Pregenerated sensors for MSANTD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041124Ensembl transcript IDs: ENSMUST00000047173.10, ENSMUST00000212075.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAAACCACAATCAGGACACTGTGGGCAAATCAGCAGGCGAAGTCTaGCCTTTGCATTTAGAATTCCCAGGTTTAGCCATCCTGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: INHNQDTVGKSAGEV*PLHLEFPGLAILKG Trigger: CCCCTTCAGGATGGCTAAACCTGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTCCTGATTGTGGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 90 bp | CGTGCAACCACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTaGAATAAACCACAATCAGGACACTGTGGGCAAATCAGCAGGCGA | + |
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Preference number: 1 (lower is better) Translates to: RATTCNFVVHEKVHY*NKPQSGHCGQISRR Trigger: TCGCCTGCTGATTTGCCCACAGTGTCCTGATTGTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTGCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 90 bp | GCTCCCAGGTTTCTAAGTCTCAGTCTATTGATAGAAAATACCATTTaGATAACGGACCTACAATCTCCACCACTCCCTATATTCAACATA | + |
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Preference number: 1 (lower is better) Translates to: APRFLSLSLLIENTI*ITDLQSPPLPIFNI Trigger: TATGTTGAATATAGGGAGTGGTGGAGATTGTAGGTCCGTTATTCAAATGGTATTTTCTATCAATAGACTGAGACTTAGAAACCTGGGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 90 bp | CTAACAATAACACAGTTACTACTATCATTTCAACACCACTGTCACTaGTGCAGAGGATATTTCCCCCATCTCTCAGTCTCAAATGACTAT | + |
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Preference number: 1 (lower is better) Translates to: LTITQLLLSFQHHCH*CRGYFPHLSVSNDY Trigger: ATAGTCATTTGAGACTGAGAGATGGGGGAAATATCCTCTGCATCAGTGACAGTGGTGTTGAAATGATAGTAGTAACTGTGTTATTGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR GCA 90 bp | CAGAAAACACAAAGTGAATTCGTGCAACCACTTGCAACTTTGTTGTaGATGAGAAAGTACACTACTGAAATAAACCACAATCAGGACACT | + |
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Preference number: 1 (lower is better) Translates to: QKTQSEFVQPLATLL*MRKYTTEINHNQDT Trigger: AGTGTCCTGATTGTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTGCACGAATTCACTTTGTGTTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR GCA 90 bp | TGCTATTCTGTTTGTGTTGGGCAGAGCATTTATATAGTACACTACTaGAGCACACAGCTACCAATGTATTCCTATCTTTTTCCTACTAAA | + |
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Preference number: 1 (lower is better) Translates to: CYSVCVGQSIYIVHY*STQLPMYSYLFPTK Trigger: TTTAGTAGGAAAAAGATAGGAATACATTGGTAGCTGTGTGCTGCAGTAGTGTACTATATAAATGCTCTGCCCAACACAAACAGAATAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CCA 90 bp | CCAAGTGTACAGTTTTTCAAACTTGGCACTAATGACATCTTGGACTaGGTAATTCTTTCTTGTGAAGACAACTATGCTAAACATGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: PSVQFFKLGTNDILD*VILSCEDNYAKHGE Trigger: TTCACCATGTTTAGCATAGTTGTCTTCACAAGAAAGAATTACCCAGTCCAAGATGTCATTAGTGCCAAGTTTGAAAAACTGTACACTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CCA 90 bp | GTCTCAAATGACTATTCTTCACTTAGAAATCAATCGACAATTCATTaGGTTCCACATCATGGATTTCTGTTACCTTTTTGGCACTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: VSNDYSSLRNQSTIH*VPHHGFLLPFWHWY Trigger: GTACCAGTGCCAAAAAGGTAACAGAAATCCATGATGTGGAACCCAATGAATTGTCGATTGATTTCTAAGTGAAGAATAGTCATTTGAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 90 bp | TTCAAAGAAGGGAGAACTAAAGCTTTCCAGTCATGTGTTGATTCTTaGAGGCAACTGCCTTTCAAAATGACACATTTTAAACAATCTCAG | + |
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Preference number: 1 (lower is better) Translates to: FKEGRTKAFQSCVDS*RQLPFKMTHFKQSQ Trigger: CTGAGATTGTTTAAAATGTGTCATTTTGAAAGGCAGTTGCCTTCAAGAATCAACACATGACTGGAAAGCTTTAGTTCTCCCTTCTTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCAGTCCCAAATGTCTTCTaGGAGCCCAAACTCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPVPNVF*EPKLHW Trigger: CCAGTGGAGTTTGGGCTCCCAGAAGACATTTGGGAC...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATCCTCTGCTATTCTGTTTGTGTTGGGCAGAGCATTTATATAGTACACTACAGGACCACCTTTGCATaGACTGAGGGGGAAAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: QILCYSVCVGQSIYIVHYRTTFA*TEGESY Trigger: GTAGCTTTCCCCCTCAGTTCATGCAAAGGTGGTCCT...GTAGTGTACTATATAAATGCTCTGCCCAACACAAACAGAATAGCAGAGGATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR TCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCATACACCCATTTACTTTaGCCACCAAATAACATCCCA | + |
