGGAACATCTGTTTATCTTTTTCAAAGTGCACGTCATTTaGAATAAATGCAACTTCATCTTGAACTTCAACACAAGCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NDVEHLFIFFKVHVI*NKCNFILNFNTSMP Trigger: AGGCATGCTTGTGTTGAAGTTCAAGATGAAGTTGCATTTATTCCAAATGACGTGCACTTTGAAAAAGATAAACAGATGTTCCACATCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 72 bp | CGAAGAGGCGCACCGTGGTGCTCGGCTTCTCCGGCATaGCCTCAAAGAAGCGCACGAAGCCCGCCTCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RRGAPWCSASPA*PQRSARSPPRP Trigger: CGGCCGAGGCGGGCTTCGTGCGCTTCTTTGAGGGCATGCCGGAGAAGCCGAGCACCACGGTGCGCCTCTTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CAA 90 bp | GTCTTACTCCCTGCCGGCCCCATGTACTTGATCACGCCCTGGGTCTaGAACACCTCGCGGGCCGCCAGCAGCGCGTCCTCTCCGTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLLPAGPMYLITPWV*NTSRAASSASSPCA Trigger: GGCGCACGGAGAGGACGCGCTGCTGGCGGCCCGCGAGGTGTTCAAGACCCAGGGCGTGATCAAGTACATGGGGCCGGCAGGGAGTAAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CAA 72 bp | CCTGCCGGCCCCATGTACTTGATCACGCCCTGGGTCTaGAACACCTCGCGGGCCGCCAGCAGCGCGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAGPMYLITPWV*NTSRAASSASS Trigger: AGAGGACGCGCTGCTGGCGGCCCGCGAGGTGTTCAAGACCCAGGGCGTGATCAAGTACATGGGGCCGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CCA 72 bp | TTACTCCCTGCCGGCCCCATGTACTTGATCACGCCCTaGGTCTTGAACACCTCGCGGGCCGCCAGCAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLPAGPMYLITP*VLNTSRAASSA Trigger: CGCGCTGCTGGCGGCCCGCGAGGTGTTCAAGACCCAGGGCGTGATCAAGTACATGGGGCCGGCAGGGAGTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CCA 72 bp | CCGTGTAAAAGTCGCCGCGGTCGAAGAGGCGCACCGTaGTGCTCGGCTTCTCCGGCATGCCCTCAAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PCKSRRGRRGAP*CSASPACPQRS Trigger: GCTTCTTTGAGGGCATGCCGGAGAAGCCGAGCACCACGGTGCGCCTCTTCGACCGCGGCGACTTTTACACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CAA 72 bp | CTCTGCAGGGTCTTACTCCCTGCCGGCCCCATGTACTaGATCACGCCCTGGGTCTTGAACACCTCGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCRVLLPAGPMY*ITPWVLNTSRA Trigger: GGCCCGCGAGGTGTTCAAGACCCAGGGCGTGATCAAGTACATGGGGCCGGCAGGGAGTAAGACCCTGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CAA 90 bp | AGCACAACACTCTGCAGGGTCTTACTCCCTGCCGGCCCCATGTACTaGATCACGCCCTGGGTCTTGAACACCTCGCGGGCCGCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: STTLCRVLLPAGPMY*ITPWVLNTSRAASS Trigger: GCTGCTGGCGGCCCGCGAGGTGTTCAAGACCCAGGGCGTGATCAAGTACATGGGGCCGGCAGGGAGTAAGACCCTGCAGAGTGTTGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS GCA 72 bp | TGTAAAAGTCGCCGCGGTCGAAGAGGCGCACCGTGGTaGTCGGCTTCTCCGGCATGCCCTCAAAGAAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: CKSRRGRRGAPW*SASPACPQRSA Trigger: TGCGCTTCTTTGAGGGCATGCCGGAGAAGCCGAGCACCACGGTGCGCCTCTTCGACCGCGGCGACTTTTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS GCA 72 bp | TTTCTCACCTTGCTCTCTTTCCAGGCAGCGTCTCTTTaGAGCCGGCTCGGCTTCGTCACATCCCAGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FLTLLSFQAASL*SRLGFVTSQRG Trigger: ACCTCGCTGGGATGTGACGAAGCCGAGCCGGCTGCAAAGAGACGCTGCCTGGAAAGAGAGCAAGGTGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CCA 72 bp | CACCAGCCCCGACTCGAGCAAGGATGCAATCCACAATaGACACTTCTGCCGACTCACAGGGCACAAAACACC | + |
|
