Pregenerated sensors for MSANTD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061469Ensembl transcript IDs: ENSMUST00000074198.2, ENSMUST00000126189.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCGTTTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATaGCTAAGTCCACAATACTGCATGATCCTGAGGTTTACAGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: LRLIPHFLLLGGRER*LSPQYCMILRFTGN Trigger: ATTCCCTGTAAACCTCAGGATCATGCAGTATTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAAACGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| 3UTR GCA 72 bp | ATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATaGCTAAGTCCACAATACTGCATGATCCTGAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: IPHFLLLGGRER*LSPQYCMILRF Trigger: AAACCTCAGGATCATGCAGTATTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR GCA 90 bp | ACAATACTGCATGATCCTGAGGTTTACAGGGAATACATAGGGAATCCCCACTTCCAGGTTGACCATGGCTaGTGGAGGTTGGCGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TILHDPEVYREYIGNPHFQVDHG*WRLASP Trigger: AGGAGACGCCAACCTCCAGCAGCCATGGTCAACCTG...GAAGTGGGGATTCCCTATGTATTCCCTGTAAACCTCAGGATCATGCAGTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | ACAATACTGCATGATCCTGAGGTTTACAGGGAATACATAGGGAATCCCCACTTCATGGCTGCTGGAGGTTaGCGTCTCCTGGGACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TILHDPEVYREYIGNPHFMAAGG*RLLGQS Trigger: GCTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCAT...GAAGTGGGGATTCCCTATGTATTCCCTGTAAACCTCAGGATCATGCAGTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR GCA 90 bp | ACAATACTGCATGATCCTGAGGTTTACAGGGAATACATAGGGAATCCCCACTTCAACGGGGAATCCTCCTaGGACATCATTGGCAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: TILHDPEVYREYIGNPHFNGESS*DIIGSG Trigger: TCCGCTGCCAATGATGTCGCAGGAGGATTCCCCGTT...GAAGTGGGGATTCCCTATGTATTCCCTGTAAACCTCAGGATCATGCAGTATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAAGGCTTCCCTGGGGGCTaGAGCCCAGGATCTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQGFPGG*SPGSCT Trigger: TGTACAAGATCCTGGGCTCCAGCCCCCAGGGAAGCC...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAAAGAGAACCTGGGACATaGCTTCCCTGGGGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQREPGT*LPWGLE Trigger: CTCCAGCCCCCAGGGAAGCCATGTCCCAGGTTCTCT...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAAGTTGACCATGGCTGCTaGAGGTTGGCGTCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQVDHGC*RLASPG Trigger: CCCAGGAGACGCCAACCTCCAGCAGCCATGGTCAAC...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | ACAATACTGCATGATCCTGAGGTTTACAGGGAATACATAGGGAATCCCCACTTCAGGTTCCGCAGTAGGTaGAAACAGCTTTTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TILHDPEVYREYIGNPHFRFRSR*KQLFQL Trigger: GAGCTGGAAAAGCTGTTTCCACCTACTGCGGAACCT...GAAGTGGGGATTCCCTATGTATTCCCTGTAAACCTCAGGATCATGCAGTATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAAATCAGAGAGAGAACCTaGGACATGGCTTCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQIRERT*DMASLG Trigger: CCCCAGGGAAGCCATGTCCCAGGTTCTCTCTCTGAT...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR TCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAACCTGCAGGAAGATCCTaGTTTCAGAGTCGGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQPAGRS*FQSRSM Trigger: CATGGACCGACTCTGAAATCAGGATCTTCCTGCAGG...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR GCA 90 bp | ACAATACTGCATGATCCTGAGGTTTACAGGGAATACATAGGGAATCCCCACTTCACTACTTCCCACTCCTaGAGGAAGATCCTGATTTCA | + |