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Preference number: 2 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPYTHLL*PPNNIP Trigger: TGGGATGTTATTTGGTGGTCAAAGTAAATGGGTGTA...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR GCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCATTACTAATGTGGAAGTaGCTATCAGATCCTCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPLLMWK*LSDPLL Trigger: TAGCAGAGGATCTGATAGGCACTTCCACATTAGTAA...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCACCACTGGAGAATCACTaGATAGAAACTTTACTACAG | + |
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Preference number: 2 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPPLENH*IETLLQ Trigger: CTGTAGTAAAGTTTCTATCCAGTGATTCTCCAGTGG...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAATTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATGTCCCAAATGTCTTCTaGGAGCCCAAACTCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: SEFQILESEGTFSQTPVDVPNVF*EPKLHW Trigger: CCAGTGGAGTTTGGGCTCCCAGAAGACATTTGGGAC...ATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAATTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCACTGAATTTCAGATTCTaGAGTCAGAAGGTACCTTTT | + |
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Preference number: 2 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPLNFRF*SQKVPF Trigger: AAAAGGTACCTTCTGACTCCAGAATCTGAAATTCAG...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGCACAGTTAGGCCAAGTGTACAGTTTTTCAAACTTGGCACTAATGACATCTTACTAATGTGGAAGTaGCTATCAGATCCTCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: RCTVRPSVQFFKLGTNDILLMWK*LSDPLL Trigger: TAGCAGAGGATCTGATAGGCACTTCCACATTAGTAA...GATGTCATTAGTGCCAAGTTTGAAAAACTGTACACTTGGCCTAACTGTGCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CAA 90 bp | TGCTCCCAGGTTTCTAAGTCTCAGTCTATTGATAGAAAATACCATTaGAATAACGGACCTACAATCTCCACCACTCCCTATATTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: CSQVSKSQSIDRKYH*NNGPTISTTPYIQH Trigger: ATGTTGAATATAGGGAGTGGTGGAGATTGTAGGTCCGTTATTCAAATGGTATTTTCTATCAATAGACTGAGACTTAGAAACCTGGGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTGAAATAAACCACTTGGGTTCCACATCATaGATTTCTGTTACCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QPLATLLCMRKYTTEINHLGSTS*ISVTFL Trigger: CAAAAAGGTAACAGAAATCCATGATGTGGAACCCAA...GTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CAA 90 bp | ATCGACAATTCATTGGGTTCCACATCATGGATTTCTGTTACCTTTTaGGCACTGGTACCATTTTTACTAGCTTCTATCATTCTCTTACAT | + |
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Preference number: 2 (lower is better) Translates to: IDNSLGSTSWISVTF*ALVPFLLASIILLH Trigger: ATGTAAGAGAATGATAGAAGCTAGTAAAAATGGTACCAGTGCCAAAAAGGTAACAGAAATCCATGATGTGGAACCCAATGAATTGTCGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CAA 90 bp | AGAAAACAGAAAACACAAAGTGAATTCGTGCAACCACTTGCAACTTaGTTGTGCATGAGAAAGTACACTACTGAAATAAACCACAATCAG | + |
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Preference number: 2 (lower is better) Translates to: RKQKTQSEFVQPLAT*LCMRKYTTEINHNQ Trigger: CTGATTGTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTGCACGAATTCACTTTGTGTTTTCTGTTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCAGATCATGTGTTGATTCTTaGAGGCAACTGCCTTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: CYIKYQPFTFCRISLNFRSCVDS*RQLPFK Trigger: TTTGAAAGGCAGTTGCCTTCAAGAATCAACACATGA...TCTGAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCTCATGTGTTGATTCTTaGAGGCAACTGCCTTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: QCYIKYQPFTFCRISLNFSCVDS*RQLPFK Trigger: TTTGAAAGGCAGTTGCCTTCAAGAATCAACACATGA...GAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATTTTAAGCAGTTAAAATGGTTTTaGCCGTTTAAGTATCTAACC | + |
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Preference number: 2 (lower is better) Translates to: FQILESEGTFSQTPVDFKQLKWF*PFKYLT Trigger: GGTTAGATACTTAAACGGCCAAAACCATTTTAACTG...CTTAAAATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTGAAATAAACCACGTCTCACAGTTAAAATaGTTTTGGCCGTTTAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: QPLATLLCMRKYTTEINHVSQLK*FWPFKY Trigger: ATACTTAAACGGCCAAAACCATTTTAACTGTGAGAC...GTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATAATGACATCTTGGACTaGGTAATTCTTTCTTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TQCYIKYQPFTFCRISLNNDILD*VILSCE Trigger: TTCACAAGAAAGAATTACCCAGTCCAAGATGTCATT...ATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTGTGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCTTTCTGTTACCTTTTTaGCACTGGTACCATTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: QCYIKYQPFTFCRISLNFFLLPF*HWYHFY Trigger: GTAAAAATGGTACCAGTGCCAAAAAGGTAACAGAAA...GAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR GCA 72 bp | AATCAGGACACTGTGGGCAAATCAGCAGGCGAAGTCTaGCCTTTGCATTTAGAATTCCCAGGTTTAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: NQDTVGKSAGEV*PLHLEFPGLAI Trigger: GATGGCTAAACCTGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTCCTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CAA 90 bp | AGATGCACAGTTAGGCCAAGTGTACAGTTTTTCAAACTTGGCACTAATGACATCAATCCAGGACCACCTTaGCATGAACTGAGGGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RCTVRPSVQFFKLGTNDINPGPP*HELRGK Trigger: TTTCCCCCTCAGTTCATGCAAAGGTGGTCCTGGATT...GATGTCATTAGTGCCAAGTTTGAAAAACTGTACACTTGGCCTAACTGTGCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CAA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCATACAGTTTTTCAAACTaGGCACTAATGACATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPYSFSN*ALMTSW Trigger: CCAAGATGTCATTAGTGCCAAGTTTGAAAAACTGTA...