Preference number: 6 (lower is better) Translates to: HQPRLEQGCNPQ*TLLPTHRAQNT Trigger: GGTGTTTTGTGCCCTGTGAGTCGGCAGAAGTGTCCATTGTGGATTGCATCCTTGCTCGAGTCGGGGCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 72 bp | TCAGTTGACTGTCACCAGCCCCGACTCGAGCAAGGATaGAATCCACAATGGACACTTCTGCCGACTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVDCHQPRLEQG*NPQWTLLPTHR Trigger: CCTGTGAGTCGGCAGAAGTGTCCATTGTGGATTGCATCCTTGCTCGAGTCGGGGCTGGTGACAGTCAACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 72 bp | GACTCGAGCAAGGATGCAATCCACAATGGACACTTCTaGCGACTCACAGGGCACAAAACACCCGATTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DSSKDAIHNGHF*RLTGHKTPDLG Trigger: GCCCAAATCGGGTGTTTTGTGCCCTGTGAGTCGGCAGAAGTGTCCATTGTGGATTGCATCCTTGCTCGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 72 bp | CACTTCTGCCGACTCACAGGGCACAAAACACCCGATTaGGGCCATGAGTACAATCACCCCGGTCTGACGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HFCRLTGHKTPD*GHEYNHPGLTN Trigger: ATTCGTCAGACCGGGGTGATTGTACTCATGGCCCAAATCGGGTGTTTTGTGCCCTGTGAGTCGGCAGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 72 bp | GAAGCTGTTGTTCTTTGCGACCACCTCGGCTTTCAGTaGCTTCAGCTTCGCGGAGATGCTCTCCTCCGACAT | + |
|
Preference number: 6 (lower is better) Translates to: EAVVLCDHLGFQ*LQLRGDALLRH Trigger: ATGTCGGAGGAGAGCATCTCCGCGAAGCTGAAGCAACTGAAAGCCGAGGTGGTCGCAAAGAACAACAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 72 bp | CCGACTCACAGGGCACAAAACACCCGATTTGGGCCATaGGTACAATCACCCCGGTCTGACGAATGTATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PTHRAQNTRFGP*VQSPRSDECML Trigger: CAACATACATTCGTCAGACCGGGGTGATTGTACTCATGGCCCAAATCGGGTGTTTTGTGCCCTGTGAGTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 72 bp | AGCATTTCAGCCATGAATGTGGAGACGCCTTTCAGTTaGCTGTCACCAGCCCCGACTCGAGCAAGGATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SISAMNVETPFS*LSPAPTRARMQ Trigger: TTGCATCCTTGCTCGAGTCGGGGCTGGTGACAGTCAACTGAAAGGCGTCTCCACATTCATGGCTGAAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 90 bp | AGCAGTCTCCAGCATTTCAGCCATGAATGTGGAGACGCCTTTCAGTaGACTGTCACCAGCCCCGACTCGAGCAAGGATGCAATCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSLQHFSHECGDAFQ*TVTSPDSSKDAIHN Trigger: ATTGTGGATTGCATCCTTGCTCGAGTCGGGGCTGGTGACAGTCAACTGAAAGGCGTCTCCACATTCATGGCTGAAATGCTGGAGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS CAA 90 bp | GGAGCCGGAGCCTTTATCCGTGAAATGATCTCGTTTACGAAGCTGTaGTTCTTTGCGACCACCTCGGCTTTCAGTTGCTTCAGCTTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GAGAFIREMISFTKL*FFATTSAFSCFSFA Trigger: CGCGAAGCTGAAGCAACTGAAAGCCGAGGTGGTCGCAAAGAACAACAGCTTCGTAAACGAGATCATTTCACGGATAAAGGCTCCGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 90 bp | TGGCGAACCAGAAGAAGATCTTTCACGAAAGACTCAAAGTTCATCTaGCTAAGCACAACACTCTGCAGGGTCTTACTCCCTGCCGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WRTRRRSFTKDSKFI*LSTTLCRVLLPAGP Trigger: GGGGCCGGCAGGGAGTAAGACCCTGCAGAGTGTTGTGCTTAGCAAGATGAACTTTGAGTCTTTCGTGAAAGATCTTCTTCTGGTTCGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS CAA 90 bp | TTCGCGGAGATGCTCTCCTCCGACATGGCAGTAAAGGGCACCTGCTaGACCTTCGACAGGAACTCCAGAATAATTTTCTCACCTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FAEMLSSDMAVKGTC*TFDRNSRIIFSPCS Trigger: AGAGCAAGGTGAGAAAATTATTCTGGAGTTCCTGTCGAAGGTCAAGCAGGTGCCCTTTACTGCCATGTCGGAGGAGAGCATCTCCGCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 