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Preference number: 4 (lower is better) Translates to: TILHDPEVYREYIGNPHFTTSHS*RKILIS Trigger: TGAAATCAGGATCTTCCTGCAGGAGTGGGAAGTAGT...GAAGTGGGGATTCCCTATGTATTCCCTGTAAACCTCAGGATCATGCAGTATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR TCA 90 bp | CTTCGTTTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCATGAGCTACGGGAATaGCCTGAGGGCTTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRLIPHFLLLGGRERCLSHELRE*PEGFCS Trigger: AGAACAAAAGCCCTCAGGTCATTCCCGTAGCTCATG...ACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAAACGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR GCA 90 bp | GACCTTCGTTTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTACTTGTACAGGGCCTCTaGATAAGGAGAAAACAAGGG | + |
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Preference number: 4 (lower is better) Translates to: DLRLIPHFLLLGGRERCLLVQGL*IRRKQG Trigger: CCCTTGTTTTCTCCTTATGCAGAGGCCCTGTACAAG...TAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAAACGAAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR TCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAAATGCTTCCCAAACTTTaGCCTTGGCTTGCTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQMLPKL*PWLASF Trigger: GAAAGAAGCAAGCCAAGGTCAAAGTTTGGGAAGCAT...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAACAAGGGTTCAATCCCTaGTCTCTCATTACAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQQGFNP*SLITES Trigger: ACTCTCTGTAATGAGAGACCAGGGATTGAACCCTTG...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR GCA 90 bp | CTTCGTTTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTTCTTGTGAATCTTGTTaGTTGTGTGGCTCACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LRLIPHFLLLGGRERCLSSCESC*LCGSLP Trigger: AGGAAGTGAGCCACACAAGCAACAAGATTCACAAGA...ACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAAACGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CCA 90 bp | TTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTCCACAAGCTGACAAAGAAACTTaGTCTTCTTGTGAATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LIPHFLLLGGRERCLSPQADKET*SSCESC Trigger: ACAAGATTCACAAGAAGACCAAGTTTCTTTGTCAGC...TTGTGGACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CCA 90 bp | CCAGGGCTCCCACGTGGGAAACGGGGAATCCTCCTGCGACATCATTaGCAGCGGATTCCCTTGAAGCTGCTCAGAAGGAACCGTGATGCC | + |
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Preference number: 5 (lower is better) Translates to: PGLPRGKRGILLRHH*QRIPLKLLRRNRDA Trigger: GGCATCACGGTTCCTTCTGAGCAGCTTCAAGGGAATCCGCTGCCAATGATGTCGCAGGAGGATTCCCCGTTTCCCACGTGGGAGCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 90 bp | CTGGGACAAAGCCAGGAAGTAGGTGTGGAACTGACAATGGATAGCTaGGATTCCAGGGCTCCCACGTGGGAAACGGGGAATCCTCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: LGQSQEVGVELTMDS*DSRAPTWETGNPPA Trigger: CGCAGGAGGATTCCCCGTTTCCCACGTGGGAGCCCTGGAATCCCAGCTATCCATTGTCAGTTCCACACCTACTTCCTGGCTTTGTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 90 bp | GGGGATCTTGGTGTAAATCACAGGTTGACCATGGCTGCTGGAGGTTaGCGTCTCCTGGGACAAAGCCAGGAAGTAGGTGTGGAACTGACA | + |
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Preference number: 5 (lower is better) Translates to: GDLGVNHRLTMAAGG*RLLGQSQEVGVELT Trigger: TGTCAGTTCCACACCTACTTCCTGGCTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCATGGTCAACCTGTGATTTACACCAAGATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS TCA 90 bp | GGCTCACTTCCTGTTCAACTACTTCCCACTCCTGCAGGAAGATCCTaGTTTCAGAGTCGGTCCATGAGCTACGGGAATGACCTGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GSLPVQLLPTPAGRS*FQSRSMSYGNDLRA Trigger: AGCCCTCAGGTCATTCCCGTAGCTCATGGACCGACTCTGAAATCAGGATCTTCCTGCAGGAGTGGGAAGTAGTTGAACAGGAAGTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CAA 90 bp | TCCACAATACTGCATGATCCTGAGGTTTACAGGGAATACATAGGGAATCCCCACCATGGCTGCTGGAGGTaGGCGTCTCCTGGGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: STILHDPEVYREYIGNPHHGCWR*ASPGTK Trigger: CTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCATG...GTGGGGATTCCCTATGTATTCCCTGTAAACCTCAGGATCATGCAGTATTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CAA 