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATTTTAAGAATCCAGGACCACCTTaGCATGAACTGAGGGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: FQILESEGTFSQTPVDFKNPGPP*HELRGK Trigger: TTTCCCCCTCAGTTCATGCAAAGGTGGTCCTGGATT...CTTAAAATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 72 bp | ACACAGTTACTACTATCATTTCAACACCACTGTCACTaGTGCAGAGGATATTTCCCCCATCTCTCAGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TQLLLSFQHHCH*CRGYFPHLSVS Trigger: TGAGACTGAGAGATGGGGGAAATATCCTCTGCATCAGTGACAGTGGTGTTGAAATGATAGTAGTAACTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR GCA 72 bp | AAGACAGGGCTCTATGCAGTATTACTAATGTGGAAGTaGCTATCAGATCCTCTGCTATTCTGTTTGTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: KTGLYAVLLMWK*LSDPLLFCLCW Trigger: CCAACACAAACAGAATAGCAGAGGATCTGATAGGCACTTCCACATTAGTAATACTGCATAGAGCCCTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CCA 72 bp | AAGTGCCTATCAGATCCTCTGCTATTCTGTTTGTGTTaGGCAGAGCATTTATATAGTACACTACTGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: KCLSDPLLFCLC*AEHLYSTLLQH Trigger: GTGCTGCAGTAGTGTACTATATAAATGCTCTGCCCAACACAAACAGAATAGCAGAGGATCTGATAGGCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATTTTAAGCTTTCCAGTCATGTGTaGATTCTTGAAGGCAACTGC | + |
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Preference number: 3 (lower is better) Translates to: FQILESEGTFSQTPVDFKLSSHV*ILEGNC Trigger: GCAGTTGCCTTCAAGAATCAACACATGACTGGAAAG...CTTAAAATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 72 bp | ACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTaGAATAAACCACAATCAGGACACTGTGGGCAAATC | + |
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Preference number: 3 (lower is better) Translates to: TCNFVVHEKVHY*NKPQSGHCGQI Trigger: GATTTGCCCACAGTGTCCTGATTGTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR GCA 72 bp | GTTTGTGTTGGGCAGAGCATTTATATAGTACACTACTaGAGCACACAGCTACCAATGTATTCCTATCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: VCVGQSIYIVHY*STQLPMYSYLF Trigger: AAAAAGATAGGAATACATTGGTAGCTGTGTGCTGCAGTAGTGTACTATATAAATGCTCTGCCCAACACAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 72 bp | GGGAGAACTAAAGCTTTCCAGTCATGTGTTGATTCTTaGAGGCAACTGCCTTTCAAAATGACACATTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: GRTKAFQSCVDS*RQLPFKMTHFK Trigger: TTTAAAATGTGTCATTTTGAAAGGCAGTTGCCTTCAAGAATCAACACATGACTGGAAAGCTTTAGTTCTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCAGATACAGTTTTTCAAACTaGGCACTAATGACATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: CYIKYQPFTFCRISLNFRYSFSN*ALMTSW Trigger: CCAAGATGTCATTAGTGCCAAGTTTGAAAAACTGTA...TCTGAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR TCA 72 bp | TTTCTAAGTCTCAGTCTATTGATAGAAAATACCATTTaGATAACGGACCTACAATCTCCACCACTCCCTATA | + |
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Preference number: 3 (lower is better) Translates to: FLSLSLLIENTI*ITDLQSPPLPI Trigger: TATAGGGAGTGGTGGAGATTGTAGGTCCGTTATTCAAATGGTATTTTCTATCAATAGACTGAGACTTAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CCA 72 bp | GACTATTCTTCACTTAGAAATCAATCGACAATTCATTaGGTTCCACATCATGGATTTCTGTTACCTTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: DYSSLRNQSTIH*VPHHGFLLPFW Trigger: CCAAAAAGGTAACAGAAATCCATGATGTGGAACCCAATGAATTGTCGATTGATTTCTAAGTGAAGAATAGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CCA 90 bp | GGGGTAGCTAATCCAGGACCACCTTTGCATGAACTGAGGGGGAAAGCTACAATTCCTGTGGCTGCAGCATaGACTTCTCGCCCTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GVANPGPPLHELRGKATIPVAAA*TSRPGP Trigger: TGGGCCAGGGCGAGAAGTCCATGCTGCAGCCACAGG...AATTGTAGCTTTCCCCCTCAGTTCATGCAAAGGTGGTCCTGGATTAGCTACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CCA 90 bp | GGGGTAGCTAATCCAGGACCACCTTTGCATGAACTGAGGGGGAAAGCTACAATTTGCTCCAGGTCCAGGTaGCGCAGGCGCTCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GVANPGPPLHELRGKATICSRSR*RRRSFS Trigger: AGAGAAAGAGCGCCTGCGCCACCTGGACCTGGAGCA...AATTGTAGCTTTCCCCCTCAGTTCATGCAAAGGTGGTCCTGGATTAGCTACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR TCA 90 bp | GGGGTAGCTAATCCAGGACCACCTTTGCATGAACTGAGGGGGAAAGCTACAATTTCCTCTTCCTTTTCATaGGTGCGCGCCAGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GVANPGPPLHELRGKATISSSFS*VRASPG Trigger: ACCTGGACTGGCGCGCACTCATGAAAAGGAAGAGGA...AATTGTAGCTTTCCCCCTCAGTTCATGCAAAGGTGGTCCTGGATTAGCTACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR GCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCATCGGTGCTGACCAGCTaGAGCCTCCACTTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPSVLTS*SLHFSL Trigger: GAGAGAAAAGTGGAGGCTGCAGCTGGTCAGCACCGA...