72 bp | ACCTTCGACAGGAACTCCAGAATAATTTTCTCACCTTaGTCTCTTTCCAGGCAGCGTCTCTTTGCAGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TFDRNSRIIFSP*SLSRQRLFAAG Trigger: GCCGGCTGCAAAGAGACGCTGCCTGGAAAGAGAGCAAGGTGAGAAAATTATTCTGGAGTTCCTGTCGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CCA 72 bp | TCTCGGGGAACTCACACAAGCCTAGCTTCCTCTGGGTaGAATCCACATACCCAACTCCAACATGTCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRGTHTSLASSG*NPHTQLQHVFD Trigger: GTCAAAGACATGTTGGAGTTGGGTATGTGGATTCCACCCAGAGGAAGCTAGGCTTGTGTGAGTTCCCCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 72 bp | GAGCCAGTGGTGTCTTCAACAGAACCCTGGAAAAGGTaGAGGGCTCTAACTGCTGCCATGTCCAACTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: EPVVSSTEPWKR*RALTAAMSNFM Trigger: CATGAAGTTGGACATGGCAGCAGTTAGAGCCCTCAACCTTTTCCAGGGTTCTGTTGAAGACACCACTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 72 bp | AAAGACTCAAAGTTCATCTTGCTAAGCACAACACTCTaGAGGGTCTTACTCCCTGCCGGCCCCATGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: KDSKFILLSTTL*RVLLPAGPMYL Trigger: CAAGTACATGGGGCCGGCAGGGAGTAAGACCCTGCAGAGTGTTGTGCTTAGCAAGATGAACTTTGAGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
||
| CDS GCA 72 bp | GAGATGCTCTCCTCCGACATGGCAGTAAAGGGCACCTaGTTGACCTTCGACAGGAACTCCAGAATAATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: EMLSSDMAVKGT*LTFDRNSRIIF Trigger: GAAAATTATTCTGGAGTTCCTGTCGAAGGTCAAGCAGGTGCCCTTTACTGCCATGTCGGAGGAGAGCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CCA 72 bp | TCATTCTCGGGGAACTCACACAAGCCTAGCTTCCTCTaGGTGGAATCCACATACCCAACTCCAACATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFSGNSHKPSFL*VESTYPTPTCL Trigger: AAGACATGTTGGAGTTGGGTATGTGGATTCCACCCAGAGGAAGCTAGGCTTGTGTGAGTTCCCCGAGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CCA 72 bp | AGGGCTCTAACTGCTGCCATGTCCAACTTCATGTACTaGCTGAAGTCAAAAGTGGCCAGTTCAAACTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RALTAAMSNFMY*LKSKVASSNCP Trigger: TGGGCAGTTTGAACTGGCCACTTTTGACTTCAGCCAGTACATGAAGTTGGACATGGCAGCAGTTAGAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 72 bp | CAGTCTTGTAAATTCGCTGCTTGTCTCTGGAATTTCTaGGCAAGCCGGTTAAGGTCTGGAAACCGGCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSCKFAACLWNF*ASRLRSGNRRS Trigger: GCTTCGCCGGTTTCCAGACCTTAACCGGCTTGCCAAGAAATTCCAGAGACAAGCAGCGAATTTACAAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS TCA 72 bp | CACCCGATTTGGGCCATGAGTACAATCACCCCGGTCTaGCGAATGTATGTTGATTTACCTCCCATATTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPIWAMSTITPV*RMYVDLPPILG Trigger: TCCCAATATGGGAGGTAAATCAACATACATTCGTCAGACCGGGGTGATTGTACTCATGGCCCAAATCGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 72 bp | TTCAACAGAACCCTGGAAAAGGTTGAGGGCTCTAACTaGTGCCATGTCCAACTTCATGTACTGGCTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: FNRTLEKVEGSN*CHVQLHVLAEV Trigger: GACTTCAGCCAGTACATGAAGTTGGACATGGCAGCAGTTAGAGCCCTCAACCTTTTCCAGGGTTCTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CCA 72 bp | CCTTTGGTCCAATCTGAATCAGAAGAGCCTCGAGATTaGAGAACTGATCATTCTCGGGGAACTCACACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLVQSESEEPRD*RTDHSRGTHTS Trigger: GCTTGTGTGAGTTCCCCGAGAATGATCAGTTCTCCAATCTCGAGGCTCTTCTGATTCAGATTGGACCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 