90 bp | TCCACAATACTGCATGATCCTGAGGTTTACAGGGAATACATAGGGAATCCCCACCCTCCTGCGACATCATaGGCAGCGGATTCCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: STILHDPEVYREYIGNPHPPATS*AADSLE Trigger: TTCAAGGGAATCCGCTGCCAATGATGTCGCAGGAGG...GTGGGGATTCCCTATGTATTCCCTGTAAACCTCAGGATCATGCAGTATTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CAA 90 bp | CTTCGTTTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTTGGCAGCGGATTCCCTaGAAGCTGCTCAGAAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: LRLIPHFLLLGGRERCLSWQRIP*KLLRRN Trigger: GTTCCTTCTGAGCAGCTTCAAGGGAATCCGCTGCCA...ACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAAACGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CAA 90 bp | CTTCGTTTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTAAGTGGTGTAAATCACAGGTaGACCATGGCTGCTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LRLIPHFLLLGGRERCLSGVNHR*TMAAGG Trigger: ACCTCCAGCAGCCATGGTCAACCTGTGATTTACACC...ACTTAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAAACGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS-3UTR CAA 90 bp | GACCTTCGTTTGATTCCACATTTTCTTCTCTTAGGAGGTAGAGAAAGATGCCTATGTGAATCTTGTTGCTaGTGTGGCTCACTTCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: DLRLIPHFLLLGGRERCLCESCC*CGSLPV Trigger: AACAGGAAGTGAGCCACACAAGCAACAAGATTCACA...TAGGCATCTTTCTCTACCTCCTAAGAGAAGAAAATGTGGAATCAAACGAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CCA 72 bp | GCTGGTAACTGGGAGGCTGAGGGTACACGGGGGTCGTaGGGTCACCAGCCCCATCAGAGAGAGAACCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: AGNWEAEGTRGS*GHQPHQRENLG Trigger: TCCCAGGTTCTCTCTCTGATGGGGCTGGTGACCCCACGACCCCCGTGTACCCTCAGCCTCCCAGTTACCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 72 bp | GGGTCACCAGCCCCATCAGAGAGAGAACCTGGGACATaGCTTCCCTGGGGGCTGGAGCCCAGGATCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: GSPAPSEREPGT*LPWGLEPRILY Trigger: GTACAAGATCCTGGGCTCCAGCCCCCAGGGAAGCCATGTCCCAGGTTCTCTCTCTGATGGGGCTGGTGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 72 bp | CAGAGAGAGAACCTGGGACATGGCTTCCCTGGGGGCTaGAGCCCAGGATCTTGTACAGGGCCTCTGCATAAG | + |
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Preference number: 6 (lower is better) Translates to: QRENLGHGFPGG*SPGSCTGPLHK Trigger: CTTATGCAGAGGCCCTGTACAAGATCCTGGGCTCCAGCCCCCAGGGAAGCCATGTCCCAGGTTCTCTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 72 bp | CTGACAATGGATAGCTGGGATTCCAGGGCTCCCACGTaGGAAACGGGGAATCCTCCTGCGACATCATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LTMDSWDSRAPT*ETGNPPATSLA Trigger: TGCCAATGATGTCGCAGGAGGATTCCCCGTTTCCCACGTGGGAGCCCTGGAATCCCAGCTATCCATTGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS TCA 72 bp | GCAGCGGATTCCCTTGAAGCTGCTCAGAAGGAACCGTaGTGCCATAATCCGAAGGCTGGTAACTGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AADSLEAAQKEP*CHNPKAGNWEA Trigger: AGCCTCCCAGTTACCAGCCTTCGGATTATGGCATCACGGTTCCTTCTGAGCAGCTTCAAGGGAATCCGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS GCA 72 bp | CTGGGGGCTGGAGCCCAGGATCTTGTACAGGGCCTCTaGATAAGGAGAAAACAAGGGTTCAATCCCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LGAGAQDLVQGL*IRRKQGFNPWS Trigger: AGACCAGGGATTGAACCCTTGTTTTCTCCTTATGCAGAGGCCCTGTACAAGATCCTGGGCTCCAGCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS GCA 72 bp | TGGGGATCTTGGTGTAAATCACAGGTTGACCATGGCTaGTGGAGGTTGGCGTCTCCTGGGACAAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WGSWCKSQVDHG*WRLASPGTKPG Trigger: TCCTGGCTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCATGGTCAACCTGTGATTTACACCAAGATCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CCA 72 bp | GGTGTAAATCACAGGTTGACCATGGCTGCTGGAGGTTaGCGTCTCCTGGGACAAAGCCAGGAAGTAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GVNHRLTMAAGG*RLLGQSQEVGV Trigger: CACACCTACTTCCTGGCTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCATGGTCAACCTGTGATTTACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CAA 90 bp | TGGGGATCTTGGTGTAAATCACAGGTTGACCATGGCTGCTGGAGGTaGGCGTCTCCTGGGACAAAGCCAGGAAGTAGGTGTGGAACTGAC | + |