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | CGACAATTCATTGGGTTCCACATCATGGATTTCTGTTACCTTTTTGGCACTGGTCCGGTTTCTCGGTGCTaGCCAGCTGCAGCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RQFIGFHIMDFCYLFGTGPVSRC*PAAAST Trigger: AGTGGAGGCTGCAGCTGGTCAGCACCGAGAAACCGG...ACCAGTGCCAAAAAGGTAACAGAAATCCATGATGTGGAACCCAATGAATTGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCAAGCATTCACACACTGTaGGATCTCCTCCCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPSIHTL*DLLPGH Trigger: ATGGCCTGGGAGGAGATCGCACAGTGTGTGAATGCT...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCACGCTCCTTTTCCACCTaGAGCCTTTCCGCCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPRSFST*SLSASI Trigger: TATTGAGGCGGAAAGGCTGCAGGTGGAAAAGGAGCG...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | CAGATCCTCTGCTATTCTGTTTGTGTTGGGCAGAGCATTTATATAGTACACTACCCGGTTTCTCGGTGCTaGCCAGCTGCAGCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QILCYSVCVGQSIYIVHYPVSRC*PAAAST Trigger: AGTGGAGGCTGCAGCTGGTCAGCACCGAGAAACCGG...GTAGTGTACTATATAAATGCTCTGCCCAACACAAACAGAATAGCAGAGGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCACATCTAGATCAGACGTaGGCAGAGGAAACCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPHLDQT*AEETQN Trigger: GTTCTGGGTTTCCTCTGCCCACGTCTGATCTAGATG...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| 3UTR CAA 72 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTaGCATTTAGAATTCCCAGGTTTAGCCATCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTVGKSAGEVCP*HLEFPGLAILK Trigger: CTTCAGGATGGCTAAACCTGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCACTTCCTCTTCCACTTTaGCCTCTGTTAAGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPLPLPL*PLLRIH Trigger: GTGGATCCTTAACAGAGGTCAAAGTGGAAGAGGAAG...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | CCAAACTCCACTGGAGAATCACTGGATAGAAACTTTACTACAGACATCATTGTACCTGTGGCTGCAGCATaGACTTCTCGCCCTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PNSTGESLDRNFTTDIIVPVAAA*TSRPGP Trigger: TGGGCCAGGGCGAGAAGTCCATGCTGCAGCCACAGG...TACAATGATGTCTGTAGTAAAGTTTCTATCCAGTGATTCTCCAGTGGAGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | CAGATCCTCTGCTATTCTGTTTGTGTTGGGCAGAGCATTTATATAGTACACTACTCGATGTCCTGTGGCTaGAGCATGGACTTCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QILCYSVCVGQSIYIVHYSMSCG*SMDFSP Trigger: GGGCGAGAAGTCCATGCTGCAGCCACAGGACATCGA...GTAGTGTACTATATAAATGCTCTGCCCAACACAAACAGAATAGCAGAGGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAATTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATTCGATGTCCTGTGGCTaGAGCATGGACTTCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SEFQILESEGTFSQTPVDSMSCG*SMDFSP Trigger: GGGCGAGAAGTCCATGCTGCAGCCACAGGACATCGA...ATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAATTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCACATCTATGTCTTCAGTaGGAGAGTCATCTAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPHLCLQ*ESHLDQ Trigger: CTGATCTAGATGACTCTCTCACTGAAGACATAGATG...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGCATGAACTGAGGGGGAAAGCTACAATTCCTCATTGTTTGCTAAGCCCAAAGTTTCAGCTTCTCTaGTTCGATGTCCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLHELRGKATIPHCLLSPKFQLL*FDVLWL Trigger: CAGCCACAGGACATCGAAGCAGAGAAGCTGAAACTT...TGGGCTTAGCAAACAATGAGGAATTGTAGCTTTCCCCCTCAGTTCATGCAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCATGAACTGAGGGGGAAAGCTACAATTCCTCATTGTTTGCTAAGCCCAATAGGTGGGTCTGGATaGTGTGGAATTGAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLHELRGKATIPHCLLSPIGGSG*CGIEGE Trigger: TTCACCCTCAATTCCACACCATCCAGACCCACCTAT...TGGGCTTAGCAAACAATGAGGAATTGTAGCTTTCCCCCTCAGTTCATGCAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAATTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATATGGACTTCTCGCCCTaGCCCAGCTCGTTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEFQILESEGTFSQTPVDMDFSP*PSSFSR Trigger: TCTAGAGAACGAGCTGGGCCAGGGCGAGAAGTCCAT...ATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAATTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACTCCACTGGAGAATCACTGGATAGAAACTTTACTACAGACATCATTGTATCCTCTTCCTTTTCATaGGTGCGCGCCAGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTGESLDRNFTTDIIVSSSFS*VRASPG Trigger: ACCTGGACTGGCGCGCACTCATGAAAAGGAAGAGGA...TACAATGATGTCTGTAGTAAAGTTTCTATCCAGTGATTCTCCAGTGGAGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGCATGAACTGAGGGGGAAAGCTACAATTCCTCATTGTTTGCTAAGCCCAGTTTCTCTATGTTCATaGGCAGATGGGGCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLHELRGKATIPHCLLSPVSLCS*ADGAHH Trigger: ATGATGAGCCCCATCTGCTCATGAACATAGAGAAAC...TGGGCTTAGCAAACAATGAGGAATTGTAGCTTTCCCCCTCAGTTCATGCAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCTCTATGCAGTATTACTAATGTGGAAGTGCCTATCAGATCCTCTGCTAAAATGCCCTTCTTTCTaGATCCGCAGTCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLYAVLLMWKCLSDPLLKCPSF*IRSLSF Trigger: GAAGGAGAGACTGCGGATTCAGAAAGAAGGGCATTT...TAGCAGAGGATCTGATAGGCACTTCCACATTAGTAATACTGCATAGAGCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | CGACAATTCATTGGGTTCCACATCATGGATTTCTGTTACCTTTTTGGCACTGGTCATCTAGATCAGACGTaGGCAGAGGAAACCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQFIGFHIMDFCYLFGTGHLDQT*AEETQN Trigger: GTTCTGGGTTTCCTCTGCCCACGTCTGATCTAGATG...ACCAGTGCCAAAAAGGTAACAGAAATCCATGATGTGGAACCCAATGAATTGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAATTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATGGGGCTCATCATAGGTaGGTCTGGATGGTGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEFQILESEGTFSQTPVDGAHHR*VWMVWN Trigger: ATTCCACACCATCCAGACCCACCTATGATGAGCCCC...ATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAATTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | ACACAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTGCTCCAGGTCCAGGTaGCGCAGGCGCTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQCYIKYQPFTFCRISLNCSRSR*RRRSFS Trigger: AGAGAAAGAGCGCCTGCGCCACCTGGACCTGGAGCA...ATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | CCAAACTCCACTGGAGAATCACTGGATAGAAACTTTACTACAGACATCATTGTAAGCATTCACACACTGTaGGATCTCCTCCCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTGESLDRNFTTDIIVSIHTL*DLLPGH Trigger: ATGGCCTGGGAGGAGATCGCACAGTGTGTGAATGCT...TACAATGATGTCTGTAGTAAAGTTTCTATCCAGTGATTCTCCAGTGGAGTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | TTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATTTTAAGCGCTCTTTCTCTATCTaGAGCCGCTCCTTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FQILESEGTFSQTPVDFKRSFSI*SRSFST Trigger: GGTGGAAAAGGAGCGGCTGCAGATAGAGAAAGAGCG...CTTAAAATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | CCAAACTCCACTGGAGAATCACTGGATAGAAACTTTACTACAGACATCATTGTACGCTCTTTCTCTATCTaGAGCCGCTCCTTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PNSTGESLDRNFTTDIIVRSFSI*SRSFST Trigger: GGTGGAAAAGGAGCGGCTGCAGATAGAGAAAGAGCG...TACAATGATGTCTGTAGTAAAGTTTCTATCCAGTGATTCTCCAGTGGAGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCACAGTTAGGCCAAGTGTACAGTTTTTCAAACTTGGCACTAATGACATCTTTTCTCTCTCGATCTaGAGCCTCTCCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCTVRPSVQFFKLGTNDIFSLSI*SLSFSS Trigger: GCTGGAGAAGGAGAGGCTGCAGATCGAGAGAGAAAA...GATGTCATTAGTGCCAAGTTTGAAAAACTGTACACTTGGCCTAACTGTGCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CCA 90 bp | CAACCACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTGAAATAAACCACGGGGCTCATCATAGGTaGGTCTGGATGGTGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPLATLLCMRKYTTEINHGAHHR*VWMVWN Trigger: ATTCCACACCATCCAGACCCACCTATGATGAGCCCC...GTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | AGATGCACAGTTAGGCCAAGTGTACAGTTTTTCAAACTTGGCACTAATGACATCATCTGGTATGACAGATaGCAGCATCTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCTVRPSVQFFKLGTNDIIWYDR*QHLFLL Trigger: GAGGAGGAAGAGATGCTGTCATCTGTCATACCAGAT...GATGTCATTAGTGCCAAGTTTGAAAAACTGTACACTTGGCCTAACTGTGCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGCATGAACTGAGGGGGAAAGCTACAATTCCTCATTGTTTGCTAAGCCCACTGCCACTCAAAATTTaGATCATTTCGGAAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLHELRGKATIPHCLLSPLPLKI*IISEGN Trigger: ATTGCCTTCCGAAATGATGCAAATTTTGAGTGGCAG...TGGGCTTAGCAAACAATGAGGAATTGTAGCTTTCCCCCTCAGTTCATGCAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTCTATGCAGTATTACTAATGTGGAAGTGCCTATCAGATCCTCTGCTACGCTCCTTTTCTATCTaGAGCTTCTCTGATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TGLYAVLLMWKCLSDPLLRSFSI*SFSDSN Trigger: GTTTGAATCAGAGAAGCTGCAGATAGAAAAGGAGCG...TAGCAGAGGATCTGATAGGCACTTCCACATTAGTAATACTGCATAGAGCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR TCA 90 bp | GCAGTATTACTAATGTGGAAGTGCCTATCAGATCCTCTGCTATTCTGTTTGTGTGTTTCTCTATGTTCATaGGCAGATGGGGCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLLMWKCLSDPLLFCLCVSLCS*ADGAHH