72 bp | CCTCTTCCCAGCTCATCAATGATTATTAAGGAGTCTTaGGTTGCTGACCTGAGGATGGAAGCAGTCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLPSSSMIIKES*VADLRMEAVSS Trigger: GCTGGAGACTGCTTCCATCCTCAGGTCAGCAACCAAAGACTCCTTAATAATCATTGATGAGCTGGGAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 72 bp | ATGCTCTCCTCCGACATGGCAGTAAAGGGCACCTGCTaGACCTTCGACAGGAACTCCAGAATAATTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: MLSSDMAVKGTC*TFDRNSRIIFS Trigger: TGAGAAAATTATTCTGGAGTTCCTGTCGAAGGTCAAGCAGGTGCCCTTTACTGCCATGTCGGAGGAGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS GCA 72 bp | AACAGAACCCTGGAAAAGGTTGAGGGCTCTAACTGCTaGCATGTCCAACTTCATGTACTGGCTGAAGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: NRTLEKVEGSNC*HVQLHVLAEVK Trigger: TTTGACTTCAGCCAGTACATGAAGTTGGACATGGCAGCAGTTAGAGCCCTCAACCTTTTCCAGGGTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
||
| CDS CAA 72 bp | TTCTTCTGGATGTCCACTGTGCTGAAGTTCTTGTTGTaGCGAAGCACTTTCTCTTCCTTGCAGGTTACACGG | + |
|
Preference number: 6 (lower is better) Translates to: FFWMSTVLKFLL*RSTFSSLQVTR Trigger: CCGTGTAACCTGCAAGGAAGAGAAAGTGCTTCGCAACAACAAGAACTTCAGCACAGTGGACATCCAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS CAA 72 bp | ACGCCATTCTTCTGGATGTCCACTGTGCTGAAGTTCTaGTTGTTGCGAAGCACTTTCTCTTCCTTGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TPFFWMSTVLKF*LLRSTFSSLQV Trigger: AACCTGCAAGGAAGAGAAAGTGCTTCGCAACAACAAGAACTTCAGCACAGTGGACATCCAGAAGAATGGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS CAA 72 bp | GCCTTTATCCGTGAAATGATCTCGTTTACGAAGCTGTaGTTCTTTGCGACCACCTCGGCTTTCAGTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AFIREMISFTKL*FFATTSAFSCF Trigger: GAAGCAACTGAAAGCCGAGGTGGTCGCAAAGAACAACAGCTTCGTAAACGAGATCATTTCACGGATAAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS CAA 90 bp | GTAAACTTCACGCCATTCTTCTGGATGTCCACTGTGCTGAAGTTCTaGTTGTTGCGAAGCACTTTCTCTTCCTTGCAGGTTACACGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VNFTPFFWMSTVLKF*LLRSTFSSLQVTRK Trigger: TTTCCGTGTAACCTGCAAGGAAGAGAAAGTGCTTCGCAACAACAAGAACTTCAGCACAGTGGACATCCAGAAGAATGGCGTGAAGTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS TCA 72 bp | TGGGTGGAATCCACATACCCAACTCCAACATGTCTTTaGCCATCAACCACGGCCATTTTAATACCCATAACG | + |
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Preference number: 6 (lower is better) Translates to: WVESTYPTPTCL*PSTTAILIPIT Trigger: CGTTATGGGTATTAAAATGGCCGTGGTTGATGGTCAAAGACATGTTGGAGTTGGGTATGTGGATTCCACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS TCA 72 bp | GCAGTTTTGCATTTATTCAATAATGCGGCCAGAGACTaGGAGCCAGTGGTGTCTTCAACAGAACCCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AVLHLFNNAARD*EPVVSSTEPWK Trigger: TTTCCAGGGTTCTGTTGAAGACACCACTGGCTCTCAGTCTCTGGCCGCATTATTGAATAAATGCAAAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS CAA 72 bp | CTGGGTGGAATCCACATACCCAACTCCAACATGTCTTaGACCATCAACCACGGCCATTTTAATACCCATAAC | + |
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Preference number: 6 (lower is better) Translates to: LGGIHIPNSNMS*TINHGHFNTHN Trigger: GTTATGGGTATTAAAATGGCCGTGGTTGATGGTCAAAGACATGTTGGAGTTGGGTATGTGGATTCCACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS TCA 72 bp | CATGAGTACAATCACCCCGGTCTGACGAATGTATGTTaGTTTACCTCCCATATTGGGACCAGTAATGATGTG | + |