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Preference number: 6 (lower is better) Translates to: WGSWCKSQVDHGCWR*ASPGTKPGSRCGTD Trigger: GTCAGTTCCACACCTACTTCCTGGCTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCATGGTCAACCTGTGATTTACACCAAGATCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CCA 72 bp | AGAGTCTCGTGCAGATCATGCAGGTTCCGCAGTAGGTaGAAACAGCTTTTCCAGCTCTTCTTCAGGCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: RVSCRSCRFRSR*KQLFQLFFRPR Trigger: TCGGGGCCTGAAGAAGAGCTGGAAAAGCTGTTTCCACCTACTGCGGAACCTGCATGATCTGCACGAGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 72 bp | GGATCTTGGTGTAAATCACAGGTTGACCATGGCTGCTaGAGGTTGGCGTCTCCTGGGACAAAGCCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSWCKSQVDHGC*RLASPGTKPGS Trigger: ACTTCCTGGCTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCATGGTCAACCTGTGATTTACACCAAGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CAA 72 bp | TGGTGTAAATCACAGGTTGACCATGGCTGCTGGAGGTaGGCGTCTCCTGGGACAAAGCCAGGAAGTAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: WCKSQVDHGCWR*ASPGTKPGSRC Trigger: ACACCTACTTCCTGGCTTTGTCCCAGGAGACGCCAACCTCCAGCAGCCATGGTCAACCTGTGATTTACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS TCA 72 bp | ATCCTGATTTCAGAGTCGGTCCATGAGCTACGGGAATaGCCTGAGGGCTTTTGTTCTGCCTCCTCCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: ILISESVHELRE*PEGFCSASSSL Trigger: GAGTGAGGAGGAGGCAGAACAAAAGCCCTCAGGTCATTCCCGTAGCTCATGGACCGACTCTGAAATCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CAA 72 bp | GGAATCCTCCTGCGACATCATTGGCAGCGGATTCCCTaGAAGCTGCTCAGAAGGAACCGTGATGCCATAATC | + |
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Preference number: 6 (lower is better) Translates to: GILLRHHWQRIP*KLLRRNRDAII Trigger: GATTATGGCATCACGGTTCCTTCTGAGCAGCTTCAAGGGAATCCGCTGCCAATGATGTCGCAGGAGGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 72 bp | TCAGGCCCCGATGATAGAGGCGCTGACAAAGAAACTTaGTCTTCTTGTGAATCTTGTTGCTTGTGTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGPDDRGADKET*SSCESCCLCGS Trigger: TGAGCCACACAAGCAACAAGATTCACAAGAAGACCAAGTTTCTTTGTCAGCGCCTCTATCATCGGGGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CCA 72 bp | GGCCTCTGCATAAGGAGAAAACAAGGGTTCAATCCCTaGTCTCTCATTACAGAGAGTCTCGTGCAGATCATG | + |
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Preference number: 6 (lower is better) Translates to: GLCIRRKQGFNP*SLITESLVQIM Trigger: CATGATCTGCACGAGACTCTCTGTAATGAGAGACCAGGGATTGAACCCTTGTTTTCTCCTTATGCAGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074198.2 ENSMUST00000126189.3 |
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| CDS CAA 90 bp | AGAGGCGCTGACAAAGAAACTTGGTCTTCTTGTGAATCTTGTTGCTaGTGTGGCTCACTTCCTGTTCAACTACTTCCCACTCCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RGADKETWSSCESCC*CGSLPVQLLPTPAG Trigger: TCCTGCAGGAGTGGGAAGTAGTTGAACAGGAAGTGAGCCACACAAGCAACAAGATTCACAAGAAGACCAAGTTTCTTTGTCAGCGCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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| CDS CAA 72 bp | GACAAAGAAACTTGGTCTTCTTGTGAATCTTGTTGCTaGTGTGGCTCACTTCCTGTTCAACTACTTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: DKETWSSCESCC*CGSLPVQLLPT Trigger: AGTGGGAAGTAGTTGAACAGGAAGTGAGCCACACAAGCAACAAGATTCACAAGAAGACCAAGTTTCTTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126189.3 |
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