Trigger: ATGATGAGCCCCATCTGCTCATGAACATAGAGAAAC...ACACAAACAGAATAGCAGAGGATCTGATAGGCACTTCCACATTAGTAATACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACTCCACTGGAGAATCACTGGATAGAAACTTTACTACAGACATCATTGTAAAATGCCCTTCTTTCTaGATCCGCAGTCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PNSTGESLDRNFTTDIIVKCPSF*IRSLSF Trigger: GAAGGAGAGACTGCGGATTCAGAAAGAAGGGCATTT...TACAATGATGTCTGTAGTAAAGTTTCTATCCAGTGATTCTCCAGTGGAGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | CAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCCGCTCCTTTTCCACCTaGAGCCTTTCCGCCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: QCYIKYQPFTFCRISLNFRSFST*SLSASI Trigger: TATTGAGGCGGAAAGGCTGCAGGTGGAAAAGGAGCG...GAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | CGACAATTCATTGGGTTCCACATCATGGATTTCTGTTACCTTTTTGGCACTGGTCGCTCCTTTTCTATCTaGAGCTTCTCTGATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQFIGFHIMDFCYLFGTGRSFSI*SFSDSN Trigger: GTTTGAATCAGAGAAGCTGCAGATAGAAAAGGAGCG...ACCAGTGCCAAAAAGGTAACAGAAATCCATGATGTGGAACCCAATGAATTGTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCACAGTTAGGCCAAGTGTACAGTTTTTCAAACTTGGCACTAATGACATCCAACGAGCTTCATGTTaGCCTTCATCCTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RCTVRPSVQFFKLGTNDIQRASC*PSSSSF Trigger: AAAGGAAGAGGATGAAGGCCAACATGAAGCTCGTTG...GATGTCATTAGTGCCAAGTTTGAAAAACTGTACACTTGGCCTAACTGTGCATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | CAACCACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTGAAATAAACCACATAGGTGGGTCTGGATaGTGTGGAATTGAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPLATLLCMRKYTTEINHIGGSG*CGIEGE Trigger: TTCACCCTCAATTCCACACCATCCAGACCCACCTAT...GTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| 3UTR CAA 72 bp | ATGTGGAAGTGCCTATCAGATCCTCTGCTATTCTGTTaGTGTTGGGCAGAGCATTTATATAGTACACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: MWKCLSDPLLFC*CWAEHLYSTLL Trigger: CAGTAGTGTACTATATAAATGCTCTGCCCAACACAAACAGAATAGCAGAGGATCTGATAGGCACTTCCACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACTCCACTGGAGAATCACTGGATAGAAACTTTACTACAGACATCATTGTATCCTGGAATCTGGTATaGCAGATGACAGCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTGESLDRNFTTDIIVSWNLV*QMTASL Trigger: AAGAGATGCTGTCATCTGTCATACCAGATTCCAGGA...TACAATGATGTCTGTAGTAAAGTTTCTATCCAGTGATTCTCCAGTGGAGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATTTTAAGTCCTGGAATCTGGTATaGCAGATGACAGCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQILESEGTFSQTPVDFKSWNLV*QMTASL Trigger: AAGAGATGCTGTCATCTGTCATACCAGATTCCAGGA...CTTAAAATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | TGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCAGATTTTCTCTCTCGATCTaGAGCCTCTCCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYIKYQPFTFCRISLNFRFSLSI*SLSFSS Trigger: GCTGGAGAAGGAGAGGCTGCAGATCGAGAGAGAAAA...TCTGAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTCTATGCAGTATTACTAATGTGGAAGTGCCTATCAGATCCTCTGCTATCAAACTTCAAAAATTaGAGCCGATCTTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLYAVLLMWKCLSDPLLSNFKN*SRSFSS Trigger: GCTGGAAAAAGATCGGCTGCAATTTTTGAAGTTTGA...TAGCAGAGGATCTGATAGGCACTTCCACATTAGTAATACTGCATAGAGCCCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR TCA 90 bp | ACACAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATATCTGGTATGACAGATaGCAGCATCTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQCYIKYQPFTFCRISLNIWYDR*QHLFLL Trigger: GAGGAGGAAGAGATGCTGTCATCTGTCATACCAGAT...ATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTATTACTAATGTGGAAGTGCCTATCAGATCCTCTGCTATTCTGTTTGTGTCTGCCACTCAAAATTTaGATCATTTCGGAAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLLMWKCLSDPLLFCLCLPLKI*IISEGN Trigger: ATTGCCTTCCGAAATGATGCAAATTTTGAGTGGCAG...ACACAAACAGAATAGCAGAGGATCTGATAGGCACTTCCACATTAGTAATACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR GCA 90 bp | CAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCAAGTTTCAGCTTCTCTaGTTCGATGTCCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCYIKYQPFTFCRISLNFKFQLL*FDVLWL Trigger: CAGCCACAGGACATCGAAGCAGAGAAGCTGAAACTT...GAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
||