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Preference number: 6 (lower is better) Translates to: HEYNHPGLTNVC*FTSHIGTSNDV Trigger: CACATCATTACTGGTCCCAATATGGGAGGTAAATCAACATACATTCGTCAGACCGGGGTGATTGTACTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS TCA 72 bp | GACATGTCATTGTTACCAAACAGGATGTCTTCAAACTaGGAAAGATTGCCGGGAGAAGCCTTAAATGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: DMSLLPNRMSSN*ERLPGEALNAR Trigger: TCTGGCATTTAAGGCTTCTCCCGGCAATCTTTCTCAGTTTGAAGACATCCTGTTTGGTAACAATGACATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS TCA 72 bp | CACGGCCATTTTAATACCCATAACGCCAACGGAAGCTaGCATGTCATTGTTACCAAACAGGATGTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HGHFNTHNANGS*HVIVTKQDVFK Trigger: TTTGAAGACATCCTGTTTGGTAACAATGACATGTCAGCTTCCGTTGGCGTTATGGGTATTAAAATGGCCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS TCA 72 bp | ACAGTTGGTATTTGGTTGGCCAAAGCAGTAAGTTCATaGAAATGGGTGGCAAACATGCAAAAGGCACCAATC | + |
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Preference number: 6 (lower is better) Translates to: TVGIWLAKAVSS*KWVANMQKAPI Trigger: GATTGGTGCCTTTTGCATGTTTGCCACCCATTTTCATGAACTTACTGCTTTGGCCAACCAAATACCAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS GCA 72 bp | TGTGATCAGAATCCCTCCTCTCTGGATAACCTTAAATaGCAGATACCACTCATTCTCCTTAGACGCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: CDQNPSSLDNLK*QIPLILLRRLI Trigger: AATAAGGCGTCTAAGGAGAATGAGTGGTATCTGGCATTTAAGGTTATCCAGAGAGGAGGGATTCTGATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172855.2 |
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| CDS CAA 72 bp | AGAAGAAGATCTTTCACGAAAGACTCAAAGTTCATCTaGCTAAGCACAACACTCTGCAGGGTCTTACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RRRSFTKDSKFI*LSTTLCRVLLP Trigger: AGGGAGTAAGACCCTGCAGAGTGTTGTGCTTAGCAAGATGAACTTTGAGTCTTTCGTGAAAGATCTTCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
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| CDS GCA 72 bp | ATCAGAACGAAGATCAATAAGAGGAGTCACAAAAACTaGCAACAACAGTGCCTGGTGTCTTCCTTCGTATTT | + |
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Preference number: 6 (lower is better) Translates to: IRTKINKRSHKN*QQQCLVSSFVF Trigger: AAATACGAAGGAAGACACCAGGCACTGTTGTTGGCAGTTTTTGTGACTCCTCTTATTGATCTTCGTTCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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| CDS GCA 72 bp | ATGTACTGGCTGAAGTCAAAAGTGGCCAGTTCAAACTaGCCAAAATTTGAATCGTCTGATAAGAGTTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: MYWLKSKVASSN*PKFESSDKSSK Trigger: TTTAGAACTCTTATCAGACGATTCAAATTTTGGGCAGTTTGAACTGGCCACTTTTGACTTCAGCCAGTACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024967.14 ENSMUST00000172855.2 |
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| CDS CAA 72 bp | TTAACAATGGCATCCTGGGCCTCTTCATACTCGCCTTaGTTCTTAGTATATTCTTCATTTAAAGAGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: LTMASWASSYSP*FLVYSSFKEDN Trigger: ATTGTCCTCTTTAAATGAAGAATATACTAAGAACAAAGGCGAGTATGAAGAGGCCCAGGATGCCATTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024967.14 |
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