| CDS-3UTR CCA 90 bp | ACACAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATCAACGAGCTTCATGTTaGCCTTCATCCTCTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TQCYIKYQPFTFCRISLNQRASC*PSSSSF Trigger: AAAGGAAGAGGATGAAGGCCAACATGAAGCTCGTTG...ATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CCA 90 bp | ACACAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATCTCAATCTCAAATTCTaGGCTCTGAGGATCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TQCYIKYQPFTFCRISLNLNLKF*ALRIPF Trigger: GAAAGGGATCCTCAGAGCCCAGAATTTGAGATTGAG...ATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CAA 72 bp | ACACAAAGTGAATTCGTGCAACCACTTGCAACTTTGTaGTGCATGAGAAAGTACACTACTGAAATAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: TQSEFVQPLATL*CMRKYTTEINH Trigger: GTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTGCACGAATTCACTTTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR TCA 90 bp | ACACAATGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATCATCTATGTCTTCAGTaGGAGAGTCATCTAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: TQCYIKYQPFTFCRISLNHLCLQ*ESHLDQ Trigger: CTGATCTAGATGACTCTCTCACTGAAGACATAGATG...ATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCATTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR GCA 90 bp | CAACCACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTGAAATAAACCACAAATCTGCCACATTCTaGCACTCAAAATTTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: QPLATLLCMRKYTTEINHKSATF*HSKFAS Trigger: TGATGCAAATTTTGAGTGGCAGAATGTGGCAGATTT...GTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR GCA 90 bp | CAACCACTTGCAACTTTGTTGTGCATGAGAAAGTACACTACTGAAATAAACCACTCAAACTTCAAAAATTaGAGCCGATCTTTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPLATLLCMRKYTTEINHSNFKN*SRSFSS Trigger: GCTGGAAAAAGATCGGCTGCAATTTTTGAAGTTTGA...GTGGTTTATTTCAGTAGTGTACTTTCTCATGCACAACAAAGTTGCAAGTGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| 3UTR CAA 72 bp | TCATTGGGTTCCACATCATGGATTTCTGTTACCTTTTaGGCACTGGTACCATTTTTACTAGCTTCTATCATT | + |
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Preference number: 4 (lower is better) Translates to: SLGSTSWISVTF*ALVPFLLASII Trigger: AATGATAGAAGCTAGTAAAAATGGTACCAGTGCCAAAAAGGTAACAGAAATCCATGATGTGGAACCCAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 90 bp | CGCTCGTGCTCCAGGTCCAGGTGGCGCAGGCGCTCTTTCTCTATCTaGAGCCGCTCCTTTTCCACCTGCAGCCTTTCCGCCTCAATATCA | + |
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Preference number: 5 (lower is better) Translates to: RSCSRSRWRRRSFSI*SRSFSTCSLSASIS Trigger: TGATATTGAGGCGGAAAGGCTGCAGGTGGAAAAGGAGCGGCTGCAGATAGAGAAAGAGCGCCTGCGCCACCTGGACCTGGAGCACGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS CCA 90 bp | TTCTCTGCTTCGATGTCCTGTGGCTGCAGCATGGACTTCTCGCCCTaGCCCAGCTCGTTCTCTAGAGCCGGTTTCTCGGTGCTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: FSASMSCGCSMDFSP*PSSFSRAGFSVLTS Trigger: GCTGGTCAGCACCGAGAAACCGGCTCTAGAGAACGAGCTGGGCCAGGGCGAGAAGTCCATGCTGCAGCCACAGGACATCGAAGCAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 90 bp | TTCTCGGTGCTGACCAGCTGCAGCCTCCACTTTTCTCTCTCGATCTaGAGCCTCTCCTTCTCCAGCTGTAAGCGCTCGTGCTCCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FSVLTSCSLHFSLSI*SLSFSSCKRSCSRS Trigger: GGACCTGGAGCACGAGCGCTTACAGCTGGAGAAGGAGAGGCTGCAGATCGAGAGAGAAAAGTGGAGGCTGCAGCTGGTCAGCACCGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 90 bp | TGGCCCAGCTCGTTCTCTAGAGCCGGTTTCTCGGTGCTGACCAGCTaGAGCCTCCACTTTTCTCTCTCGATCTGCAGCCTCTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: WPSSFSRAGFSVLTS*SLHFSLSICSLSFS Trigger: GGAGAAGGAGAGGCTGCAGATCGAGAGAGAAAAGTGGAGGCTGCAGCTGGTCAGCACCGAGAAACCGGCTCTAGAGAACGAGCTGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 90 bp | CGTTCGCGCTCAAGTTTCAGCTTCTCTGCTTCGATGTCCTGTGGCTaGAGCATGGACTTCTCGCCCTGGCCCAGCTCGTTCTCTAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RSRSSFSFSASMSCG*SMDFSPWPSSFSRA Trigger: GGCTCTAGAGAACGAGCTGGGCCAGGGCGAGAAGTCCATGCTGCAGCCACAGGACATCGAAGCAGAGAAGCTGAAACTTGAGCGCGAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 90 bp | ACCAACGAGCTTCATGTTGGCCTTCATCCTCTTCCTTTTCATGAGTaGGCGCCAGTCCAGGTAACGTCTCTTAACCTCTGTGCCTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: TNELHVGLHPLPFHE*APVQVTSLNLCACP Trigger: AGGACAGGCACAGAGGTTAAGAGACGTTACCTGGACTGGCGCGCACTCATGAAAAGGAAGAGGATGAAGGCCAACATGAAGCTCGTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS CCA 90 bp | CTCTATGTTCATGAGCAGATGGGGCTCATCATAGGTGGGTCTGGATaGTGTGGAATTGAGGGTGAAAAACTCATCAATGTGAGGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: LYVHEQMGLIIGGSG*CGIEGEKLINVREV Trigger: GACTTCCCTCACATTGATGAGTTTTTCACCCTCAATTCCACACCATCCAGACCCACCTATGATGAGCCCCATCTGCTCATGAACATAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CAA 90 bp | GACACTGTGGGCAAATCAGCAGGCGAAGTCTGCCCTTTGCATTTAGAATTCCCACTGGATGGTGTGGAATaGAGGGTGAAAAACTCATCA | + |
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Preference number: 5 (lower is better) Translates to: DTVGKSAGEVCPLHLEFPLDGVE*RVKNSS Trigger: TGATGAGTTTTTCACCCTCAATTCCACACCATCCAG...TGGGAATTCTAAATGCAAAGGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CAA 90 bp | TCTGAATTTCAGATTCTGGAGTCAGAAGGTACCTTTTCACAGACTCCTGTAGATCCAACGAGCTTCATGTaGGCCTTCATCCTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SEFQILESEGTFSQTPVDPTSFM*AFILFL Trigger: AAGGAAGAGGATGAAGGCCAACATGAAGCTCGTTGG...ATCTACAGGAGTCTGTGAAAAGGTACCTTCTGACTCCAGAATCTGAAATTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CAA 90 bp | TGCTATATAAAGTATCAGCCGTTTACTTTCTGCAGGATTTCTCTGAATTTCAGACCAACGAGCTTCATGTaGGCCTTCATCCTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CYIKYQPFTFCRISLNFRPTSFM*AFILFL Trigger: AAGGAAGAGGATGAAGGCCAACATGAAGCTCGTTGG...TCTGAAATTCAGAGAAATCCTGCAGAAAGTAAACGGCTGATACTTTATATAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CAA 90 bp | AGATGCACAGTTAGGCCAAGTGTACAGTTTTTCAAACTTGGCACTAATGACATCTCTGCCACTCAAAATTaGCATCATTTCGGAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: RCTVRPSVQFFKLGTNDISATQN*HHFGRQ Trigger: TTGCCTTCCGAAATGATGCAAATTTTGAGTGGCAGA...GATGTCATTAGTGCCAAGTTTGAAAAACTGTACACTTGGCCTAACTGTGCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS-3UTR CAA 90 bp | GCAGTATTACTAATGTGGAAGTGCCTATCAGATCCTCTGCTATTCTGTTTGTGTTCTGCCACTCAAAATTaGCATCATTTCGGAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: AVLLMWKCLSDPLLFCLCSATQN*HHFGRQ Trigger: TTGCCTTCCGAAATGATGCAAATTTTGAGTGGCAGA...ACACAAACAGAATAGCAGAGGATCTGATAGGCACTTCCACATTAGTAATACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 72 bp | ATCTGCAGCCTCTCCTTCTCCAGCTGTAAGCGCTCGTaGTCCAGGTCCAGGTGGCGCAGGCGCTCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ICSLSFSSCKRS*SRSRWRRRSFS Trigger: AGAGAAAGAGCGCCTGCGCCACCTGGACCTGGAGCACGAGCGCTTACAGCTGGAGAAGGAGAGGCTGCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS CCA 72 bp | TCGATGTCCTGTGGCTGCAGCATGGACTTCTCGCCCTaGCCCAGCTCGTTCTCTAGAGCCGGTTTCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SMSCGCSMDFSP*PSSFSRAGFSV Trigger: CACCGAGAAACCGGCTCTAGAGAACGAGCTGGGCCAGGGCGAGAAGTCCATGCTGCAGCCACAGGACATCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 72 bp | CTGACCAGCTGCAGCCTCCACTTTTCTCTCTCGATCTaGAGCCTCTCCTTCTCCAGCTGTAAGCGCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: LTSCSLHFSLSI*SLSFSSCKRSC Trigger: GCACGAGCGCTTACAGCTGGAGAAGGAGAGGCTGCAGATCGAGAGAGAAAAGTGGAGGCTGCAGCTGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS CCA 72 bp | TCAGCTTCTCTGCTTCGATGTCCTGTGGCTGCAGCATaGACTTCTCGCCCTGGCCCAGCTCGTTCTCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SASLLRCPVAAA*TSRPGPARSLE Trigger: CTCTAGAGAACGAGCTGGGCCAGGGCGAGAAGTCCATGCTGCAGCCACAGGACATCGAAGCAGAGAAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 72 bp | TCAAGTTTCAGCTTCTCTGCTTCGATGTCCTGTGGCTaGAGCATGGACTTCTCGCCCTGGCCCAGCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SSFSFSASMSCG*SMDFSPWPSSF Trigger: GAACGAGCTGGGCCAGGGCGAGAAGTCCATGCTGCAGCCACAGGACATCGAAGCAGAGAAGCTGAAACTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS CAA 90 bp | AGATCAGACGTGGGCAGAGGAAACCCAGAACCAACGAGCTTCATGTaGGCCTTCATCCTCTTCCTTTTCATGAGTGCGCGCCAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSDVGRGNPEPTSFM*AFILFLFMSARQSR Trigger: CCTGGACTGGCGCGCACTCATGAAAAGGAAGAGGATGAAGGCCAACATGAAGCTCGTTGGTTCTGGGTTTCCTCTGCCCACGTCTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS CAA 72 bp | GTGGGCAGAGGAAACCCAGAACCAACGAGCTTCATGTaGGCCTTCATCCTCTTCCTTTTCATGAGTGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: VGRGNPEPTSFM*AFILFLFMSAR Trigger: GCGCGCACTCATGAAAAGGAAGAGGATGAAGGCCAACATGAAGCTCGTTGGTTCTGGGTTTCCTCTGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 72 bp | CGCTCTTTCTCTATCTGCAGCCGCTCCTTTTCCACCTaGAGCCTTTCCGCCTCAATATCAAGTCGGCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RSFSICSRSFST*SLSASISSRRF Trigger: AAAACGCCGACTTGATATTGAGGCGGAAAGGCTGCAGGTGGAAAAGGAGCGGCTGCAGATAGAGAAAGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS TCA 72 bp | AGTCAGGGAGCTCGTTTTCCCTCCTGGAATCTGGTATaGCAGATGACAGCATCTCTTCCTCCTCCTCAATCT | + |
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Preference number: 6 (lower is better) Translates to: SQGARFPSWNLV*QMTASLPPPQS Trigger: AGATTGAGGAGGAGGAAGAGATGCTGTCATCTGTCATACCAGATTCCAGGAGGGAAAACGAGCTCCCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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| CDS GCA 72 bp | CTTCATGTTGGCCTTCATCCTCTTCCTTTTCATGAGTaGGCGCCAGTCCAGGTAACGTCTCTTAACCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LHVGLHPLPFHE*APVQVTSLNLC Trigger: ACAGAGGTTAAGAGACGTTACCTGGACTGGCGCGCACTCATGAAAAGGAAGAGGATGAAGGCCAACATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047173.10 ENSMUST00000212075.2 |
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